mRNA_S-dermatodea_contig9155.17223.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9155.17223.1
Unique NamemRNA_S-dermatodea_contig9155.17223.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig9155.17223.1 vs. uniprot
Match: D7FR59_ECTSI (Vps53_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR59_ECTSI)

HSP 1 Score: 962 bits (2487), Expect = 0.000e+0
Identity = 492/576 (85.42%), Postives = 523/576 (90.80%), Query Frame = 1
Query:    1 AQVPRIAELRETVTGIKNELVEQTSQAFNQVGQLASSTADPEGFQRDADKPGQFRSLHEACLVVDALGGQARQQQIESFCDQQMQPYEPLFPQGSTQAQLDQIDRRFAWFRRLLRGVDLRFDGVFPKHWRLQHRLCMRFLAQTRAGLVEILEGGSKEAEDVTILLKASQHLHRHLYRAVHKCLAFENEAHSRFEGNDQDNRGATEVELDGEGNLIDPNSAEGIKRKYAKAARDDERDSSNP-RGAPKSLFATLSADGEGVRDEVEGSLPTIVGVLSGVFEPFMGPYIAFERRNLDDRISAASRTAGSTDDDIDRDHKLPVFSTSVNIFVCMKNSIKRCTKFTTGQTFFDLHHEYKSCLREYASLLQAKLPAAQAATGQQHRLVDGGESTVCYVVNTAEYCADILPQLEEMIKSNMDASFTDKVDLTEEQEPYYNVITQAILVLVSGLETRVEPAFRSMSAINWGSCEMVGEESHYVRSIHDAFQSFVPGIRSLLSTLYFRNFCDKMVTSFLPSFLSLILRQRRVNEMGTQQLLLDVYNLKTLMLKVPSLGLDPLQSTPVPVSYTKYVTKHMSKIEM 1725
            +QVPRIAELRETVTGIKNELVEQTSQAFNQVGQLASSTADPEGF+RDADKPGQFRSL EACLVVDALGGQARQQQIESFC+QQMQPY+PLFPQGSTQAQLDQIDRRFAWFRRLLRGVDLRFDGVFP+HWRLQHRLCMRFL QTR  L EIL+GGSKEAEDVT+LLKA           VHKCLAFENEAHSRFEG + ++R A EVELD EGNLIDPNSAEGIK+KYA A+R ++RDS+   RG PKSL+A LSADGEGVRDEVEGSLP IVG+LSGVFEPFMGPYIAFERRNLDD I AA+RT G ++DDIDRD KLPVFSTSVNIFV +KNSI+RCTKFTTGQTFFDLH EYKSCLR YA+LL AKLP AQ    QQ  LVDGGE TVCYV+NTAEYCADILPQLE+M+KS MDASF +KVDL EEQEPYYNVITQA+ VLVSGLETRVEPAFR+MS INWG+CEMVGEESHYVRSIHDAFQSFVP IRSLLST+YFRNFCDKMVTSFLPSFLSLILRQRRVNEMGTQQLLLDVYNLKTLMLKVPSLGLD LQSTPVPVSYTKYVTKHMSKIEM
Sbjct:  168 SQVPRIAELRETVTGIKNELVEQTSQAFNQVGQLASSTADPEGFERDADKPGQFRSLQEACLVVDALGGQARQQQIESFCNQQMQPYDPLFPQGSTQAQLDQIDRRFAWFRRLLRGVDLRFDGVFPRHWRLQHRLCMRFLGQTRTALAEILDGGSKEAEDVTVLLKA-----------VHKCLAFENEAHSRFEGKEDESRQAKEVELDAEGNLIDPNSAEGIKQKYANASRGNDRDSTTVGRGVPKSLYAPLSADGEGVRDEVEGSLPPIVGMLSGVFEPFMGPYIAFERRNLDDLIKAAARTTGPSNDDIDRDRKLPVFSTSVNIFVYIKNSIQRCTKFTTGQTFFDLHQEYKSCLRAYANLLLAKLPTAQGTAVQQQHLVDGGEVTVCYVINTAEYCADILPQLEDMVKSKMDASFKEKVDLAEEQEPYYNVITQAVRVLVSGLETRVEPAFRAMSGINWGTCEMVGEESHYVRSIHDAFQSFVPSIRSLLSTMYFRNFCDKMVTSFLPSFLSLILRQRRVNEMGTQQLLLDVYNLKTLMLKVPSLGLDQLQSTPVPVSYTKYVTKHMSKIEM 732          
BLAST of mRNA_S-dermatodea_contig9155.17223.1 vs. uniprot
Match: A0A836CNS0_9STRA (Vps53-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNS0_9STRA)

HSP 1 Score: 580 bits (1494), Expect = 5.480e-196
Identity = 321/586 (54.78%), Postives = 403/586 (68.77%), Query Frame = 1
Query:    1 AQVPRIAELRETVTGIKNELVEQTSQAFNQVGQLASSTADPEGFQR-DADKPGQFRSLHEACLVVDALGGQARQQQIESFCDQQMQPYEPLFPQGSTQ----AQLDQIDRRFAWFRRLLRGVDLRFDGVFPKHWRLQHRLCMRFLAQTRAGLVEILEGGSKEAE-DVTILLKASQHLHRHLYRAVHKCLAFENEAHSRFEGNDQDNRGATEVELDGEGNLIDPNSAEGIKRKYAKAARDDERDSSNPRGAPKSLFATLSADGEGVRDEVEGSLPTIVGVLSGVFEPFMGPYIAFERRNLDDRISAASRTAGSTDDDIDRDHKLPVFSTSVNIFVCMKNSIKRCTKFTTGQTFFDLHHEYKSCLREYASLLQAKLP----AAQAATGQQHRLVDGGESTVCYVVNTAEYCADILPQLEEMIKSNMDASFTDKVDLTEEQEPYYNVITQAILVLVSGLETRVEPAFRSMSAINWGSCEMVGEESHYVRSIHDAFQSFVPGIRSLLSTLYFRNFCDKMVTSFLPSFLSLILRQRRVNEMGTQQLLLDVYNLKTLMLKVPSLGLDP-LQSTPVPVSYTKYVTKHMSKIEM 1725
            A VPRIAELR TV  +K +L  Q + AF+ VGQLA  +AD E  +R  AD PGQFR LHEACLVVDALG +AR QQ+ +FC QQ++ Y+ LFP  S      A  + +DRRFAWFRRLLR VD+R +GVFP HW L  RLC+ F+ +TRA L+E+L GGS EA  DV  LLK  Q           KCL FE EA +RFE        A   +  GEG       + G  +++ +   + ER   +    P S   +LS DG+GV +E E  L  I G+LSGVF+P+MGPYIA E++ L + ++AA+R  G   +DIDRD KLPV STSVN FV +KNSI RCTK TTGQTFF L+ E+K  +  YA+ L+AKLP           QQ R+ D GE  VCYV+NTAEYCA+ LPQLEE+IKS +D S+ D +DLT EQ+ +++VI QAI VL  GLETR EPAFR+MSAINWG+CE VGEES Y+R+I DA   F+P +R+LLSTLYFR FCDK   SFLP++L+L+LRQRR+NEMGTQQLLLD YNLKTLML++P LGL+   +++P+P++Y+KYV K M KIEM
Sbjct:  162 AAVPRIAELRNTVAAVKRDLTSQITAAFDAVGQLAPGSADLEALERVPADIPGQFRPLHEACLVVDALGAKARSQQVAAFCRQQLKQYDTLFPPSSVAGPGAAGPESMDRRFAWFRRLLRSVDVRCEGVFPPHWHLPQRLCLAFMERTRASLLEVLGGGSGEAAGDVQALLKTLQ-----------KCLNFEKEACARFET-------AAGGDAQGEGGEGGAPLSPGASQEHRQRRSEGERQMPDTVVVPASKLISLSKDGQGVAEEGEEPLLPIAGMLSGVFDPYMGPYIALEKKKLGEVMAAAAR--GRDLEDIDRDGKLPVLSTSVNAFVYIKNSINRCTKLTTGQTFFKLYKEFKGSMSGYAATLKAKLPPPVSGGSVGLSQQFRIPDDGEVAVCYVINTAEYCAETLPQLEEIIKSKIDLSYKDSIDLTPEQDQFHDVIMQAIRVLHIGLETRAEPAFRAMSAINWGACESVGEESGYIRAIEDAITPFIPTVRNLLSTLYFRTFCDKFAGSFLPAYLALLLRQRRINEMGTQQLLLDAYNLKTLMLRLPILGLEAGAETSPIPLTYSKYVIKQMGKIEM 727          
BLAST of mRNA_S-dermatodea_contig9155.17223.1 vs. uniprot
Match: A0A7S2W1C4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1C4_9STRA)

HSP 1 Score: 483 bits (1244), Expect = 6.710e-158
Identity = 269/582 (46.22%), Postives = 376/582 (64.60%), Query Frame = 1
Query:    4 QVPRIAELRETVTGIKNELVEQTSQAFNQVGQLASSTADPEGFQRDADKPGQFRSLHEACLVVDALGGQARQQQIESFCDQQMQPYEPL--FPQGSTQAQLDQIDRRFAWFRRLLRGVDLRFDGVFPKHWRLQHRLCMRFLAQTRAGLVEILEGGSKEAEDVTILLKASQHLHRHLYRAVHKCLAFENEAHSRFEGNDQDNRGATEVELDGEGNLIDPNSAEGIKRKYAKAARDDERDSSNPRGAPKSLFATLSADGEGVRDEVEG----SLPTIVGVLSGVFEPFMGPYIAFERRNLDDRISAASRTAGSTDDDIDRDHKLPVFSTSVNIFVCMKNSIKRCTKFTTGQTFFDLHHEYKSCLREYASLLQAKLPAAQAATGQQHRLVDGGESTVCYVVNTAEYCADILPQLEEMIKSNMDASFTDKVDLTEEQEPYYNVITQAILVLVSGLETRVEPAFRSMSAINWGSCEMVGEESHYVRSIHDAFQSFVPGIRSLLSTLYFRNFCDKMVTSFLPSFLSLILRQRRVNEMGTQQLLLDVYNLKTLMLKVPSLGLDPLQSTP---VPVSYTKYVTKHMSKIE 1722
            +VP++ E+  TV  IK  L E+  QAF +VG LA S+ DPEGF+ ++ + G F SL EAC+VVDALG  A ++QI +  D Q++PY  L  F +G   A LDQIDRRF+WFRR LR V+ +F+ VFP+HW++ HR C+ FLA+T+  ++E+L  G  E E+VT+LLKA Q           K L FE +   RFEG+     G    +LD  GN+IDP SAEGI+RKY    R                      +  GV    +      L  IVG+LS VF+PFMGPYIA E+ N++D +    +     ++ +++D  LPV+++SV +FV +KN++KRCT  T GQTFF LH E+KS L  Y  +LQ K+   +   G+ +      E  VCYVVNTAEYC++ +PQLEE+IK  +  ++ D+VDL  +QE +++VI +A+  LV+GL+ ++EPAFRSM++ NWGS EM  EES YVR+++ A   +VP  R++LS+LYFRNFCDK   +F P FL+L+L+Q+R++E GTQQLLLDVYNLK +ML++P +G +  +  P   VP+SY KYV KHMSK+E
Sbjct:  183 EVPKVKEISHTVDEIKARLTEEILQAFTRVGSLAQSSCDPEGFRDESAEAGDFASLTEACMVVDALGPDAARKQINAIVDDQLKPYRTLGEFKRGGDAASLDQIDRRFSWFRRTLREVETKFEKVFPQHWKVPHRFCIAFLAETKGHILELLGSGDPEVENVTLLLKALQ-----------KSLMFEKDMQMRFEGS----LGEDMPDLDEAGNVIDPGSAEGIRRKYQ---RQXXXXXXXXXXXXXXXXXFAGEETSGVLTTAKALHAEQLSRIVGLLSSVFDPFMGPYIALEKSNMEDMLLKVIQ-----EEQVEQDGALPVYTSSVQLFVYIKNAVKRCTALTAGQTFFKLHLEFKSTLATYVEILQKKMTQDK---GENY------ERDVCYVVNTAEYCSETIPQLEELIKQKIAPAYRDRVDLGPQQELFFDVIAEAVRNLVAGLQAQMEPAFRSMASTNWGSHEMGDEESPYVRTVNLAALKYVPTCRTVLSSLYFRNFCDKFAAAFCPGFLNLVLKQKRISEEGTQQLLLDVYNLKRMMLELPRVGQE--EDEPEFNVPLSYKKYVDKHMSKVE 730          
BLAST of mRNA_S-dermatodea_contig9155.17223.1 vs. uniprot
Match: A0A7S2G306_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G306_9STRA)

HSP 1 Score: 431 bits (1108), Expect = 7.480e-141
Identity = 252/565 (44.60%), Postives = 341/565 (60.35%), Query Frame = 1
Query:    1 AQVPRIAELRETVTGIKNELVEQTSQAFNQVGQLASSTADPEGFQRDADKPGQFRSLHEACLVVDALGGQARQQQIESFCDQQMQPYE--PLFPQGSTQAQLDQIDRRFAWFRRLLRGVDLRFDGVFPKHWRLQHRLCMRFLAQTRAGLVEILEGGSKEAEDVTILLKASQHLHRHLYRAVHKCLAFENEAHSRFE--------GNDQDNRGATEVELDGEGNLIDPNSAEGIKRKYAKAARDDERDSSNPRGAPKSLFATLSADGEGVRDEVEGSLPTIVGVLSGVFEPFMGPYIAFERRNLDDRISAASRTAGSTDDDIDRDHKLPVFSTSVNIFVCMKNSIKRCTKFTTGQTFFDLHHEYKSCLREYASLLQAKLPAAQ---AATGQQHRLVDGGESTVCYVVNTAEYCADILPQLEEMIKSNMDASFTDKVDLTEEQEPYYNVITQAILVLVSGLETRVEPAFRSMSAINWGSCEMVGEESHYVRSIHDAFQSFVPGIRSLLSTLYFRNFCDKMVTSFLPSFLSLILRQRRVNEMGTQQLLLDVYNLKTLMLKVPSLGLDP 1656
            A +P+I ELR  V  IK  L +  + AFN   Q  +S +       ++  P     L +AC VVDALG  A +QQI S   Q + PY+  P F +G   AQLDQIDRRF+WFRRLL+ VD++F+G+FP HW L HRL + FL  TR  ++E+L  G  + E+VT+LLKA Q           + + FE      FE        G+  D R     +LD +GN++DP SA GIK KY +  R  +  S              + +GE    + +  LP +VGVLS VF+PFMGPYI+ ER N++D +          D+ ++    LP++++SV  F  +KNS+KRC   T GQTFF L  E+K CL  Y  LL  K+ +      ++      V GG+  +CY VNTAEYCAD +PQLEE+IKS +DAS+  K+DLT EQ+ +Y+VI  AI  LV GLE +VEPA +SM+AINWG+  +VGEES+YVR+IH A  ++VP  RS L+ LYFRNFCDK   + +P FL+LIL+ +R+ E GTQQLLLDVYNLK  M+++P +G  P
Sbjct:  103 ADIPKIKELRVRVDEIKALLSDGINGAFNDALQFDASDSITGSLVGESSSP----ILSDACFVVDALGPSAVEQQISSVVTQLLTPYKNIPDFQRGGDAAQLDQIDRRFSWFRRLLKDVDVKFEGLFPPHWTLSHRLVIEFLQHTRIQILELLGSGDPQVENVTVLLKALQ-----------RTIQFEKSMKDAFEPAGGPGPCGDVSDER----PDLDDDGNVVDPLSALGIKMKYERINRAIQNQS----------HGNANTNGE---SQTQQQLPPLVGVLSKVFDPFMGPYISLERNNMNDMMRKLIE-----DEKVEEGGPLPLYTSSVQTFAYIKNSVKRCIALTNGQTFFKLQQEFKECLANYVELLGQKMTSCMQKMTSSCTMDAAVLGGKE-ICYTVNTAEYCADTVPQLEELIKSKIDASYRAKIDLTAEQDLFYDVIAAAIRNLVGGLEAKVEPALKSMAAINWGTYSIVGEESNYVRTIHSAVAAYVPMCRSALTPLYFRNFCDKFAAALIPKFLNLILKMKRITEEGTQQLLLDVYNLKKTMMELPIIGGTP 629          
BLAST of mRNA_S-dermatodea_contig9155.17223.1 vs. uniprot
Match: A0A4D9D4L4_9STRA (Vps53_N domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4L4_9STRA)

HSP 1 Score: 420 bits (1080), Expect = 4.020e-134
Identity = 249/594 (41.92%), Postives = 352/594 (59.26%), Query Frame = 1
Query:    1 AQVPRIAELRETVTGIKNELVEQTSQAFNQVGQLASSTADPEGFQRDADKPGQFRSLHEACLVVDALGGQARQQQIESFCDQQMQPYEPLFPQGSTQAQLDQIDRRFAWFRRLLRGVDLRFDGVFPKHWRLQHRLCMRFLAQTRAGLVEILEGGSKEAEDVTILLKASQHLHRHLYRAVHKCLAFENEAHSRFEGNDQDNRGATEVELDGEGNLIDPNSAEGIKRKYAKAARDDERDSSNPRGAPKSLFATLSADGEGVRDEVEGSLPTIVGVLSGVFEPFMGPYIAFERRNLDDRISAASRTAGSTDDDIDRD----HKLPVFSTSVNIFVCMKNSIKRCTKFTTGQTFFDLHHEYKSCLREYASLLQAKLPAAQAATG---------QQHRLVDGGESTVCYVVNTAEYCADILPQLEEMIKSNMDASFTDKVDLTEEQEPYYNVITQAILVLVSGLETRVEPAFRSMSAINWGSCEMVGEESHYVRSIHDAFQSFVPGIRSLLSTLYFRNFCDKMVTSFLPSFLSLILRQRRVNEMGTQQLLLDVYNLKTLMLKVPSLGLD-------PLQSTPVPVSYTKYVTKHMSKIE 1722
            A +P+IAE+++T+  I  +L +Q +QAF++V  L+ + A+P   QR+   PG F SL EAC VVDALG  AR+  I+ FC++Q+ PY   FP+G   + L++I+RRFAW RR L+ V+ RF GVFP HW+++  L M FL  TR  +++ LE G  E+EDVT+LLKA Q           K L FE E   RF+   QD+  +    L        P   E    +YA  A+D +        A +   A L A           ++  I+GV+SGVF+PFMGPYI  E+RN+++ +  A       +D +DR      KLPVFS+S+ +FV +K +IKRCT  TT  TFF L  E+K+CL  YA  L+ KLP A  ++            ++L +GGE                   LEEM++S +D S+ + V  + E + +++ IT AI VL+SGLE + E A ++M  +NW +CE VGEES YVR+I+DA +++VP +R LLS +YFRNFCDK   SFLP+++ ++ R +R+NEMGTQQLLLDVYNLKTL+L++P +GL        P  ST  P +Y KYV K  +KIE
Sbjct:  197 ASMPKIAEIKQTIGRINTQLNDQITQAFSEVAALSYTVANPSQLQREDVSPGFFSSLTEACQVVDALGPAARKVHIDDFCNRQLAPYLKAFPKGGEASSLEKIERRFAWCRRALKNVEERFHGVFPAHWKVELCLLMAFLQTTRQHILDTLEAGGPESEDVTVLLKALQ-----------KALLFEKEMQPRFQPT-QDSHSSLSHPLP-------PALQEEETSQYAALAKDGK--------AAEQKKAVLDA----------AAVLPILGVVSGVFDPFMGPYIDLEKRNMEEMLEKAL-----AEDQVDRSLNAGTKLPVFSSSITLFVYIKTAIKRCTALTTSATFFILAKEFKACLLSYARALRGKLPPANPSSXXXXXXXXAVSSYKLAEGGEV-----------------DLEEMVRSKIDPSYAESVSFSTEVDAFHDTITLAIRVLISGLEGKYESAVKAMLTLNWAACEGVGEESAYVRAINDAVRAYVPSVRDLLSQIYFRNFCDKFAQSFLPNYMDVLFRLKRINEMGTQQLLLDVYNLKTLLLQLPIIGLPSTMDDAAPGVSTSAPPAYVKYVAKQFAKIE 731          
BLAST of mRNA_S-dermatodea_contig9155.17223.1 vs. uniprot
Match: H3GT71_PHYRM (Vps53_N domain-containing protein n=27 Tax=Peronosporaceae TaxID=4777 RepID=H3GT71_PHYRM)

HSP 1 Score: 414 bits (1064), Expect = 1.300e-131
Identity = 238/592 (40.20%), Postives = 351/592 (59.29%), Query Frame = 1
Query:    1 AQVPRIAELRETVTGIKNELVEQTSQAFNQVGQLASSTADPEGFQRDADKPGQFRSLHEACLVVDALGGQARQQQIESFCDQQMQPYEPLFPQGSTQAQLDQIDRRFAWFRRLLRGVDLRFDGVFPKHWRLQHRLCMRFLAQTRAGLVEILEGGSKEAEDVTILLKASQHLHRHLYRAVHKCLAFENEAHSRFEGNDQDNRGATEVELDGEGNLIDPNSAEGIKRKYAKAARDDERDSSNPRGAPKSLFATLSADGEGVRDEVEGSLPTIVGVLSGVFEPFMGPYIAFERRNLDDRISAASRTAGSTDDDIDRDHKLPVFSTSVNIFVCMKNSIKRCTKFTTGQTFFDLHHEYKSCLREYASLLQAKLPAAQAATG-----------QQHRLVDGGESTVCYVVNTAEYCADILPQLEEMIKSNMDASFTDKVDLTEEQEPYYNVITQAILVLVSGLETRVEPAFRSMSAINWGSCEMVGEESHYVRSIHDAFQSFVPGIRSLLSTLYFRNFCDKMVTSFLPSFLSLILRQRRVNEMGTQQLLLDVYNLKTLMLKVPSLGLDPLQSTPVPVS-------YTKYVTKHMSKIE 1722
            + V +I EL +TV  ++ EL  Q    F  +G + S     + F  + ++   F +L  AC VVDALG   R++ I  FCD+Q+ PYE L+ +G   A L Q + R+ WF  LL G+D R + VFPKHWR+  R+C++F   TR  L+  +   + +  DVT+LLK+ Q           + L FE +A  RFEG  +      ++ELD  G +IDP+SAEGIKRK+ +  R+ ER         K+L   +  +GE   D  + SLPTI G++S  F+PFM  Y+A ER+N++  I+          + +DR+ +LPVFS+SVN+F  ++NSIKRCT  T GQTFFDL  E+K C R Y+  L  KLPAA  A+             + +L +  E  +C+V+NTAEYCA+ LP LEE+I+S +D +F++ ++L++E + +++V   A+  +VSGLET ++    ++  +NW + E VG+ES YV  + +  + FVP +R +LS LYF NFCDK   SF+P  L  +++ R+VN++ TQQLLLDVY LKTL L++P L  D   S+ +P S       YTK+V   M K+E
Sbjct:  196 SNVSKIVELHKTVRTLQEELGGQIFADFRSIGPMESLE---DNFPSEEERKAVFANLSAACAVVDALGKVTREKLIHLFCDEQLMPYERLYGEGGECAGLHQAETRYTWFYNLLNGIDDRLNAVFPKHWRMARRMCIQFCECTRTHLLAQIGAHTPDEMDVTLLLKSLQ-----------RTLMFERDAAQRFEGVAEGEE-QEDMELDENGEIIDPHSAEGIKRKHRRKKREAER---------KALEEEMERNGELAGDNSQ-SLPTIRGLISRSFDPFMTAYVALERKNMEQMINEVMSA-----ELVDRNGQLPVFSSSVNMFAYIRNSIKRCTALTNGQTFFDLQSEFKHCFRLYSQRLHEKLPAASTASAGGLDSSSSSASSKVKLGEKQEEELCFVINTAEYCAETLPSLEEVIRSKIDKAFSEAIELSQEIDTFHDVGAAAMKCIVSGLETSLDDELSALHKVNWQTWEAVGDESLYVTQMGEKLRVFVPVLRQMLSGLYFTNFCDKFAASFVPKILQAVMKCRKVNQVATQQLLLDVYALKTLFLQLPVLSNDAFPSSSLPTSTATIPSRYTKFVANEMGKVE 757          
BLAST of mRNA_S-dermatodea_contig9155.17223.1 vs. uniprot
Match: A0A3F2REQ9_9STRA (Vps53_N domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2REQ9_9STRA)

HSP 1 Score: 413 bits (1061), Expect = 4.530e-131
Identity = 235/592 (39.70%), Postives = 350/592 (59.12%), Query Frame = 1
Query:    1 AQVPRIAELRETVTGIKNELVEQTSQAFNQVGQLASSTADPEGFQRDADKPGQFRSLHEACLVVDALGGQARQQQIESFCDQQMQPYEPLFPQGSTQAQLDQIDRRFAWFRRLLRGVDLRFDGVFPKHWRLQHRLCMRFLAQTRAGLVEILEGGSKEAEDVTILLKASQHLHRHLYRAVHKCLAFENEAHSRFEGNDQDNRGATEVELDGEGNLIDPNSAEGIKRKYAKAARDDERDSSNPRGAPKSLFATLSADGEGVRDEVEGSLPTIVGVLSGVFEPFMGPYIAFERRNLDDRISAASRTAGSTDDDIDRDHKLPVFSTSVNIFVCMKNSIKRCTKFTTGQTFFDLHHEYKSCLREYASLLQAKLPAAQAATG-----------QQHRLVDGGESTVCYVVNTAEYCADILPQLEEMIKSNMDASFTDKVDLTEEQEPYYNVITQAILVLVSGLETRVEPAFRSMSAINWGSCEMVGEESHYVRSIHDAFQSFVPGIRSLLSTLYFRNFCDKMVTSFLPSFLSLILRQRRVNEMGTQQLLLDVYNLKTLMLKVPSLGLDPLQSTP-------VPVSYTKYVTKHMSKIE 1722
            A V +I EL +TV  ++ EL  Q    F  +G + S     E F  + ++   F +L  AC VVDALG   R++ I SFCD+Q+ PYE ++ +G   A L Q + R+ WF  LL  +D R + VFPKHWR+  R+C++F   TR  L+  +   + +  DVT+LLK+ Q           + L FE +A  RFEG  +      E++LD  G+ IDP SAEGIKRK+ +  R+ ER         K+L   +  +G    D  + SLPTI G++S  F+PFM  Y+A ER+N++  I+          + +DR+ +LPVFS+SVN+F  ++NSIKRCT  T GQTFFDL  E+K C + Y+  L  KLP A A T             + +L D  E  +C+V+NTAEYCA+ LP LEE+I++ +D +F++ ++L++E + +++V   A+  +V+GLET ++    ++  +NW + E VG+ES YV  + +  ++FVP +R +LS LYF NFCDK   SF+P  L  +++ R+VN++ TQQLLLDVY LKTL L++P+L  D   S+        +P  YTK+VT  + K+E
Sbjct:  206 ANVTKIVELHKTVRTLQEELGGQIFADFRSIGPMESLE---ENFPSEEERKAVFANLSTACAVVDALGNATREKLIRSFCDEQLVPYERMYGEGGECAGLQQAETRYTWFYNLLATIDDRLNAVFPKHWRMGRRMCIQFCECTRGHLLAQIGAHTPDEMDVTLLLKSLQ-----------RTLMFERDAAQRFEGMSEGEE--QEIDLDENGDAIDPQSAEGIKRKHRRKKREAER---------KALEEEMEKNGALTGDSSQ-SLPTIRGMISRSFDPFMTAYVALERKNMEHMINEVMSA-----ELVDRNGQLPVFSSSVNMFAYIRNSIKRCTALTNGQTFFDLQSEFKHCFQLYSQRLLEKLPGASAGTSGGLDSSNSSAISKVKLTDKQEEELCFVINTAEYCAETLPSLEEVIRAKIDKAFSESIELSQEIDTFHDVGAAAMKCIVAGLETSLDDDLTALHKVNWQAWEAVGDESSYVMQMGEKLRAFVPVLRQMLSGLYFTNFCDKFAASFVPKILQTVMKCRKVNQVATQQLLLDVYALKTLFLQLPALSSDAFASSSTSASAPVIPPRYTKFVTNEIGKVE 766          
BLAST of mRNA_S-dermatodea_contig9155.17223.1 vs. uniprot
Match: A0A7S1XQR9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQR9_9STRA)

HSP 1 Score: 408 bits (1049), Expect = 1.920e-129
Identity = 239/585 (40.85%), Postives = 343/585 (58.63%), Query Frame = 1
Query:    1 AQVPRIAELRETVTGIKNELVEQTSQAFNQVGQLASSTADPEGFQRDADKP-GQFRSLHEACLVVDALGGQARQQQIESFCDQQMQPYEPLFPQGSTQ----AQLDQIDRRFAWFRRLLRGVDLRFDGVFPKHWRLQHRLCMRFLAQTRAGLVEILEGGSKEAEDVTILLKASQHLHRHLYRAVHKCLAFENEAHSRFEGNDQDNRGATEVELDGEGNLIDPNSAEGIKRKYAKAARDDERDSSNPRGAPKSLFATLSADGEGVRDEVEGSLPTIVGVLSGVFEPFMGPYIAFERRNLDDRISAASRTAGSTDDDIDRD-HKLPVFSTSVNIFVCMKNSIKRCTKFTTGQTFFDLHHEYKSCLREYASLLQAKLPAAQAATGQQHRLVDGGESTVCYVVNTAEYCADILPQLEEMIKSNMDASFTDKVDLTEEQEPYYNVITQAILVLVSGLETRVEPAFRSMSAINWGSCEMVGEESHYVRSIHDAFQSFVPGIRSLLSTLYFRNFCDKMVTSFLPSFLSLILRQRRVNEMGTQQLLLDVYNLKTLMLKVPSLGLDPLQSTP-----VPVSYTKYVTKHMSKIE 1722
            A +P+IAE++E V  IK  L  Q  +AF+++GQLA+  AD +        P G F SL EACLVVDALG +AR+ Q++ FC +Q+ PY+ LF + +      A L+Q++RRFAWF+RLLRG+D RF  VFP+ W++ HRL ++F+A TR  L+ +LE           L +  Q     L RA+ KCLAFE E  +RFE   Q              +L   NSA+        A     R    PR        ++S  G     E E  L  + G L+ +F+PF+GPY+  E+RNLD   +   R +G   + +  D   L VF +SV++F+ +K S+KRCT  TTGQ FF+L  +YK CLREYA+LL +K+ A  + +G       G E+ +CYVV TAEYC D +PQLE+++++ +D ++ + +DL +EQ+ +++    A++ LVS LE +V PAFRS   +NW S   VGEES YV  +  A   FV  +R  L  L+FR+FCDK   +FL  +  LI+RQRRV+  G QQLLLD+Y++  LM  +P LGLDP + +      VP++Y + V  H+ +IE
Sbjct:  163 AAIPKIAEIKEMVDIIKARLTTQIHEAFDEIGQLAAGVADVDMDVSGGGSPSGAFSSLKEACLVVDALGAEARKTQVDKFCREQLAPYKKLFGRDTAPDPDAATLEQVERRFAWFKRLLRGIDDRFGAVFPEGWKVTHRLTLQFMAATREQLLALLEDRETSMSSTPDLDEEQQV--EVLLRALQKCLAFEREMAARFEEPAQ--------------SLSPKNSAD--------AGGATMRRGRKPRRGADGHRVSMSTLGPEPEQEDEEVLLLMKGQLTELFDPFLGPYLQLEKRNLD---AVVQRISGEGVESVRGDVATLSVFESSVDVFMYIKGSVKRCTALTTGQAFFNLQKQYKQCLREYAALLDSKVQAIASRSGA------GAETVICYVVTTAEYCGDTVPQLEDLVRARIDGAYKESIDLADEQDAFHDASASAVMALVSALEDQVNPAFRSFGGVNWSSFSDVGEESRYVLMVQQAALEFVAPVRRALPPLFFRSFCDKFCGAFLQRYHGLIMRQRRVSNEGLQQLLLDLYSIDKLMQALPILGLDPKEGSDGPPPTVPLAYKRLVNAHVKRIE 714          
BLAST of mRNA_S-dermatodea_contig9155.17223.1 vs. uniprot
Match: A0A8K1C5L5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5L5_PYTOL)

HSP 1 Score: 406 bits (1043), Expect = 1.450e-128
Identity = 235/588 (39.97%), Postives = 349/588 (59.35%), Query Frame = 1
Query:    1 AQVPRIAELRETVTGIKNELVEQTSQAFNQVGQLASSTADPEGFQRDADKPGQFRSLHEACLVVDALGGQARQQQIESFCDQQMQPYEPLFPQGSTQAQLDQIDRRFAWFRRLLRGVDLRFDGVFPKHWRLQHRLCMRFLAQTRAGLVEILEGGSKEAEDVTILLKASQHLHRHLYRAVHKCLAFENEAHSRFEGNDQDNRGATEVELDGEGNLIDPNSAEGIKRKYAKAARDDERDSSNPRGAPKSLFATLSADGE--GVRDEVEGSLPTIVGVLSGVFEPFMGPYIAFERRNLDDRISAASRTAGSTDDDIDRDHKLPVFSTSVNIFVCMKNSIKRCTKFTTGQTFFDLHHEYKSCLREYASLLQAKLPAAQA-ATGQQH-----RLVDGGESTVCYVVNTAEYCADILPQLEEMIKSNMDASFTDKVDLTEEQEPYYNVITQAILVLVSGLETRVEPAFRSMSAINWGSCEMVGEESHYVRSIHDAFQSFVPGIRSLLSTLYFRNFCDKMVTSFLPSFLSLILRQRRVNEMGTQQLLLDVYNLKTLMLKVPSLGLDPLQS------TPVPVSYTKYVTKHMSKIE 1722
            A V +I EL +T   ++ EL  Q    F  +G L +     E F  + ++   F +L  AC V+DALG  AR + I+SFC +Q+  YE LF +G   A L   D+R+ WF  LL  +D R D VFPKHWR+  R+C+ F   TR   +  +   + +  DVT+LLKA Q           + L FE +   RFEG+   N    E E D  G LIDP+SAEGIKR++ +  R+ ER         K+L A +   GE  G +D+   +LPT+ G++S  F+PFM  Y++ ER+N++  I         + + +DR+ +LPVFS+SVN+F  ++NS+KRC     GQTFF+LH E+K C + Y+  L AK+P+ Q  A G        +L D  E  +C+++NTAEYCA+ LP LEE+I++ +D +F+D ++L++E + +++V   A+  +V+GL+T +E    ++   NW + E VG+ES YV  I +  ++FVP +R +LS+LYF NFCDK   S +P  L  +L+ RRVN++ TQQLLLDVY LKTL L++P +G +   S      T +P  YTK+VT+ M+K+E
Sbjct:  203 ANVSKIVELHKTARALQEELSAQIYADFAAIGPLDNLE---ENFPMEEERQAVFANLSAACAVIDALGKPARDKLIQSFCHEQLSEYEKLFGEGGECAGLQNADKRYPWFYHLLSVIDERMDQVFPKHWRMSRRMCINFCEATRTHYLSQVGSMAPDEMDVTLLLKALQ-----------RTLMFERDVADRFEGSSS-NGVENEDEFDDNGQLIDPHSAEGIKRRHRRKKREAER---------KALEAEMEKRGELFGGQDD---TLPTLRGIISKSFDPFMTSYVSLERKNMEQMIHEVM-----SQEIVDRNGQLPVFSSSVNMFAYIRNSVKRCLALANGQTFFNLHLEFKRCFQLYSHRLLAKMPSQQMIAAGDSQGAFKVKLGDKQEEELCFIINTAEYCAETLPSLEEVIRAKIDKAFSDSIELSQEIDTFHDVGAAAMKCIVAGLDTMLEEELNTIPRTNWQTWEAVGDESMYVTQIGEKLRAFVPVLRQMLSSLYFTNFCDKFAASCVPKLLQAVLKCRRVNDVATQQLLLDVYALKTLFLQLPIIGNETHSSSSSSSTTMIPARYTKFVTQEMAKVE 758          
BLAST of mRNA_S-dermatodea_contig9155.17223.1 vs. uniprot
Match: K3X619_GLOUD (Vps53_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X619_GLOUD)

HSP 1 Score: 405 bits (1042), Expect = 2.690e-128
Identity = 243/590 (41.19%), Postives = 346/590 (58.64%), Query Frame = 1
Query:    1 AQVPRIAELRETVTGIKNELVEQTSQAFNQVGQLASSTADPEGFQRDADKPGQFRSLHEACLVVDALGGQARQQQIESFCDQQMQPYEPLFPQGSTQAQLDQIDRRFAWFRRLLRGVDLRFDGVFPKHWRLQHRLCMRFLAQTRAGLVEILEGGSKEAEDVTILLKASQHLHRHLYRAVHKCLAFENEAHSRFEGNDQDNRGAT-EVELDGEGNLIDPNSAEGIKRKYAKAARDDERDSSNPRGAPKSLFATLSADGEGVRDEVEGSLPTIVGVLSGVFEPFMGPYIAFERRNLDDRISAASRTAGSTDDDIDRDHKLPVFSTSVNIFVCMKNSIKRCTKFTTGQTFFDLHHEYKSCLREYASLLQAKLPAA--------QAATGQQHRLVDGGESTVCYVVNTAEYCADILPQLEEMIKSNMDASFTDKVDLTEEQEPYYNVITQAILVLVSGLETRVEPAFRSMSAINWGSCEMVGEESHYVRSIHDAFQSFVPGIRSLLSTLYFRNFCDKMVTSFLPSFLSLILRQRRVNEMGTQQLLLDVYNLKTLMLKVPSLGLD-------PLQSTPVPVSYTKYVTKHMSKIE 1722
            + V +I EL  TV  I+ E+  Q    F  +G L S     E F  + +    F +L  AC VVDALG   R + I SFC++Q+  YE LF  G   A L Q ++R+ WF  LL  +D R D VFPKHWR+  R+C++F   TR  L+  +   S +  DVT LLK+ Q           + L FE +   RFEG+     G   E E D +G LIDPNSAEGIKRK+ +  R+ ER         K+L A +  +GE    + +  LPTI G++S  F+PFM  Y+A ER+N++  I     +     + +DR+ +LPVFS+SV++F  ++NSIKRC   T GQTFFDLH+E+K CL  YA  L AKLPAA           +  + +L +  E  +C+V+NTAEYCA+ LP LEE+I+  +D +F++ ++L++E +  ++V   A+  +V+GLET ++    +MS  NW + E VG+ES YV  I +  +SFVP IR +LS LYF NF DK   SF+P  L  +++ R+VN++ TQQLLLDVY LKTL L++P+LG +             VP  YTK+VT+ ++K+E
Sbjct:  206 SNVSKIVELHSTVRTIQEEIGAQIFADFRAIGPLESLE---ENFSTEEELQAVFNNLSAACAVVDALGKATRGKLIRSFCEEQLVSYEKLFGAGGECAGLQQAEKRYPWFYHLLSVIDERMDLVFPKHWRMGRRMCIQFCEITRTHLLSQIGAQSPDEMDVTTLLKSLQ-----------RTLMFERDVAQRFEGSASMPGGVEQEDEFDEDGQLIDPNSAEGIKRKHRRRKREAER---------KALEAEMEKNGELFGGDED--LPTIRGIISRSFDPFMTSYVALERKNMEQMIHEVMSS-----EIVDRNGQLPVFSSSVHMFAYIRNSIKRCLALTNGQTFFDLHNEFKRCLHLYAQRLLAKLPAAPPGGATNTDGLSSFKVKLGEKQEEELCFVINTAEYCAETLPSLEEVIRGKIDKAFSESIELSQEIDTLHDVGAAAMKCIVAGLETLLDDDLSAMSKANWQAWEAVGDESEYVMQIGEKMRSFVPVIRQMLSGLYFTNFYDKFAASFVPKILQAVMKCRKVNQVATQQLLLDVYALKTLFLQLPTLGHEHSSXXXXXXXGVVVPARYTKFVTQEIAKVE 765          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9155.17223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR59_ECTSI0.000e+085.42Vps53_N domain-containing protein n=2 Tax=Ectocarp... [more]
A0A836CNS0_9STRA5.480e-19654.78Vps53-like protein n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S2W1C4_9STRA6.710e-15846.22Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2G306_9STRA7.480e-14144.60Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
A0A4D9D4L4_9STRA4.020e-13441.92Vps53_N domain-containing protein n=3 Tax=Monodops... [more]
H3GT71_PHYRM1.300e-13140.20Vps53_N domain-containing protein n=27 Tax=Peronos... [more]
A0A3F2REQ9_9STRA4.530e-13139.70Vps53_N domain-containing protein n=1 Tax=Phytopht... [more]
A0A7S1XQR9_9STRA1.920e-12940.85Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8K1C5L5_PYTOL1.450e-12839.97Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3X619_GLOUD2.690e-12841.19Vps53_N domain-containing protein n=1 Tax=Globispo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9155contigS-dermatodea_contig9155:3599..8763 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score971.1
Seed ortholog evalue2.3e-280
Seed eggNOG ortholog2880.D7FR59
Preferred nameVPS53
KEGG koko:K20299
GOsGO:0000003,GO:0000139,GO:0000938,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005768,GO:0005794,GO:0005802,GO:0005829,GO:0006810,GO:0006886,GO:0006890,GO:0006892,GO:0006896,GO:0006950,GO:0006970,GO:0007009,GO:0007034,GO:0007041,GO:0008104,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010256,GO:0010286,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0016197,GO:0016482,GO:0019725,GO:0022414,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032386,GO:0032387,GO:0032388,GO:0032456,GO:0032501,GO:0032504,GO:0032588,GO:0032879,GO:0032991,GO:0033036,GO:0034613,GO:0036477,GO:0040012,GO:0040017,GO:0042147,GO:0042592,GO:0042886,GO:0043025,GO:0043204,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044297,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0045184,GO:0046907,GO:0048193,GO:0048471,GO:0048518,GO:0048519,GO:0048520,GO:0048609,GO:0048878,GO:0050789,GO:0050795,GO:0050896,GO:0051049,GO:0051050,GO:0051051,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0055037,GO:0055082,GO:0055088,GO:0060341,GO:0060378,GO:0061024,GO:0065007,GO:0065008,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0090156,GO:0090325,GO:0090326,GO:0097458,GO:0097708,GO:0098588,GO:0098791,GO:0099023,GO:1903649,GO:1903650,GO:1903651,GO:1904809,GO:1904810,GO:1904811,GO:1990745
EggNOG free text desc.retrograde transport, endosome to Golgi
EggNOG OGsKOG2180@1,KOG2180@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionVps53-like, N-terminal
Ec32 orthologEc-09_003400.1
Exons7
Model size1725
Cds size1725
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925389.9769924-CDS-S-dermatodea_contig9155:3598..38231622925389.9769924-CDS-S-dermatodea_contig9155:3598..3823Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9155 3599..3823 +
1694079900.9777763-CDS-S-dermatodea_contig9155:3598..38231694079900.9777763-CDS-S-dermatodea_contig9155:3598..3823Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9155 3599..3823 +
1622925389.992176-CDS-S-dermatodea_contig9155:3958..42641622925389.992176-CDS-S-dermatodea_contig9155:3958..4264Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9155 3959..4264 +
1694079900.9931788-CDS-S-dermatodea_contig9155:3958..42641694079900.9931788-CDS-S-dermatodea_contig9155:3958..4264Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9155 3959..4264 +
1622925390.0037014-CDS-S-dermatodea_contig9155:4366..49081622925390.0037014-CDS-S-dermatodea_contig9155:4366..4908Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9155 4367..4908 +
1694079901.0045514-CDS-S-dermatodea_contig9155:4366..49081694079901.0045514-CDS-S-dermatodea_contig9155:4366..4908Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9155 4367..4908 +
1622925390.012463-CDS-S-dermatodea_contig9155:5227..53861622925390.012463-CDS-S-dermatodea_contig9155:5227..5386Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9155 5228..5386 +
1694079901.0185254-CDS-S-dermatodea_contig9155:5227..53861694079901.0185254-CDS-S-dermatodea_contig9155:5227..5386Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9155 5228..5386 +
1622925390.0236754-CDS-S-dermatodea_contig9155:6424..66881622925390.0236754-CDS-S-dermatodea_contig9155:6424..6688Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9155 6425..6688 +
1694079901.0375297-CDS-S-dermatodea_contig9155:6424..66881694079901.0375297-CDS-S-dermatodea_contig9155:6424..6688Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9155 6425..6688 +
1622925390.0330212-CDS-S-dermatodea_contig9155:7254..74031622925390.0330212-CDS-S-dermatodea_contig9155:7254..7403Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9155 7255..7403 +
1694079901.0559294-CDS-S-dermatodea_contig9155:7254..74031694079901.0559294-CDS-S-dermatodea_contig9155:7254..7403Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9155 7255..7403 +
1622925390.04612-CDS-S-dermatodea_contig9155:8683..87631622925390.04612-CDS-S-dermatodea_contig9155:8683..8763Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9155 8684..8763 +
1694079901.0699236-CDS-S-dermatodea_contig9155:8683..87631694079901.0699236-CDS-S-dermatodea_contig9155:8683..8763Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9155 8684..8763 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9155.17223.1prot_S-dermatodea_contig9155.17223.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9155 3599..8763 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9155.17223.1

>prot_S-dermatodea_contig9155.17223.1 ID=prot_S-dermatodea_contig9155.17223.1|Name=mRNA_S-dermatodea_contig9155.17223.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=575bp
AQVPRIAELRETVTGIKNELVEQTSQAFNQVGQLASSTADPEGFQRDADK
PGQFRSLHEACLVVDALGGQARQQQIESFCDQQMQPYEPLFPQGSTQAQL
DQIDRRFAWFRRLLRGVDLRFDGVFPKHWRLQHRLCMRFLAQTRAGLVEI
LEGGSKEAEDVTILLKASQHLHRHLYRAVHKCLAFENEAHSRFEGNDQDN
RGATEVELDGEGNLIDPNSAEGIKRKYAKAARDDERDSSNPRGAPKSLFA
TLSADGEGVRDEVEGSLPTIVGVLSGVFEPFMGPYIAFERRNLDDRISAA
SRTAGSTDDDIDRDHKLPVFSTSVNIFVCMKNSIKRCTKFTTGQTFFDLH
HEYKSCLREYASLLQAKLPAAQAATGQQHRLVDGGESTVCYVVNTAEYCA
DILPQLEEMIKSNMDASFTDKVDLTEEQEPYYNVITQAILVLVSGLETRV
EPAFRSMSAINWGSCEMVGEESHYVRSIHDAFQSFVPGIRSLLSTLYFRN
FCDKMVTSFLPSFLSLILRQRRVNEMGTQQLLLDVYNLKTLMLKVPSLGL
DPLQSTPVPVSYTKYVTKHMSKIEM
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mRNA from alignment at S-dermatodea_contig9155:3599..8763+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9155.17223.1 ID=mRNA_S-dermatodea_contig9155.17223.1|Name=mRNA_S-dermatodea_contig9155.17223.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5165bp|location=Sequence derived from alignment at S-dermatodea_contig9155:3599..8763+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCGCAGGTCCCTCGAATCGCAGAGCTCCGAGAGACGGTCACAGGCATCAA GAACGAACTGGTCGAGCAAACATCCCAAGCTTTTAATCAGGTCGGGCAGC TCGCAAGCTCCACAGCCGATCCAGAGGGCTTCCAGAGGGATGCGGACAAG CCTGGGCAGTTCCGTTCTCTCCACGAGGCTTGTCTGGTTGTGGATGCTCT CGGAGGGCAGGCTCGACAACAGCAGGTGGCTTCCTAAGCTGAGCATGTGC GGTAGTACTCAGGAGCGAAACCATTGGGCCAATACCCTTCATCTCATGGC CTGTGCTCAAGTATACCTTTCAATCTTGCACGCTGGTCGACCGCTACCCA TGCCCTGCAGATCGAATCATTCTGCGACCAACAGATGCAGCCGTACGAGC CGCTCTTTCCCCAAGGATCTACCCAGGCTCAGCTAGATCAAATAGATCGA CGTTTTGCTTGGTTCCGACGCCTCCTGCGCGGGGTGGACTTGCGCTTCGA CGGCGTGTTCCCCAAGCACTGGCGTTTGCAGCACCGCCTGTGCATGAGGT TCCTCGCTCAGACGCGTGCTGGCTTGGTGGAAATTTTGGAGGGAGGTTCG AAGGAGGCAGAGGATGTGACCATACTCCTGAAGGCAAGTCAACACCTCCA TCGACACCTCTATCGGGTGCAGCACTCTGAAATTAGGTCAATGACTGCCG ACGTAGATTCCTAGTGTCCCGATCCTTTCAGTGGTTTTGTTCTACTCACT TTTTCTGTGCTATCGCAGGCGGTCCACAAATGCCTAGCCTTCGAGAACGA GGCGCACTCTCGATTTGAGGGTAACGATCAAGACAATCGGGGGGCAACCG AAGTCGAACTCGATGGAGAAGGAAATCTGATCGATCCCAACAGTGCGGAA GGCATTAAGCGCAAGTACGCAAAGGCAGCTCGGGACGACGAGCGAGATTC CTCTAACCCACGTGGGGCTCCGAAGTCGCTGTTCGCGACTCTGAGCGCGG ACGGCGAAGGAGTAAGGGACGAGGTGGAGGGCTCTCTACCGACGATCGTT GGGGTACTGTCCGGCGTGTTTGAGCCCTTCATGGGGCCGTACATCGCCTT CGAGAGGCGAAATTTGGACGATCGCATCAGTGCTGCGTCAAGGACCGCGG GCTCCACAGATGATGACATCGACCGAGATCACAAGTTGCCGGTGTTCAGC ACGAGTGTCAACATCTTCGTTTGCATGAAAAACTCCATAAAGCGGTGCAC CAAATTCACCACAGGCCAGACGTTTTTCGACTTGCACCATGAGTATAAGT CGTGTCTCAGGTAAGAGCTTTATTGCAACGTTCACCACATTTTTATGTAA CTCGTATGATGAGTATGTTGCATTTTTACACGCTTGCAGGAAATTTCATG AGATTTACTGTAATTTGCAGTAATTCCTCCTCAGCTGCTGTGCCACGCAC TCAAAGTACCTCTCTTATAGCATGTCCTCAACAGACATGGCACGATAACG AGAAAATTATCACGCTCGTATGTCCGCTTTGACTTTTAATAGCTCGTTGA TAGCTGGTCTGTAGTGCGCTGTGCTTGAGGTACCGATCCCCTATATGTCA GCGAATAAGTTATATCGGCGTATTTGCAGGGAGTACGCGAGTCTACTTCA GGCGAAGCTACCAGCGGCACAAGCTGCGACCGGTCAACAGCATCGGCTGG TGGATGGCGGAGAGAGCACGGTTTGTTACGTGGTCAACACGGCAGAGTAC TGCGCCGACATTCTTCCTCAATTGGAAGAAATGATCAAGTGAGCCGTGGT TTTTGACAACGTCGTGTTTGCATCTGATGTACCGATTGTTGATAGCAAAT ATGCGAATACTGGACTTGAGCCAGCTGACCTGATACGCGCATGTTAACGT CTTTCATCAACGCCGACGGCTCGCACTTTCATGTATTTGGTATTATTTTT TCTCATGCACGACCGAACGGCCGTACAAGTGCCCAGATTCCGTCGGCGGT CGCAAGGGAACACCCCATACCACCCCGGTGCGCGCCTTCGATTATTATGG CACATTCAGCACTCGCACAGCTCACGTATTCCCCCAATTTTGAAAGGAGA CCTTTCGGTTGTCTTGCGAAAAACGTTCGGTATGTGCCCACTGAAGGTTG GGTTGTTCGTGTCCAGAAGGCAAGGCTAGTTAGTGCATGATAATCCTTTG TCGTCACCCATGTTGAATTTTGAAATCTGGGCGCGCACAACATGGTAGTC CACCGTTCCCCACGGAACATTGTGGCGCGTGCTCAAGCTATAAGAGCTCA GGTGAGTGGGCCCGATGTTTAATGTTTGACGATATTTTCACTACCGGCAT ACCTCTACCTCTCCTGGTACTGTCCGCGCACCTCACCGACAGCAGAAGAT CCCTTCGGCTTTCCTGTGTTTTATACTTGTAGACCCGAATTATTTGTGGT CGACGCACATCAAGCAGGCCGATGCAGTTGCTTGTTTATATATTTTACTG TTCCATCAGGGAGGCGTGTGTTGTGTGTGTGGCTCATGTACCACTGACCG GCCTTATCCGAGTCTATCCCGTCTGTGGTCGCCCTCTCCCCGGTCCGTTT CTTACATTTTATACCGTTTTGGTTTCCGCGCTCCCGCAGCTCGCCGAGTA CTCGGATTGGACTATAGAGGGGATGCTATATACGATTGTTAATTTTTTGC TCGTGATGTGATGCCGCCTTGTTTAGTTGTGCTTCGCCTCTTTTCGTCAG TCACAACCCGCGAGGTTTCGGTACCACTCTACGCGTTTCTTTCGAAACGT TTTCCTGGCCTCCCACTTGCGAGCAGGAGCAATATGGACGCCTCTTTCAC GGACAAGGTCGACCTGACGGAGGAGCAAGAGCCGTACTACAACGTAATTA CCCAGGCCATTCTGGTTCTGGTCTCTGGATTAGAAACCCGCGTGGAACCG GCATTTCGGTCGATGTCAGCCATCAACTGGGGGAGCTGCGAGATGGTCGG AGAAGAAAGCCACTACGTGCGTAGCATTCACGATGCATTTCAGAGCTTCG TACCCGGCATCCGCAGCCTTCTGTCAACGCTCTATTTCAGGTGAAGACAA CATGCATAAAGTACTCAAGAGCTGTTTGTGCGATGGGTTTAAAGAAGGGA CAACGAAGGCGAAACCGGCTAGCTGTGCCAAGTGGAGTATTTTTCGACGT CCTTCCTATCGTCTACTTTGCTGCTACAGAAGGCATGATGTTTAGTCTGC TACGTTTCTCCTTCGCCTGCGGTCCCCCTGCGTAAGGGCATGTCGTGGGT AGTACCATTTATCGGAGCATGCTTCAACGCCCAAACCCATATGGGCGATT TTGTACCGTTGATTTCGACTTTTTTTTTCTGCCTAACTTCTGTACCCTAT CGGCGTGTTCTAGATCCCGTCTATGGTCACTGGGGATAGTCTCGTCTTTG CTCGGGACGCGCCTTCGTTTTTTTTCGCAGCTCGCCAACGATTTGTCGGT TTTTGCTTGCTCAGGCCCTGGCGTCTTCCACGGCAGAGCAGATGTACTTA CTATTTTTGTTTTTCAGCCCGGTTGGATAAGACGGTGTGCTTGATTGAAG AAGCATTTGCATCACGAGCAACTAAAAGTTTTAATCTTCGTGGTCGGTAC CCCCAGGAACTTTTGCGACAAGATGGTTACGTCCTTCTTGCCGTCGTTCC TGAGCCTCATTCTTCGGCAGCGCCGAGTTAACGAGATGGGTACCCAGCAG CTCCTTTTGGATGTCTACAATCTCAAGACCTTGATGCTGAAGGTCCCTTC CTTAGGTGGGTCGCTGGGTATCCTGGTTGTCCCGAATAGTTTCGAGCGAT CAGCAGGAAGTTGTAGTGTCAGCCTCTCCGGTCACAAGACCCTTTTCGCA AACGTGCTATAACTGGGCACCGTAGACTAGCTTTGCTTTCAAGGCGACGG TGAACCAATTGCTTGGACACGAAGCAGTATATTTCGTCGGTGGAAGCGCG CGGACGAAAGTTTATCGTTCGTCATTGCGCATACAACTTCACGCCATTGA TAAAACAACTCAATATCGTTTTTTTTAGTTCCAGTGGCTACACCTTGTGA TGAAGACTCCTAACTTTTGTTTGCTTGGGAGAACCAACGTGCTGTAGTTG TCTAAAGGGGTTGATAGACTCCTAAATTTTGTTTGCTTGGGAGAACCAAC GTGCTTTAGTTGTCTAAAGGGGTTGATAATTATTTTGGGCACAACCTCGG AAATGTTCGACGTTGGCTTGGGTCATGATATCTGAGTCTTGATACGATCT TCACAAACGCACGGACAACGTTTTGTCCGAAGCTCTCGAGGACGATCTAA GCGATGAGATGGACACGTGCTGACTGGTACATTGGGGCGCACAGAGGGAA GTCGTCTATTTCACTCCCCTGTGCGTATTTACCACCTCCGGCGAGATTGT ACGAATACAGCAGTATCAGCCCCTCCACAATTTGCTACGGGTTCCCCACG TTGTCGCTGTCGTACTCGAGGCTGAGGCTGACGAGCTCTGATGGCGTGTC TACAGTATAAAAGTACAATGTATACATACTGTAATTAGTTGGCCCATCAT GTCTCCTATTTTTTTTTTGCCAGTGTGGTCAAATGGCGAGGGAGATCCCA TGGACTGCAACGTCACACAGGTTGTTTTGGCTTTTCAGTTTCCGGCATTG CAAAGCACAGGATTCGTAAAGGAGGAATACTGCACTGTAGGAAAAATCAT GATTCGCGAAGTGCTTGCTCGAACCTGTGTTTCGTTTGTTTTTTATTCTT GTCGGGCGATTTTACTCACGATAACATGTGTCCACTAGGCACTGTCCGTT GCACGTTGGATGCGTCGATCGGATGGATGTGCGTCGTACCGTATCTGTCC AGCTGCTTGTCGGGTTGACTAAGGTATGGCAACCTCTGAGATCAGATGTC CTTAAATACGGATACCTCATGTATCGTGGGTATATTTGAGGGCCCTGGTA TGGTACTGTACACCGCCAATGTGTCGTGCTACCATTGCTTATTTGTGTCG CACGTGCATACGTTAAACTCTTGCATCACTGCCAGGTTTGGATCCGTTGC AGAGCACTCCCGTTCCGGTCAGCTACACCAAGTACGTCACCAAGCACATG TCCAAGATCGAGATG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9155:3599..8763+

>mRNA_S-dermatodea_contig9155.17223.1 ID=mRNA_S-dermatodea_contig9155.17223.1|Name=mRNA_S-dermatodea_contig9155.17223.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3450bp|location=Sequence derived from alignment at S-dermatodea_contig9155:3599..8763+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCGCAGGTCCCTCGAATCGCAGAGCTCCGAGAGACGGTCACAGGCATCAA
GAACGAACTGGTCGAGCAAACATCCCAAGCTTTTAATCAGGTCGGGCAGC
TCGCAAGCTCCACAGCCGATCCAGAGGGCTTCCAGAGGGATGCGGACAAG
CCTGGGCAGTTCCGTTCTCTCCACGAGGCTTGTCTGGTTGTGGATGCTCT
CGGAGGGCAGGCTCGACAACAGCAGGCGCAGGTCCCTCGAATCGCAGAGC
TCCGAGAGACGGTCACAGGCATCAAGAACGAACTGGTCGAGCAAACATCC
CAAGCTTTTAATCAGGTCGGGCAGCTCGCAAGCTCCACAGCCGATCCAGA
GGGCTTCCAGAGGGATGCGGACAAGCCTGGGCAGTTCCGTTCTCTCCACG
AGGCTTGTCTGGTTGTGGATGCTCTCGGAGGGCAGGCTCGACAACAGCAG
ATCGAATCATTCTGCGACCAACAGATGCAGCCGTACGAGCCGCTCTTTCC
CCAAGGATCTACCCAGGCTCAGCTAGATCAAATAGATCGACGTTTTGCTT
GGTTCCGACGCCTCCTGCGCGGGGTGGACTTGCGCTTCGACGGCGTGTTC
CCCAAGCACTGGCGTTTGCAGCACCGCCTGTGCATGAGGTTCCTCGCTCA
GACGCGTGCTGGCTTGGTGGAAATTTTGGAGGGAGGTTCGAAGGAGGCAG
AGGATGTGACCATACTCCTGAAGGCAAGTCAACACCTCCATCGACACCTC
TATCGGATCGAATCATTCTGCGACCAACAGATGCAGCCGTACGAGCCGCT
CTTTCCCCAAGGATCTACCCAGGCTCAGCTAGATCAAATAGATCGACGTT
TTGCTTGGTTCCGACGCCTCCTGCGCGGGGTGGACTTGCGCTTCGACGGC
GTGTTCCCCAAGCACTGGCGTTTGCAGCACCGCCTGTGCATGAGGTTCCT
CGCTCAGACGCGTGCTGGCTTGGTGGAAATTTTGGAGGGAGGTTCGAAGG
AGGCAGAGGATGTGACCATACTCCTGAAGGCAAGTCAACACCTCCATCGA
CACCTCTATCGGGCGGTCCACAAATGCCTAGCCTTCGAGAACGAGGCGCA
CTCTCGATTTGAGGGTAACGATCAAGACAATCGGGGGGCAACCGAAGTCG
AACTCGATGGAGAAGGAAATCTGATCGATCCCAACAGTGCGGAAGGCATT
AAGCGCAAGTACGCAAAGGCAGCTCGGGACGACGAGCGAGATTCCTCTAA
CCCACGTGGGGCTCCGAAGTCGCTGTTCGCGACTCTGAGCGCGGACGGCG
AAGGAGTAAGGGACGAGGTGGAGGGCTCTCTACCGACGATCGTTGGGGTA
CTGTCCGGCGTGTTTGAGCCCTTCATGGGGCCGTACATCGCCTTCGAGAG
GCGAAATTTGGACGATCGCATCAGTGCTGCGTCAAGGACCGCGGGCTCCA
CAGATGATGACATCGACCGAGATCACAAGTTGCCGGTGTTCAGCACGAGT
GTCAACATCTTCGTTTGCATGAAAAACTCCATAAAGCGGTGCACCAAATT
CACCACAGGCCAGACGTTTTTCGACTTGCACCATGAGTATAAGTCGTGTC
TCAGGCGGTCCACAAATGCCTAGCCTTCGAGAACGAGGCGCACTCTCGAT
TTGAGGGTAACGATCAAGACAATCGGGGGGCAACCGAAGTCGAACTCGAT
GGAGAAGGAAATCTGATCGATCCCAACAGTGCGGAAGGCATTAAGCGCAA
GTACGCAAAGGCAGCTCGGGACGACGAGCGAGATTCCTCTAACCCACGTG
GGGCTCCGAAGTCGCTGTTCGCGACTCTGAGCGCGGACGGCGAAGGAGTA
AGGGACGAGGTGGAGGGCTCTCTACCGACGATCGTTGGGGTACTGTCCGG
CGTGTTTGAGCCCTTCATGGGGCCGTACATCGCCTTCGAGAGGCGAAATT
TGGACGATCGCATCAGTGCTGCGTCAAGGACCGCGGGCTCCACAGATGAT
GACATCGACCGAGATCACAAGTTGCCGGTGTTCAGCACGAGTGTCAACAT
CTTCGTTTGCATGAAAAACTCCATAAAGCGGTGCACCAAATTCACCACAG
GCCAGACGTTTTTCGACTTGCACCATGAGTATAAGTCGTGTCTCAGGGAG
TACGCGAGTCTACTTCAGGCGAAGCTACCAGCGGCACAAGCTGCGACCGG
TCAACAGCATCGGCTGGTGGATGGCGGAGAGAGCACGGTTTGTTACGTGG
TCAACACGGCAGAGTACTGCGCCGACATTCTTCCTCAATTGGAAGAAATG
ATCAAGGAGTACGCGAGTCTACTTCAGGCGAAGCTACCAGCGGCACAAGC
TGCGACCGGTCAACAGCATCGGCTGGTGGATGGCGGAGAGAGCACGGTTT
GTTACGTGGTCAACACGGCAGAGTACTGCGCCGACATTCTTCCTCAATTG
GAAGAAATGATCAAGAGCAATATGGACGCCTCTTTCACGGACAAGGTCGA
CCTGACGGAGGAGCAAGAGCCGTACTACAACGTAATTACCCAGGCCATTC
TGGTTCTGGTCTCTGGATTAGAAACCCGCGTGGAACCGGCATTTCGGTCG
ATGTCAGCCATCAACTGGGGGAGCTGCGAGATGGTCGGAGAAGAAAGCCA
CTACGTGCGTAGCATTCACGATGCATTTCAGAGCTTCGTACCCGGCATCC
GCAGCCTTCTGTCAACGCTCTATTTCAGGAGCAATATGGACGCCTCTTTC
ACGGACAAGGTCGACCTGACGGAGGAGCAAGAGCCGTACTACAACGTAAT
TACCCAGGCCATTCTGGTTCTGGTCTCTGGATTAGAAACCCGCGTGGAAC
CGGCATTTCGGTCGATGTCAGCCATCAACTGGGGGAGCTGCGAGATGGTC
GGAGAAGAAAGCCACTACGTGCGTAGCATTCACGATGCATTTCAGAGCTT
CGTACCCGGCATCCGCAGCCTTCTGTCAACGCTCTATTTCAGGAACTTTT
GCGACAAGATGGTTACGTCCTTCTTGCCGTCGTTCCTGAGCCTCATTCTT
CGGCAGCGCCGAGTTAACGAGATGGGTACCCAGCAGCTCCTTTTGGATGT
CTACAATCTCAAGACCTTGATGCTGAAGGTCCCTTCCTTAGGAACTTTTG
CGACAAGATGGTTACGTCCTTCTTGCCGTCGTTCCTGAGCCTCATTCTTC
GGCAGCGCCGAGTTAACGAGATGGGTACCCAGCAGCTCCTTTTGGATGTC
TACAATCTCAAGACCTTGATGCTGAAGGTCCCTTCCTTAGGTTTGGATCC
GTTGCAGAGCACTCCCGTTCCGGTCAGCTACACCAAGTACGTCACCAAGC
ACATGTCCAAGATCGAGATGGTTTGGATCCGTTGCAGAGCACTCCCGTTC
CGGTCAGCTACACCAAGTACGTCACCAAGCACATGTCCAAGATCGAGATG
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