mRNA_S-dermatodea_contig9139.17212.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9139.17212.1 vs. uniprot
Match: D7FHW4_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHW4_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 5.830e-17 Identity = 43/55 (78.18%), Postives = 50/55 (90.91%), Query Frame = 1
Query: 736 LEARRNCTATVQSYAPLVEALSRELRWQEAIMLFQEMENRKITPTVQSYTAVVRA 900
L+ARRNC+ T+ SY PLV+AL+RELRWQEAIMLFQEME+RKI PTVQ YT+VVRA
Sbjct: 531 LQARRNCSVTIHSYTPLVDALTRELRWQEAIMLFQEMEDRKIMPTVQCYTSVVRA 585 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9139.17212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9139.17212.1 >prot_S-dermatodea_contig9139.17212.1 ID=prot_S-dermatodea_contig9139.17212.1|Name=mRNA_S-dermatodea_contig9139.17212.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=301bp MDANGVEKDVVTISAAISACADKGQWAQAEKLLQDMLEAGLTPNVITYTSback to top mRNA from alignment at S-dermatodea_contig9139:653..8511- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9139.17212.1 ID=mRNA_S-dermatodea_contig9139.17212.1|Name=mRNA_S-dermatodea_contig9139.17212.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7859bp|location=Sequence derived from alignment at S-dermatodea_contig9139:653..8511- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9139:653..8511- >mRNA_S-dermatodea_contig9139.17212.1 ID=mRNA_S-dermatodea_contig9139.17212.1|Name=mRNA_S-dermatodea_contig9139.17212.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1806bp|location=Sequence derived from alignment at S-dermatodea_contig9139:653..8511- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |