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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 695 |
| Cds size | 474 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622925388.070879-UTR-S-dermatodea_contig912:21102..21323 | 1622925388.070879-UTR-S-dermatodea_contig912:21102..21323 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig912 21103..21323 - |
| 1694079899.7721796-UTR-S-dermatodea_contig912:21102..21323 | 1694079899.7721796-UTR-S-dermatodea_contig912:21102..21323 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig912 21103..21323 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig912.17196.1 >prot_S-dermatodea_contig912.17196.1 ID=prot_S-dermatodea_contig912.17196.1|Name=mRNA_S-dermatodea_contig912.17196.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=158bp
MLAMPQTSAPYSGMLTRKQQWRRVESRRPYLPGSSSPPLQTASRQKTLQV
RATADARIPEQQQQQQQQRDCSVDDGDRHTHHSDPRASHMSLSRTRRHAG
IRYVKPTSPADRKRQGSKCDLLANSAGGLESQCDRQRSASMPLPLTEVDG
EAEPEDRQ back to topmRNA from alignment at S-dermatodea_contig912:18413..21323- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig912.17196.1 ID=mRNA_S-dermatodea_contig912.17196.1|Name=mRNA_S-dermatodea_contig912.17196.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2911bp|location=Sequence derived from alignment at S-dermatodea_contig912:18413..21323- (Saccorhiza dermatodea SderLu1190fm monoicous)
CCACATGACTTCACTTCAGTTGTGTCTCACAATTGTAAACCCAAGCATAG
AATCTGCTATCTACCTCCCATTATCAGCACTCCAAATCTGGCCTTGGCAT
CCTCATCTCCATCCACACCTCTACTTGGATACATACACCGCACCTGCTCC
AAGCTTCGACTCCCTGGCTGAGAAACTCTCTTTTCTCTGGTGGTGTGGTC
ATCAACAACAACATCATCTTCATGCTCGCAATGCCGCAGACGTCGGCGCC
GTACTCTGGCATGCTCACGAGGAAGCAGCAGTGGCGACGGGTGGAGAGCA
GAAGGCCCTACCTTCCAGGCTCGTCATCGCCGCCGCTTCAGACTGCCTCG
AGGCAGAAGACCCTCCAAGTCCGAGCGACTGCCGACGCGCGCATCCCCGA
GCAGCAACAGCAGCAGCAGCAGCAGCGGGATTGTTCCGTCGATGACGGGG
ATCGACACACACACCATTCGGACCCACGAGCCTCCCACATGTGAGTCCGT
GCGATATACTAGATTATGTATTTTTATAGATAATGTAATAAATAGCTGAT
GATGAAAACTCAACTACAGCAGTCTTGTAGTTTACTGTAAGTAGTAGAGT
TTGCAGCGACGTGCACCCCTTGAAGGAAGCTAGCTCGCTTATGATAGTGT
GCTTGCGGCTGTCCGCTGCAGAATCCGCATCTCAGTGTCCCGTGTCGGCA
CCGCAGTCGCTCCGGCGGGGTCCTGCTGCTACAAGTACAAGTATCTGTTC
CGTGTTGGTGGCTAAACTCAGAGTTTCACACAGAGTTTTTTATATCCAGC
CCGTGGAGTTTCAGTCAGCCCTCTCGGCCAAAGTATGTACAATGTACGTA
ATTTCTCGGGCTGTTTCCGTTTGCAAGCCCCCTCCAGGGCCCGAAGCGCC
CGCCCTTGGCGGCCTGCCGGGGGGCTTTCCGTCTCACATTTGCGCAGCCA
CCCAGCCCATTGCCTCGTCCGTGGGCATGGCGTGGTTGATGCTCTGTACG
TAGGCCGCGGATTGTTTTTTTATAATATAGAAAAGACGAGCCTTCTCGGC
AGAAGTGCGTGGTTCTCGGCTTAACAGAGTGTCGACAAGTTTGCTCGACC
CGAACAGTTCGCCGCCCTTGGTCTCCTGCCTGGGGCGTTTCGTCTCACGA
ACACCTCTCTGCTGCAGCCGTACCCTGCCCCCTATCTGCCCGTGGGCATG
GCGCGGTTTTGGAATTCCGTAACATGTATGCTACCTGGTATGATATATGC
ATAGGATATGTACACCGGTGATGGTCGTTTCCAAGTTCCAAGCCCAGTAT
TTACAATGCGATGACCACTGATGATGTGAGCTTGATTCAACTTTTTTACG
AACATCATTTTACAAGCAGTAAATATACAAGCAGTAAATATTGTCGGGCA
GCATTATATTGCAGGTGATTTGATTTGTTTGGCGCCCCAAAAGGTTTTGT
GATTTTCTTTCAGAAAAAAGGTTTTTGTGATTGAACAAGTAATTGCCGAT
GCAATGCATACACAGATGCACATGTCATAAAGAGCCACCGTATAATACTA
TTAATAGTGTACTGCTGCTTGTATCAATAGTTGTATCATGTGATACGGGG
TGTATAATACATCGTCGGGTAATCGTGGCGAACCCCTTCGCCAGCGCTGG
GGTGCTCCCAGGAGAAGCAGCTGCAGCCCTCCCCGTTTTGACTACCGTCT
GTTGTTCCATCTTGTTCAGGGGGTATGACACCATCGTCCTAGAAACAATA
GGGCTGGTCCGCCAATTACGTCACCATTGTAATTTAGTTAAGTCTTGTCC
GTTCTGTATTATAAATCTGTGTTCTGTGTGCAGTTACGGATGCATCTGCG
CACCCCTGCCCCATGCTATCGTACTTCATACTTGTACATGGACAGATTCA
ACCCAGATTCCACAGGTCAAGAAAAATAAGGGCGCAGCCCAAGAGAGGCC
GCCAATTACGCTTGTGTACAATTAAGCTGGTGTATTACTTGGTATGATAT
GTCTTTTTTTTTCCTTCTGAAAAATACAAGCCTGTATTTTATAAAAAAAC
GGAAACAAGCTCAAGAGTAGTGTAAAATCACATGGAAATCTCCAACTCTT
CCCAGAGACACACTCAAATTAATTATAACATCTCCGCCACACTTGAACCG
GGGATTTAGTTTCTGAGCATCCTCCAGCACTCGTTGAAGTCGCGCAAGCA
GTCAGGTCCAACGGGTTTGCTTCCTGAAGCACAAGCCGCTTTTCCGCGAC
GGTTGAATAACCATCGCCAATTTTGAAACAATTTTTCGCCTGGGCATGTG
GATCCACGAACTTCAACCTCCTCCATTGCTGTACGGGTAAAGCAAGAGTG
CGTGTACATATTAATAGTGTATCGCACAAACGAGCCACCGCCACACGCAC
AGCCCGAATCCACGCAAAACAGCCGAATCAGAAGGAGGGTTTCCTTCTTC
TACTTATTTTTTCCATCTGGTGTTCTTGTAAATTGAAATTGAAATTGAAA
TTAAATGTCAAAAGTAGAGTTCTGATGAGTTATTTTCTCACTCGACTCTT
GGCACACATCTGACCACAACTCTGGTCGGATATAAGCCGATAGGCTACTT
GTGTACGTGTGCAAATCAATCAATCGCCTTACCCCCAAAATCTCCTACTC
ACACCTCTCTCCGCGTCCCCTTGGTGCTCCCAACCAACTCGAACCCTACG
CAGCAGGTCTCTCTCAAGGACGAGAAGGCACGCTGGTATTCGGTACGTCA
AGCCGACCTCCCCCGCCGACCGCAAACGCCAAGGGAGCAAGTGCGACCTG
CTGGCAAACTCGGCCGGTGGTCTCGAAAGCCAATGCGACCGCCAACGGTC
GGCGAGCATGCCCCTTCCGCTAACCGAAGTCGACGGTGAGGCGGAGCCCG
AGGATAGGCAG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig912:18413..21323- >mRNA_S-dermatodea_contig912.17196.1 ID=mRNA_S-dermatodea_contig912.17196.1|Name=mRNA_S-dermatodea_contig912.17196.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=948bp|location=Sequence derived from alignment at S-dermatodea_contig912:18413..21323- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCTCGCAATGCCGCAGACGTCGGCGCCGTACTCTGGCATGCTCACGAG
GAAGCAGCAGTGGCGACGGGTGGAGAGCAGAAGGCCCTACCTTCCAGGCT
CGTCATCGCCGCCGCTTCAGACTGCCTCGAGGCAGAAGACCCTCCAAGTC
CGAGCGACTGCCGACGCGCGCATCCCCGAGCAGCAACAGCAGCAGCAGCA
GCAGCGGGATTGTTCCGTCGATGACGGGGATCGACACACACACCATTCGG
ACCCACGAGCCTCCCACATATGCTCGCAATGCCGCAGACGTCGGCGCCGT
ACTCTGGCATGCTCACGAGGAAGCAGCAGTGGCGACGGGTGGAGAGCAGA
AGGCCCTACCTTCCAGGCTCGTCATCGCCGCCGCTTCAGACTGCCTCGAG
GCAGAAGACCCTCCAAGTCCGAGCGACTGCCGACGCGCGCATCCCCGAGC
AGCAACAGCAGCAGCAGCAGCAGCGGGATTGTTCCGTCGATGACGGGGAT
CGACACACACACCATTCGGACCCACGAGCCTCCCACATGTCTCTCTCAAG
GACGAGAAGGCACGCTGGTATTCGGTACGTCAAGCCGACCTCCCCCGCCG
ACCGCAAACGCCAAGGGAGCAAGTGCGACCTGCTGGCAAACTCGGCCGGT
GGTCTCGAAAGCCAATGCGACCGCCAACGGTCGGCGAGCATGCCCCTTCC
GCTAACCGAAGTCGACGGTGAGGCGGAGCCCGAGGATAGGCAGGTCTCTC
TCAAGGACGAGAAGGCACGCTGGTATTCGGTACGTCAAGCCGACCTCCCC
CGCCGACCGCAAACGCCAAGGGAGCAAGTGCGACCTGCTGGCAAACTCGG
CCGGTGGTCTCGAAAGCCAATGCGACCGCCAACGGTCGGCGAGCATGCCC
CTTCCGCTAACCGAAGTCGACGGTGAGGCGGAGCCCGAGGATAGGCAG back to top
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