mRNA_S-dermatodea_contig91069.17186.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig91069.17186.1 vs. uniprot
Match: D7G508_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G508_ECTSI) HSP 1 Score: 65.1 bits (157), Expect = 4.120e-11 Identity = 33/48 (68.75%), Postives = 38/48 (79.17%), Query Frame = 1
Query: 1 VQVTDDEKSLIVVNELSGELFRVDPVTGEAALIDLGGALIKGGDGLVI 144
+ +TDD SLI+VN SGELF VDP TG+A LIDLGG LI GGDGLV+
Sbjct: 190 IVITDDLSSLIIVNYQSGELFAVDPDTGKATLIDLGGDLILGGDGLVL 237
BLAST of mRNA_S-dermatodea_contig91069.17186.1 vs. uniprot
Match: A0A538QL70_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A538QL70_9DELT) HSP 1 Score: 55.5 bits (132), Expect = 2.320e-8 Identity = 27/48 (56.25%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 1 VQVTDDEKSLIVVNELSGELFRVDPVTGEAALIDLGGALIKGGDGLVI 144
++ T + KSLIVVN G L+RVDP TG+A LIDLGG + GDGL++
Sbjct: 6 IEATANGKSLIVVNSALGTLYRVDPGTGDARLIDLGGVSVVNGDGLLL 53
BLAST of mRNA_S-dermatodea_contig91069.17186.1 vs. uniprot
Match: A0A1G9YHJ4_ALLAB (Sugar lactone lactonase YvrE n=2 Tax=Allokutzneria albata TaxID=211114 RepID=A0A1G9YHJ4_ALLAB) HSP 1 Score: 57.0 bits (136), Expect = 3.120e-8 Identity = 25/47 (53.19%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 1 VQVTDDEKSLIVVNELSGELFRVDPVTGEAALIDLGGALIKGGDGLV 141
++ T D ++L+VVN +G+LFRVDP TG A L+DLGG ++ GDGL+
Sbjct: 180 IETTPDGRNLLVVNSTTGKLFRVDPRTGSAKLVDLGGVVLTNGDGLL 226
BLAST of mRNA_S-dermatodea_contig91069.17186.1 vs. uniprot
Match: A0A399Z9Q0_9CHLR (Superoxide dismutase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A399Z9Q0_9CHLR) HSP 1 Score: 57.0 bits (136), Expect = 3.180e-8 Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 1 VQVTDDEKSLIVVNELSGELFRVDPVTGEAALIDLGGALIKGGDGLVI 144
+ T D KSL++VN G+L+ VDP TG A+LIDLGG + GDG+++
Sbjct: 187 IDATPDGKSLVIVNSAEGKLYHVDPATGHASLIDLGGGAVPNGDGILL 234
BLAST of mRNA_S-dermatodea_contig91069.17186.1 vs. uniprot
Match: A0A6H5JGY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY3_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 3.450e-8 Identity = 31/47 (65.96%), Postives = 34/47 (72.34%), Query Frame = 1
Query: 4 QVTDDEKSLIVVNELSGELFRVDPVTGEAALIDLGGALIKG-GDGLV 141
Q TDD +LI+VN S +LF VDP TG A LIDLGG LI G GDGLV
Sbjct: 47 QATDDGSALIIVNSESQQLFAVDPDTGAATLIDLGGELIPGSGDGLV 93
BLAST of mRNA_S-dermatodea_contig91069.17186.1 vs. uniprot
Match: A0A5B8C4V2_9MICO (Superoxide dismutase n=2 Tax=Georgenia yuyongxinii TaxID=2589797 RepID=A0A5B8C4V2_9MICO) HSP 1 Score: 56.6 bits (135), Expect = 4.390e-8 Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 1
Query: 1 VQVTDDEKSLIVVNELSGELFRVDPVTGEAALIDLGGALIKGGDGLVI 144
++ T D ++L+VVN + GEL+RVDP TGEA +DLGG + GDGLV+
Sbjct: 190 IEQTPDGRALLVVNTIRGELYRVDPRTGEADRVDLGGTSVLNGDGLVL 237
BLAST of mRNA_S-dermatodea_contig91069.17186.1 vs. uniprot
Match: A0A538Q0N0_9DELT (Superoxide dismutase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A538Q0N0_9DELT) HSP 1 Score: 55.5 bits (132), Expect = 1.120e-7 Identity = 27/48 (56.25%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 1 VQVTDDEKSLIVVNELSGELFRVDPVTGEAALIDLGGALIKGGDGLVI 144
++ T + KSLIVVN G L+RVDP TG+A LIDLGG + GDGL++
Sbjct: 174 IEATANGKSLIVVNSALGTLYRVDPGTGDARLIDLGGVSVVNGDGLLL 221
BLAST of mRNA_S-dermatodea_contig91069.17186.1 vs. uniprot
Match: A0A1H1RBT0_9MICO (Uncharacterized protein n=1 Tax=Agromyces flavus TaxID=589382 RepID=A0A1H1RBT0_9MICO) HSP 1 Score: 55.5 bits (132), Expect = 1.140e-7 Identity = 24/46 (52.17%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 10 TDDEKSLIVVNELSGELFRVDPVTGEAALIDLGGALIKGGDGLVIV 147
T D ++L+V+ + LFRVDP TGEA +DLGGA++ GDGL++V
Sbjct: 195 TPDHQALLVIQSSTATLFRVDPTTGEATAVDLGGAMLAAGDGLLVV 240
BLAST of mRNA_S-dermatodea_contig91069.17186.1 vs. uniprot
Match: UPI0010AA7333 (superoxide dismutase n=1 Tax=Agromyces sp. H66 TaxID=2529859 RepID=UPI0010AA7333) HSP 1 Score: 55.5 bits (132), Expect = 1.150e-7 Identity = 25/47 (53.19%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 1 VQVTDDEKSLIVVNELSGELFRVDPVTGEAALIDLGGALIKGGDGLV 141
++ T D K+L+VV+ +G LFRVDP +G+A +DLGGAL+ GDGL+
Sbjct: 194 IETTADRKALLVVHSSTGTLFRVDPDSGQATAVDLGGALLLNGDGLL 240
BLAST of mRNA_S-dermatodea_contig91069.17186.1 vs. uniprot
Match: UPI001EF6E984 (hypothetical protein n=1 Tax=Microbacterium TaxID=33882 RepID=UPI001EF6E984) HSP 1 Score: 55.5 bits (132), Expect = 1.210e-7 Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 1
Query: 10 TDDEKSLIVVNELSGELFRVDPVTGEAALIDLGGALIKGGDGLVIV 147
T D K+L+V+ +G LFRVDP TGEA +DLGGA ++ GDG++++
Sbjct: 197 TTDHKALLVIQSSTGTLFRVDPATGEADAVDLGGASLQFGDGILVI 242 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig91069.17186.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig91069.17186.1 >prot_S-dermatodea_contig91069.17186.1 ID=prot_S-dermatodea_contig91069.17186.1|Name=mRNA_S-dermatodea_contig91069.17186.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=49bp VQVTDDEKSLIVVNELSGELFRVDPVTGEAALIDLGGALIKGGDGLVIVback to top mRNA from alignment at S-dermatodea_contig91069:263..409- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig91069.17186.1 ID=mRNA_S-dermatodea_contig91069.17186.1|Name=mRNA_S-dermatodea_contig91069.17186.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=147bp|location=Sequence derived from alignment at S-dermatodea_contig91069:263..409- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig91069:263..409- >mRNA_S-dermatodea_contig91069.17186.1 ID=mRNA_S-dermatodea_contig91069.17186.1|Name=mRNA_S-dermatodea_contig91069.17186.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=294bp|location=Sequence derived from alignment at S-dermatodea_contig91069:263..409- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |