mRNA_S-dermatodea_contig91.17176.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig91.17176.1
Unique NamemRNA_S-dermatodea_contig91.17176.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig91.17176.1 vs. uniprot
Match: D7FPM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM1_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 1.290e-93
Identity = 175/346 (50.58%), Postives = 203/346 (58.67%), Query Frame = 1
Query:   34 EREDVFGSLFDDGNSSDGDDA--HDNDPALVELVHVRTKAAGRAS------PVPPTLRLSLVSSRHSLWGHRLWNAALLLAEMFETSDIDVEGKTVLELGAGAGLPGLVCALKGARKVVISDYSTSTDQTLMVPIQMNIERIQPEFVPRETLYAVGHVWGHPVEDLLEPLTVPAPSVCQSTGNRPPVKQSNDGG----GRKAA------------------------------VDENVSR----------------------GPGEGFDVVIMADLLFNRSQHAQLLDSCDRCL-GRSKEA------------TAWVSFSHHDPEKAELDMNFFAVARQKGFIATK 840
            E +D FG LFD  ++SD       +  PALVE  + RT   G A       P P TL+LSLV+SRHSLWGHRLWNAALLLA+M +  + DV GK VLELGAGAGLP L+CALKGA KVVISDY+TSTD  LMVPIQ+NI+R+QPEFVP  TL+AVGHVWG  VEDLL PL          TG+   ++  N GG    G K A                               +E V+                       G GEGFDVVIMADLLFNRSQHAQLL++CDRCL GR                T WVSFSHHDPEKAELDM FF +A++KGF+AT+
Sbjct:    4 EDQDGFGGLFDGASASDXXXXXXEETGPALVEEEYTRTPPKGSAEGRGALPPRPSTLKLSLVNSRHSLWGHRLWNAALLLADMVDKDEFDVRGKRVLELGAGAGLPALICALKGATKVVISDYATSTDAALMVPIQINIDRVQPEFVPEGTLHAVGHVWGQAVEDLLVPLR---------TGSSLSLRHENGGGSSSDGEKNASLGSGAAXXXXXXXXXXXXXXAGAPVQDTGTEEEVASVHGQGEGSPRSCHRARPIGGGGGDGEGFDVVIMADLLFNRSQHAQLLETCDRCLLGRGSXXXXXXXXXXXXXXTVWVSFSHHDPEKAELDMKFFELAKEKGFVATR 340          
BLAST of mRNA_S-dermatodea_contig91.17176.1 vs. uniprot
Match: A0A6H5JE74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE74_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 3.030e-65
Identity = 126/256 (49.22%), Postives = 147/256 (57.42%), Query Frame = 1
Query:  256 MFETSDIDVEGKTVLELGAGAGLPGLVCALKGARKVVISDYSTSTDQTLMVPIQMNIERIQPEFVPRETLYAVGHVWGHPVEDLLEPLTV------------------------------------------PAPSVCQSTGNRPPVK------QSNDGGGRKAAVDENVSRGPGEGFDVVIMADLLFNRSQHAQLLDSCDRCL-GRSKEA------------TAWVSFSHHDPEKAELDMNFFAVARQKGFIATK 840
            M +  ++DV GK VLELGAGAGLP L+CALKGA KVVISDY+TSTD  LMVPIQ+NI+R+QPEFVP  TL+AVGHVWG  VEDL  PL                                             A +  Q+TG    ++      + + GGG           G GEGFDVVIMADLLFNRSQHAQLL++C RCL GR                T WVSFSHHDPEKAELDM FF +A+ KGF+AT+
Sbjct:    1 MVDKDELDVRGKRVLELGAGAGLPSLICALKGATKVVISDYATSTDAALMVPIQINIDRVQPEFVPEGTLHAVGHVWGQAVEDLRAPLRTGSSLSLRHDNGVGSRSDGEKNVILGSVAADXXXXXXXXXXXXXAGAPVQATGTEEEIESGYGQGEGSPGGGCHRTRPIAGGGGDGEGFDVVIMADLLFNRSQHAQLLETCGRCLLGRGSXXXXXXXXXXXXXXTMWVSFSHHDPEKAELDMKFFELAKDKGFVATR 256          
BLAST of mRNA_S-dermatodea_contig91.17176.1 vs. uniprot
Match: A0A836CF85_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF85_9STRA)

HSP 1 Score: 194 bits (493), Expect = 2.730e-57
Identity = 103/215 (47.91%), Postives = 132/215 (61.40%), Query Frame = 1
Query:  169 PPTLRLSLVSSRHSLWGHRLWNAALLLAEMFETSDIDVEGKTVLELGAGAGLPGLVCALKGARKVVISDYSTSTDQTLMVPIQMNIERIQPEFVPRETLYAVGHVWGHPVEDLLEPLTVPAPSVCQSTGNRPPVKQSNDGGGRKAAVDENVSRGPGEGFDVVIMADLLFNRSQHAQLLDSCDRCLGRSKEATAWVSFSHHDPEKAELDMNFFAVA 813
            P TL L+LVSSRHSLWGH LWNA++ LAEMF+  ++D++GKTVLELGAGAGLPGL+ AL GA  V+I+DY TS D TL+  I+ NI+ + P  VP+E L+A  HVWG  V+ LL+ L                                    G G  FDV+++ADLLFNRS+H +LL +C   L      T WV++ HHDP KA LD+ FF +A
Sbjct:    5 PSTLTLTLVSSRHSLWGHLLWNASIRLAEMFDGGEVDLKGKTVLELGAGAGLPGLIAALCGASTVLITDYGTSVDHTLVEAIRRNIDALSPH-VPKECLHAAPHVWGGSVQPLLDVL------------------------------------GEGHKFDVILLADLLFNRSEHRKLLQTCSTALAPG--GTVWVTWGHHDPPKAPLDLKFFEIA 180          
BLAST of mRNA_S-dermatodea_contig91.17176.1 vs. uniprot
Match: K8Z697_NANGC (Nicotinamide n-methyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z697_NANGC)

HSP 1 Score: 189 bits (479), Expect = 1.690e-54
Identity = 115/267 (43.07%), Postives = 154/267 (57.68%), Query Frame = 1
Query:   34 EREDVFGSLF---DDGNSSDGDDAHDNDPALVELVHVRTKAAGRASPVPPTLRLSLVSSRHSLWGHRLWNAALLLAEMFETSDIDVEGKTVLELGAGAGLPGLVCALKGARKVVISDYSTSTDQTLMVPIQMNIERIQPE-FVPRETLYAVGHVWGHPVEDLLEPLTVPAPSVCQSTGNRPPVKQSNDGGGRKAAVDENVSRGPGEGFDVVIMADLLFNRSQHAQLLDSCDRCLGRSKEATAWVSFSHHDPEKAELDMNFFAVARQK 822
            E E    SLF   D  N S  +++ + D + +   H  T+    A P+   L +SL+S RHSLWGH+LWNAA +L EM ++    V+GK  LELGAGA LP L+ AL GAR+VV SDY+TSTD+ L+  +Q NI+R+  + F+P + L AVG+VWG P+  LL PL                  Q   GGG        VS+     F V++ ADL+FNRS+H +LL +C  CL    E    V++SHHDP K  LDM FFA+A Q+
Sbjct:   23 ELEQGLLSLFATSDKANPSSAENSGEEDSSPMLTTHTYTRRDPTALPLE--LEISLLSCRHSLWGHKLWNAAKVLGEMIDSRPSLVQGKYCLELGAGAALPSLLAALNGARRVVCSDYATSTDRVLVAAMQTNIDRLVAQAFLPHDVLRAVGYVWGQPINSLLAPL------------------QEEKGGG--------VSK-----FQVILCADLIFNRSEHKKLLWTCKTCLEEDGEVL--VTYSHHDPGKRALDMAFFALATQE 254          
BLAST of mRNA_S-dermatodea_contig91.17176.1 vs. uniprot
Match: A0A482T280_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T280_9ARCH)

HSP 1 Score: 145 bits (366), Expect = 5.920e-37
Identity = 103/297 (34.68%), Postives = 146/297 (49.16%), Query Frame = 1
Query:   34 EREDVFGSLFDDGNSSDGDDAHDNDPALVELV-------HVRTKAAGRASPVPPTLRLSLVSSRHSLWGHRLWNAALLLAEMFETSDIDVEGKTV---------------LELGAGAGLPGLVCALKGARKVVISDYSTSTDQTLMVPIQMNIERIQPEFVPRETLYAVGHVWGHPVEDLLEPLTVPAPSVCQSTGNRPPVKQSNDGGGRKAAVDENVSRGPGEG------------FDVVIMADLLFNRSQHAQLLDSCDRCLGRSKEATAWVSFSHHDPEKAELDMNFFAVARQK 822
            E E+   SLF  G +SD +D  DND  +           H   +  G  +     L+L+L++  HSLW   ++NAA L+A++      D     +               LELGAGAGLPG++ A+ GAR+VVISDY +  D +L+ PI  N+E I+        L+AV + WG+P+     PLT        +T        S D     A V    SR  G+G            FD + +ADL+FNRS+H +LL +   CL   K    +V+FSHHDP KA LD+NFF +A ++
Sbjct:   34 EEEEQLQSLF--GVNSDDEDCSDNDMNITLKYDSYSLSNHCALEKVGNTN----VLQLALLNKHHSLWAEFIYNAARLMADIIVLPQADGSNSAIENALPPIVIESSDNCLELGAGAGLPGIMAAVCGARRVVISDYGSDLDLSLIYPIDSNVEYIKRICSSVAELHAVAYTWGYPIY----PLT-------NTTQYYQHTDTSLDLTSYAAYVQSKTSRRVGKGDHHGIMIEDYEKFDKIFLADLVFNRSEHRKLLWTVRECLKPDK-GVCYVTFSHHDPSKAALDLNFFTLAEEE 312          
BLAST of mRNA_S-dermatodea_contig91.17176.1 vs. uniprot
Match: K1WTS8_MARBU (Protein N-terminal and lysine N-methyltransferase EFM7 n=1 Tax=Marssonina brunnea f. sp. multigermtubi (strain MB_m1) TaxID=1072389 RepID=K1WTS8_MARBU)

HSP 1 Score: 142 bits (358), Expect = 2.310e-35
Identity = 93/226 (41.15%), Postives = 128/226 (56.64%), Query Frame = 1
Query:  175 TLRLSLVSSRHSLWGHRLWNAALLLAEMFETSDIDVEGKTVLELGAGAGLPGLVCALKGARKVVISDYSTSTDQTLMVPIQMNIERIQP----EFVPRETLYAVGHVWGHPVEDLLEPLTVPAPSVCQSTGNRPPVKQSNDGGGRKAAVDENVSRGPGEGFDVVIMADLLFNRSQHAQLLDSCDRCLGRSKEATAWVSFSHHDPEKAELDMNFFAVARQKGFIATK 840
            TL +SLV   + LWGH LWNA  L++   E +   +  KT+LELGAGAGLP LVCA  GA+KV+++DY    D  L+  ++ NI+            +++L A G+ WG  V+ LL  L  PA +   STG            G +AA  +       +GFDV+I+ADLLFN S+HA+LL + +R L R  +A A V F+ + P   E DM FFA+AR +GF   K
Sbjct:  141 TLTVSLVG-HNPLWGHHLWNAGRLISTYLEKNPSLIANKTILELGAGAGLPSLVCAEIGAKKVLVTDYP---DPDLIANLRQNIDAYYSTPGRRCSNKQSLAAEGYCWGADVQPLLAYL--PAAAAAPSTG-----------AGVEAASLQ-------QGFDVLILADLLFNHSEHAKLLATIERTLRRGSDAQALVFFTPYRPWLFERDMAFFALARARGFAVEK 342          
BLAST of mRNA_S-dermatodea_contig91.17176.1 vs. uniprot
Match: A0A5C3MPF6_9AGAM (Uncharacterized protein n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3MPF6_9AGAM)

HSP 1 Score: 136 bits (342), Expect = 6.760e-35
Identity = 80/217 (36.87%), Postives = 118/217 (54.38%), Query Frame = 1
Query:  178 LRLSLVSSRHSLWGHRLWNAALLLAEMFETSDIDVEGKTVLELGAGAGLPGLVCALKGARKVVISDYSTSTDQTLMVPIQMNIERIQPEFVPRETLYAVGHVWGHPVEDLLEPLTVPAPSVCQSTGNRPPVKQSNDGGGRKAAVDENVSRGPGEGFDVVIMADLLFNRSQHAQLLDSCDRCLGRSKEATAWVSFSHHDPEKAELDMNFFAVARQKGF 828
            +++ LV S H LWGH LWNAA   A   +      EG+TVLELGAG GLPG+VCAL GA+KV+++DY    D+ L+  +Q N++ +  E   ++ +   G++WG  V+ LL PLT                                     G GFD++I++DL+FN SQH  LL +C+  + +S  A   V ++HH P+ A+ D+ FF  AR+ G+
Sbjct:    3 VKIRLVGS-HPLWGHHLWNAARAFASYLDEHRDIYEGRTVLELGAGGGLPGIVCALNGAKKVMLTDYP---DRELVENMQYNVD-VNLEEQRKKNVVVQGYLWGQSVDSLL-PLTP-----------------------------------DGVGFDLIILSDLVFNHSQHDALLKTCNLAVSKSSTACMLVFYTHHRPKYAQRDLEFFTKARKAGW 178          
BLAST of mRNA_S-dermatodea_contig91.17176.1 vs. uniprot
Match: A0A0C3CSN7_9PEZI (Protein N-terminal and lysine N-methyltransferase EFM7 n=1 Tax=Oidiodendron maius Zn TaxID=913774 RepID=A0A0C3CSN7_9PEZI)

HSP 1 Score: 137 bits (345), Expect = 8.510e-35
Identity = 103/274 (37.59%), Postives = 133/274 (48.54%), Query Frame = 1
Query:   19 GIVEGEREDVFGSLFDDGNSSDGDDAHDNDPALVELVHVRTKAAGRASPVPPTLRLSLVSSRHSLWGHRLWNAALLLAEMFETSDIDVEGKTVLELGAGAGLPGLVCALKGARKVVISDYSTSTDQTLMVPIQMNIERIQPEFVPRETLYAVGHVWGHPVEDLLEPLTVPAPSVCQSTGNRPPVKQSNDGGGRKAAVDENVSRGPGEGFDVVIMADLLFNRSQHAQLLDSCDRCLGRSKEATAWVSFSHHDPEKAELDMNFFAVARQKGFIATK 840
            G VEG+ E +   LF        + A+   P+        T  +G+      TL L LV   + LWGH LWNA  LL+   E     + G+TVLELGAGAGLP LVC   GA KVV+SDY    D  L+  +  NIE    E   RET+ A G+ WG  V  LL                           G   A  E       EGFDV+I+ADLLFN S+HA+L+ +    L +S++A A V F+ + P   E DM FF +AR+ GF+  K
Sbjct:   10 GEVEGDSETL--DLF-------AEPANYYPPSPTPTTETHTLRSGQ------TLTLRLVG-HNPLWGHHLWNAGRLLSAYLEGHPSLIIGRTVLELGAGAGLPSLVCGCLGASKVVVSDYP---DPDLVSNLWHNIENRPNEI--RETVVAEGYCWGADVGPLL---------------------------GHLEARKE-------EGFDVLILADLLFNHSEHAKLITTMKETLAKSRDAVALVFFTPYRPWLYEKDMTFFDLARRAGFVVEK 228          
BLAST of mRNA_S-dermatodea_contig91.17176.1 vs. uniprot
Match: A0A167G3H7_CALVF (Uncharacterized protein n=1 Tax=Calocera viscosa (strain TUFC12733) TaxID=1330018 RepID=A0A167G3H7_CALVF)

HSP 1 Score: 136 bits (342), Expect = 1.680e-34
Identity = 85/224 (37.95%), Postives = 120/224 (53.57%), Query Frame = 1
Query:  178 LRLSLVSSRHSLWGHRLWNAALLLAEMFETSDIDVEGKTVLELGAGAGLPGLVCALKGARKVVISDYSTSTDQTLMVPIQMNIERIQPEFVPRETLYAVGHVWGHPVEDLLEPLTVPAPSVCQSTGNRPPVKQSNDGGGRKAAVDENVSRGPGEGFDVVIMADLLFNRSQHAQLLDSCDRCLG---RSKEATAWVSFSHHDPEKAELDMNFFAVARQKGFIATK 840
            L + LV S H LWGH LWN+ + LA+  E +     G+TVLELGAG GLP LV AL+GARK V++DY    D+ L+  +++NIE+  PE + R T+ A+G+VWG     LL        S  Q                            P + FD+V+++DL+FN SQH  L+ SC+       +S E +  V ++HH P  AE D+ FF +A  +G+I  K
Sbjct:   35 LNIRLVGS-HPLWGHYLWNSGICLAKYLEHTPALYLGRTVLELGAGGGLPALVTALRGARKTVVTDYP---DRALVENLEVNIEQNVPE-MQRGTVAALGYVWGADTAPLL--------SAIQ----------------------------PSKHFDLVLLSDLVFNHSQHEALIKSCELLTDLHPQSDEPSVLVFYTHHRPHLAEKDLGFFTLAESRGWICEK 217          
BLAST of mRNA_S-dermatodea_contig91.17176.1 vs. uniprot
Match: A0A165P4X5_9AGAM (Protein N-terminal and lysine N-methyltransferase EFM7 n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165P4X5_9AGAM)

HSP 1 Score: 134 bits (338), Expect = 8.770e-34
Identity = 81/238 (34.03%), Postives = 118/238 (49.58%), Query Frame = 1
Query:  109 PALVELVHVRTKAAGRASPVPPTLRLSLVSSRHSLWGHRLWNAALLLAEMFETSDIDVEGKTVLELGAGAGLPGLVCALKGARKVVISDYSTSTDQTLMVPIQMNIERIQPEFVPRETLYAVGHVWGHPVEDLLEPLTVPAPSVCQSTGNRPPVKQSNDGGGRKAAVDENVSRGPGEGFDVVIMADLLFNRSQHAQLLDSCDRCLGRSKEATAWVSFSHHDPEKAELDMNFFAVARQK 822
            P     ++ R K           +R+ LV S H LWGH LWNAA   A   + +     G +VLELGAG GLPG+VCAL GAR+ V++DY    D+ L+  +  N++   PE   RE++   G++WG  ++ LL  LT                                     G GFD++I++DL+FN SQH  LL +CD  L +   A+  V ++HH P+ A+ D+ FF  A ++
Sbjct:   23 PPATSSIYTREKPLCARDDTWREVRIRLVGS-HPLWGHYLWNAARAFASYLDQNKEIYAGGSVLELGAGGGLPGIVCALNGARQTVLTDYP---DKELVDNLMNNVQENLPE-ARRESVVVQGYIWGQSIDSLLS-LTP-----------------------------------EGRGFDLIILSDLVFNHSQHDALLKTCDLSLSKVSTASVLVFYTHHRPQYAQRDLEFFKKAEER 219          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig91.17176.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPM1_ECTSI1.290e-9350.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JE74_9PHAE3.030e-6549.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CF85_9STRA2.730e-5747.91Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
K8Z697_NANGC1.690e-5443.07Nicotinamide n-methyltransferase n=3 Tax=Monodopsi... [more]
A0A482T280_9ARCH5.920e-3734.68Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
K1WTS8_MARBU2.310e-3541.15Protein N-terminal and lysine N-methyltransferase ... [more]
A0A5C3MPF6_9AGAM6.760e-3536.87Uncharacterized protein n=1 Tax=Heliocybe sulcata ... [more]
A0A0C3CSN7_9PEZI8.510e-3537.59Protein N-terminal and lysine N-methyltransferase ... [more]
A0A167G3H7_CALVF1.680e-3437.95Uncharacterized protein n=1 Tax=Calocera viscosa (... [more]
A0A165P4X5_9AGAM8.770e-3434.03Protein N-terminal and lysine N-methyltransferase ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig91contigS-dermatodea_contig91:33724..37728 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score290.4
Seed ortholog evalue9.6e-76
Seed eggNOG ortholog2880.D7FPM1
Preferred nameEFM7
KEGG koko:K17878
GOsGO:0000183,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006325,GO:0006342,GO:0006355,GO:0006464,GO:0006479,GO:0006480,GO:0006766,GO:0006767,GO:0006769,GO:0006807,GO:0006996,GO:0008112,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009820,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016278,GO:0016279,GO:0016458,GO:0016740,GO:0016741,GO:0017144,GO:0018013,GO:0018022,GO:0018027,GO:0018193,GO:0018201,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031365,GO:0032259,GO:0034641,GO:0036211,GO:0040029,GO:0043170,GO:0043412,GO:0043414,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051186,GO:0051252,GO:0051253,GO:0051276,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0071885,GO:0072524,GO:0080090,GO:0140096,GO:1901360,GO:1901564,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.peptidase activity, acting on L-amino acid peptides
EggNOG OGsCOG3897@1,KOG2920@2759
EC2.1.1.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Exons5
Model size1039
Cds size912
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925386.2969995-UTR-S-dermatodea_contig91:33723..338381622925386.2969995-UTR-S-dermatodea_contig91:33723..33838Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig91 33724..33838 -
1694079898.509593-UTR-S-dermatodea_contig91:33723..338381694079898.509593-UTR-S-dermatodea_contig91:33723..33838Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig91 33724..33838 -
1622925386.3750072-UTR-S-dermatodea_contig91:37716..377281622925386.3750072-UTR-S-dermatodea_contig91:37716..37728Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig91 37717..37728 -
1694079898.5778043-UTR-S-dermatodea_contig91:37716..377281694079898.5778043-UTR-S-dermatodea_contig91:37716..37728Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig91 37717..37728 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925386.3106248-CDS-S-dermatodea_contig91:33838..339141622925386.3106248-CDS-S-dermatodea_contig91:33838..33914Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig91 33839..33914 -
1694079898.5229373-CDS-S-dermatodea_contig91:33838..339141694079898.5229373-CDS-S-dermatodea_contig91:33838..33914Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig91 33839..33914 -
1622925386.325846-CDS-S-dermatodea_contig91:34226..347291622925386.325846-CDS-S-dermatodea_contig91:34226..34729Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig91 34227..34729 -
1694079898.5336-CDS-S-dermatodea_contig91:34226..347291694079898.5336-CDS-S-dermatodea_contig91:34226..34729Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig91 34227..34729 -
1622925386.33917-CDS-S-dermatodea_contig91:35220..353121622925386.33917-CDS-S-dermatodea_contig91:35220..35312Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig91 35221..35312 -
1694079898.5441191-CDS-S-dermatodea_contig91:35220..353121694079898.5441191-CDS-S-dermatodea_contig91:35220..35312Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig91 35221..35312 -
1622925386.353849-CDS-S-dermatodea_contig91:35680..358531622925386.353849-CDS-S-dermatodea_contig91:35680..35853Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig91 35681..35853 -
1694079898.5549247-CDS-S-dermatodea_contig91:35680..358531694079898.5549247-CDS-S-dermatodea_contig91:35680..35853Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig91 35681..35853 -
1622925386.3630261-CDS-S-dermatodea_contig91:37648..377161622925386.3630261-CDS-S-dermatodea_contig91:37648..37716Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig91 37649..37716 -
1694079898.56587-CDS-S-dermatodea_contig91:37648..377161694079898.56587-CDS-S-dermatodea_contig91:37648..37716Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig91 37649..37716 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig91.17176.1prot_S-dermatodea_contig91.17176.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig91 33839..37716 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig91.17176.1

>prot_S-dermatodea_contig91.17176.1 ID=prot_S-dermatodea_contig91.17176.1|Name=mRNA_S-dermatodea_contig91.17176.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=304bp
MGGIVEGEREDVFGSLFDDGNSSDGDDAHDNDPALVELVHVRTKAAGRAS
PVPPTLRLSLVSSRHSLWGHRLWNAALLLAEMFETSDIDVEGKTVLELGA
GAGLPGLVCALKGARKVVISDYSTSTDQTLMVPIQMNIERIQPEFVPRET
LYAVGHVWGHPVEDLLEPLTVPAPSVCQSTGNRPPVKQSNDGGGRKAAVD
ENVSRGPGEGFDVVIMADLLFNRSQHAQLLDSCDRCLGRSKEATAWVSFS
HHDPEKAELDMNFFAVARQKGFIATKPRRFRCETCSRRTTGWMTYEAKCT
CGT*
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mRNA from alignment at S-dermatodea_contig91:33724..37728-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig91.17176.1 ID=mRNA_S-dermatodea_contig91.17176.1|Name=mRNA_S-dermatodea_contig91.17176.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4005bp|location=Sequence derived from alignment at S-dermatodea_contig91:33724..37728- (Saccorhiza dermatodea SderLu1190fm monoicous)
CTAAACTGATTGATGGGGGGAATCGTGGAGGGGGAGCGCGAAGATGTCTT CGGATCGTTGTTCGACGATGGAAATTCCAGGTGCTCTCTTCCAAACTGCG CCTGACTGCGGTTTTATGTTTGAATTGGGTACTCTTCCAAGCTGCGGGCT GTAACATATGCCCCCGCAATTTTCTGCGATAAACGCCGTCGAGCGGTTTG TAGCGATGCTGATCCCGAGAGAAACGTGGCGTCTTCTAGAAGGGCTCACC GTCGCCACTTCAGGGATGCACGCATTAACGTATACGCATTACCCTGTAGA TACCGCCAGCCGCACATCCCTGGCACGGCAGAGATACTCGGCAGATGCAT GCATGTGTTGTATGTCAGGATCTGTGGTGTACTACTTGACTTACTGTATG TACGAAATCGTCGCTTTTGCACCTTCTCTCTGAAGTTGCCCAACGGTGGG CTGAAGCGGAGGAAGTTGGGGCATGAGCATTTCCCAAGTGCCAGAGGAAA ATCCAGCATGTGCTGGTACGTTTAGATTAGTGGCATATCATGAAGGCGCG AGTCAGTACTGCTCGGTAGCTGGGGGTAGACCCCCATATGAACAGCACGC TGGTAACATTACAACGAACGTTTTTTTCATATAATAGCGATTTAGACTTG AGGCGGTGAAACATCTGCGAAGCAAAGAGAAGGATTTTTCACCTCACGGG CTCACGGGCGAGCCCGTGGCTACCAACTATTGATGTAATACAGTAGTACT AGTAGTACTCTGTACAAACCTACTATACTAAGTACGCAGATACGGCAGGA GGAGTATGACACTACGTAGTCAAATCGCTCAAGAGCGTCAAGTACGGCGA TGCGGGATGAGTCAATTTACGATACGGAAGAGCGTCCATCGTTGTTGTTG TTGTTATTGTTGGACACATATTACAGACTTGCTTTTCCGAGGTCCGTCTG TCGTCACAAGGGACCATCCCATCTCTCCCCGGTTCTCACCTTTGATTTTA TCGCAAATGCATTGGGTTCGGCACTCCCACAGGTCGCCGATTTCTCGGAT TTTTGCATTTTTCCTCTCGCGCTTTCCGCGGCGGGGTAGAGGAATTGTAT AAATATCGACTCTGCCGGGATTTGAACATTAACATTTGAATCCGGGTCCT CCGCCTACTGGGCTGTTGGTCAACCAGTTCAACCACGGGGCGGAGGACCA GTACGCAGTAAAATATCGTCAGAAACAGGAAAAGAGAAGCCAACGTCGCA TTGTTTTTTAAGATGTACCAGGTAAGAAGGATGAAATATGTCTCTTATGT GTGGGGACCGTGGGGCAGCCGGTGCCCTGCAAAAGGTAAGTTCCGTCGCG CGTAATAATCGTGTGTATGTTCACCTTTTCGACGATTCAATCAACGAACG GGGGGAAGGGGGGGGGGGGGAGGGGGTGTTGGGGGGAGGTATGAACATTC GTTGATGCTCACAAACGCCGCAAAGCTTTTGAGGAAAGGGATCGAGAATG TGTCACAAGGAACGCTACCGTGTTGTACGACCTCCTACTACCGCTGCCCT ATGCATACAAGTATCGAAAATATACTCTCTCGACCACAAAGTATAGAGCT CTATACTCGGAGAACTTGCTCTGAAGATCCACCACGAAAGAGATAGTTGT ACGTACCCCGTGCGTTCGGGGCCAACTTTGCCGTGACCTTTAGCATTTCG TCATCGCGGGCATTTTTTGCTATCTGACGCCCCCACGGTTGGCAAGGTTT TGGTCGCGATACCGTAGCACAGAGTGGAGCATTCCGGCGTAGTGGATTAC CGTAAAGAATCCTGCAGCACAACACCAACCACCAAGCTCCCGACAATCGC TCCATTCATTGTTGACCAAATGCAGCGATGGAGATGACGCACACGACAAC GATCCTGCTCTAGTGGAATTGGTGCATGTCAGGACGAAAGCTGCAGGCAG AGCTTCGCCGGTGCCGCCGACACTACGACTCTCACTAGTCAGCTCTCGCC ACAGCTTGTGGGGGCATCGCCTGTGGAACGCGGCCCTCCTTCTTGCGGGT GAGCATGATCTCCACAGATTAGTTTCGCGGCTATCGTAGTACTGCATACA GTCGTATCGTGTGGTGCGCTGTTCGTAATCCTGAGCAAAGTGTGGTCATG CAACGACCTGGCAGTTTGTTCGGTGCCTTGCGGGGCGGGCAAAGTTTGGA GTGCCCAGGATATTTTTGCGCACTGAACGAAGGATCCGATTTGAAGAAGC GCGTGATTGCAGGTCGCGACCATGTCACACTTTCTTGTACATAATTAACT CTGTTTGTTCCCTGGCGCACACGCAGTCCCATCGTACAAGTTGTGGTTCG TTGGTGTGCAATTTAACCTACCGCCCCACCCCCCACCACGCCGCGCTCGC GCCTAACCTCCTGTAGAAATGTTCGAAACTAGCGACATTGACGTTGAGGG AAAGACCGTACTCGAGTTGGGCGCTGGAGCGGGACTCCCAGGGCTTGTAT GCGCTCTGGTGAGGAAGCGTTGTCTGTGGCGGCGCTACTTCGAAATGAGG GATACGTTTCAAATGAAGGATGCATTTTCCTTCGGGCGAGTGCCGCACCA ATGGTGCGAAAGAAAAGACACACACGGCTCAGAGCCTTGTTCGCACCCTG TCTCAGGTGCACCGAATCGTTCGCGAGACAGGCCTTTTCTTATGATAGCA ATCGACGCTGCTCGACCAGTCCATGAACACCATGCAGCAGTTGCGGCTAT AAGGTCCTGCGCGTTGTGGTGCATCGGTGACATGTCGGTATAGACACTGT TCACGGCCCACAACGGTGGCACTTCCTCCGTAAACTTGAAACCGGCGCCA TCATCTCTCCTTAGGCTTTGCTATTCTCGCCGATCAGTGTCGCTGCCCGT TTCACGCCTGTGTGTTGCCACACGCACCCTGCATCGCATTTTTCGAATTG CCAACTCCTGCGCTTACTCCCTCTCTCGTTACTCGCCGCATCCCCGCAGA AAGGTGCTCGAAAAGTGGTGATCTCCGACTATTCCACGTCCACCGACCAG ACCCTCATGGTACCCATCCAGATGAACATCGAACGCATCCAGCCAGAGTT CGTGCCTCGGGAAACGCTTTATGCCGTGGGGCACGTGTGGGGACACCCTG TAGAAGATCTCCTTGAGCCCTTGACAGTGCCGGCACCCTCGGTGTGCCAG AGCACCGGCAATCGACCGCCGGTCAAGCAATCGAACGATGGAGGAGGCCG GAAGGCAGCGGTGGACGAAAACGTCTCGCGAGGACCAGGGGAAGGCTTTG ATGTCGTGATCATGGCGGACCTTCTGTTCAACCGGTCTCAGCACGCCCAG CTGCTGGATTCCTGTGATCGGTGTCTGGGTCGGTCGAAGGAGGCGACCGC GTGGGTCAGCTTCAGCCACCACGACCCGGAGAAAGCGGAGCTGGACATGA ATTTCTTTGCCGTCGCCAGGCAAAAGGGATTCATTGCAACTAAACCCAGA CGGTGAGCGCCGGTGCCACGCACTGTTAAATTGCCTATTCTTGGAACTAA GCTAGGTTGGTCTGTTGCCAAATATTCAGCAAGCGTTCATGGTGAACTCG AATCTAGACAGCACACACATACGTGTATTTGTCGCTCTCGCCGTATGCAG ACTTCGTAATAGAACTTCTGTACGCCGTGTCGAGTTGGGCGAGACCCACC CCACGTTGGCGTCACCGTTGATGGCGATTTCCCCATAATGCCCCCCGCGC TTTTCGCGGACACACCCACCCCCTCCCCGTACCGACATGTGAAACCCACC CCCCAAAATCTCAGGTTCAGATGCGAGACTTGTTCGAGGAGAACGACGGG ATGGATGACCTACGAGGCGAAGTGCACCTGTGGCACCTGACACGCGGGTC ATTGGGCGGACTTGAACACCCTTGCTGTACACAGGATTCGCCAGTGGCAC CCCAATATACTGCCTAAAGCCTTACCCGTGTTAGCTGCTGGTACAAGGTA GAACG
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Coding sequence (CDS) from alignment at S-dermatodea_contig91:33724..37728-

>mRNA_S-dermatodea_contig91.17176.1 ID=mRNA_S-dermatodea_contig91.17176.1|Name=mRNA_S-dermatodea_contig91.17176.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1824bp|location=Sequence derived from alignment at S-dermatodea_contig91:33724..37728- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGGGGGAATCGTGGAGGGGGAGCGCGAAGATGTCTTCGGATCGTTGTT
CGACGATGGAAATTCCAGATGGGGGGAATCGTGGAGGGGGAGCGCGAAGA
TGTCTTCGGATCGTTGTTCGACGATGGAAATTCCAGCGATGGAGATGACG
CACACGACAACGATCCTGCTCTAGTGGAATTGGTGCATGTCAGGACGAAA
GCTGCAGGCAGAGCTTCGCCGGTGCCGCCGACACTACGACTCTCACTAGT
CAGCTCTCGCCACAGCTTGTGGGGGCATCGCCTGTGGAACGCGGCCCTCC
TTCTTGCGGCGATGGAGATGACGCACACGACAACGATCCTGCTCTAGTGG
AATTGGTGCATGTCAGGACGAAAGCTGCAGGCAGAGCTTCGCCGGTGCCG
CCGACACTACGACTCTCACTAGTCAGCTCTCGCCACAGCTTGTGGGGGCA
TCGCCTGTGGAACGCGGCCCTCCTTCTTGCGGAAATGTTCGAAACTAGCG
ACATTGACGTTGAGGGAAAGACCGTACTCGAGTTGGGCGCTGGAGCGGGA
CTCCCAGGGCTTGTATGCGCTCTGAAATGTTCGAAACTAGCGACATTGAC
GTTGAGGGAAAGACCGTACTCGAGTTGGGCGCTGGAGCGGGACTCCCAGG
GCTTGTATGCGCTCTGAAAGGTGCTCGAAAAGTGGTGATCTCCGACTATT
CCACGTCCACCGACCAGACCCTCATGGTACCCATCCAGATGAACATCGAA
CGCATCCAGCCAGAGTTCGTGCCTCGGGAAACGCTTTATGCCGTGGGGCA
CGTGTGGGGACACCCTGTAGAAGATCTCCTTGAGCCCTTGACAGTGCCGG
CACCCTCGGTGTGCCAGAGCACCGGCAATCGACCGCCGGTCAAGCAATCG
AACGATGGAGGAGGCCGGAAGGCAGCGGTGGACGAAAACGTCTCGCGAGG
ACCAGGGGAAGGCTTTGATGTCGTGATCATGGCGGACCTTCTGTTCAACC
GGTCTCAGCACGCCCAGCTGCTGGATTCCTGTGATCGGTGTCTGGGTCGG
TCGAAGGAGGCGACCGCGTGGGTCAGCTTCAGCCACCACGACCCGGAGAA
AGCGGAGCTGGACATGAATTTCTTTGCCGTCGCCAGGCAAAAGGGATTCA
TTGCAACTAAACCCAGACGAAAGGTGCTCGAAAAGTGGTGATCTCCGACT
ATTCCACGTCCACCGACCAGACCCTCATGGTACCCATCCAGATGAACATC
GAACGCATCCAGCCAGAGTTCGTGCCTCGGGAAACGCTTTATGCCGTGGG
GCACGTGTGGGGACACCCTGTAGAAGATCTCCTTGAGCCCTTGACAGTGC
CGGCACCCTCGGTGTGCCAGAGCACCGGCAATCGACCGCCGGTCAAGCAA
TCGAACGATGGAGGAGGCCGGAAGGCAGCGGTGGACGAAAACGTCTCGCG
AGGACCAGGGGAAGGCTTTGATGTCGTGATCATGGCGGACCTTCTGTTCA
ACCGGTCTCAGCACGCCCAGCTGCTGGATTCCTGTGATCGGTGTCTGGGT
CGGTCGAAGGAGGCGACCGCGTGGGTCAGCTTCAGCCACCACGACCCGGA
GAAAGCGGAGCTGGACATGAATTTCTTTGCCGTCGCCAGGCAAAAGGGAT
TCATTGCAACTAAACCCAGACGGTTCAGATGCGAGACTTGTTCGAGGAGA
ACGACGGGATGGATGACCTACGAGGCGAAGTGCACCTGTGGCACCTGAGT
TCAGATGCGAGACTTGTTCGAGGAGAACGACGGGATGGATGACCTACGAG
GCGAAGTGCACCTGTGGCACCTGA
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