mRNA_S-dermatodea_contig908.17161.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig908.17161.1 vs. uniprot
Match: D8LMR0_ECTSI (MOSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR0_ECTSI) HSP 1 Score: 117 bits (294), Expect = 1.750e-29 Identity = 62/93 (66.67%), Postives = 75/93 (80.65%), Query Frame = 3
Query: 81 LALLGAGVILGSCLLP---GML--RRDRGGSGVECRPDEPIQGKAEAEITSLRVYPVKSCAGHELQQATLGDRGLDMDRLWMVVDGRGRFMSQ 344
L L GA ++LG+C+LP GM R+D G +CRPDEP + A+A+ITSLRVYPVKSCAGHE+QQA+LGDRGL+MDR WM+VDGRGRFMSQ
Sbjct: 15 LILCGALLVLGTCVLPMCAGMRVPRQD----GEKCRPDEPHEIPAKAKITSLRVYPVKSCAGHEVQQASLGDRGLEMDRQWMIVDGRGRFMSQ 103
BLAST of mRNA_S-dermatodea_contig908.17161.1 vs. uniprot
Match: A0A8J8W025_9EURO (MOSC domain-containing protein n=1 Tax=Penicillium sp. RFL-2021a TaxID=2839758 RepID=A0A8J8W025_9EURO) HSP 1 Score: 70.9 bits (172), Expect = 4.940e-12 Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = 3
Query: 42 MIDGDSLLASPLALALLGAGVILGSCLLPGMLRRDRGGSGVECRPDEPIQGKAEAEITSLRVYPVKSCAGHELQQATLGDRGLDMDRLWMVVD 320
M+D +L ++P+ LA +G+IL LLP +L G R P + + +EI SLRVYP+KSC G E+Q TL ++GLD+DR WM+VD
Sbjct: 1 MLDRSTLTSTPVILA---SGIIL---LLPLLLVPQFNGWTKHLRIQLPGRRRQRSEIVSLRVYPIKSCRGFEVQSTTLKEQGLDLDRRWMLVD 87
BLAST of mRNA_S-dermatodea_contig908.17161.1 vs. uniprot
Match: A0A835Z5C1_9STRA (MOSC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5C1_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 6.360e-12 Identity = 33/58 (56.90%), Postives = 38/58 (65.52%), Query Frame = 3
Query: 171 RPDEPIQGKAEAEITSLRVYPVKSCAGHELQQATLGDRGLDMDRLWMVVDGRGRFMSQ 344
+ DEP G AE+TSLRVYP+KSCAGHE+ L GL DR W+VV GRF SQ
Sbjct: 47 KKDEPYYGTEAAEVTSLRVYPIKSCAGHEVDCWELTKTGLKYDRNWVVVGADGRFRSQ 104
BLAST of mRNA_S-dermatodea_contig908.17161.1 vs. uniprot
Match: UPI000495C61F (MOSC N-terminal beta barrel domain-containing protein n=1 Tax=Polaromonas glacialis TaxID=866564 RepID=UPI000495C61F) HSP 1 Score: 68.9 bits (167), Expect = 1.710e-11 Identity = 34/61 (55.74%), Postives = 41/61 (67.21%), Query Frame = 3
Query: 171 RPDEPIQGKAE---AEITSLRVYPVKSCAGHELQQATLGDRGLDMDRLWMVVDGRGRFMSQ 344
+ D QGK A IT L VYPVKSCAG ++QQA + D GL+ DR WMVVDG G F++Q
Sbjct: 4 KADAAAQGKPSDLAAIITGLYVYPVKSCAGVQVQQAIVLDTGLEFDRAWMVVDGNGHFLTQ 64
BLAST of mRNA_S-dermatodea_contig908.17161.1 vs. uniprot
Match: A0A495I1U0_9BURK (MOSC domain-containing protein n=17 Tax=Burkholderiales TaxID=80840 RepID=A0A495I1U0_9BURK) HSP 1 Score: 67.8 bits (164), Expect = 4.120e-11 Identity = 33/57 (57.89%), Postives = 38/57 (66.67%), Query Frame = 3
Query: 174 PDEPIQGKAEAEITSLRVYPVKSCAGHELQQATLGDRGLDMDRLWMVVDGRGRFMSQ 344
PD + G I L VYPVKSCAG E+QQA L D GLD+DR WMVVD G F++Q
Sbjct: 5 PDSDLSGT----IARLFVYPVKSCAGIEVQQALLTDTGLDLDRAWMVVDAEGMFVTQ 57
BLAST of mRNA_S-dermatodea_contig908.17161.1 vs. uniprot
Match: UPI000BBBE52B (MOSC N-terminal beta barrel domain-containing protein n=2 Tax=unclassified Polaromonas TaxID=2638319 RepID=UPI000BBBE52B) HSP 1 Score: 67.4 bits (163), Expect = 6.080e-11 Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 3
Query: 183 PIQGKAEAEITSLRVYPVKSCAGHELQQATLGDRGLDMDRLWMVVDGRGRFMSQ 344
P G A IT L VYPVKSCAG ++Q+A L + GL+ DR WMVVD +G F++Q
Sbjct: 7 PASGDVGAVITGLWVYPVKSCAGVQVQEALLTETGLEFDRAWMVVDAQGAFLTQ 60
BLAST of mRNA_S-dermatodea_contig908.17161.1 vs. uniprot
Match: K0HXD0_9BURK (MOSC domain-containing protein n=2 Tax=unclassified Acidovorax TaxID=2684926 RepID=K0HXD0_9BURK) HSP 1 Score: 67.0 bits (162), Expect = 7.950e-11 Identity = 30/54 (55.56%), Postives = 37/54 (68.52%), Query Frame = 3
Query: 183 PIQGKAEAEITSLRVYPVKSCAGHELQQATLGDRGLDMDRLWMVVDGRGRFMSQ 344
P + I L VYPVKSCAG E+QQA L + GLD+DR WMVVD +G F++Q
Sbjct: 4 PSESDLSGTIARLFVYPVKSCAGIEVQQALLTETGLDLDRAWMVVDAQGMFLTQ 57
BLAST of mRNA_S-dermatodea_contig908.17161.1 vs. uniprot
Match: A0A2T6J9K1_9BURK (MOSC domain-containing protein n=11 Tax=Acidovorax TaxID=12916 RepID=A0A2T6J9K1_9BURK) HSP 1 Score: 66.6 bits (161), Expect = 1.100e-10 Identity = 30/54 (55.56%), Postives = 37/54 (68.52%), Query Frame = 3
Query: 183 PIQGKAEAEITSLRVYPVKSCAGHELQQATLGDRGLDMDRLWMVVDGRGRFMSQ 344
P + I L VYPVKSCAG E+QQA L + GLD+DR WMVVD +G F++Q
Sbjct: 4 PSESDLSGTIARLFVYPVKSCAGIEVQQALLTETGLDLDRAWMVVDAQGLFLTQ 57
BLAST of mRNA_S-dermatodea_contig908.17161.1 vs. uniprot
Match: A0A258P1M6_9BURK (MOSC domain-containing protein n=1 Tax=Polaromonas sp. 35-63-35 TaxID=1970418 RepID=A0A258P1M6_9BURK) HSP 1 Score: 66.6 bits (161), Expect = 1.160e-10 Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 3
Query: 180 EPIQGKAEAEITSLRVYPVKSCAGHELQQATLGDRGLDMDRLWMVVDGRGRFMSQ 344
+P G A IT L VYPVKSCAG ++Q+A L + GL+ DR WMVVD G F++Q
Sbjct: 6 DPAPGDVGAVITGLWVYPVKSCAGVQVQEAILTETGLEFDRAWMVVDEHGAFLTQ 60
BLAST of mRNA_S-dermatodea_contig908.17161.1 vs. uniprot
Match: A0A519MJ27_9BURK (MOSC domain-containing protein (Fragment) n=1 Tax=Acidovorax sp. TaxID=1872122 RepID=A0A519MJ27_9BURK) HSP 1 Score: 65.5 bits (158), Expect = 1.380e-10 Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 3
Query: 174 PDEPIQGKAEAEITSLRVYPVKSCAGHELQQATLGDRGLDMDRLWMVVDGRGRFMSQ 344
PD + G I L VYPVKSCAG E+Q+A L + GLD+DR WMVVD G F++Q
Sbjct: 5 PDSDLSGT----IARLFVYPVKSCAGIEVQEALLTETGLDLDRAWMVVDAHGAFLTQ 57 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig908.17161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig908.17161.1 >prot_S-dermatodea_contig908.17161.1 ID=prot_S-dermatodea_contig908.17161.1|Name=mRNA_S-dermatodea_contig908.17161.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=108bp MMDRLGTMIDGDSLLASPLALALLGAGVILGSCLLPGMLRRDRGGSGVECback to top mRNA from alignment at S-dermatodea_contig908:838..7300- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig908.17161.1 ID=mRNA_S-dermatodea_contig908.17161.1|Name=mRNA_S-dermatodea_contig908.17161.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6463bp|location=Sequence derived from alignment at S-dermatodea_contig908:838..7300- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig908:838..7300- >mRNA_S-dermatodea_contig908.17161.1 ID=mRNA_S-dermatodea_contig908.17161.1|Name=mRNA_S-dermatodea_contig908.17161.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=648bp|location=Sequence derived from alignment at S-dermatodea_contig908:838..7300- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |