mRNA_S-dermatodea_contig9069.17152.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9069.17152.1
Unique NamemRNA_S-dermatodea_contig9069.17152.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig9069.17152.1 vs. uniprot
Match: A0A6H5L593_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L593_9PHAE)

HSP 1 Score: 533 bits (1374), Expect = 1.300e-172
Identity = 271/368 (73.64%), Postives = 306/368 (83.15%), Query Frame = 1 
Query:    1 RLNVTRPGYTKRLKTQRGNVSLLFLGNDSPAPGTLIKLDHGKKKVYNVLRRLESPTPSEVRRTCKRYLASGHSKRPTHQVDAFVIKSSELDFKPVKDSAGKIKTGSVGPWACERHECTGDMQLQTFRKGPGDNLLTGLSMKDYFDARQTLEEKILRASD--GDAEG-ASTAAPGPSAFFNFGERSRENQKAKILARINTPHKRFDKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTFDNCKIFKRGELEPELFLVNPDYSSSRRMRKGVYEGVMPGNVVIRGSGAGAAPPSGTXXXXXXXXXXXXXTPSNRGVGFRVWQPSFGPGSSQTPF 1095
            R++ T  GYTKRLKTQRG VSLLFLGNDSPAPGTLIKLDHGK+K+YNVLRRLESPTPSEVRRTC+RYL+ G SKRP  QVDA+VIKSS L+FKPVKD +GK+KTG+VGPWACE +ECTGDMQLQ FRKG GDNLL+GLSMK+YFD RQTLEEK++RA    G+A G A+T + GP + FNFGERS ++QKAK+LA++NTPHKRF+KKIKASMWMSQ+FPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGV+AAVTFDNCKIFK GELEPELFLV PDYSSSRRM+KGV+EGVMPG+++IR S                           +   FRVWQPS GPG  +TP 
Sbjct: 1148 RMDSTITGYTKRLKTQRGKVSLLFLGNDSPAPGTLIKLDHGKRKIYNVLRRLESPTPSEVRRTCRRYLSPGQSKRPASQVDAYVIKSSALNFKPVKDYSGKLKTGTVGPWACEMYECTGDMQLQAFRKGAGDNLLSGLSMKNYFDVRQTLEEKVMRAGGDGGEASGVAATPSSGPGSLFNFGERSAQSQKAKMLAKLNTPHKRFEKKIKASMWMSQEFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVYAAVTFDNCKIFKPGELEPELFLVKPDYSSSRRMQKGVFEGVMPGSMIIRPSAE---------------------EQQQQQPRFRVWQPSDGPGFPETPI 1494
[Close]
BLAST of mRNA_S-dermatodea_contig9069.17152.1 vs. uniprot
Match: D8LIX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIX3_ECTSI)

HSP 1 Score: 505 bits (1300), Expect = 7.590e-166
Identity = 247/304 (81.25%), Postives = 275/304 (90.46%), Query Frame = 1 
Query:    1 RLNVTRPGYTKRLKTQRGNVSLLFLGNDSPAPGTLIKLDHGKKKVYNVLRRLESPTPSEVRRTCKRYLASGHSKRPTHQVDAFVIKSSELDFKPVKDSAGKIKTGSVGPWACERHECTGDMQLQTFRKGPGDNLLTGLSMKDYFDARQTLEEKILRASDGDAEG---ASTAAPGPSAFFNFGERSRENQKAKILARINTPHKRFDKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTFDNCKIFKRGELEPELFLVNPDYSSSRRMRK 903
            R++ T  GYTKRLKTQRG VSLLFLGNDSPAPGTLIKLDHGK+K+YNVLRRLESPTPSEVRRTC+RYL+ G SKRP  QVDA+VIKSS L+FKPVKD +GK+KTG+VGPWACE +ECTGDMQLQ FRKG GDNLL+GLSMK+YFD RQTLEEK++RA     EG   A+T + GP + FNFGERS ++QKAK+LA++NTPHKRF+KKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGV+AAVTFDNCK+FK GELEPELFLV PDYSSSRRM+K
Sbjct:  902 RMDSTITGYTKRLKTQRGKVSLLFLGNDSPAPGTLIKLDHGKRKIYNVLRRLESPTPSEVRRTCRRYLSPGQSKRPASQVDAYVIKSSALNFKPVKDYSGKLKTGTVGPWACEMYECTGDMQLQAFRKGAGDNLLSGLSMKNYFDVRQTLEEKVMRAGGNGGEGSGVAATPSSGPGSLFNFGERSAQSQKAKMLAKLNTPHKRFEKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVYAAVTFDNCKVFKPGELEPELFLVKPDYSSSRRMQK 1205
[Close]
BLAST of mRNA_S-dermatodea_contig9069.17152.1 vs. uniprot
Match: A0A835YZ10_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ10_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.680e-32
Identity = 99/338 (29.29%), Postives = 153/338 (45.27%), Query Frame = 1 
Query:    1 RLNVTRPGYTKRLKTQRGNVSLLFLGNDSPAPGTLIKLDHGKKK------------------------------VYNVLRRLESPTPSEVRRTCKRYLASGHSKRPTHQVD------AF---VIKSSELDFKPVKDSAGKIKTGS----VGPWACERHECTGDMQLQTFRK-GPGDNLLTGLSMKDYFDARQTLEEKILRASDGDAEGASTAAPGPSAFFNFGERSRENQKAKILARINTPHKRFDKKIKASMWMSQDFPLTLEHVTPMLE------------------VLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTFDNCKI 828
            R++ T  GY++ L+  RG+VSLL  G D+ APG L+K+DHGK+K                              +YNVLRRLE PT  E++  C++ L   H  +     D      AF      S     +P   S+GK+  G     +G W C +++  G++ + T+ K G     L  +   DYF A           +  DA G                                 HK   ++++A MWM+  FPL+L+H+ P+L+                  VL+++D+ + ++ ++L   G+REAGFP ++SLPLYLGVFA V+FD C++
Sbjct:  190 RVDSTISGYSRALRVVRGDVSLLLQGADADAPGALLKVDHGKRKXXXXXXXXXXXXXXXXXXXXXPLGCPALTVIYNVLRRLEHPTVGELKHACRKLLRDSHHGKHVKTYDFAARAVAFGPAPAPSPHGAGRPPPGSSGKMVQGGTEAVMGGWPCTKYQGVGEVSVGTYTKSGAQGGALRRVREDDYFAAAXXXXXXXXXTAAADAAGXXXXXX----XXXXXXXXXXXXXXXXXXXXGVRHKATVRELRADMWMACGFPLSLDHILPVLQASAAAAATNILFVVVCEPVLAVEDRNMQQVLDLLRADGVREAGFPLRLSLPLYLGVFAEVSFDCCEM 523
[Close]
BLAST of mRNA_S-dermatodea_contig9069.17152.1 vs. uniprot
Match: K7N264_SOYBN (Uncharacterized protein n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=K7N264_SOYBN)

HSP 1 Score: 84.7 bits (208), Expect = 3.830e-14
Identity = 83/305 (27.21%), Postives = 139/305 (45.57%), Query Frame = 1 
Query:    1 RLNVTRPGYTKRLKTQRGNVSLLFLGN-----DSPAPGTLIKLDHGKKKVYNVLRRLESPTPSEVRRTCKRYLASGHSKRPTHQVDAFVIKSSELDFKPVKDSAGKIKTGSVGPWACERHECTGDMQLQTF----RKGPG---------------------DNLLTGLSMKDYFDARQTLEEKILRASDGDAEGASTAAP---GPSAFFNFGERSRENQKAKILARINTP-HKRFDKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTF 813
            R ++T  G+   LK +R N S+LFLG+     +S  PG+L K+ H +KKVY V   L++PT  +V+ T  +       K  +  V    +  S+    P      K +   VGPW  + +    DMQ   F    R+ PG                     +++LT    K +        E  + +SD +    + A     G S      +  + N        +N     +F + +  ++W+SQ+FPL ++ + PML++L+ + K + +L+E+LTTK  +E+ FP KV++P+   V   VTF
Sbjct:  186 RADMTLAGFDG-LKIKRSNQSVLFLGDGTSDDESKFPGSLFKVLHKEKKVYVVSPSLDAPTDRDVKDTLAK-------KSRSESVRRVGLDVSQALLVPQLTWRRKERKEMVGPWKAKVY----DMQNVVFSVKSRRIPGAPPPEAKPAPKKTKKKDNGKIEDILTDEERKQF--------EAAMNSSDDNGHSHNRAKKEKKGRSGGHRDHKERKTNSAQPAEHFVNQKGESQFKRGMMPALWLSQNFPLKIDELLPMLDILAEKLKAVRRLRELLTTKLPKES-FPVKVAIPVVSTVRVLVTF 469
[Close]
BLAST of mRNA_S-dermatodea_contig9069.17152.1 vs. uniprot
Match: A0A0B2QP54_GLYSO (Ankyrin repeat domain-containing protein 13C-B n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=A0A0B2QP54_GLYSO)

HSP 1 Score: 81.3 bits (199), Expect = 5.330e-13
Identity = 81/296 (27.36%), Postives = 135/296 (45.61%), Query Frame = 1 
Query:    1 RLNVTRPGYTKRLKTQRGNVSLLFLGN-----DSPAPGTLIKLDHGKKKVYNVLRRLESPTPSEVRRTCKRYLASGHSKRPTHQVDAFVIKSSELDFKPVKDSAGKIKTGSVGPWACERHECTGDMQLQTFRKGPGD------------NLLTGLSMKDYF--DARQTLEEKILRASDGDAEGASTAAPGPSAFFNFGERSRENQKAKILAR---INTPHK---RFDKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTF 813
            R ++T  G+   LK +R N S+LFLG+     +   PG+L K+ H +K+V     R  +PT  +V+ T  R       K  +  V   +  S  L   P      K +   VGPW  + ++    +     R+ PG             N+     ++D    + R+ LE  +  + D      S  A       + G R     K    A+   I+   K   +F + +  S+W+SQ+FPL ++ + PML++L+ + K + +L+E+LTTK  +E+ FP KV++P+   V   VTF
Sbjct:  186 RADMTLAGFDG-LKIKRSNQSILFLGDGTSDDERKFPGSLFKVLHKEKEVIVASPRKVAPTDRQVKNTLAR-------KSRSESVRVGIDVSQAL-LVPQLTWRRKERKEMVGPWKAKVYDMQNVVLSVKSRRIPGAPPPEAKPAPKQANMKDNEKIEDILTDEERKQLEAAMNSSDDNGHTHKSKHAKKEKKGRSGGHRDHNKDKNTTSAQSAEISVNQKGESQFKRGMMPSLWLSQNFPLKIDELLPMLDILAEKLKAVRRLRELLTTKLPKES-FPIKVAIPVVSTVRVLVTF 471
[Close]
BLAST of mRNA_S-dermatodea_contig9069.17152.1 vs. uniprot
Match: A0A151S7Q3_CAJCA (Ankyrin repeat domain-containing protein 13B n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S7Q3_CAJCA)

HSP 1 Score: 78.2 bits (191), Expect = 5.220e-12
Identity = 72/267 (26.97%), Postives = 121/267 (45.32%), Query Frame = 1 
Query:   37 LKTQRGNVSLLFLGN-----DSPAPGTLIKLDHGKKKVYNVLRRLESPTPSEVRRTCKRYLASGHSKRPTHQVDAFVIKSSELDFKPVKDSAGKIKTGSVGPWACERHECTGDMQLQTFRKGPGDNLLTGLSMKDYFDARQTLEEKILRASDG-DAEGASTAAPGPSAFFNFGERSRENQKAKILARINTPHKRFDKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTFDN 819
            LK +R N S+LFLG+     +    G+L KL H +K+V  V   + +PT  +VR T  +      SK  + +V    I  SE    P      K +   VGPW    +    DMQ          N++  +  K    A     + I + +   D+E                 + +    +   +       +F + +  ++W+SQ+FPL +E + PML++L+ + K + +L+E+LTTK  +E+ FP KV++P+   V   VTF+ 
Sbjct:  197 LKIKRSNQSILFLGDGTSDDERKVRGSLFKLSHKEKEVVVVSPSIVAPTDRQVRNTLLK-----KSKSESVRV---AIDVSEAHLVPQLTWRRKERKEMVGPWKARVY----DMQ----------NVVLNVKSKRVPGAPPPEAKPIPKENKKKDSEKLDEILTDXXXXXXXXXKGKNTNASSENSSGPKEESQFKRGMMPALWLSQNFPLKIEELLPMLDILAEKLKAVRRLRELLTTKLPKES-FPVKVAIPVVSTVRVLVTFNK 440
[Close]
BLAST of mRNA_S-dermatodea_contig9069.17152.1 vs. uniprot
Match: A0A4D6N0I0_VIGUN (Uncharacterized protein n=2 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6N0I0_VIGUN)

HSP 1 Score: 76.3 bits (186), Expect = 2.150e-11
Identity = 83/325 (25.54%), Postives = 137/325 (42.15%), Query Frame = 1 
Query:    1 RLNVTRPGYTKRLKTQRGNVSLLFLGN-----DSPAPGTLIKLDHGKKKVYNVLRRLESPTPSEVRRTCKRYLASGHSKRPTHQVDAFVIKSSELDFKPVKDSAGKIKTGSVGPWACERHECTGDMQLQTFRKGPG--------DNLLTGLSMKDYF--DARQTLEEKILRASD-GDAEGASTAAPGPSAFF-------------------------NFGERSRENQKAKILARINTPHKRFDKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTFDNCKIFKRGELEP 852
            R ++T  G+   LK +R N S+LFLG+     D   PG+L K+ H +K+V  +   + SPT  EV++T        + K  T  V    I  SE    P      K +   VGPW  + ++    +     ++ PG             G  + D    D ++ LE  I    + G  E ++                                   NF  ++ ENQ  + +                ++W+SQ+FPLT++ + PML++L+ + K + +L+E+LTTK  +E  FP +V +P+ L +   VTF   +     EL+P
Sbjct:  186 RADMTLAGFDG-LKIKRSNQSILFLGDGAKDDDRKFPGSLFKVSHKEKEVLVISPTIASPTEREVKKTL-------NQKYRTDSVRVG-IDVSEAVLVPQVTWRKKERKEMVGPWKAKVYDMQNVVLSVKSKRIPGAPPPEARQXXXXEGEKIDDILTDDEKKQLEAAINSTDENGPCEKSNRVKKEXXXXXXXXXXXXXXXXXXXXXXXTTKANSENFTSKNGENQYTRGMI--------------PALWLSQNFPLTIDELLPMLDILAERIKAVRRLRELLTTKLPKET-FPVRVVIPVVLTMRVLVTFTKFE-----ELQP 481
[Close]
BLAST of mRNA_S-dermatodea_contig9069.17152.1 vs. uniprot
Match: A0A8B8M724_ABRPR (ankyrin repeat domain-containing protein 13B-like n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8M724_ABRPR)

HSP 1 Score: 76.3 bits (186), Expect = 2.320e-11
Identity = 78/295 (26.44%), Postives = 126/295 (42.71%), Query Frame = 1 
Query:    1 RLNVTRPGYTKRLKTQRGNVSLLFLGN----DSPAPGTLIKLDHGKKKVYNVLRRLES--PTPSEVRRTCKRYLASGHSKRPTHQVDAFVIKSSELDFKPVKDSAGKIKTGSVGPWACERHECTGDMQLQTFRKGPGDNLLTGLSMKDYFDARQTLEEKI-----------LRASDGDAEGASTAAPGPSAFFNFGERSRENQKAKILARINTPHK-------RFDKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTF 813
            R ++T  G+   +K +R + SL FLG+        PG+L  + H KK+V  V    E   PT  EVR            K+   QV    +  S+    P     GK K  SVG W  + +E    +     +  PG       S ++     +  E+ +           + ASD ++    +         + G R + + K K     N+  +        + K +   +W+S DFPL +E + PML++L+ + K I +L+E+LTT   +E  FP KV++P+   V   VTF
Sbjct:  186 RADMTLAGFDG-MKIKRSDQSLFFLGDGLEDQKKVPGSLCMVSHKKKEVVVVSAPPEDSKPTDREVRLLL--------DKKSRSQVCKVGLDLSQALLAPQMTWRGKEKKESVGTWKAKVYEMQNVVLTVKSKALPGAPPDPKSSPEESTKENEKFEDTLTDDDRKQLEVAMNASDENSHTHKSNVKKEKKGRSSGHREKGHHKGKNNNSANSRSQVNASDDTEYKKGMMPVLWLSHDFPLKIEELLPMLDILAEKVKAIKRLRELLTTTLPKET-FPVKVAIPVVSTVRVLVTF 470
[Close]
BLAST of mRNA_S-dermatodea_contig9069.17152.1 vs. uniprot
Match: A0A7S4MEC8_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MEC8_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 1.580e-10
Identity = 77/307 (25.08%), Postives = 128/307 (41.69%), Query Frame = 1 
Query:    1 RLNVTRPGYTKRLKTQRGNVSLLF-------LGNDSPAPGTLIKLDHGKKKVYNVLRRLESPTPSEVRRTCKRYLASGHSKRPT-HQVDAFVIKSS----ELDFKPVKDSAGKIKTGSVGPWA-CERHECTGDMQLQTFRKGPGDNLLTGLSMKDYFDARQTLEEKILRASDGDAEGASTAAPGPSAFFNFGERSRENQKAKILARINTPHKRFDKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTFDNCKIFKR-GELEPELFLVNPDY 879
            R++ T  G+ + LK  RGN+S +F       LG+D      ++ ++H KKKV   L             + KRY      K    H +   +++       + F   K+  G  KT SVG W+    ++ +G ++  T R   G +               T EEK L   +               +F+      EN K   L           K  KA +W+++DFP+T+E + PM  +LS   K   KLK+ L+   + E GFP K+ +P++  ++   TF    +F     ++  +F + P+Y
Sbjct:  200 RVDTTLIGF-ENLKWVRGNISFIFSETLRHPLGSDDSISSHVVIINHEKKKVEFALD------------SFKRYSLGNSEKHDLRHMIQNPMVRMQLMYDNITFDRCKNWFGYNKTESVGEWSNASVYDVSGIVRKTTKRSSSGRSSTQPA----------TEEEKNLNCDE---------------YFSR-PIDEENPKGTGLLHDYEKRSCSSKLHKAKVWITEDFPVTIEDLLPMFAILSPNGKHFEKLKDFLSVP-LPEEGFPVKIEVPVFPTIYGTATFG---VFDHDATIDESVFDIPPEY 463
[Close]
BLAST of mRNA_S-dermatodea_contig9069.17152.1 vs. uniprot
Match: A0A445AHB3_ARAHY (Uncharacterized protein n=1 Tax=Arachis hypogaea TaxID=3818 RepID=A0A445AHB3_ARAHY)

HSP 1 Score: 73.6 bits (179), Expect = 2.450e-10
Identity = 81/302 (26.82%), Postives = 128/302 (42.38%), Query Frame = 1 
Query:    1 RLNVTRPGYTKRLKTQRGNVSLLFLGNDSP----APGTLIKLDHGKKK--VYNVLRRLESPTPSEVRRTCKRYLASGHSKRPTHQVDAFVIKSSELDFKPVKDSAGKIKTGSVGPWACERHECTGDMQLQTFRKGPG---------------------DNLLTGLSMKDYFDARQTLEEKILRASDGDAEGASTAA----PGPSAFFNFGERSRENQKAKILARINTPHKRFDKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMREAGFPAKVSLPLYLGVFAAVTF 813
            R ++T  G+   LK +R + S+LFLG+ S      PG+L  L H KK+  V + L     P+  E+R+   R       K   ++V +  I  S+    P      K +  SVG W  + ++    +     +  PG                     D +LT    K    A  + EE       G  E    +      G     + G  S  N         N   + F K +  S+W+SQ++PL +E + P+L++LS + K + +++EVLTTK  ++  FP KVS+P+   V   VTF
Sbjct:  825 RADMTLAGFDG-LKIKRSDQSILFLGDGSEDGKRVPGSLCVLSHKKKELIVTSKLPGPSKPSDREIRQVLAR-------KYRDNKVVSVAIDVSQAVLVPQLTWRRKERKESVGSWKAKVYDMQNVILSVKSKSIPGAPPDIELASRQCNKEQSNKELDEVLTPEERKQLEVALNSTEENNGHKGHGKKEKKGRSGGHKEKGNKTNASSGGSSVGNGNG------NGSDEVFKKGMNPSLWLSQNYPLKIEELFPLLDILSEKVKAVRRVREVLTTKLPKDT-FPVKVSIPVISTVRVLVTF 1111
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9069.17152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L593_9PHAE1.300e-17273.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIX3_ECTSI7.590e-16681.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YZ10_9STRA2.680e-3229.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K7N264_SOYBN3.830e-1427.21Uncharacterized protein n=2 Tax=Glycine subgen. So... [more]
A0A0B2QP54_GLYSO5.330e-1327.36Ankyrin repeat domain-containing protein 13C-B n=2... [more]
A0A151S7Q3_CAJCA5.220e-1226.97Ankyrin repeat domain-containing protein 13B n=2 T... [more]
A0A4D6N0I0_VIGUN2.150e-1125.54Uncharacterized protein n=2 Tax=Vigna unguiculata ... [more]
A0A8B8M724_ABRPR2.320e-1126.44ankyrin repeat domain-containing protein 13B-like ... [more]
A0A7S4MEC8_9EUKA1.580e-1025.08Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A445AHB3_ARAHY2.450e-1026.82Uncharacterized protein n=1 Tax=Arachis hypogaea T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9069contigS-dermatodea_contig9069:361..7724 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score504.6
Seed ortholog evalue4.1e-140
Seed eggNOG ortholog2880.D8LIX3
KEGG koko:K21437
GOsGO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006621,GO:0008104,GO:0008150,GO:0009889,GO:0009987,GO:0010556,GO:0010869,GO:0010941,GO:0012505,GO:0019222,GO:0031323,GO:0032507,GO:0033036,GO:0033365,GO:0034613,GO:0035437,GO:0042981,GO:0043067,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045185,GO:0048471,GO:0050789,GO:0050794,GO:0051179,GO:0051235,GO:0051641,GO:0051651,GO:0060255,GO:0065007,GO:0065008,GO:0070727,GO:0070972,GO:0072595,GO:2000209
EggNOG free text desc.protein retention in ER lumen
EggNOG OGsKOG0522@1,KOG0522@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAnkyrin repeat domain-containing protein 13
Ec32 orthologEc-20_001920.1
Exons7
Model size1169
Cds size1167
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925384.05384-CDS-S-dermatodea_contig9069:360..4921622925384.05384-CDS-S-dermatodea_contig9069:360..492Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9069 361..492 +
1694079896.895774-CDS-S-dermatodea_contig9069:360..4921694079896.895774-CDS-S-dermatodea_contig9069:360..492Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9069 361..492 +
1622925384.0668979-CDS-S-dermatodea_contig9069:1992..20971622925384.0668979-CDS-S-dermatodea_contig9069:1992..2097Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9069 1993..2097 +
1694079896.909473-CDS-S-dermatodea_contig9069:1992..20971694079896.909473-CDS-S-dermatodea_contig9069:1992..2097Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9069 1993..2097 +
1622925384.0784621-CDS-S-dermatodea_contig9069:2601..27871622925384.0784621-CDS-S-dermatodea_contig9069:2601..2787Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9069 2602..2787 +
1694079896.9217308-CDS-S-dermatodea_contig9069:2601..27871694079896.9217308-CDS-S-dermatodea_contig9069:2601..2787Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9069 2602..2787 +
1622925384.0876117-CDS-S-dermatodea_contig9069:3865..40541622925384.0876117-CDS-S-dermatodea_contig9069:3865..4054Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9069 3866..4054 +
1694079896.9311438-CDS-S-dermatodea_contig9069:3865..40541694079896.9311438-CDS-S-dermatodea_contig9069:3865..4054Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9069 3866..4054 +
1622925384.1024823-CDS-S-dermatodea_contig9069:5267..53511622925384.1024823-CDS-S-dermatodea_contig9069:5267..5351Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9069 5268..5351 +
1694079896.9399776-CDS-S-dermatodea_contig9069:5267..53511694079896.9399776-CDS-S-dermatodea_contig9069:5267..5351Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9069 5268..5351 +
1622925384.1137753-CDS-S-dermatodea_contig9069:6634..68411622925384.1137753-CDS-S-dermatodea_contig9069:6634..6841Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9069 6635..6841 +
1694079896.9488952-CDS-S-dermatodea_contig9069:6634..68411694079896.9488952-CDS-S-dermatodea_contig9069:6634..6841Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9069 6635..6841 +
1622925384.1233351-CDS-S-dermatodea_contig9069:7458..77221622925384.1233351-CDS-S-dermatodea_contig9069:7458..7722Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9069 7459..7722 +
1694079896.9580197-CDS-S-dermatodea_contig9069:7458..77221694079896.9580197-CDS-S-dermatodea_contig9069:7458..7722Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9069 7459..7722 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9069.17152.1prot_S-dermatodea_contig9069.17152.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9069 361..7722 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9069.17152.1

>prot_S-dermatodea_contig9069.17152.1 ID=prot_S-dermatodea_contig9069.17152.1|Name=mRNA_S-dermatodea_contig9069.17152.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=389bp
RLNVTRPGYTKRLKTQRGNVSLLFLGNDSPAPGTLIKLDHGKKKVYNVLR
RLESPTPSEVRRTCKRYLASGHSKRPTHQVDAFVIKSSELDFKPVKDSAG
KIKTGSVGPWACERHECTGDMQLQTFRKGPGDNLLTGLSMKDYFDARQTL
EEKILRASDGDAEGASTAAPGPSAFFNFGERSRENQKAKILARINTPHKR
FDKKIKASMWMSQDFPLTLEHVTPMLEVLSMQDKVIHKLKEVLTTKGMRE
AGFPAKVSLPLYLGVFAAVTFDNCKIFKRGELEPELFLVNPDYSSSRRMR
KGVYEGVMPGNVVIRGSGAGAAPPSGTPPTAKPATTTTSTTPSNRGVGFR
VWQPSFGPGSSQTPFSDTARAAKTRSPEDVGGPTSRRVT
back to top

mRNA from alignment at S-dermatodea_contig9069:361..7724+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9069.17152.1 ID=mRNA_S-dermatodea_contig9069.17152.1|Name=mRNA_S-dermatodea_contig9069.17152.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7364bp|location=Sequence derived from alignment at S-dermatodea_contig9069:361..7724+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CGCCTTAACGTTACCCGTCCAGGTTACACCAAGCGTCTTAAAACCCAGCG
AGGAAACGTGTCGCTGCTGTTTCTGGGGAACGACAGCCCGGCTCCGGGAA
CTCTGATCAAGCTCGACCACGGAAAGAAGAAGGTTGGTCGCTTCACCTGC
CGTGTGTCATTGGATTATCCGTTGTCTTTTCCGGAGGTAGACAGTAATCA
GGACTAAATCTCAGGACCATTAACACCCAACTACTTTATTCCGACCATGA
AAATACCCAAACAACAACAAAACTCTCATGAAGAAAAACATGACGATGGT
CTGGCCTCACAACACATCGACGATGAAATCTCGAAATTCCAGCCTGTTTT
GTTTTTTCTAACTTGAGGCTTGCGGCTAATTTGGACCTGTTAACTATGGT
CCTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTTTGGGTGTGGCTTGATTTGTGTACGTGTGTGTT
TCCTTTCGTGTTGGGGTGTTTCTTGCTTCGTGGGTGTTTTTATAAGTGTT
TTAATGGAATGAGTGTGTTTTAAAGTGTGTGTTTTGAGCGCTTATAGTTG
TGGGTTTCAATGTTGCGCGTGTGCTTTTCGTTAGGACGGGTGGGAGGGCG
AAAAAGCTGGCCTTGCCTCGTTCGCCCGTAAGCTCCTCTTCCCACGAAGG
ACTATAATAGGCTCTCAGGAGACCTTATCCTTATCCAGTGTGTCTGTTCA
ATTTGTGTGGAAACCCTCGAATTGCCCACGACCTCCGTTTTTCGTTTATT
GCTGAAGTGTTGGCGTGGATTTTCCCGTGTCCGTAAAGTTGGGGGTGGAA
TGAGGGCTCCTGTAGCCGTCAGCGTCCTCACCCAGAAACCATTGCTAATT
TATTGGGTGTGCTTTTTATTGGGCATTTGTGTGCGCTTCCTTTCGTGTTG
AGCGTTTGTTGCTTCATGTGTGCTTTCATGTGTATGTGCTTTTTGCAAAG
CGTGTTGTGGGTTTCAACGTTTGCGTGAGCTCCACGACGGTATGTGTGTT
TCATACAATAGTCCCCGTGTTTTTGTTTGTTTGTTTGTGTGTTTGTTGTT
TTCTGTGTTTCATCGTCGTTATTGTGTGTTTTGATGTCTCTGGTGTGTGT
GCTCGTTTCTCCCAGAGCATCCGTGCTTGCATCACAGTACAGCTGCGTGC
CGTTGTACTCCGCACTCGGAAGAAAGGGCAATGACTCACCGAAGTCGAAG
ATGTAGGGGGAAACACTCACCACCTGTTACCGGGGTACACACGCGAGGCC
GCAGAGGCCTTTGCGCCCTCGTGTTGTCTGTCTGTCTGTCTTTGTCTGTC
GCCGGCGCCCATCGCGCGCGCAAAATAAATACATGAATTATTGCAGAGGT
ACAAGGTAATCAGGGTCAAATGTGCCAAAACAGCAGTACACCCGACATAG
TATGCCAGAACTCAACAAGGTTTGCGAAATCTTCTGTATTCTTGCGGCCT
GAAATGTCTCTTCAAAAACCAAAAATTGATGCAGGGAAGTCGGTCCAACG
CTTAAAAGCAAGACTTGGATAAGCTTATTGAGCAGAAATTCGGTCTGAAT
ATTACTCTGTGTTCCTTCGCAATGTAATGCAGGTCTACAACGTGCTGCGA
CGTCTGGAGAGCCCCACCCCGTCGGAGGTGCGGAGAACATGCAAGCGCTA
CCTCGCCTCGGGACACTCCAAGCGCCCGACCCACCAGGTGCGGTGGGTGC
GGAAGCGCTTATATTTGTATATCGTAGCTCTACACCCCAACCGCACTGTA
AACTATGCGTGTAAGGTCCACGACATGCTATTAAGTGTGTTGTTCGTACA
TACCGAGAGGCGTGGTCTTTGGCGTGTGGCTGTAATACTATTATAATACT
GTCATACGCAAAAAAAGGTGCACTGGCTGGACCGTAGAGTTGGGGTACCG
TTGCAAGCGAAGTGCGCGGACGCCTTGTGTGATGGAACTCCCCTAAATAA
TTTAAAAGTAATATGTTATTTCAAAAACATGAGAGCGAGCATTTGGGGTC
CAACATTTTTATGAAGGTAAGATGGTCCAAGCTGCACCCATGGAAGCTTA
CGTTACGTAAGATGCCATGGTTTTTTATGTCATGTATCATAAAATGCTAT
AGGATCATGGTACAAGTGTCTTTGTCCTGAGCGATATCCTGGTAGTGTAA
CTTTGATGGAACCCCCCCCCCCCACGTTTTTTCGCCTCCAGGTGGACGCC
TTCGTGATAAAGTCGAGCGAGCTGGACTTCAAGCCCGTCAAGGACAGCGC
GGGGAAGATCAAGACCGGCTCGGTGGGCCCTTGGGCCTGCGAGAGGCACG
AGTGCACGGGGGACATGCAGCTACAGACCTTCCGCAAAGGTCCCGGAGAC
AACCTCCTCACGGGGCTTTCCATGAAGGTGCGGCACGGCGCGGCACGGCA
CGGCGCAGCGCGGCTGGAACTGTCCTGTTTGCGGTTTGTCGATTGTTGTT
GTTATTTGTTGTTGTTGGTCTGGCAGTATCTTATCTCAGGATCTGTCTAC
AGTAGTAGCCGTGGCTACCAGATCGATGCACCGCGTAAAAAAACAGATGT
AACTGTTATAAACGCTCGCTCTCATTTATGCGCGGAATCAAAAACCCCGA
CCCCGTCCTTTTTGGCGGCGATGCCAATAAAAGCTGAGCTCACGAGCCCT
CTGTTTAGGTGTACCTGGTATGGTATACCAGGTACCGTTTAGCCGGAAAG
TGCTTGACACGAGGAAGGGCGCTCGAGGGGGGGTTGACGACAAGTGCTTG
TCGTCGCAGTATATATAGTACAGCGCCCCTTGGCACAGCGGGGCGACTAT
TTTCCCCGCCGACTGCGATACTTGTATCCACCTTTAAGTCGTCATAGTCA
GATGACAGCCCGCTGCGAAGAAATCCCATGGCGCGGAATCAGCGCGCCGA
GCGGGGGAGGAGGGTACTTTTGTTGAACGAATATCGTATCCGGATGGACA
TAGACCAAAGACCACGCGTCCCGACAATGCCGGGACGGAGCGATATGCCG
AGTTTCGCCGGACTAGTTGCGTTTCTCAAGGATGATACGAGCTGCTAGCC
GTTCTCCTTGCGTTTGCGACGCCAACCGTGAATTGATTGGACCAATCGGG
CAACCAAATGTTGCAAATGCAGTAGGCGTGACTACACTCCAAGTACCGCA
AAGGACTTTGATCTCCGGGGGGGCTTGATAAACCTGTGGACTGGCTAGCC
GAAAAGCTGGTAGCTTACGAAAAAGTACAAACGCGGCACCCCCCTGCGCC
CTTGTTTCGTTATTTCTTGCTATCAGACAATTGGCAGATGCCAAACGTTG
TGCGTGTGTTTCTGGGTGACACGCAATGGGAGGAAAACCCTCACACAATG
CGACGTGAAACCCCCCCCACCACCACCCACCACCCCACCCCCATACCAAC
CAACCAATCTGATTTGTGCGCTTGGCGCGAATCGATGTGTTTGATTTCGG
CCCAGGATTACTTCGACGCTCGGCAGACCTTGGAGGAGAAGATACTGCGG
GCGTCGGATGGCGATGCGGAGGGCGCTTCCACGGCCGCTCCCGGCCCGTC
AGCTTTCTTCAACTTCGGAGAGCGGTCGCGGGAGAACCAGAAGGCGAAGA
TCCTCGCCAGGATCAACACCCCTCACAAGCGCTTCGATAAGAAGGTGTGT
GCGCGTGTGTGCGTGCTTGCGTGCTGTGTGGTAAAGCGCGTGCTTTTTTT
ACGGTTCTAGGCAGAGGCCACCGTGACCGTTGTTTTCTGTCAACGTCGCT
TCGTTTTTTGTTTTCCCCCCCGGTTGCTCATCGCCCCTTCGGATGTCATC
TCGAGGGCGTTTGGGGTTCTCGCGTCCTGCTGCATGCAAAATATTCGAAT
GTGTGCAATTTGTAATTTGCGAATTTTGTGTTGTATTCGACGGCGCTATC
GTATATATGCTGCTACTCTTGTGTAACTTTTCATTTTTTACGTACCAATC
ATTTGGGCCCGAGCAGTTCACGGATTGTATTACCATGCCTTCGCTTGCGG
TGACTGGTTCGTCGACCACGCGTGCGTGGCGGTGGCGCGATGCTCACGAG
TGGTTCCGCGCTAGCCACGGTAGCCGCGACGCACACCTCGGGATGTGCTC
TTGAAGGAGTGGAATATTCACCCATGACCGCTCTATACTGTAGCTGCGGC
GGCCTCTCTCTCTGCGAATATAGTCCCGAATTTGTTTACGTGGCCGATCG
CGGGTTCGACGTTGCCTTTGTTTGATTGGACCGGACGTCCCTTGAAAATT
GTGGAAATGAGAGCGTGCTTGTTTTGAGTTGCCTCCCTCGCAGCGAGTAC
GGGACTTACAGCGCGAAACATGGATACTTTTGGAATTGTATCAGCGTACA
CGCCTCCTTACAAAGAAGTCATGACGGAGACGACCAAAACTTGCAGAGCT
TCATGTGTACGTGATCGATCGTCTCAACCCCCCCCCCCCCCCCAAGGAAT
GAGACGCGTTTAAGTGAATTGCACAAGGTGTTCGTATCCCCTTTTTTGTG
CCAAGGGGTCCTGCATTCCTATGCATACCATATTTATGTATTAATACCGC
TTTGACCGATTTTTATTAGCGATTTTAGAGAACGACATTGTGAGGCCGGA
ATCCTCTCGGAAAAAATGATGCCAAACAAAAACAACTTGATGTTTGTGTT
GAGCGCCACTATTGAACAAATTATTTATTCTTCACCTCACGGGCGTAGCC
GTAGCTACCTACTAGTTGTGATCAATAAACTACATGTTGGGGTAGACGCC
ATCACTGCTGTAGGTTGATTCATTGCTACGATGGCTTGACCACTAGATCT
ACACCAATTCCCCCCCACGTTTTTATATTCGTCGCTCTCGCTCTGTGTGT
TGTTCAGATCAAGGCGAGCATGTGGATGAGCCAGGACTTCCCGCTAACCC
TGGAGCATGTGACACCCATGCTGGAAGTCCTCTCCATGCAGGTTTGTGGG
CGATACGACACCCTCCACACCGCGGGGTCCTGTTCCTGTCCTCACCAGCA
ATGTGCACTTTTTTGGCAATGGCTAGGTCAACTTGCATAATCGTCATGCT
CAGATCCATTCGCGGCCGGCCACGGTGACACTTTGTTTATCAATATTTCG
GGGGTGCACAGTAGCCAAGACCGAATTTCTGCTCAACAGCGTTTGAAGTA
CAAGTATTGAATTTTAAGCGTTGGCCCGAACACTTTCGACACTTAAACAA
AAGTTTTAGATGATGTTGAAGGCCAGGCCGCACTGATTTATGGTGTATTA
TTTTGGGTATATTGTTGTCTGTTTGGTGCTTTTGGTCCTCATTGCTGTGT
TTCTCCGTGACAGCTGTGTCTTACGCAAATTTGATGGGGTGAGTCGCCCT
GCCCTGCTAAACATCTTCGAGCGGGTCGTCGCGCTCATAATTACCAGGGC
TATACACATCACCCTATCCAGACATCCCTTTTACACTTCACCCTCGCCAC
GTTCGGGTGGGGGCAGGCGATGTGGTAAAAATGGCAAACCTACCTAAAGT
GAGGGTAGCTGATGTGCAAATAATTAAACCTACCTAAAGTGGCGGTAGGC
GGTGCGCTAAAATGGCGAACCTACCTAAAGTGGGATTTGGTGATGCGCTG
AAATACTCTGCCTATCATACTTGAAGTGGGGGTAGGTAACGTGCTTTTTC
CAAGGTGATGTGTAGAGCCCTGAAAATTACCGTCGCCGTTGTGGTTGTGG
CCGTGCGGTTACCTTTCGTAAAATATTGCATCGCATTCAATCTATATATA
TCGAATGTCCGCTAGTCAAACGCTGCGCGCACGGACCGCAACATGGCGCT
TAAGTCACGATGCATCACGCTGACGTCGTTGTTTGGTGGCCTGCGCGCAA
CAGCAGCGTGAACTTGGTTGCACCAAAGCGTAGTCGAGTCACATGATTAT
ATCTTCTACGTTTAACGCGGAGTTGCGTGTTAGAACCCCTAAAGACGCCA
GTTACCCCCCGTCCCGTCTTGACGCGCAAAACAGCACCCAACGTAATTGA
GTCTTGGGACCCGTAGTACATTTTCAGCGCAAAAAGGCCCGCGCCGCCCT
TTAAATCGCGCTAAATATACACGAAGATATTTACGATGCGACAACAGAGA
GATCTGCAGCAAGCGCGTTGCTCCTGCAACGCGAGAGATTTGGTACTGCA
AATGACGTTGTGGCAACGAATCAAGACGCCCCCCCCCCCCCCCCTGCCCC
CTATCTTCCGCCGTCAACCCACAGGATAAGGTTATCCACAAGCTGAAGGA
GGTTTTGACCACCAAGGGCATGCGAGAGGCGGGGTTTCCGGCCAAGGTGT
CCCTTCCTCTGTACCTCGGCGTGTTCGCGGCGGTTACGTTCGACAACTGC
AAGATCTTCAAGCGGGGAGAGTTGGAGCCGGAACTGTTCCTCGTCAACCC
GGACTACAGCTCCTCAAGGCGCATGCGGAAGGTGTGCGTGGGCACGGGGG
GCGGGGGGGGGTTACACACGTTTTGTTATTTGGTTGGATTTTTGTGTCTT
TTGGGCGGGGCGGGAGGGAGGTTGGGCATGTTGCTGAGTAGAGGAATACA
TGTGTAGCGTCGCTGTACGGCGCTGCTGTATACCCCACCAGATGTAGAGT
GTCGTTTCTTCACGCGTAATGTTTTAAACCAGATTGACAGTTTTTGTTTG
TTCACGTATACCATTTGACGCTTGCCTCGTTGTGATGTATGACTGTGGGG
TGTGGGGTTTCCTGGTGACCTTGGCACCCAAGTAATACAGTGTGCCGAGG
CTTTCTCTCTCGTGGTTCGAACATCAGTATTGCATGCCTTCAGGAAGTGG
GAAAGTTCGGGCCTTGCGGTTTTTTAGCCGGGCCACACCGCGTGATAATA
TAAAAAACAATAACTCTTTCTTTCGTCGTTCTGTGCTTGTAGCAGCAATT
TCTGGACGAGTTGGCCATATTTTGGGCGACACGCGTCCCGAGCTGAAAGC
GCAAACAGCCCTAAATTCAATTCACAGCTTCCTCTTTGCCATCACACACG
CGACGGCGGTGATCTTAAAACGACCCCTACCACTGCCCCCACCCCCAGGG
AGTGTACGAAGGAGTCATGCCGGGCAACGTCGTAATCCGCGGCAGTGGCG
CCGGTGCCGCCCCCCCCTCAGGCACGCCTCCAACAGCCAAACCAGCTACA
ACAACAACCAGCACCACCCCCAGCAACCGCGGGGTAGGGTTTAGGGTGTG
GCAGCCCTCCTTCGGCCCGGGTTCTTCGCAGACCCCCTTCTCTGACACCG
CGCGCGCGGCCAAGACGAGGAGTCCCGAGGACGTAGGCGGTCCCACGTCC
AGGCGGGTCACCGG
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig9069:361..7724+

>mRNA_S-dermatodea_contig9069.17152.1 ID=mRNA_S-dermatodea_contig9069.17152.1|Name=mRNA_S-dermatodea_contig9069.17152.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2334bp|location=Sequence derived from alignment at S-dermatodea_contig9069:361..7724+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CGCCTTAACGTTACCCGTCCAGGTTACACCAAGCGTCTTAAAACCCAGCG
AGGAAACGTGTCGCTGCTGTTTCTGGGGAACGACAGCCCGGCTCCGGGAA
CTCTGATCAAGCTCGACCACGGAAAGAAGAAGCGCCTTAACGTTACCCGT
CCAGGTTACACCAAGCGTCTTAAAACCCAGCGAGGAAACGTGTCGCTGCT
GTTTCTGGGGAACGACAGCCCGGCTCCGGGAACTCTGATCAAGCTCGACC
ACGGAAAGAAGAAGGTCTACAACGTGCTGCGACGTCTGGAGAGCCCCACC
CCGTCGGAGGTGCGGAGAACATGCAAGCGCTACCTCGCCTCGGGACACTC
CAAGCGCCCGACCCACCAGGTCTACAACGTGCTGCGACGTCTGGAGAGCC
CCACCCCGTCGGAGGTGCGGAGAACATGCAAGCGCTACCTCGCCTCGGGA
CACTCCAAGCGCCCGACCCACCAGGTGGACGCCTTCGTGATAAAGTCGAG
CGAGCTGGACTTCAAGCCCGTCAAGGACAGCGCGGGGAAGATCAAGACCG
GCTCGGTGGGCCCTTGGGCCTGCGAGAGGCACGAGTGCACGGGGGACATG
CAGCTACAGACCTTCCGCAAAGGTCCCGGAGACAACCTCCTCACGGGGCT
TTCCATGAAGGTGGACGCCTTCGTGATAAAGTCGAGCGAGCTGGACTTCA
AGCCCGTCAAGGACAGCGCGGGGAAGATCAAGACCGGCTCGGTGGGCCCT
TGGGCCTGCGAGAGGCACGAGTGCACGGGGGACATGCAGCTACAGACCTT
CCGCAAAGGTCCCGGAGACAACCTCCTCACGGGGCTTTCCATGAAGGATT
ACTTCGACGCTCGGCAGACCTTGGAGGAGAAGATACTGCGGGCGTCGGAT
GGCGATGCGGAGGGCGCTTCCACGGCCGCTCCCGGCCCGTCAGCTTTCTT
CAACTTCGGAGAGCGGTCGCGGGAGAACCAGAAGGCGAAGATCCTCGCCA
GGATCAACACCCCTCACAAGCGCTTCGATAAGAAGGATTACTTCGACGCT
CGGCAGACCTTGGAGGAGAAGATACTGCGGGCGTCGGATGGCGATGCGGA
GGGCGCTTCCACGGCCGCTCCCGGCCCGTCAGCTTTCTTCAACTTCGGAG
AGCGGTCGCGGGAGAACCAGAAGGCGAAGATCCTCGCCAGGATCAACACC
CCTCACAAGCGCTTCGATAAGAAGATCAAGGCGAGCATGTGGATGAGCCA
GGACTTCCCGCTAACCCTGGAGCATGTGACACCCATGCTGGAAGTCCTCT
CCATGCAGATCAAGGCGAGCATGTGGATGAGCCAGGACTTCCCGCTAACC
CTGGAGCATGTGACACCCATGCTGGAAGTCCTCTCCATGCAGGATAAGGT
TATCCACAAGCTGAAGGAGGTTTTGACCACCAAGGGCATGCGAGAGGCGG
GGTTTCCGGCCAAGGTGTCCCTTCCTCTGTACCTCGGCGTGTTCGCGGCG
GTTACGTTCGACAACTGCAAGATCTTCAAGCGGGGAGAGTTGGAGCCGGA
ACTGTTCCTCGTCAACCCGGACTACAGCTCCTCAAGGCGCATGCGGAAGG
ATAAGGTTATCCACAAGCTGAAGGAGGTTTTGACCACCAAGGGCATGCGA
GAGGCGGGGTTTCCGGCCAAGGTGTCCCTTCCTCTGTACCTCGGCGTGTT
CGCGGCGGTTACGTTCGACAACTGCAAGATCTTCAAGCGGGGAGAGTTGG
AGCCGGAACTGTTCCTCGTCAACCCGGACTACAGCTCCTCAAGGCGCATG
CGGAAGGGAGTGTACGAAGGAGTCATGCCGGGCAACGTCGTAATCCGCGG
CAGTGGCGCCGGTGCCGCCCCCCCCTCAGGCACGCCTCCAACAGCCAAAC
CAGCTACAACAACAACCAGCACCACCCCCAGCAACCGCGGGGTAGGGTTT
AGGGTGTGGCAGCCCTCCTTCGGCCCGGGTTCTTCGCAGACCCCCTTCTC
TGACACCGCGCGCGCGGCCAAGACGAGGAGTCCCGAGGACGTAGGCGGTC
CCACGTCCAGGCGGGTCACCGGAGTGTACGAAGGAGTCATGCCGGGCAAC
GTCGTAATCCGCGGCAGTGGCGCCGGTGCCGCCCCCCCCTCAGGCACGCC
TCCAACAGCCAAACCAGCTACAACAACAACCAGCACCACCCCCAGCAACC
GCGGGGTAGGGTTTAGGGTGTGGCAGCCCTCCTTCGGCCCGGGTTCTTCG
CAGACCCCCTTCTCTGACACCGCGCGCGCGGCCAAGACGAGGAGTCCCGA
GGACGTAGGCGGTCCCACGTCCAGGCGGGTCACC
back to top