mRNA_S-dermatodea_contig9060.17146.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9060.17146.1 vs. uniprot
Match: D8LF54_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF54_ECTSI) HSP 1 Score: 204 bits (519), Expect = 5.990e-64 Identity = 101/148 (68.24%), Postives = 123/148 (83.11%), Query Frame = 1
Query: 4 LQTTITRRSLIYDPKSGCNEEDSEALFRKFSQEAGLNPSDASTVSDYIIATKRHNVYASDDPDLRAFIDLDMAVVGRERTAYLAYASQVREEYIHVPSETYCRKRAEILRGFLATDPIYATEKYRQGLEARARANVEAEVALLSEGTI 447
+Q I ++YDPKSG NEEDSEALFRKFS+ GL+ SD++TVSDYIIATKRH+V SDD DLRAFIDLDMAVVGRER+ YL YASQ+REEYIHVP++TYC+KRAEILR FL+T I+AT++Y++ EA+AR NV AEV +L+ G I
Sbjct: 69 VQLAIFFHDVVYDPKSGSNEEDSEALFRKFSEAVGLSASDSTTVSDYIIATKRHSVSGSDDQDLRAFIDLDMAVVGRERSGYLTYASQIREEYIHVPADTYCKKRAEILREFLSTGSIFATDEYQRTFEAKARENVAAEVEMLNAGVI 216
BLAST of mRNA_S-dermatodea_contig9060.17146.1 vs. uniprot
Match: A0A7S3XNL2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNL2_HETAK) HSP 1 Score: 135 bits (341), Expect = 2.530e-36 Identity = 70/147 (47.62%), Postives = 95/147 (64.63%), Query Frame = 1
Query: 13 TITRRSLIYDPKSGCNEEDSEALFRKFSQEAGLNPSDASTVSDYIIATK--RHNVYASDDPDLRAFIDLDMAVVGRERTAYLAYASQVREEYIHVPSETYCRKRAEILRGFLATDPIYATEKYRQGLEARARANVEAEVALLSEGTI 447
+I +IYDP+S NEEDS +F KF +EA L + V YI+ATK H DPDL F+D DMAV+GR Y+AYA+Q+R+E+IH P + YC RA++LRGFLA ++A+ ++R EA ARAN+EAE+A L G +
Sbjct: 86 SIFFHDIIYDPESKTNEEDSAEVFIKFGEEAKLEERLVAKVKAYILATKSHEHGPQVQSDPDLALFLDFDMAVLGRPLAGYMAYAAQIRQEFIHFPVDGYCEGRAKVLRGFLAMGNVFASAEFRAAREATARANLEAEIAELEAGRV 232
BLAST of mRNA_S-dermatodea_contig9060.17146.1 vs. uniprot
Match: A0A1Z5KJ21_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJ21_FISSO) HSP 1 Score: 109 bits (273), Expect = 6.620e-27 Identity = 64/139 (46.04%), Postives = 85/139 (61.15%), Query Frame = 1
Query: 34 IYDPKSGCNEEDSEALFRKFSQEAGLNPSDASTVSDYIIATKRHNVY-ASDDPDLRAFIDLDMAVVGRERTAYLAYASQVREEYIHVPSETYCRKRAEILRGFLATDPIYATEKYRQGLEARARANVEAEVALLSEGTI 447
IYD S NEEDS LF+ F + GL V + I+ATK H+ SD + F+DLD++V+G+ AY YA +R+EY HVP ETYC+KRA+IL FL IY T +R+ E RAR+N+ AE+ LL +G I
Sbjct: 98 IYDATSNTNEEDSVKLFQSF-ETNGL-------VDNMILATKSHHSGDLSDTSAVAFFLDLDLSVLGKTEEAYQQYAILIRKEYSHVPQETYCQKRADILETFLQQQNIYKTSLFREMFEERARSNLAAEIRLLRQGVI 228
BLAST of mRNA_S-dermatodea_contig9060.17146.1 vs. uniprot
Match: A0A1Z5KTL6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KTL6_FISSO) HSP 1 Score: 108 bits (269), Expect = 2.730e-26 Identity = 63/144 (43.75%), Postives = 85/144 (59.03%), Query Frame = 1
Query: 34 IYDPKSGCNEEDSEALFRKFSQEAGLNPSDASTVSDYIIATKRHNVYASDDPDLRA------FIDLDMAVVGRERTAYLAYASQVREEYIHVPSETYCRKRAEILRGFLATDPIYATEKYRQGLEARARANVEAEVALLSEGTI 447
IYD S NEEDS LF+ F A V D I+ATK H+ S DP+++ F+DLD++V+G+ AY YA +++EY HVP ETYC+KRA+IL FL IY T +R+ E RAR+N+ AE+ L +G I
Sbjct: 98 IYDATSNTNEEDSVTLFQSFETNA--------LVDDMILATKSHH---SVDPNMKDTSVIAFFLDLDLSVLGKTEEAYQRYAILIQKEYSHVPHETYCQKRADILETFLQQQNIYKTALFREMFEERARSNLAAEIRCLRQGII 230
BLAST of mRNA_S-dermatodea_contig9060.17146.1 vs. uniprot
Match: A0A6J8CXA8_MYTCO (Uncharacterized protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8CXA8_MYTCO) HSP 1 Score: 108 bits (269), Expect = 8.290e-25 Identity = 55/147 (37.41%), Postives = 87/147 (59.18%), Query Frame = 1
Query: 4 LQTTITRRSLIYDPKSGCNEEDSEALFRKFSQEAGLN--PSDASTVSDYIIATKRHNVYASDDPDLRAFIDLDMAVVGRERTAYLAYASQVREEYIHVPSETYCRKRAEILRGFLATDPIYATEKYRQGLEARARANVEAEVALLSE 438
+ I +IYDPK NEE S LF ++++E +N + S V D+I+ TK H V D F+D+DMAV+GR+ Y YA Q+REEY H+P + Y KR+++L F D +Y+T+++ + +A+ N+ E+A+L+E
Sbjct: 313 VSLAIFFHDIIYDPKKNDNEERSADLFVQYTRECCVNLKEDEISKVKDWILLTKTHQVKDVGSEDYHYFLDIDMAVLGRQEKGYKEYADQIREEYKHIPDKEYKTKRSKVLSNFCKRDRLYSTKEFFDNYDNQAKENMAKEIAILTE 459
BLAST of mRNA_S-dermatodea_contig9060.17146.1 vs. uniprot
Match: A0A1S3J992_LINUN (uS12 prolyl 3-hydroxylase n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3J992_LINUN) HSP 1 Score: 101 bits (252), Expect = 3.440e-22 Identity = 54/145 (37.24%), Postives = 81/145 (55.86%), Query Frame = 1
Query: 31 LIYDPKSGCNEEDSEALFRKFSQEAGLNPSDASTVSDYIIATKRHNVYASDDP------DLRAFIDLDMAVVGRERTAYLAYASQVREEYIHVPSETYCRKRAEILRGFLATDPIYATEKYRQGLEARARANVEAEVALLSEGTI 447
+IYDPK NEE S F+KF++E L ++ VS +I+ TK H P D +D DMAV+G Y Y+ Q+R+EYIH+PSE + +R ++L+ FL IYAT+++R E +AR N++ E+ L +
Sbjct: 85 VIYDPKRDDNEERSAEFFKKFAREMRLPSEESELVSGWIVLTKSHKTPVHATPGFYGKEDWHYLLDFDMAVLGWPDEDYEKYSDQIRQEYIHIPSEHFNSRRVQVLQSFLQIPNIYATKEFRDKFEVQARKNIQEEIRRLQNSLL 229
BLAST of mRNA_S-dermatodea_contig9060.17146.1 vs. uniprot
Match: G4T9B0_SERID (Uncharacterized protein n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4T9B0_SERID) HSP 1 Score: 99.0 bits (245), Expect = 3.140e-21 Identity = 55/142 (38.73%), Postives = 87/142 (61.27%), Query Frame = 1
Query: 31 LIYDPKS--GCNEEDSEALFRKFSQEAGLNPSDASTVSDYIIATKRHNVYASDDP-DLRAFIDLDMAVVGRERTAYLAYASQVREEYIHVPSETYCRKRAEILRGFLATDPIYATEKYRQGLEARARANVEAEVALLSEGTI 447
++YDPK+ G NE S + +F+++ G++ VS I AT +H + P DL F+DLD+ V+GRE+ AY AYAS +R+EY+H P E YC+ R ++L L+ +Y T+ +R L +AR N++ E+ +L +G I
Sbjct: 79 IVYDPKASGGDNELQSILAWEEFTRDLGISTQFKENVSSLIRATIKHAIPDPPAPSDLSLFLDLDLEVLGREQGAYAAYASNIRQEYVHYPLEAYCQGRTKVLE-HLSKGEVYFTDYWRSHLADKARENMQWEMRILQQGRI 219
BLAST of mRNA_S-dermatodea_contig9060.17146.1 vs. uniprot
Match: UPI0014557BFE (uncharacterized protein LOC117297350 n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014557BFE) HSP 1 Score: 94.4 bits (233), Expect = 6.400e-21 Identity = 59/143 (41.26%), Postives = 79/143 (55.24%), Query Frame = 1
Query: 31 LIYDPKSGCNEEDSEALFRKFSQEAGLNPSDASTVSDY---IIATKRHNVYASD------DPDLRAFIDLDMAVVGRERTAYLAYASQVREEYIHVPSETYCRKRAEILRGFLATDPIYATEKYRQGLEARARANVEAEVALL 432
+IY+PK+G NEE S LFR F+ E L SD V + I TK H+ A D F+D DM V+G T Y YA ++R EYIHVP Y RA+IL+ FL T I+AT+ +R+ E +AR N++ E+ L
Sbjct: 94 VIYNPKAGDNEEQSAELFRSFAGEC-LMDSDTELVQEVDRLIRLTKMHSTEAHQVSGMYGSSDEHYFLDFDMQVLGLPETEYACYAQKIRAEYIHVPEMQYRTARAQILKEFLKTPNIFATQDFRELYEIQARDNIKREIQQL 235
BLAST of mRNA_S-dermatodea_contig9060.17146.1 vs. uniprot
Match: UPI001CE2CA78 (hypothetical protein n=1 Tax=Chryseobacterium sp. RG1 TaxID=2801334 RepID=UPI001CE2CA78) HSP 1 Score: 92.8 bits (229), Expect = 1.270e-20 Identity = 48/141 (34.04%), Postives = 81/141 (57.45%), Query Frame = 1
Query: 1 HLQTTITRRSLIYDPKSGCNEEDSEALFRKFSQEAGLNPSDASTVSDYIIATKRHNVYASDDPDLRAFIDLDMAVVGRERTAYLAYASQVREEYIHVPSETYCRKRAEILRGFLATDPIYATEKYRQGLEARARANVEAEV 423
++ ++ +IYD S NEE S R QE GL+ +D S V I+ATK H SDD D+ +D D++++G+++ Y+ Y ++R+EY P Y R ++L+ FLA +P++ TE +R+ E +A+ N+ E+
Sbjct: 64 NISFSVFYHDVIYDASSKSNEEKSADFARVRLQELGLDAADVSQVYHQILATKAHE--RSDDEDINYLLDADLSILGKDQEIYMDYTQKIRKEYSIYPDLLYKPGRKKVLKHFLAMEPVFKTEYFREKYEEQAKRNIAFEI 202
BLAST of mRNA_S-dermatodea_contig9060.17146.1 vs. uniprot
Match: A0A0Q5ZAQ7_9BURK (N-methyl-D-aspartate receptor NMDAR2C subunit n=1 Tax=Ramlibacter sp. Leaf400 TaxID=1736365 RepID=A0A0Q5ZAQ7_9BURK) HSP 1 Score: 90.1 bits (222), Expect = 1.460e-19 Identity = 53/143 (37.06%), Postives = 75/143 (52.45%), Query Frame = 1
Query: 4 LQTTITRRSLIYDPKSGCNEEDSEALFRKFSQEAGLNPSDASTVSDYIIATKRHNVYASDDPDLRAFIDLDMAVVGRERTAYLAYASQVREEYIHVPSETYCRKRAEILRGFLATDPIYATEKYRQGLEARARANVEAEVALL 432
++ I +YDP+ NE+ S R AG + A V ++AT+ H V DDPD R +D+D+A++G + Y QVR EY HV + RA +LRGFL I+AT+ +R LEARAR N+ +A L
Sbjct: 65 VELAIWFHDAVYDPRREDNEQRSADWARDSVLAAGCDAQVADRVHALVLATRGH-VAEGDDPDTRLLLDIDLAILGAAPARFDDYERQVRREYAHVDDAQWGAGRARVLRGFLGRPRIFATDAFRDALEARARDNLARSLAAL 206 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9060.17146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9060.17146.1 >prot_S-dermatodea_contig9060.17146.1 ID=prot_S-dermatodea_contig9060.17146.1|Name=mRNA_S-dermatodea_contig9060.17146.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=149bp HLQTTITRRSLIYDPKSGCNEEDSEALFRKFSQEAGLNPSDASTVSDYIIback to top mRNA from alignment at S-dermatodea_contig9060:339..1059+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9060.17146.1 ID=mRNA_S-dermatodea_contig9060.17146.1|Name=mRNA_S-dermatodea_contig9060.17146.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=721bp|location=Sequence derived from alignment at S-dermatodea_contig9060:339..1059+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9060:339..1059+ >mRNA_S-dermatodea_contig9060.17146.1 ID=mRNA_S-dermatodea_contig9060.17146.1|Name=mRNA_S-dermatodea_contig9060.17146.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=894bp|location=Sequence derived from alignment at S-dermatodea_contig9060:339..1059+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |