mRNA_S-dermatodea_contig9011.17100.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9011.17100.1
Unique NamemRNA_S-dermatodea_contig9011.17100.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig9011.17100.1 vs. uniprot
Match: D7G6E4_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E4_ECTSI)

HSP 1 Score: 244 bits (622), Expect = 4.320e-77
Identity = 134/247 (54.25%), Postives = 171/247 (69.23%), Query Frame = 3 
Query:   90 FPLFMLLLAALLLPTSTAFTGGHSAWRTSSAFLHGGCYSKKIISDHHDTINNIILGRMKPQQGLCSMTTVMPSAEQQAQTLKQTILDTAVGTSNGLEATSEQHEVISKAVNSLVGLNPTEDMTTSELATGMWDLVYTTTPGASAGRVGPFIGEVQQEVDIARDTYVNYVKLGPLTGKLVATWEVANAQEWKVIFKTIAYSLWGAQLVELKFGLEGMWTLTYIDNDMRILTARSLETDRGNLYVLARA 830
            FPL +LL A   +P STAFTG    WR               +++  D +    L R+K +            A ++ + LKQTIL+ A GTSNGL+AT +Q + ISKA+N L   NPT+D+TTSELATG WDL+YTTTPGAS G++GPFIGEVQQEVDIA   YVNYV+LGPLTG+L ATW+V N  +WKV+FK+IA+ L+G QLV+ +    G+WTL+Y+D+DMR+LTARSLE D GN+YVLARA
Sbjct:    9 FPLCLLLAA--FIPISTAFTG-KVPWRLP-------------VAEKRDQV----LPRLKAKHA-------DEVAVEEVRALKQTILEEAAGTSNGLKATPQQRDAISKAINGLAAANPTKDITTSELATGTWDLIYTTTPGASGGKLGPFIGEVQQEVDIAEGLYVNYVRLGPLTGRLEATWDVVNKSQWKVVFKSIAFLLFGQQLVKNELDQAGLWTLSYLDDDMRVLTARSLERDTGNVYVLARA 228
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BLAST of mRNA_S-dermatodea_contig9011.17100.1 vs. uniprot
Match: K8Z6W7_NANGC (PAP_fibrillin domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z6W7_NANGC)

HSP 1 Score: 143 bits (360), Expect = 1.330e-37
Identity = 82/176 (46.59%), Postives = 110/176 (62.50%), Query Frame = 3 
Query:  330 LKQTILDTAVGTSNGLEATSEQHEVISKAVNSLVGLNPTEDMTTSELATGMWDLVYTTTPGASAGRVGPFIGEVQQEVDIARDTYVNYVKL--GPLTGKLVATWEVANAQEWKVIFKTIAYSLWGAQLVELK--FGLEGMWTLTYIDNDMRILTARSLETDRG------NLYVLAR 827
            LKQ +   A    NGL+AT      I    + L+  NPT+++ TS+   G W LVYT+T G SAG++GPF+G+V Q++D A   YVN+V+L  G + G LVATWEV  A EWKVIF+ I + ++G  LV+ K   G  G W LTY+D D+RILTA +L T+ G      N+YVL R
Sbjct:   66 LKQDLYAVAKNKDNGLKATESDKAKILSLASELIKRNPTKNIATSDKVDGTWRLVYTSTSGGSAGKLGPFVGQVLQKIDTAGGDYVNFVRLFGGLVEGALVATWEVKGANEWKVIFQDITFRVFGIPLVDKKPLSGQAGQWKLTYVDEDLRILTAAAL-TNEGKPAKVSNIYVLRR 240
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BLAST of mRNA_S-dermatodea_contig9011.17100.1 vs. uniprot
Match: A0A7S2XW95_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW95_9STRA)

HSP 1 Score: 136 bits (343), Expect = 4.110e-35
Identity = 72/164 (43.90%), Postives = 104/164 (63.41%), Query Frame = 3 
Query:  342 ILDTAVGTSNGLEATSEQHEVISKAVNSLVGLNPTEDMTTSELATGMWDLVYTTTPGASAGRVGPFIGEVQQEVDIARDTYVNYVKLGPLTGKLVATWEVANAQEWKVIFKTIAYSLWGAQLVELKF--GLEGMWTLTYIDNDMRILTARSLETDRGNLYVLAR 827
            I+  A GTSNG++A++E  E I+     L  LN  +DMT+S+L  G WDL+YTT  G SAG++GPF+GEV+Q +D+  D YVN V +G +   L+ATW   N + W VIFK + + L+G  ++  KF     G W +T++D++MRIL A      R N+Y+L R
Sbjct:   68 IVQLAQGTSNGVKASTEIKEKIAGLAERLENLNQAKDMTSSQLLQGEWDLIYTTNQGNSAGKLGPFVGEVKQIIDLQEDRYVNMVTVGIIEAVLMATWITRNNRNWTVIFKDVTFKLFGIPVISKKFPDSARGDWEMTFMDDNMRILYASGKAGVR-NIYILGR 230
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BLAST of mRNA_S-dermatodea_contig9011.17100.1 vs. uniprot
Match: A0A7S4NCX2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NCX2_9STRA)

HSP 1 Score: 135 bits (340), Expect = 2.830e-34
Identity = 77/198 (38.89%), Postives = 114/198 (57.58%), Query Frame = 3 
Query:  255 GRMKPQQGLCSMTTVMPSAEQQAQTLKQTILDTAVGTSNGLEATSEQHEVISKAVNSLVGLNPTEDMTTSELATGMWDLVYTTTPGASAGRVGPFIGEVQQEVDIA----RDTYVNYVKLG--PLTGKLVATWEVANAQEWKVIFKTIAYSLWGAQLVELKFGLEGMWTLTYIDNDMRIL-TARSLETDRGNLYVLAR 827
            G  KP +    + +V P   ++   +K  I D A GTSNG  A+ E  + I+   + L G NPT D++TS    G W L Y+T  G SAG++GPF+GEV+Q + I        Y+NYV+LG   + G L ATW+V    +W+V F ++ + + G  LVE + G EG+W +TY+D D RIL  A  +   + N+Y+LA+
Sbjct:   81 GNNKPTETSTRVPSVSP---ERVLEIKSEIKDLAAGTSNGCTASEEVRDGIAALASELEGANPTPDLSTSPRMDGSWKLTYSTNGGTSAGKLGPFVGEVEQLIRIEGREDSPDYINYVRLGGGAVEGALTATWDVLAEDKWRVKFGSVTFRVLGVPLVEKELGAEGIWRMTYLDEDFRILYAAGGVNVPKENIYILAK 275
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BLAST of mRNA_S-dermatodea_contig9011.17100.1 vs. uniprot
Match: A0A7S2IJB9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IJB9_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.570e-33
Identity = 74/178 (41.57%), Postives = 112/178 (62.92%), Query Frame = 3 
Query:  306 SAEQQAQTLKQTILDTAVGTSNGLEATSEQHEVISKAVNSLVGLNPTEDMTTSELATGMWDLVYTTTPGASAGRVGPFIGEVQQEVDIARDT--YVNYVKLGP--LTGKLVATWEVANAQEWKVIFKTIAYSLWGAQLVELKFGLEGMWTLTYIDNDMRILTARSLETDRGNLYVLAR 827
            +AE+ A TLK TI   A GTSNG++A+    + I+     LV +NPT+    SE   G W LVYTT PG+SAG++GPF G+V+Q + I  +   YVNYV+LG   + G L A+W+V + +EW V F+T+ + + G +++E     EG W + Y+D+D RIL A    ++  N+Y+L++
Sbjct:   54 TAEETA-TLKDTIRQLARGTSNGIDASKSVRDEIATLSKQLVKMNPTKSPALSEKLDGSWALVYTTNPGSSAGKLGPFTGDVEQAIRITGENPEYVNYVRLGGGLVEGMLSASWDVLSKKEWLVKFETLQFRILGIKILEKDLKAEGTWKMEYLDDDFRILYAEGGNSE--NIYILSK 228
[Close]
BLAST of mRNA_S-dermatodea_contig9011.17100.1 vs. uniprot
Match: A0A7S4DWF7_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DWF7_9EUKA)

HSP 1 Score: 130 bits (328), Expect = 8.390e-33
Identity = 70/180 (38.89%), Postives = 109/180 (60.56%), Query Frame = 3 
Query:  297 VMPSAEQQAQTLKQTILDTAVGTSNGLEATSEQHEVISKAVNSLVGLNPTEDMTTSELATGMWDLVYTTTPGASAGRVGPFIGEVQQEVDIARDTYVNYVKL--GPLTGKLVATWEVANAQEWKVIFKTIAYSLWGAQLVELKFGLEGMWTLTYIDNDMRILTARSLET-DRGNLYVLAR 827
            + P +    ++LK  I + + GT+NG++A+  + E I++ +  L   NPT  +T+S L +G W L+YTT  G+SAG++GPF+G+V Q V++    YVN V L  G   G L ATW+  + + WKV FK I   L+G  L E +    G W +TY+D+D R+L A   +  ++ N+YVLA+
Sbjct:   69 LQPKSSADVESLKTAIREKSKGTNNGVDASPARREEIAELLQELEAANPTRKLTSSPLISGSWKLLYTTNDGSSAGKIGPFVGDVVQNVELQDGEYVNIVSLANGAFRGVLTATWDNVSDKLWKVKFKDIKLELFGVVLQEKELPATGTWRMTYLDDDFRVLYAMGGKNQEKENVYVLAK 248
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BLAST of mRNA_S-dermatodea_contig9011.17100.1 vs. uniprot
Match: A0A8J6CA72_DIALT (PAP_fibrillin domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CA72_DIALT)

HSP 1 Score: 128 bits (321), Expect = 2.840e-32
Identity = 77/175 (44.00%), Postives = 101/175 (57.71%), Query Frame = 3 
Query:  321 AQTLKQTILDTAVGTSNGLEATSEQHEVISKAVNSLVGLNPTEDMTTSELATGMWDLVYTTTPGASAGRVGPFIGEVQQEVDIARDTYVNYVKLGP-----LTGKLVATWEVANAQEWKVIFKTIAYSLWGAQLVELK-FGLEGMWTLTYIDNDMRILTARSLETDRGNLYVLAR 827
            A+ LK +I+  A GT NGL A       I      L  LNPT  + TSEL  G W LVYT+T G SAG++GPF+G V+Q  D+ +  Y N+V LGP     +TG+L ATW+V     W+V FK+I++ L G  +V+ K     G W L Y D+D RIL A+   T   N+YVL R
Sbjct:   24 ARPLKSSIVRLAAGTQNGLTADVSTAAQIQALAKLLEELNPTAHLATSELVDGQWQLVYTSTSGGSAGKIGPFVGRVEQHFDLRQGRYKNFVHLGPQAIDLVTGELQATWDVLGDALWRVNFKSISFFLLGLPIVKDKPLSQCGTWRLVYTDDDFRILWAQG-GTKPENIYVLKR 197
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BLAST of mRNA_S-dermatodea_contig9011.17100.1 vs. uniprot
Match: A0A0G4E8H9_VITBC (PAP_fibrillin domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4E8H9_VITBC)

HSP 1 Score: 125 bits (314), Expect = 8.820e-31
Identity = 68/175 (38.86%), Postives = 100/175 (57.14%), Query Frame = 3 
Query:  321 AQTLKQTILDTAVGTSNGLEATSEQHEVISKAVNSLVGLNPTEDMTTSELATGMWDLVYTTTPGASAGRVGPFIGEVQQEVDIARDTYVNYVKLGPLTGKLVATWEVANAQEWKVIFKTIAYSLWGAQLVELKFGLEGMWTLTYIDNDMRILTARSLETDRG------NLYVLAR 827
            A +LK+ I   A G  NG++ T  + E I   V  L   +P +    S+   G+W LVYTTTPG+SAG++GPF+G+V Q +D+  D Y+NYV +GP+   L A+W+V     W+V F+ I + ++G  L + +    G W +TY+D+D RIL AR             N+YVL R
Sbjct:   69 AASLKREIGRIAKGKDNGIKVTPAEREKILSLVKQLESSSPIKAAAQSKRLNGLWRLVYTTTPGSSAGKLGPFVGDVTQMIDMDSDVYINYVDIGPVQAFLEASWDVLGPNRWRVKFQNIGFRVFGIPLAKNELKNVGDWRMTYLDDDYRILWARGSRQQPDASAMPENVYVLRR 243
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BLAST of mRNA_S-dermatodea_contig9011.17100.1 vs. uniprot
Match: A0A7S2ELK7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ELK7_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.060e-27
Identity = 64/181 (35.36%), Postives = 108/181 (59.67%), Query Frame = 3 
Query:  306 SAEQQAQTLKQTILDTAVGTSNGLEATSEQHEVISKAVNSLVGLNPTEDMTTSELATGMWDLVYTTTPGASAGRVGPFIGEVQQEVDIA----RDTYVNYVKLGP--LTGKLVATWEVANAQEWKVIFKTIAYSLWGAQLVELKFGLEGMWTLTYIDNDMRIL-TARSLETDRGNLYVLAR 827
            +A  +A+ LK +I   + GTSNG+ A     + I+     L  +N  +++ +S    G W+LVYTT  G+SAG++GPF GEV+Q + I        Y+NYV+LG   + G L A+W+V +  +W V F+T+ + + G ++VE +   +G+W + Y+D+D RIL  A  +   + N+Y+L++
Sbjct:   66 AAAAKAKELKDSIRQLSKGTSNGIAAPESTRDEIATLCKELEKMNKVKNIASSTKMDGSWNLVYTTNEGSSAGKLGPFTGEVEQAIRILGREENPEYINYVRLGGGLVEGALGASWDVLSNNKWLVKFETLQFRILGIKVVEKELSAQGVWRMEYLDDDFRILYAAGGVNVPKENVYILSK 246
[Close]
BLAST of mRNA_S-dermatodea_contig9011.17100.1 vs. uniprot
Match: A0A7S4CQT7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CQT7_9EUGL)

HSP 1 Score: 117 bits (292), Expect = 1.210e-26
Identity = 80/233 (34.33%), Postives = 123/233 (52.79%), Query Frame = 3 
Query:  186 LHGGCYSKKIISDHHDTIN--NIILG---------RMKPQQGLCSMTTVMPSAEQQ-----AQTLKQTILDTAVGTSNGLEATSEQHEVISKAVNSLVGLNPTEDMTTSELATGMWDLVYTTTPGASAGRVGPFIGEVQQEVDIARDTYVNYVKLGP--LTGKLVATWEVANAQEWKVIFKTIAYSLWGAQLVELKFGLEGMWTLTYIDNDMRILTARSLETDR-GNLYVLAR 827
            + G  YS   + D   TIN   ++LG         R + +  + ++ T     E +      ++LK+ I   A GTSNG  A+ +       AV+ L  LNP  ++ TSE  TG W L+YTT  G SAG++GPF+G+V Q V  +   Y N V+LGP  +   L A W+V    +W+V F+ I +SL+G  + E +    G+W +TY+D+ MR+L A   +  +  N+YVL +
Sbjct:  118 VSGASYSSFKVGDFVATINFSALVLGMFAAASFLLRRRSRPSMWALMTTAGDVETERGGGTVESLKKEIFRLAEGTSNGTSASEDTKAAFLDAVSKLEKLNPEPEIATSEGMTGNWKLLYTTNTGNSAGKLGPFVGDVFQNVVYSSGKYENIVRLGPGIVEACLGADWDVLGPCKWQVNFRYIRFSLFGNVVSEKEVSNCGVWRMTYLDDSMRVLWASGGKNAKVENVYVLVK 350
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9011.17100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7G6E4_ECTSI4.320e-7754.25PAP_fibrillin domain-containing protein n=2 Tax=Ec... [more]
K8Z6W7_NANGC1.330e-3746.59PAP_fibrillin domain-containing protein n=3 Tax=Mo... [more]
A0A7S2XW95_9STRA4.110e-3543.90Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4NCX2_9STRA2.830e-3438.89Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2IJB9_9STRA3.570e-3341.57Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4DWF7_9EUKA8.390e-3338.89Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A8J6CA72_DIALT2.840e-3244.00PAP_fibrillin domain-containing protein n=2 Tax=Di... [more]
A0A0G4E8H9_VITBC8.820e-3138.86PAP_fibrillin domain-containing protein n=2 Tax=Vi... [more]
A0A7S2ELK7_9STRA2.060e-2735.36Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4CQT7_9EUGL1.210e-2634.33Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9011contigS-dermatodea_contig9011:1774..8543 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score248.1
Seed ortholog evalue4.7e-63
Seed eggNOG ortholog2880.D7G6E4
EggNOG free text desc.PAP_fibrillin
EggNOG OGs2DXWT@1,2S6TC@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorychloroplast
Exons4
Model size938
Cds size786
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9011.17100.1prot_S-dermatodea_contig9011.17100.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9011 1879..8496 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925380.1731732-UTR-S-dermatodea_contig9011:1773..18781622925380.1731732-UTR-S-dermatodea_contig9011:1773..1878Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9011 1774..1878 -
1694079894.2963295-UTR-S-dermatodea_contig9011:1773..18781694079894.2963295-UTR-S-dermatodea_contig9011:1773..1878Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9011 1774..1878 -
1622925380.2424738-UTR-S-dermatodea_contig9011:8496..85431622925380.2424738-UTR-S-dermatodea_contig9011:8496..8543Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9011 8497..8543 -
1694079894.3568041-UTR-S-dermatodea_contig9011:8496..85431694079894.3568041-UTR-S-dermatodea_contig9011:8496..8543Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig9011 8497..8543 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925380.1930332-CDS-S-dermatodea_contig9011:1878..20491622925380.1930332-CDS-S-dermatodea_contig9011:1878..2049Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9011 1879..2049 -
1694079894.3098514-CDS-S-dermatodea_contig9011:1878..20491694079894.3098514-CDS-S-dermatodea_contig9011:1878..2049Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9011 1879..2049 -
1622925380.203339-CDS-S-dermatodea_contig9011:3316..35011622925380.203339-CDS-S-dermatodea_contig9011:3316..3501Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9011 3317..3501 -
1694079894.3202877-CDS-S-dermatodea_contig9011:3316..35011694079894.3202877-CDS-S-dermatodea_contig9011:3316..3501Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9011 3317..3501 -
1622925380.2168028-CDS-S-dermatodea_contig9011:4285..44421622925380.2168028-CDS-S-dermatodea_contig9011:4285..4442Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9011 4286..4442 -
1694079894.3304567-CDS-S-dermatodea_contig9011:4285..44421694079894.3304567-CDS-S-dermatodea_contig9011:4285..4442Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9011 4286..4442 -
1622925380.2299166-CDS-S-dermatodea_contig9011:8223..84961622925380.2299166-CDS-S-dermatodea_contig9011:8223..8496Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9011 8224..8496 -
1694079894.346532-CDS-S-dermatodea_contig9011:8223..84961694079894.346532-CDS-S-dermatodea_contig9011:8223..8496Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9011 8224..8496 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9011.17100.1

>prot_S-dermatodea_contig9011.17100.1 ID=prot_S-dermatodea_contig9011.17100.1|Name=mRNA_S-dermatodea_contig9011.17100.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=262bp
MSSAGSCSSGSRGLFPLFMLLLAALLLPTSTAFTGGHSAWRTSSAFLHGG
CYSKKIISDHHDTINNIILGRMKPQQGLCSMTTVMPSAEQQAQTLKQTIL
DTAVGTSNGLEATSEQHEVISKAVNSLVGLNPTEDMTTSELATGMWDLVY
TTTPGASAGRVGPFIGEVQQEVDIARDTYVNYVKLGPLTGKLVATWEVAN
AQEWKVIFKTIAYSLWGAQLVELKFGLEGMWTLTYIDNDMRILTARSLET
DRGNLYVLARA*
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mRNA from alignment at S-dermatodea_contig9011:1774..8543-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9011.17100.1 ID=mRNA_S-dermatodea_contig9011.17100.1|Name=mRNA_S-dermatodea_contig9011.17100.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6770bp|location=Sequence derived from alignment at S-dermatodea_contig9011:1774..8543- (Saccorhiza dermatodea SderLu1190fm monoicous)
CATAGCAACCCACAACACAGCGCATTCCGCTCTTGCTCGCATGCACCATG
AGCTCCGCAGGCTCCTGCTCTTCAGGCTCAAGAGGTCTCTTCCCCCTTTT
CATGCTACTGTTGGCAGCGCTTCTCCTCCCGACCTCCACGGCGTTCACCG
GCGGCCACAGTGCGTGGAGGACCAGTAGTGCGTTTTTGCACGGGGGGTGT
TACAGCAAGAAGATCATCAGCGATCATCATGATACTATTAATAACATCAT
CTTAGGTCGAATGAAGCCGCAGCAGGGTCTGTGCTCCATGACTACGGTGA
TGCCGTCGGCAGAACAACAGGTGGGTTGGGGGTTGGGGGTTGGGGGGAGG
GCACCTGACCGATGACTTTGTCTATGATAGTACACGGACGACATATGTAG
CAGCAGCAGCAGGAGAAAACACACCTACTACTCCAACTCTCAAGTTTGCT
TATGGGCATACGAAGTACTACACTCATTTGAAACACAGCTCAAACTGCGC
TATCAAATATATAGGAAGCTCATATATGAAACATTGACGATCAACGCCGC
GCAAGATAAGAAATGAGGAGGGTGCTTCTAGACGCAGAGCCACAAGACGG
GGTGAGGAGGCCAGGGCGGGCGCTGACCTCCAATGTTTTCAATACGGAGC
TTTCGAAACAGACGGGTTGAAGAATGAGTGTTGGTTCTTCTTGTGATAAT
GCCGTGCTATGATACCGAATTGCAGTATCATACAAGTATCATATACAGGA
CATATCGTACCCCGAGTAACACTACAGACATAACTTAACCCTTTTGGGAC
TAAGGCTGTTTTCGGGTAACTGTTTGCTCTTATTATATGCCCTTTTGTTT
TGGGACTAAGTATTTTTCGGGTAACTGTTTGCTATTATAGCAGCCAACAG
TTACCCGAGAACAGGCTTCGTCCCCAGGCTTAGTCCGAAAAGGGTAAATA
ATAGTAGCAAACAGTTACCCGAAAACACCCTTAATTTTCGATCTGTCTCA
CGGTGGGGCACAGCAGAGTTTTACGGATTGGGTGTCGGTAGAGCAGAGGG
TAATACAACTAGTAACTGCCCTCAGAGTACGGCCTGTCTGTGTTGCGTTA
GAAGAGTACCATGGGCACACACAGTGAAACCCAAATCGATACTTCGTATG
ATATTTTCGCGGAGCACGAAAGAAATAAGAAACGAGGTTGCCTGATGGTG
TTGGACATACACGGCATTTGGTCGTACATTTCTATTTACTTGTAGGTTCG
ACGGGAGGTTCTCGGTGTAACGCCTATACAACGGGGTCTACTGTATATCC
TCTGGGAAGAAAGCTTAGATACGCGTCGACTTGACCGTTGAAGTTTGCAC
TCTAGATGATTCAACGGAACCACTTAACATACATACGCGGTGGGTATATA
CTTCGAAGTATATAGTATGCGTATAACGGGGTTCGTGGGACGACCTGACA
GTGTGTAGAACTGCGCGAGAGTATAGCACGGGGTATTGGTGTAGAACAGC
AGTCAGGGAATACAGTAGCCTGCGAGAGGTGTGCGTTGTCCAGCAGGAGT
ATCAGATGCGGTTCACCCCCATCAATGTCACTCTCCGAATTTTTCCCCTT
TCCTCTTCAATCATCTCCACCTTTATCCTTGTCTTTGACCACATATTGAT
AATAAACGCCACTTTCCTCTATAATATTTGCCTATTTCTTTCTCAACTGT
TACAAGAGTGAGCTTAACAGCCACACACTATACCGCTGTGCAACTTCTTT
CTGCGAGTCTACACGAGGCACCATCGCCACACACACCACATTCCAACATA
TGGTTGATGAGAGCCGGAAGAATAAGAAATAGTACAACAAGGTCTCTGCG
GCTGACGCCGCAACGCTCATCGAGCACGATCGCTAAGGCCAACGATTTAA
CTAAGGCACCAAACGATGGGCATGACTTACAGACTGAGCGGTGGAACGTC
GTGAAGATCAGACGATTGCGGTAGATAAGGATGGCCATAAACCGTCATGA
TGTGTAGTCTTGTCGCATTGTATTTACATTTTACAAAATAATAAACAAAC
ATCCCTACAGGACATACAGCAGCAGCTGCTCTGCTCCTGCAGTAAGTAGT
ATCTATTTTCGCAATGGCCGGCCGGACGTCGGTCGAACACAAGCACCGAG
TGAAAAAAACACGGAGGAAGTACAATGTTAGTGTAGTTGCTGTTCTGCAA
TCACGAGGCCATGTGGTTGACCGATGACGGTCGGTAGAGGCTATACCGTC
TTGAGCCGCCGTTAGGCTAAGCCCGTGGTGAGCTATCACTCAGCTCAGGT
CAGATGAAACGGTTTGTTGAAAGAGAATGCCCGCTCCGGGGGCAGTTAGT
AGGTGGATTGATGAAGGAGTATGAAGCGTAAGGAGGACAAGTGATCAAGT
GGGGTGGACCGCACTTGATACTCAGCTATATCCTACAGAACCAACCGGTC
AATCGGGTCCTGCTTCCAGATGCCGAGGGGCACAACCCCGAGGGTCCAGA
TACAAAACAAAGGAGAAGGATCAAAGCCACATCGATCGGTGACTCTGCAT
ACACCGGTATCGCACGGACCGTCAATACCTCAACGTCGCACTTGTATGCG
CACAAGATGCAGAAAGTAAACTTACCTACACGTGTCCGTTTGTACGAACC
GGCAATAAGCATGCCGCAACCGTTACCGCTTGCCCTTCCTTGTGCGGTCT
TCCTTGCCAAAGAACGACTGACTACAGCTAGCTACAGAACGTCGACTACA
TTCAAGTAGATACGCTGCGAGGTACCTATCACTAGCAGCATACAATACGA
CAGATAATTGCGACCGCTATGCATAATGATACTACTACTACTAATAGTGC
GACCATATTACAACAAACAACACCGACCGTATGATCTGATACGAGAATGG
ACTTTGCTATCACACTGTACCATCATGATGTTGAACATAGTGAACATCGT
AGAAATGATGCCAGGGAAACAAATATGGTAGAAGTGTCGAAGGGTTCACT
GATTGCGACCCCACACGACATATCAAATGCAGAGGTATAGGACATACAAG
TCTTGTACAACTCCAGAAAAACTAAAACAGAGCTGCTGCAGTAGAAGTGT
CGAAAGTAACTGATTATGGTGTCGAAATGTAAGGGTCACAACGAGATGGG
CGCGTCGGGGGCGGGAAATGGAGGTTCCACAGCGCTCAAGAGCAGCGCTC
GAGTGAGGGGCAAGTACATCGTTTTGAACAATCGTTTACTAAATCTAAGT
CGTTGGTCACGTACTCACTGCAGAGGAAGTGATGTAATGGGCCATGGCAT
TATGTGATGTGTGTTTTGTGTTCTACATGCACGTGACGATGATATATAAG
TAACTATCTGTGGAGTGTCACTTGACTTGAACATAATTTTTTTTCGCTTT
TTTACCGAAGAAAACCACTTTTGGACGAGATCTATCTACGGGGAGGAGGA
ACGTTCAAATGTAAGTATCACTTGTGTGTGTGTTCTCCACTTGTAAAGAT
CTATAGTACATACTACATGTGACGATGATAGTATCTACGGAATAGTTCGT
TAAGGGGAATTTGCGATTAGGTTGAATACGTTGTTCGTGTCTTGAGTGTC
AACGGAATAGTAATATTATAGTTCGATTACTAATTAGGTAACAAACAAAC
ATCGAACAGCTATATATTATTATTGTAGGAGTAATACCGCTGTTCTGTTG
TACTTGATTGCTTGCTAATAATGTTTTATTTCTTGGCCCTACCTCAGAAA
ACTGTCGCTGGCCGCGAAGGGACCCCCTCCTTTCTCCTAGTATATATCAT
ATATATAACTCAAAATTGCCGGTATTCCAGACGCTGCCATTCCAACAAAC
AGCTGTAACAACATTGTACCTGGTGTTAGTACGTCAAAATACAGGCAGAA
GAAGAGTCGTCTGCGGCACATACATGGTTTATGAACGAATGCTGACATGT
GGCCACGCTGCTAGAATTTTTTTCCCAGATAACCGCTTACCGTACAGTAC
GTCTACAGTACCTCGTGGGAAACGAAACAGCGTCGAGAGTATCGTGAGTA
GTATAGCTTACGGTCGTAACATAATCCCTCACAATGCATTCCGCGAAACA
GGCTCAAACCCTGAAGCAAACCATCCTTGACACGGCCGTGGGAACGTCGA
ACGGGCTAGAAGCTACCTCGGAGCAGCATGAAGTTATTTCCAAGGCTGTC
AACAGTCTTGTTGGTCTCAATCCGACTGAAGACATGACCACCTCCGAGCT
AGCCACAGGTGAGCTCTACTTGTTGTACGCATACAATCAATTCAATGCGT
TCAAGACCGGCGAGTTCGGCGATAGTAGTAGTAGTAGTGACTGTATGTGT
TCAATAGTGTACGCTATTACAGAGGTACACACTATAACCAAGTAATCAAG
TAGTAATCAAGTAATCAGGACCAATCTCACGACCATAAATACGCGAGAGT
CCCTATTAATATTAATACCTTGAATAACCAAACAACGGCAAAAACTCGTG
AACAAAAAAACGACACGAGGCCTATTAATCTATTAATGGCCTACCCGACA
AACACCGACGCCGGTCGACCGTGAATATAATATATATATATACACCCAAT
CGTTCCGGCCGATTTAGTTTTGCTAAGTTAACATTTGCGACGAATTTGGA
CCCGTTAACTATGGTATACAGTATACAGTATGTATAGTATAGTATATATA
GTATAGTATAGTCCTCCGTAATACCAACGAATTCATTCGATGCCCGTCGA
CGTGTGTGTGCCGCTGTTACATGCCATCCTGTTAGTATCCACACGCACGC
GCCAGTGTTCACCCCCCGTACACAAGAACAACATAATATTAAATAGTGGT
AATCCCCCCTCAGCCTATAGGTAGGGGTGAATGCCGCACCGTGCAGTGTT
GTGTGATACCCAATCAATTGCAGCTCGGCACACAGCTACCGCTACTACTT
TACTGCGCAATGTCTGTGATACTCTCCTCCTTCCTGTGGCTTGGACCATG
CATCATGTAGATTCTGCGCTCTCTTTCGCATTACTTCTTCAGGGATGTGG
GACCTTGTGTACACCACCACGCCGGGAGCTTCCGCCGGGAGAGTAGGCCC
CTTCATCGGAGAGGTTCAGCAAGAAGTCGATATTGCGCGGGACACGTACG
TCAACTACGTCAAGTTGGGGCCGCTCACGGGCAAGCTGGTGGCAACCTGG
GAGGTGGCGAACGCGCAAGAGTGGAAGGTTTGGAATTTATTTGCAAGGAG
GGTGGAACACAACAACAACGGCCGGCGTCGTCGCGGTATATTATTACTAT
TAATATTATTATTATTATCACACATACAGCCGACCGGCCCACCAATGGTT
GTCGATCCCGCTCGTGGTCAGATGAGAAAAAATCGGGAGACCGAGAAAAA
ACCCTACGGATTAGCTATATAGGGAGTACATACAAAGAAGGAATTTACAT
AAACTAACTCTCGGAAACAGAGAGGGCACGCCTCGGGACTTGGGTCTGCT
AAGAAAAGAAAAAACAAACAGTAAAACCTGTACTGTAGAAACAAGAAAAA
CGGCCCCCTCTCCTCTGATACAGCAGGGAGAGCGGCGTGCCCATTTAGTT
CATTTGTTTTTTGTTATTTTGACCGAGACCGTTTTTCGGGGTCCAATTTG
CTAAATATTCGGCTACCATTTACTTCGAAGTAGATGGGCAAATAAATCGA
GGGCTACGCGCGGCTCAAATTTGTTCGAACTTCGCGATCTGAGTGAGGAA
GGTAGATGAGAACGAACCGATGGGGCTATAAATCGCTTAGTTATAATTGA
GGTGGAACATTCTACAGAGGAAGCGAATTTTACCATGTGATACCGAAAAA
AAGGGAATTCACCTGGTATTCTTGGCATTACTACAGTAGTTGTTGTCTGG
ATTTAATGTGCTTTTCCTTTAGCAGAGTGCGTGGGATGCAAAACGCGAAT
GTTCGCCGTTTTTTCAGATGATTGATTGGAAAGCGGGGATGCGGGGAATT
TTTAATCTCTTCTCTACTCAAAAGCGTTTCGATGTACAACACGAGTACTA
ACTAACGCAAACTCTGCTCGTCGAGCGTTGACCATCTCGTAGTCCGCACT
ATTATGCTACTGTTAACACATGGCATTGATAAAACAGTCGAGATCACGGT
GCGGCGACGGAAACAACAAGTATAGTATGTGTATGCCTCCGATTTCCCCC
AGCTGCATGCAGCTTCCTCCTGCCGGCGCTCTTACGCACACCCGGGAACC
ATCCCGTGCGTTTCGCATAGGACCACAAGTAGGTATGTCTGGTCGGTCTT
TAGCCGATCAGCTACTACTACTATGTATACTCGTGAGAACCACCCCATAT
CGCAACTCGAAGTAGTCCACGTGTAGAAATCGATAAACCCGAGCCCAACA
CGCACGTGAGAAAGAAGAGCGCGCAAGTGCTCCTTGCTCTCGAATTTATC
ATTTATCAAGGACCGCATCGCCTTTCATTGCCGGCGGTCGGCAGGTGATA
TTTAAGACGATCGCCTACTCGCTCTGGGGGGCGCAGCTGGTAGAGCTAAA
GTTCGGCCTAGAAGGGATGTGGACCCTCACGTACATCGACAACGACATGC
GGATCCTAACAGCGCGCTCGCTGGAGACAGACCGCGGGAATCTGTACGTG
CTCGCGAGAGCGTGAGGCCCTTGACGGAAAAATCTTGTAGCCTATTTGTT
TGTTGTTTTTGCTGTGACATGCCCTGTCGCAGCTTCCGTTGCTAAGTTTT
GTACTGGTTGACGAGGGGGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9011:1774..8543-

>mRNA_S-dermatodea_contig9011.17100.1 ID=mRNA_S-dermatodea_contig9011.17100.1|Name=mRNA_S-dermatodea_contig9011.17100.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1572bp|location=Sequence derived from alignment at S-dermatodea_contig9011:1774..8543- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGAGCTCCGCAGGCTCCTGCTCTTCAGGCTCAAGAGGTCTCTTCCCCCT
TTTCATGCTACTGTTGGCAGCGCTTCTCCTCCCGACCTCCACGGCGTTCA
CCGGCGGCCACAGTGCGTGGAGGACCAGTAGTGCGTTTTTGCACGGGGGG
TGTTACAGCAAGAAGATCATCAGCGATCATCATGATACTATTAATAACAT
CATCTTAGGTCGAATGAAGCCGCAGCAGGGTCTGTGCTCCATGACTACGG
TGATGCCGTCGGCAGAACAACAGATGAGCTCCGCAGGCTCCTGCTCTTCA
GGCTCAAGAGGTCTCTTCCCCCTTTTCATGCTACTGTTGGCAGCGCTTCT
CCTCCCGACCTCCACGGCGTTCACCGGCGGCCACAGTGCGTGGAGGACCA
GTAGTGCGTTTTTGCACGGGGGGTGTTACAGCAAGAAGATCATCAGCGAT
CATCATGATACTATTAATAACATCATCTTAGGTCGAATGAAGCCGCAGCA
GGGTCTGTGCTCCATGACTACGGTGATGCCGTCGGCAGAACAACAGGCTC
AAACCCTGAAGCAAACCATCCTTGACACGGCCGTGGGAACGTCGAACGGG
CTAGAAGCTACCTCGGAGCAGCATGAAGTTATTTCCAAGGCTGTCAACAG
TCTTGTTGGTCTCAATCCGACTGAAGACATGACCACCTCCGAGCTAGCCA
CAGGCTCAAACCCTGAAGCAAACCATCCTTGACACGGCCGTGGGAACGTC
GAACGGGCTAGAAGCTACCTCGGAGCAGCATGAAGTTATTTCCAAGGCTG
TCAACAGTCTTGTTGGTCTCAATCCGACTGAAGACATGACCACCTCCGAG
CTAGCCACAGGGATGTGGGACCTTGTGTACACCACCACGCCGGGAGCTTC
CGCCGGGAGAGTAGGCCCCTTCATCGGAGAGGTTCAGCAAGAAGTCGATA
TTGCGCGGGACACGTACGTCAACTACGTCAAGTTGGGGCCGCTCACGGGC
AAGCTGGTGGCAACCTGGGAGGTGGCGAACGCGCAAGAGTGGAAGGGATG
TGGGACCTTGTGTACACCACCACGCCGGGAGCTTCCGCCGGGAGAGTAGG
CCCCTTCATCGGAGAGGTTCAGCAAGAAGTCGATATTGCGCGGGACACGT
ACGTCAACTACGTCAAGTTGGGGCCGCTCACGGGCAAGCTGGTGGCAACC
TGGGAGGTGGCGAACGCGCAAGAGTGGAAGGTGATATTTAAGACGATCGC
CTACTCGCTCTGGGGGGCGCAGCTGGTAGAGCTAAAGTTCGGCCTAGAAG
GGATGTGGACCCTCACGTACATCGACAACGACATGCGGATCCTAACAGCG
CGCTCGCTGGAGACAGACCGCGGGAATCTGTACGTGCTCGCGAGAGCGTG
AGTGATATTTAAGACGATCGCCTACTCGCTCTGGGGGGCGCAGCTGGTAG
AGCTAAAGTTCGGCCTAGAAGGGATGTGGACCCTCACGTACATCGACAAC
GACATGCGGATCCTAACAGCGCGCTCGCTGGAGACAGACCGCGGGAATCT
GTACGTGCTCGCGAGAGCGTGA
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