mRNA_S-dermatodea_contig9003.17095.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig9003.17095.1 vs. uniprot
Match: D7FRE2_ECTSI (Checkpoint protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE2_ECTSI) HSP 1 Score: 395 bits (1014), Expect = 2.730e-134 Identity = 198/224 (88.39%), Postives = 214/224 (95.54%), Query Frame = 1
Query: 1 LMQDMLFHEYRIESRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGQPCLSVETRALEIDVVHDIPVKVMPANESSFFRPPEVHMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFSRVEKADATIKTFYTNLTPRFEAMDEQTCRKNMSSVKVDVKKLAAVLSMYSLRFETAICCIIGGYSLVLHVILSPVGIGNLTYYVPVMDAGDDLA 672
L+QDMLFHEYRIESRAGN ILFEANASLLLQALNSG+T+PTCQIKLAKRAGQPCLS+ETRALEI+VVHDIPVKVMPANE+ ++ PP+VH PQVQLELPRQRSLRTV+DRMK IDKFL+VDADMGGQLVF RVEKADATIKTFY+NLTPRFE MD TCRKNMSSVKVDVKKLAAV+SMY+LRF+TAICCIIGGYSLVLHVILSP+ IGNLTYYVPVMDAGDDLA
Sbjct: 56 LIQDMLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRALEIEVVHDIPVKVMPANEAEYYLPPKVHSPQVQLELPRQRSLRTVVDRMKAIDKFLFVDADMGGQLVF-RVEKADATIKTFYSNLTPRFEEMDANTCRKNMSSVKVDVKKLAAVMSMYALRFDTAICCIIGGYSLVLHVILSPINIGNLTYYVPVMDAGDDLA 278
BLAST of mRNA_S-dermatodea_contig9003.17095.1 vs. uniprot
Match: A0A7S2SUZ2_9STRA (Checkpoint protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUZ2_9STRA) HSP 1 Score: 235 bits (600), Expect = 5.880e-71 Identity = 121/222 (54.50%), Postives = 159/222 (71.62%), Query Frame = 1
Query: 1 LMQDMLFHEYRIESRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGQPCLSVETRALEIDVVHDIPVKVMPANESSFFRPPEVHMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFSRVEKADATIKTFYTNLTPRFEAMDEQTCRKNMSSVKVDVKKLAAVLSMYSLRFETAICCIIGGYSLVLHVILSPVGIGNLTYYVPVMDAGDD 666
L Q LFH++RIES++GN IL + LL AL+S R AP CQ+KL KR GQ L +ETRALE+DV+HDIPV VM A+E ++ PP+V PQVQLELP R+L+TVIDR+K I +++Y+ +M G L R E I+T+++NL PR +++DE C +N +VKVD KKLA VLS YSLRF++ I C+I GYSLV+HVILSP G LT+Y+PVM D+
Sbjct: 101 LEQKELFHDWRIESQSGNCILLQLTLQNLLDALHSARNAPQCQLKLTKRNGQAALCLETRALEVDVIHDIPVTVMRASEYQYYCPPDVPQPQVQLELPMSRNLKTVIDRLKNISRYIYLHGEMTGALTL-RAETDSLVIQTYFSNLRPRLDSLDES-CEENRGTVKVDTKKLATVLSSYSLRFDSIIMCLIEGYSLVVHVILSPSNCGTLTFYLPVMSINDE 320
BLAST of mRNA_S-dermatodea_contig9003.17095.1 vs. uniprot
Match: A0A7S1TZY9_9STRA (Checkpoint protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZY9_9STRA) HSP 1 Score: 222 bits (565), Expect = 2.220e-66 Identity = 114/217 (52.53%), Postives = 150/217 (69.12%), Query Frame = 1
Query: 1 LMQDMLFHEYRIESRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGQPCLSVETRALEIDVVHDIPVKVMPANESSFFRPPEVHMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFSRVEKADATIKTFYTNLTPRFEAMDEQTCR-KNMSSVKVDVKKLAAVLSMYSLRFETAICCIIGGYSLVLHVILSPVGIGNLTYYVPV 648
L D LF EYRIES++ + IL EA + L +A SGR AP C +KL KR GQPCL +ETRALE+DV HDIPVKV+ A E + PPEV P VQLELP R LRTV+DR+K D+++ +D DM G L R + +A+IKTF+ NL+PRF+ D++ N+++V+VD +KLA VL+ Y + E AI C + G S VLHV L+P G+G +TYY+PV
Sbjct: 60 LAADKLFAEYRIESQSDDCILLEAGLANLARAFRSGRAAPLCLLKLTKRRGQPCLCLETRALEVDVTHDIPVKVLKAAEIEAYAPPEVPAPSVQLELPASRQLRTVVDRLKPFDRYVSLDGDMHGSLTL-RAQSGEASIKTFFPNLSPRFDGFDDEAAAANNVATVRVDGRKLANVLAFYGVPCEAAIACFVEGVSFVLHVFLAPAGVGTVTYYLPV 275
BLAST of mRNA_S-dermatodea_contig9003.17095.1 vs. uniprot
Match: A0A7R9U1B3_9STRA (Checkpoint protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1B3_9STRA) HSP 1 Score: 212 bits (539), Expect = 8.330e-64 Identity = 101/182 (55.49%), Postives = 133/182 (73.08%), Query Frame = 1
Query: 103 SGRTAPTCQIKLAKRAGQPCLSVETRALEIDVVHDIPVKVMPANESSFFRPPEVHMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFSRVEKADATIKTFYTNLTPRFEAMDEQTCRKNMSSVKVDVKKLAAVLSMYSLRFETAICCIIGGYSLVLHVILSPVGIGNLTYYVPV 648
SGRTAP CQ+KL KR GQPCL +ETRALE+DV HDIPVKV+ A+E + PPEV P VQLEL + R LRT++DR+K DK+LY+D+ M G + RV+ + T+KTF+ NLTPRF+ MDE N +V+VD KKLA+VL+ Y+L E AI C + GY+ ++HV L+P +G LTYY+P+
Sbjct: 2 SGRTAPLCQLKLTKRGGQPCLCLETRALEVDVTHDIPVKVLKASEIEAYAPPEVPSPTVQLELMQSRQLRTIVDRLKVFDKYLYIDSSMAGNMTL-RVQSGEVTVKTFFPNLTPRFDGMDEDAAIDNEVTVRVDGKKLASVLAFYALSCECAIACFVEGYTFIIHVFLAPRSVGTLTYYLPI 182
BLAST of mRNA_S-dermatodea_contig9003.17095.1 vs. uniprot
Match: A0A7S3YAY1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAY1_HETAK) HSP 1 Score: 182 bits (462), Expect = 5.950e-52 Identity = 92/156 (58.97%), Postives = 117/156 (75.00%), Query Frame = 1
Query: 1 LMQDMLFHEYRIESRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGQPCLSVETRALEIDVVHDIPVKVMPANESSFFRPPEVHMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFSRVEKADATIKTFYTNLTPRFEAMDEQ 468
+ Q+ LF +YRIES + N IL E + L +AL SGR AP CQ+KLAKR G+PCL+VETRALE+D+ HD+PVK++ + F PEV PQVQLELPR RS RTVIDR+KGI++ +Y+DADM G + F RV+ +A IKTFY+NLTPRFE DE+
Sbjct: 56 ISQERLFTDYRIESLSNNCILLEVGTANLGRALASGRRAPACQLKLAKRGGRPCLAVETRALEVDIAHDLPVKLLRPGDVRFHLAPEVPRPQVQLELPRGRSFRTVIDRVKGINQHVYIDADMSGTITF-RVQTDNAVIKTFYSNLTPRFETGDEE 210
BLAST of mRNA_S-dermatodea_contig9003.17095.1 vs. uniprot
Match: A0A4D9CSQ4_9STRA (Checkpoint protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSQ4_9STRA) HSP 1 Score: 180 bits (457), Expect = 2.110e-50 Identity = 99/225 (44.00%), Postives = 150/225 (66.67%), Query Frame = 1
Query: 1 LMQDMLFHEYRIESRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGQPCLSVETRALEIDVVHDIPVKVMPANESSFFRPPEVHMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFSRVEKADATIKTFYTNLTPRF-EAM---DEQTCRKNMS-----SVKVDVKKLAAVLSMYSLRFETAICCIIGGYSLVLHVILSPVGIGNLTYYVPV 648
+ Q+ +F EYRI S A N ILFE S L++A +S +TA +IKLAKRAGQPC+ +E RAL+++++H++P++VM A + ++ PP+V MP+VQLELP RS+RTV++R K +D+F +VD DM G L R++ ++TFY+NL PR+ E M DE R S+K+D +K + L ++++++AICC+I LVLHV L+ +G LT Y+P+
Sbjct: 56 IQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRIKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQLELPYNRSMRTVLERFKIMDRFCFVDGDMSGALRL-RLQNDRCHVQTFYSNLIPRYVEGMTDGDEDMRRTEEGGSACCSIKLDSRKFLSALHFMTMKYDSAICCMIEESCLVLHVTLAG-HVGTLTLYLPM 278
BLAST of mRNA_S-dermatodea_contig9003.17095.1 vs. uniprot
Match: A0A836CCR8_9STRA (Checkpoint protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCR8_9STRA) HSP 1 Score: 150 bits (378), Expect = 5.740e-39 Identity = 95/195 (48.72%), Postives = 126/195 (64.62%), Query Frame = 1
Query: 130 IKLAKRAGQ-PCLSVETR--ALEIDVVHDIPVK-----VMPANESSFFRPPEVHMPQVQLELPRQRSLRTVIDRMKG-----------IDKFLYVDADMGGQLVFSRVEKADATIKTFYTNLTPRFEAMDE--QTCRKNMSSVKVDVKKLAAVLSMYSLRFETAICCIIGGYSLVLHVILSPVGIGNLTYYVPVM 651
+KLAKRAG P L VE+ +E++V DIPVK +M A E+ +++ P V + QVQLE+P QRS+R V+DRMKG IDK+LY+DA+M GQLV R+E ATIKTF+T L+PR+E M+ Q R N +++KVD KKLA VL +Y + FE AI C + SL+ HV L+ IG T+Y PVM
Sbjct: 68 MKLAKRAGGVPHLVVESHMSTMEMNVAQDIPVKASGRFLMNAEEADYYKAPVVPVSQVQLEMPVQRSMRAVVDRMKGKCSPPGKRCRCIDKYLYLDANMRGQLVV-RLETDSATIKTFFTQLSPRYEGMERGPQHNRDNKATLKVDAKKLATVLQVYGMSFEGAILCFVENVSLITHVFLAA-SIGTATFYQPVM 260
BLAST of mRNA_S-dermatodea_contig9003.17095.1 vs. uniprot
Match: A0A7S4HHB1_9STRA (Checkpoint protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HHB1_9STRA) HSP 1 Score: 133 bits (334), Expect = 9.960e-32 Identity = 92/253 (36.36%), Postives = 133/253 (52.57%), Query Frame = 1
Query: 16 LFHEYRIESRAGNEILFE---ANASLLLQALNSGR----------------------------TAPTCQI-KLAKR-AGQPCLSVETRAL--EIDVVHDIPVKVMPANESSFFRPPEVHMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFSRVEKADATIKTFYTNLTPRFEAM---DEQTCRKNMSSVKVDVKKLAAVLSMYSLR-----FETAICCIIGGYSLVLHVILSPVGIGNLTYYVP 645
+F E+RIES A N I+FE A L LQ++ SG AP+ + KLAKR G PCL +++ +++ H IPV++M A E + PP + MP VQLELP +R L+TV++R++ I +Y++ M G+L+ R+E A+I+TFY L PRFE + D+ + +KVD KK+ A L E A+ C++ LVLH +L+P GIG TYYVP
Sbjct: 93 IFLEHRIESAADNVIVFEIELAQLKLALQSVLSGGGSIRKRSAIQALHNSSVEGSTEKVMGSLAAPSAIVMKLAKRNGGLPCLCLDSACAGGSVEIHHAIPVRIMRAAEMQYHLPPRIAMPDVQLELPPERPLKTVVERLRSISPHIYIEGSMAGELIL-RIEGDGASIRTFYNKLIPRFEDLKTRDDDSTEPARCILKVDSKKMNACLHWQGTMALGRAVEKAVLCMVENEMLVLHCMLNPGGIGFFTYYVP 344
BLAST of mRNA_S-dermatodea_contig9003.17095.1 vs. uniprot
Match: A0A6G0XB13_9STRA (Checkpoint protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XB13_9STRA) HSP 1 Score: 129 bits (323), Expect = 4.180e-31 Identity = 76/215 (35.35%), Postives = 125/215 (58.14%), Query Frame = 1
Query: 16 LFHEYRIESRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGQPCLSVETRALEIDVVHDIPVKVMPANESSFFRPPEVHMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFSRVEKADATIKTFYTNLTPRFEAMDEQTCRKNM---SSVKVDVKKLAAVLSMYSLRFETAICCIIGGYSLVLHVILSPVGIGNLTYYVPVM 651
LF + IESRA N I F + +AL SG+ A ++L KR G+ LS+ + +++D++ +IP++V+ + +R P V P V LE+P RSLRT+ DR+K + K++ + A M G L RVE ++T YTNL R + +D++ ++ S+V+VD K ++ +LS+ + +CC++ +LV+H IL G+ T YVPV+
Sbjct: 41 LFSDVVIESRANNHIAFALGIANFSRALQSGKEASGVLLRLLKREGRSFLSLRAKTVDLDIIQNIPIEVVSMTTAENYREPNVPPPTVALEMPSLRSLRTITDRLKVMQKYILLQAGMDGTLRL-RVESDAFALQTLYTNLRSRADLVDDENEDMDIPPTSTVRVDAKHISKMLSVDGNAVMSVLCCLVDTQALVMHAILME-QFGSFTCYVPVV 253
BLAST of mRNA_S-dermatodea_contig9003.17095.1 vs. uniprot
Match: A0A8K1FIE9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIE9_PYTOL) HSP 1 Score: 125 bits (315), Expect = 1.140e-29 Identity = 76/221 (34.39%), Postives = 121/221 (54.75%), Query Frame = 1
Query: 1 LMQDMLFHEYRIESRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGQPCLSVETRALEIDVVHDIPVKVMPANESSFFRPPEVHMPQVQLELPRQRSLRTVIDRMKGIDKFLYVDADMGGQLVFSRVEKADATIKTFYTNLTPRFEAMDEQTCRKNMS----SVKVDVKKLAAVLSMYSLRFETAICCIIGGYSLVLHVILSPVGIGNLTYYVPVM 651
L LFHE ++SRA + I F + QAL SGR A ++L KR G L + TRA++ID+V IP++V+ + +R P V PQ+ +E+P +++RT++DR+K + K + ++A G L R+E T++T + +L R + +D+ + S SV VD K L+ + +T +CCI + VLH IL G G+ T Y+PV+
Sbjct: 61 LQNARLFHEVSVQSRADDHIGFLCDIRHFHQALQSGRDASAVMLRLLKRDGASFLCLRTRAVDIDIVQSIPIQVLAMSTVEHYREPNVPAPQIAIEMPPLKNVRTIVDRLKAMHKSITIEASKKGTLAL-RIETHPLTLQTLFAHLRYREDLIDDDEPSEGDSASSCSVTVDAKVLSKAILADGSTTDTVLCCITENRAFVLHSILVD-GFGSFTCYLPVL 279 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9003.17095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9003.17095.1 >prot_S-dermatodea_contig9003.17095.1 ID=prot_S-dermatodea_contig9003.17095.1|Name=mRNA_S-dermatodea_contig9003.17095.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=231bp MQDMLFHEYRIESRAGNEILFEANASLLLQALNSGRTAPTCQIKLAKRAGback to top mRNA from alignment at S-dermatodea_contig9003:240..6722+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9003.17095.1 ID=mRNA_S-dermatodea_contig9003.17095.1|Name=mRNA_S-dermatodea_contig9003.17095.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6483bp|location=Sequence derived from alignment at S-dermatodea_contig9003:240..6722+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9003:240..6722+ >mRNA_S-dermatodea_contig9003.17095.1 ID=mRNA_S-dermatodea_contig9003.17095.1|Name=mRNA_S-dermatodea_contig9003.17095.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1386bp|location=Sequence derived from alignment at S-dermatodea_contig9003:240..6722+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |