mRNA_S-dermatodea_contig900.17093.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig900.17093.1
Unique Name	mRNA_S-dermatodea_contig900.17093.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

[Close]

BLAST of mRNA_S-dermatodea_contig900.17093.1 vs. uniprot
Match: D7G6E0_ECTSI (Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6E0_ECTSI)

HSP 1 Score: 410 bits (1053), Expect = 1.170e-128
Identity = 337/361 (93.35%), Postives = 347/361 (96.12%), Query Frame = 1

Query:    1 RQAKMVEDGLVLAMVMIMSEQEDFDRLCATALFNLTCVSEPYNHIERVLKALVGISSSPSLEVKQSCASAFCNLADLPAMHSRLIEEGAVSTIGSIARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALCNIGMSCATTPATSLPCALTLNTLSKHAEYKARHVTIAEEGCIPAIVTLLRSSEDVPTQYHALMTLCSIVTREENHAPILQQGALASILALTAHTSQSVRQACALVLFNFSCGSAVQERIVQAGAVPAIIALSVGEGVEMASQRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLLKTGDIQCVKY 1083
            ++AKMVEDGLVL+MVMIMSEQEDF RLCAT LFNLTCVSEPYNHIERVLKALVGISSS SLEVKQSCASAFCNLADLP+MH+RLIEEGAVSTIGSIARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SALCNIGMSCA  P TSLPCALTL+TLSK+AEYK   VTIAEEGCIPAIVTLLRSSEDVPTQYHALMTLCSIV REENHAPILQQGALASILALTAHT+ SVR+ACALVLFNFSCGSAVQERIVQAGAVPAIIALS GEGVE+A QRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLLKTGDIQCVKY
Sbjct:  363 QEAKMVEDGLVLSMVMIMSEQEDFGRLCATGLFNLTCVSEPYNHIERVLKALVGISSSSSLEVKQSCASAFCNLADLPSMHARLIEEGAVSTIGSIARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASALCNIGMSCAAMPMTSLPCALTLDTLSKNAEYK---VTIAEEGCIPAIVTLLRSSEDVPTQYHALMTLCSIVMREENHAPILQQGALASILALTAHTNHSVREACALVLFNFSCGSAVQERIVQAGAVPAIIALSAGEGVEVALQRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLLKTGDIQCVKY 720

[Close]

BLAST of mRNA_S-dermatodea_contig900.17093.1 vs. uniprot
Match: F0Y3D4_AURAN (Vacuolar protein 8 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3D4_AURAN)

HSP 1 Score: 167 bits (422), Expect = 2.150e-41
Identity = 141/292 (48.29%), Postives = 187/292 (64.04%), Query Frame = 1

Query:    4 QAKMVEDGLVLAMVMIMSEQEDFDRLCATALFNLTCVSEPYNHIERVLKALVGISSSPSLEVKQSCASAFCNLADLPAMHSRLIEEGAVSTIGSIARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALCNIGMSCATTPATSLPCALTLNTLSKHAEYKARHVTIAEEGCIPAIVTLLRSSEDVPTQYHALMTLCSIVTREENHAPILQQGALASILALTAHTSQSVRQACALVLFNFSCGSAVQE 879
            +AK+VEDG+V+A++ +M++ E+   LC+  LFNLTCV +PY ++ERV+KA V ++SS    VK  CA+A CNL+D+ A+ SR++EEG V  +G     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               +ALCNI + C    +T+  CA  L+ LS+ A  +     I +EGC+PA+VTLL  + D  T  H L  L +++  E NH  +L QG +AS++AL +H S  +R+ACAL LFNFS G A +E
Sbjct:  399 EAKLVEDGVVIALMSLMNQHEELAELCSRGLFNLTCVDQPYMYMERVIKAFVTLASSTMAAVKHVCAAALCNLSDIKAVRSRIVEEGVVQVVGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTITLHYIASAIIRLAMEDQNLPRLVHEGGVTALCNICLRCPRDVSTTQLCASALSLLSQQAIGRQ---AIVQEGCVPALVTLLHEASDASTLRHGLSALTNLLVDEGNHEQVLGQGGVASVIALCSHASSEIREACALALFNFSRGEAARE 687

[Close]

BLAST of mRNA_S-dermatodea_contig900.17093.1 vs. uniprot
Match: A0A6S8WUQ6_9STRA (Vacuolar protein 8 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8WUQ6_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.120e-36
Identity = 139/289 (48.10%), Postives = 182/289 (62.98%), Query Frame = 1

Query:    4 QAKMVEDGLVLAMVMIMSEQEDFDRLCATALFNLTCVSEPYNHIERVLKALVGISSSPSLEVKQSCASAFCNLADLPAMHSRLIEEGAVSTIGSIARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALCNIGMSCATTPATSLPCALTLNTLSKHAEYKARHVTIAEEGCIPAIVTLLRSSEDVPTQYHALMTLCSIVTREENHAPILQQGALASILALTAHTSQSVRQACALVLFNFSCGSA 870
            +AK+VEDG+V++ + +M++ E     C+  LFNLTCV +PY HIERV+KA V +++S    VK  CA+A CNL+D+  + SR++EEG V  +G     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                           +ALCNI + C     T+  CA  L  LS+ A  +     I +EGC+PA+V+LL  S D+ T    L  L +++  E NH  +L QG +A+++ L  H S  +R+AC+L LFNFSCG A
Sbjct:  325 EAKLVEDGVVVSFLTLMNQHEIHSEACSYGLFNLTCVDQPYMHIERVIKAFVSLATSTDATVKHICAAALCNLSDIKPICSRIVEEGVVQVVGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHYIASATTRLATDAQNLPRLVHEGGVTALCNICLRCPQDIPTTKLCASALCLLSQQAIGRQ---AIVQEGCVPALVSLLHESSDLSTIQQGLYALTTLLADENNHEQVLGQGGIAAVIELCGHASPVIREACSLALFNFSCGKA 610

[Close]

BLAST of mRNA_S-dermatodea_contig900.17093.1 vs. uniprot
Match: A0A7S3XJR4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJR4_HETAK)

HSP 1 Score: 89.7 bits (221), Expect = 5.320e-18
Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = 1

Query:    4 QAKMVEDGLVLAM-VMIMSEQEDFDRLCATALFNLTCVSEPYNHIERVLKALVGISSSPSL--EVKQSCASAFCNLADLPAMHSRLIEEGAVSTIGSIA 291
            +A+MVE+G V A+     S QE+   LC   L+NLTCV+ PY +++RV+KA   ++S   L  +V + CASAFCNL DLP  H RLIEEG V    ++A
Sbjct:    7 EARMVEEGAVAALKAAAESHQEELGELCTVGLYNLTCVNRPYQYVDRVIKAFAQLASPNHLNAQVTRVCASAFCNLCDLPECHPRLIEEGVVQAATTLA 105

[Close]

BLAST of mRNA_S-dermatodea_contig900.17093.1 vs. uniprot
Match: A0A7S2G0Q5_9STRA (Vacuolar protein 8 (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G0Q5_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 8.640e-17
Identity = 42/96 (43.75%), Postives = 68/96 (70.83%), Query Frame = 1

Query:    4 QAKMVEDGLVLAMVMIMSEQEDFDRLCATALFNLTCVSEPYNHIERVLKALVGISSSPSLEVKQSCASAFCNLADLPAMHSRLIEEGAVSTIGSIA 291
            +AK+VEDG+V A++ IM++Q+D   LC   LFNLTCV + Y+ +ERV+K+ V ++++ + +VK +C S  CNL+DL A+  R++ EG +  +  IA
Sbjct:  287 EAKLVEDGIVQALLAIMNQQDDLTGLCVRGLFNLTCVEKAYSSVERVIKSFVQLANTDNPDVKHTCVSGLCNLSDLRALRQRMVVEGTLHGLNLIA 382

[Close]

BLAST of mRNA_S-dermatodea_contig900.17093.1 vs. uniprot
Match: K3X5K4_GLOUD (Vacuolar protein 8 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5K4_GLOUD)

HSP 1 Score: 67.8 bits (164), Expect = 2.200e-8
Identity = 37/84 (44.05%), Postives = 50/84 (59.52%), Query Frame = 1

Query:   49 IMSEQEDFDRLCATALFNLTCVSEPYNHIERVLKALVGISSSPSLEVKQSC----ASAFCNLADLPAMHSRLIEEGAVSTIGSI 288
            +++EQ     LC TALFNLTCV EPY  IE VLK  + +++S      + C    A A CNL++   +  RL+EEG VS I S+
Sbjct:  273 LITEQPKVSWLCRTALFNLTCVREPYQKIESVLKMFITLTTSSGGVSTEDCDEITAKALCNLSNFKRIRLRLMEEGIVSAISSL 356

[Close]

BLAST of mRNA_S-dermatodea_contig900.17093.1 vs. uniprot
Match: A0A6G0WW52_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW52_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 6.900e-8
Identity = 34/72 (47.22%), Postives = 48/72 (66.67%), Query Frame = 1

Query:   91 ALFNLTCVSEPYNHIERVLKALVGISSSPSLEVK----QSCASAFCNLADLPAMHSRLIEEGAVSTIGSIAR 294
            ALFNLTCV+EPY  I+ V+K  + I+SS     +    Q CA+AF NL++L  + SRL+EEG VS + ++ R
Sbjct:  351 ALFNLTCVTEPYAQIDAVVKTFISIASSGQATTRDQTLQLCATAFANLSNLKRLRSRLMEEGIVSALAALLR 422

[Close]

BLAST of mRNA_S-dermatodea_contig900.17093.1 vs. uniprot
Match: A0A8K1FG01_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG01_PYTOL)

HSP 1 Score: 65.9 bits (159), Expect = 9.400e-8
Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 1

Query:   55 SEQEDFDRLCATALFNLTCVSEPYNHIERVLKALVGISSSPSLEVKQSC-ASAFCNLADLPAMHSRLIEEGAVSTIGSI 288
            +E     RLC  ALFNLTCV+EPY  IE VLK  + +++SPS   +        CNL++L  +  RL+EEG VS + ++
Sbjct:  420 NEHPKVARLCLAALFNLTCVTEPYTKIESVLKVFLTLAASPSTVTRDEILVKGVCNLSNLKRIRVRLMEEGMVSVVPTL 498

[Close]

BLAST of mRNA_S-dermatodea_contig900.17093.1 vs. uniprot
Match: A0A485L0K5_9STRA (Vacuolar protein 8 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0K5_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.620e-7
Identity = 34/71 (47.89%), Postives = 49/71 (69.01%), Query Frame = 1

Query:   91 ALFNLTCVSEPYNHIERVLKALVGISSSPSLEVKQS---CASAFCNLADLPAMHSRLIEEGAVSTIGSIAR 294
            ALFNLTCVSEPY  I+ V+K  + I+SS     +++   CA+AF NL++L  + SRL+EEG V+ I ++ R
Sbjct:  411 ALFNLTCVSEPYAQIDMVIKTFISIASSGQSARERTLFMCATAFANLSNLKRVRSRLMEEGIVTAISALLR 481

[Close]

BLAST of mRNA_S-dermatodea_contig900.17093.1 vs. uniprot
Match: A0A024TEV8_9STRA (Vacuolar protein 8 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEV8_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 5.950e-6
Identity = 38/121 (31.40%), Postives = 60/121 (49.59%), Query Frame = 1

Query:    4 QAKMVEDGLVLAMVMIMSEQEDFDRLCATALFNLTCVSEPYNHIERVLKALVGISSSPSLE------------------------VKQSCASAFCNLADLPAMHSRLIEEGAVSTIGSIAR 294
            + ++V D  V A+  ++++      +   ALFNLTCV+EPY  I+ V+KALV ++SS S                              CA AF NL+++  + SRL+EEG V  I ++ +
Sbjct:  444 EVRLVADSAVGALTALVNDAPGVAAISERALFNLTCVAEPYAQIDVVIKALVSLASSASSSSGVGGAVGMSAVVTGIGNAVVRERTLHMCAMAFVNLSNMKRVRSRLMEEGIVPAISALLK 564

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig900.17093.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig900.17093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21


Match Name	E-value	Identity	Description
D7G6E0_ECTSI	1.170e-128	93.35	Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus ...	[more]
F0Y3D4_AURAN	2.150e-41	48.29	Vacuolar protein 8 n=1 Tax=Aureococcus anophageffe...	[more]
A0A6S8WUQ6_9STRA	1.120e-36	48.10	Vacuolar protein 8 n=1 Tax=Pelagomonas calceolata ...	[more]
A0A7S3XJR4_HETAK	5.320e-18	47.47	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A7S2G0Q5_9STRA	8.640e-17	43.75	Vacuolar protein 8 (Fragment) n=1 Tax=Dictyocha sp...	[more]
K3X5K4_GLOUD	2.200e-8	44.05	Vacuolar protein 8 n=1 Tax=Globisporangium ultimum...	[more]
A0A6G0WW52_9STRA	6.900e-8	47.22	Vacuolar protein 8 n=1 Tax=Aphanomyces euteiches T...	[more]
A0A8K1FG01_PYTOL	9.400e-8	43.04	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A485L0K5_9STRA	1.620e-7	47.89	Vacuolar protein 8 n=1 Tax=Aphanomyces stellatus T...	[more]
A0A024TEV8_9STRA	5.950e-6	31.40	Vacuolar protein 8 n=2 Tax=Aphanomyces invadans Ta...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig900	contig	S-dermatodea_contig900:18532..23584 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	409.8
Seed ortholog evalue	1.5e-111
Seed eggNOG ortholog	2880.D7G6E0
EggNOG free text desc.	ubiquitin-protein transferase activity
EggNOG OGs	KOG0167@1,KOG0167@2759
COG Functional cat.	G
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Exons	11
Model size	1243
Cds size	1230
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig900.17093.1	prot_S-dermatodea_contig900.17093.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig900 18532..23572 -

The following CDS feature(s) are a part of this mRNA:

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622925379.7658277-UTR-S-dermatodea_contig900:23572..23584	1622925379.7658277-UTR-S-dermatodea_contig900:23572..23584	Saccorhiza dermatodea SderLu1190fm monoicous	UTR	S-dermatodea_contig900 23573..23584 -
1694079894.0439942-UTR-S-dermatodea_contig900:23572..23584	1694079894.0439942-UTR-S-dermatodea_contig900:23572..23584	Saccorhiza dermatodea SderLu1190fm monoicous	UTR	S-dermatodea_contig900 23573..23584 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig900:18532..23584-
coding sequence from alignment at S-dermatodea_contig900:18532..23584-

protein sequence of mRNA_S-dermatodea_contig900.17093.1

>prot_S-dermatodea_contig900.17093.1 ID=prot_S-dermatodea_contig900.17093.1|Name=mRNA_S-dermatodea_contig900.17093.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=410bp
MVEDGLVLAMVMIMSEQEDFDRLCATALFNLTCVSEPYNHIERVLKALVG
ISSSPSLEVKQSCASAFCNLADLPAMHSRLIEEGAVSTIGSIARGASMKT
RRICAIALHSLAASKQERTNLVSKGSVPVLYGLSSDEDLTTLHYVACTLV
RLGMEEQCHARMIQEGAASALCNIGMSCATTPATSLPCALTLNTLSKHAE
YKARHVTIAEEGCIPAIVTLLRSSEDVPTQYHALMTLCSIVTREENHAPI
LQQGALASILALTAHTSQSVRQACALVLFNFSCGSAVQERIVQAGAVPAI
IALSVGEGVEMASQRRCAAALCNLACAPANIARMVEEGVIPNIIHLLKTG
DIQCVKYCCAALCLVAQDVCNCVLIINEGAIPHMLAGAKDGDLVTKQSCC
AVLSTLSSKA

mRNA from alignment at S-dermatodea_contig900:18532..23584-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig900.17093.1 ID=mRNA_S-dermatodea_contig900.17093.1|Name=mRNA_S-dermatodea_contig900.17093.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5053bp|location=Sequence derived from alignment at S-dermatodea_contig900:18532..23584- (Saccorhiza dermatodea SderLu1190fm monoicous)
CGGCAGGCCAAAATGGTGGAGGATGGTTTGGTGCTGGCCATGGTTATGAT
TATGAGCGAGCAAGAAGACTTTGATCGACTTTGCGCCACGGTGAGAGAGG
CGAACTGGGCATGCGACCCCGTCCAAAGTCAAGCTCGTTTGAGTTTTGTG
TTCAGCACTATAGTTTCGATAACACACGTCGCCCGACCGAATCGATATTC
CGTGCCCGGCGATGTTCAATTCTCCACAAGGTACGCGCGACTTTTGATAA
AACCGTAGCGTTTCAGATCTTATTTTGCGCATCAAGACCCAACGCCGACC
CAACGCCAACACTGTGCGTATGCTGCACCGTCCCGCCCCTCCTGTCGTTG
CACCACAATGTACGCTAACCTCTTTGTCGTGTTTTAGGCGCTCTTCAACC
TAACGTGTGTGTCTGAGCCGTACAACCACATCGAGAGGGTACTCAAGGCA
CTTGTCGGGATTTCCAGCTCTCCTTCCCTGGAGGTAAGAAATGGAAAAGA
TCGATAAGGTGCATAACGATTCCAAGTCATACACTGGCTGCACACAACTT
GGACCTCGCGGTTGCTAGATCGACAATCCTAACATGCCGAATCGATCATG
CTTTGGCCTAAAATGGGAGCGAGGCTAGGTAGAGAGAACGACGTCGGGGC
TAAGTCCACAGTAGCTATTCTCGGCATTTGTGCAAAACTGCTTCGCTTCC
TCCGTACTATTCGCACATCGACGAAGAGGTTGGCTCTTTTAAGCACCGAA
AGTGCGAACGCTCATTGGTTGCGCATCATACTATTTCACTGGACCAAACA
TTTAGGTGAAGCAATCGTGCGCGAGCGCGTTCTGTAACCTGGCGGATCTA
CCTGCCATGCACTCCCGGCTCATCGAAGAGGGAGCAGTCTCTACGGTGGG
TGACCGTGTTATTTGCAGTCGTATTGGTATGGCCTGTTACTGTCAATTTC
ACATAAAGTTGAAGTTGATTCGCTATCACTACAGTCGGAATCACGGTGAT
AAAACGAAACGAGCAAACTTAAAAGCAAAATCGAGTGAAAACAAAACAAA
ACAAAACGTAGAGCTGCTGCGTATGTTCCGTCTTTCGATCACCGATTCCT
AACAACAACGTTGCAAGCGCCATGTATGCGGCTATGTAGCGGGTACAGCC
GAGTACTGGCGAAGGCGACAATTTTGTGGCAGGAGCATAGAGATATACGT
GCATCGCCTCGAAACCCTCTTGCGAAGGAAACATGTGATTCAGGCTAATA
TAGGCCAGCCTCGAGTGGAGTTCGTAAACTTAGACTCTAACGCATGGAAT
CCGTCGAGTACACGTTGCGGTGGCCATCGCACACCAAAGCCGAAATGCCG
CCGTCCGTGAATGAACGCGTCGCAGATTGGCAGTATTGCCAGAGGGGCGT
CAATGAAGACCCGCCGTATCTGCGCCATTGCGTTGCACTCTCTCGCAGCC
AGCAAACAGGTATGAACAAAGCGACCGGCTGTCTGTCAGATCACGCTTGC
CGACCGAATGAAAAACGCTGTGGTAGGCGTAAGGTTTTAAACTCCCAACA
CCACACCGAACACACCTCGCGCAAGAAGGTGTACCCTACTTAAGCATGCG
GGTTGTCGAGAGTGTTGCGACCCACGTTTGCTGACCTATCACAGTACAAG
GTCGGCCAGGAGACTCACGTGCGGCGACCTACTTCGTAGGATGTGTTACT
TTAGTACGTTGCTACATTTATGCTCTAATGAGAACATGACTGATTTCGGG
GTGATGCTTGTGTTTCACATCTAGTTGTCATCGAGCCCGGTCGACGCCTC
CTTTTGGCGCGTATCATAACAAATGTATCATAACAATATAACGGGTTTTG
GCCTGCCCTCGCCCCCACGCACTGTATCCGCTCCGACTATCCCCGTGGCG
ATAGGAGCGCACAAATCTCGTGTCCAAGGGTAGCGTACCTGTTCTGTATG
GTTTAAGCAGCGACGAGGATCTGACAACGCTGCACTACGTGGCCTGCACG
CTGGTTAGGCTGGGCATGGAAGAACAATGCCATGCGCGCATGATACAGGA
GGGCGCTGCCAGGTACGGCTCTTCCTGCAAGGCATACAGAACGAGCGTTT
CGCAGACGTCCGTAGCTCGCAACAAGGATCTGTTTATTTGCACGAGACGG
GTATGCTGTGCGCTCTGCCTTCATCGCAGGCTTGGGTAGTGACCACCGCC
TTGACCTCAATTCGCCTGATTCGATATACCTGACAATACAGTCCCCTCTG
CTTGAAAACGATTGTCTTACGTCACCCCCTCTAGTGGCTGCAGGGTTCCA
CTCGATATGAGTCGATACGAAAGACAATTGGGACAAAAGGTCGAGGCAGA
AGCCTGGCATTGTTGAACGTGGTCGCAAGCAAATCTTCGAGGACATCCTC
TCTCTAATCGGGAACGTAAGCGCACCGCTCATTTTTACCATCATTCCCGT
ATCGCTCGTTTCTCGTGGTCTCCTGTTATATGGTGTTGACGCCCTGCGCA
GCGCCCTGTGCAACATTGGCATGTCGTGCGCCACAACGCCAGCGACGAGC
CTCCCGTGCGCCCTCACGCTGAACACGCTCAGCAAACACGCCGAATACAA
GGCGAGGCATGTCTTGTAGCATTTTAGGTCCGATTATTCTTGACACAGCG
TAGGCCGAAGAGATATTGTTTCAGCTCCATCGAAAACCGAAAACTCTTGT
GTCGTCGCGCGGATGTTGTCAGACGCATGCCGAGATCCAGAATGTTTCAA
CTCTCCCTCGTTCTTTGCACGGCAGTGTATGGTCACACTAGATAATTAGT
TGTTCAGTCGCCTTATAACGCAATTCTTGATGGCTTGGAGTCTTTGGACT
TGCGTAAGTTCGGAATTTCGAGGCCGCGATAAAAACCTGAGCACCTGTGA
TTCCGCCGATAAAATGTTCAAATGAACTTCGTCCAAACACGCAAGGCCGT
CTAACACGTTGTCCTGTTTCGGCACAGGTAACGATTGCAGAGGAGGGATG
CATACCTGCCATCGTAACTCTTCTGAGGTCAAGCGAGGACGTTCCGACTC
AGTATCACGCACTCATGACGCTTTGCAGGTGTGTGTGAGCGTGTGTGCGT
ATGTAGACGTCGCTAAAGATATAGCAAGGGACTGCAGGCGTGCTAACCCC
TGCTTGTATCTCACGATTTGGTGTGTTCATGCTACTTACTATCGCTTGCA
TGCCTTGGCGACGCGACCGTTCTGGCGCCCACTTTGCCGTGGGCGATTTG
GAGCTCACAGGCACATGCCAAAGTGAACAGCGTTGCGCCAACTCCATACC
GGTAGTGCGAGCGTTTTCTCTCCTGTATTGCCCGCGTATGCTCGACATGC
TCCAAACCGGCATCGTAGGATCGCAACGTCAACATCAGCAGCCCAGACAT
ATGAGTGCAGTGTCCTTGCTCGACAACCCAAGAGCGCTTAGCATCTGATA
GTCCTCCTGGACCCAACGATGCCCCCTATGCCAAGAAGCTTGGTGAATAT
CGTAACAGTATATATTAAATAATCTCTGCACGTTCCCGCTTCCGCCCCCC
GTCTCTGGACGATGCGGATTTCAGCATTGTCACGCGGGAGGAAAATCACG
CCCCCATCCTGCAACAGGGGGCACTTGCCTCCATTCTTGCCCTTACGGCA
CACACCAGCCAGAGCGTGAGACAGGCGTGCGCCCTCGTGCTGTTTAACTT
CAGCTGCGGCTCGGCGGTTCAGGTGTGTGAAATAAGACATATCGTAAGAT
TTATTTCACTAAACTAGACGTAGTCGATAAGTGTTATATTTCCGGATATT
TGGGCCGGACGTGATGAAGCGTAAATATCCAAACACGTGAGAGATGGAGG
CGGGGCACTCAACGGCCGAAAAAAAACATGTAACCCCGTGACAGACCTCA
TTTCACGAAACTGTCACAAGTCTCAAAAACAAATATGGCATGCAATAGTC
TTGACAATCTGTACGCTCCCCCGCCATGGACAACCTATTGTATGAACACC
GCGTGCAAAACTATCGTTGGGGAGACAAGTCTCTCCCCACACATGGTCAA
TGAAACAACGCGCCAGAGGGGTGGATGGTCAACTGTAAACCCGTCGACTG
GCGCCGCGGGTAACGCCCCTCTGTCCCCTGCTCTCAGGAACGAATCGTAC
AGGCTGGTGCGGTACCCGCCATCATCGCGCTGTCCGTGGGAGAAGGTGTG
GAGATGGCCTCGCAAAGGCGATGCGCGGCCGCCCTCTGCAATCTCGCTTG
CGCCCCTGCCAACATCGCCAGAATGGTCGAGGTCTGTTTGGATTATGGCA
AGCAAGCATGCACGCGATGTCGAGCTTTTGACGGGATACTGATGCAGCTG
TATGTAATGGAATTTGTGCGCCTAGCACCTTGGTCGAGGAATTCGTCAGC
ACCGGTTGCATTTTCTACAAACGTCATGCGATGTGCTCATAAACTTCTAC
AACCGAACTAATTACCTGCCCAAACAGGAAGGAGTGATACCCAACATCAT
ACATCTCCTCAAGACCGGCGACATACAGTGTGTCAAGGTGGGAACTATCG
TCCATTTGCTCTTTCCGTTCGACAGGATTCCAGGATGATAGCCTGCTTGG
TGTTGTTTGATGAGGAGAGTTGTGCTCAGACGTTCACATGCTGCCGAGCC
ACTTGCTACTTTCTGTATTCAGATACGCAATGGTAGAACGACAGCTGAAT
CGGATCGCAATACTGTGAAGTTTATCAGGGCAGCAACCTGAATGCCTGCA
TCCAACAGTACCGTGGTACGCCATTTACTGTATTGTTTCCGGAGGGACGG
CAGCCAGGCCTTGTCAAGGGGCATGATCGACGTATTTTCGTGCACATGCC
CCATGCACTCGCTCTGTCGTTGCCTTCGCCACCGGGAACAGTACTGTTGC
GCGGCTCTGTGCCTGGTGGCCCAGGACGTTTGCAATTGTGTGCTGATCAT
CAACGAGGGTGCAATCCCGCACATGCTGGCCGGGGCTAAGGACGGAGACT
TGGTTACCAAGCAATCCTGCTGCGCGGTGCTCTCCACCTTATCGAGCAAG
GCG

Coding sequence (CDS) from alignment at S-dermatodea_contig900:18532..23584-

>mRNA_S-dermatodea_contig900.17093.1 ID=mRNA_S-dermatodea_contig900.17093.1|Name=mRNA_S-dermatodea_contig900.17093.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2460bp|location=Sequence derived from alignment at S-dermatodea_contig900:18532..23584- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTGGAGGATGGTTTGGTGCTGGCCATGGTTATGATTATGAGCGAGCA
AGAAGACTTTGATCGACTTTGCGCCACGATGGTGGAGGATGGTTTGGTGC
TGGCCATGGTTATGATTATGAGCGAGCAAGAAGACTTTGATCGACTTTGC
GCCACGGCGCTCTTCAACCTAACGTGTGTGTCTGAGCCGTACAACCACAT
CGAGAGGGTACTCAAGGCACTTGTCGGGATTTCCAGCTCTCCTTCCCTGG
AGGCGCTCTTCAACCTAACGTGTGTGTCTGAGCCGTACAACCACATCGAG
AGGGTACTCAAGGCACTTGTCGGGATTTCCAGCTCTCCTTCCCTGGAGGT
GAAGCAATCGTGCGCGAGCGCGTTCTGTAACCTGGCGGATCTACCTGCCA
TGCACTCCCGGCTCATCGAAGAGGGAGCAGTCTCTACGGTGAAGCAATCG
TGCGCGAGCGCGTTCTGTAACCTGGCGGATCTACCTGCCATGCACTCCCG
GCTCATCGAAGAGGGAGCAGTCTCTACGATTGGCAGTATTGCCAGAGGGG
CGTCAATGAAGACCCGCCGTATCTGCGCCATTGCGTTGCACTCTCTCGCA
GCCAGCAAACAGATTGGCAGTATTGCCAGAGGGGCGTCAATGAAGACCCG
CCGTATCTGCGCCATTGCGTTGCACTCTCTCGCAGCCAGCAAACAGGAGC
GCACAAATCTCGTGTCCAAGGGTAGCGTACCTGTTCTGTATGGTTTAAGC
AGCGACGAGGATCTGACAACGCTGCACTACGTGGCCTGCACGCTGGTTAG
GCTGGGCATGGAAGAACAATGCCATGCGCGCATGATACAGGAGGGCGCTG
CCAGGAGCGCACAAATCTCGTGTCCAAGGGTAGCGTACCTGTTCTGTATG
GTTTAAGCAGCGACGAGGATCTGACAACGCTGCACTACGTGGCCTGCACG
CTGGTTAGGCTGGGCATGGAAGAACAATGCCATGCGCGCATGATACAGGA
GGGCGCTGCCAGCGCCCTGTGCAACATTGGCATGTCGTGCGCCACAACGC
CAGCGACGAGCCTCCCGTGCGCCCTCACGCTGAACACGCTCAGCAAACAC
GCCGAATACAAGGCGAGGCATCGCCCTGTGCAACATTGGCATGTCGTGCG
CCACAACGCCAGCGACGAGCCTCCCGTGCGCCCTCACGCTGAACACGCTC
AGCAAACACGCCGAATACAAGGCGAGGCATGTAACGATTGCAGAGGAGGG
ATGCATACCTGCCATCGTAACTCTTCTGAGGTCAAGCGAGGACGTTCCGA
CTCAGTATCACGCACTCATGACGCTTTGCAGGTAACGATTGCAGAGGAGG
GATGCATACCTGCCATCGTAACTCTTCTGAGGTCAAGCGAGGACGTTCCG
ACTCAGTATCACGCACTCATGACGCTTTGCAGCATTGTCACGCGGGAGGA
AAATCACGCCCCCATCCTGCAACAGGGGGCACTTGCCTCCATTCTTGCCC
TTACGGCACACACCAGCCAGAGCGTGAGACAGGCGTGCGCCCTCGTGCTG
TTTAACTTCAGCTGCGGCTCGGCGGTTCAGCATTGTCACGCGGGAGGAAA
ATCACGCCCCCATCCTGCAACAGGGGGCACTTGCCTCCATTCTTGCCCTT
ACGGCACACACCAGCCAGAGCGTGAGACAGGCGTGCGCCCTCGTGCTGTT
TAACTTCAGCTGCGGCTCGGCGGTTCAGGAACGAATCGTACAGGCTGGTG
CGGTACCCGCCATCATCGCGCTGTCCGTGGGAGAAGGTGTGGAGATGGCC
TCGCAAAGGCGATGCGCGGCCGCCCTCTGCAATCTCGCTTGCGCCCCTGC
CAACATCGCCAGAATGGTCGAGGAACGAATCGTACAGGCTGGTGCGGTAC
CCGCCATCATCGCGCTGTCCGTGGGAGAAGGTGTGGAGATGGCCTCGCAA
AGGCGATGCGCGGCCGCCCTCTGCAATCTCGCTTGCGCCCCTGCCAACAT
CGCCAGAATGGTCGAGGAAGGAGTGATACCCAACATCATACATCTCCTCA
AGACCGGCGACATACAGTGTGTCAAGGAAGGAGTGATACCCAACATCATA
CATCTCCTCAAGACCGGCGACATACAGTGTGTCAAGTACTGTTGCGCGGC
TCTGTGCCTGGTGGCCCAGGACGTTTGCAATTGTGTGCTGATCATCAACG
AGGGTGCAATCCCGCACATGCTGGCCGGGGCTAAGGACGGAGACTTGGTT
ACCAAGCAATCCTGCTGCGCGGTGCTCTCCACCTTATCGAGCAAGGCGTA
CTGTTGCGCGGCTCTGTGCCTGGTGGCCCAGGACGTTTGCAATTGTGTGC
TGATCATCAACGAGGGTGCAATCCCGCACATGCTGGCCGGGGCTAAGGAC
GGAGACTTGGTTACCAAGCAATCCTGCTGCGCGGTGCTCTCCACCTTATC
GAGCAAGGCG