mRNA_S-dermatodea_contig9.17087.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9.17087.1 vs. uniprot
Match: D8LPR4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPR4_ECTSI) HSP 1 Score: 347 bits (889), Expect = 1.210e-99 Identity = 203/376 (53.99%), Postives = 256/376 (68.09%), Query Frame = 1
Query: 2446 IENLAKVLRRVYDPTLQRLWADWAVSEVDGQWLLIEIHGVKTDTDIRIAAATKAAAPVVREVKSKVF-AAHNIPPAHYCGDVDDLKARLATAHPTQDMSLIEMSKRVRSA--SKRRPVRPPTPSKVSDKSRKILF--KKGAWERESDTRNG----ARRMVHQYWRCAGDFCETHCKSPGSINDD------GKCENDAASAARSVQLHTD---GAGERRPGKQGTRQERDTRGAGEGEGHQGGS-CGRGAEGEDDIVGGRKHALAVEVPRTVLFRLVLNARAALLGWRVSASEFALMEKPVQLCSSCYTVCYALERERIEYTTRAMEAEEVAAEALKPSRNLRPPGWKSRVQHELEDSLDTDRDIVSRLMDNFKATA 3516
+E L VLR+ YDPTLQRLWADWAV E +GQW L+E+HGVKT+ D+R AAA KA P + EV+SKV + IPP H CGD D+L+AR++ A PTQ++S +E SK++ + SKRRP RPPTPS V++ ++K L ++GA ER+ G ARRM++QYWRCAGDFCETH + D G +N + + V ++ G R G +G ++ T G G G+ C EDDIVG RKHAL+VE PRTVLFRLVLNARAALL WR SA+EF++MEKPVQLCS CY VC +ER+RIE T RAM+AEE AA+A K RN +PPGWKSRVQHELE+SL DR +VSRL+D+F+A A
Sbjct: 1 MEKLTTVLRKAYDPTLQRLWADWAVHEDNGQWYLVEVHGVKTEADLRNAAAAKAVPPALAEVESKVSRSTRRIPPKHICGDPDELRARISAAGPTQELSFVEPSKKMIAVAESKRRPRRPPTPSMVAESTKKALLSRREGASERKKSVPKGGDGGARRMLNQYWRCAGDFCETHPDGQRQASADATGDKKGNRDNKVETGSLVVSQPSERARGRPVRNRGLEGASEKSSTGGGGXXXXXXDGTECE-----EDDIVGRRKHALSVETPRTVLFRLVLNARAALLRWRPSAAEFSMMEKPVQLCSVCYMVCSTIERDRIETTRRAMDAEEEAAKAGKARRNRKPPGWKSRVQHELEESLSADRHVVSRLIDSFEAAA 371 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9.17087.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9.17087.1 >prot_S-dermatodea_contig9.17087.1 ID=prot_S-dermatodea_contig9.17087.1|Name=mRNA_S-dermatodea_contig9.17087.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=1350bp MQSAGPPANRWARSLRLETALQDQHRRTLHSESSGVANNVTGSERWNAARback to top mRNA from alignment at S-dermatodea_contig9:29480..39184- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9.17087.1 ID=mRNA_S-dermatodea_contig9.17087.1|Name=mRNA_S-dermatodea_contig9.17087.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=9705bp|location=Sequence derived from alignment at S-dermatodea_contig9:29480..39184- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9:29480..39184- >mRNA_S-dermatodea_contig9.17087.1 ID=mRNA_S-dermatodea_contig9.17087.1|Name=mRNA_S-dermatodea_contig9.17087.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=8100bp|location=Sequence derived from alignment at S-dermatodea_contig9:29480..39184- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |