mRNA_S-dermatodea_contig89905.17075.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig89905.17075.1 vs. uniprot
Match: D8LGX1_ECTSI (Acyl-coenzyme A dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGX1_ECTSI) HSP 1 Score: 139 bits (349), Expect = 1.310e-36 Identity = 69/72 (95.83%), Postives = 72/72 (100.00%), Query Frame = 1
Query: 1 SFMNGTVEGEEVFIPLDQIIGGRERAGFGWNMLMDCLAEGRGISLPAMSVSASKMTSSIVGAYARIRKQFKV 216
SFMNGTVEGEEVFIPLDQIIGGRERAGFGWNMLMDCLAEGRGISLPAMSV+ASKMT+S+VGAYARIRKQFKV
Sbjct: 303 SFMNGTVEGEEVFIPLDQIIGGRERAGFGWNMLMDCLAEGRGISLPAMSVAASKMTASVVGAYARIRKQFKV 374
BLAST of mRNA_S-dermatodea_contig89905.17075.1 vs. uniprot
Match: A0A835YIS3_9STRA (Acyl-coenzyme A dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIS3_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.890e-32 Identity = 62/72 (86.11%), Postives = 67/72 (93.06%), Query Frame = 1
Query: 1 SFMNGTVEGEEVFIPLDQIIGGRERAGFGWNMLMDCLAEGRGISLPAMSVSASKMTSSIVGAYARIRKQFKV 216
+FMNGTVEGE VFIPLDQIIGG+ RAGFGWNMLMDCLAEGRG+SLPAMSV+ASKM + VGAYARIRKQFKV
Sbjct: 291 AFMNGTVEGENVFIPLDQIIGGQARAGFGWNMLMDCLAEGRGVSLPAMSVAASKMVAGTVGAYARIRKQFKV 362
BLAST of mRNA_S-dermatodea_contig89905.17075.1 vs. uniprot
Match: A0A7S1TSL9_9STRA (Acyl-coenzyme A dehydrogenase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSL9_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.440e-28 Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 1
Query: 1 SFMNGTVEGEEVFIPLDQIIGGRERAGFGWNMLMDCLAEGRGISLPAMSVSASKMTSSIVGAYARIRKQFKV 216
SFMNGTVEGE+VFIP+D I+GG+ERAGFGWNMLMDCLAEGR ISLPA +V+A++ + VGAYARIRKQFKV
Sbjct: 287 SFMNGTVEGEDVFIPMDCIVGGQERAGFGWNMLMDCLAEGRSISLPASAVAAARFGVTAVGAYARIRKQFKV 358
BLAST of mRNA_S-dermatodea_contig89905.17075.1 vs. uniprot
Match: A0A7S1TSJ0_9STRA (Acyl-coenzyme A dehydrogenase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSJ0_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.440e-28 Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 1
Query: 1 SFMNGTVEGEEVFIPLDQIIGGRERAGFGWNMLMDCLAEGRGISLPAMSVSASKMTSSIVGAYARIRKQFKV 216
SFMNGTVEGE+VFIP+D I+GG+ERAGFGWNMLMDCLAEGR ISLPA +V+A++ + VGAYARIRKQFKV
Sbjct: 287 SFMNGTVEGEDVFIPMDCIVGGQERAGFGWNMLMDCLAEGRSISLPASAVAAARFGVTAVGAYARIRKQFKV 358
BLAST of mRNA_S-dermatodea_contig89905.17075.1 vs. uniprot
Match: A0A7S3HK47_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK47_9STRA) HSP 1 Score: 106 bits (265), Expect = 3.330e-27 Identity = 51/72 (70.83%), Postives = 61/72 (84.72%), Query Frame = 1
Query: 1 SFMNGTVEGEEVFIPLDQIIGGRERAGFGWNMLMDCLAEGRGISLPAMSVSASKMTSSIVGAYARIRKQFKV 216
SFMNGTV G++VFIP+ IIGG+ R GFGWNMLMDCLAEGR ISLPA +V A+K + + VGAYAR+RKQF+V
Sbjct: 71 SFMNGTVTGKDVFIPMKSIIGGQTRCGFGWNMLMDCLAEGRSISLPASAVGAAKASLNAVGAYARVRKQFRV 142
BLAST of mRNA_S-dermatodea_contig89905.17075.1 vs. uniprot
Match: W7TNX9_9STRA (Acyl-coenzyme A dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNX9_9STRA) HSP 1 Score: 112 bits (279), Expect = 4.040e-27 Identity = 52/71 (73.24%), Postives = 64/71 (90.14%), Query Frame = 1
Query: 4 FMNGTVEGEEVFIPLDQIIGGRERAGFGWNMLMDCLAEGRGISLPAMSVSASKMTSSIVGAYARIRKQFKV 216
FMNGTVEGE VFIP+D+++GG+ERAG+GWNMLMDCLAEGR ISLPA +++ K++ + VGAYARIRKQFKV
Sbjct: 296 FMNGTVEGENVFIPIDKLLGGQERAGYGWNMLMDCLAEGRAISLPAGAIAIGKLSVTAVGAYARIRKQFKV 366
BLAST of mRNA_S-dermatodea_contig89905.17075.1 vs. uniprot
Match: F0YPJ8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPJ8_AURAN) HSP 1 Score: 103 bits (258), Expect = 9.510e-27 Identity = 46/72 (63.89%), Postives = 62/72 (86.11%), Query Frame = 1
Query: 1 SFMNGTVEGEEVFIPLDQIIGGRERAGFGWNMLMDCLAEGRGISLPAMSVSASKMTSSIVGAYARIRKQFKV 216
+FMNGTV+GE+V++P+D ++GG+ER GFGW+M ++CLAEGRG+SLPAM+V+ K IVGAY+R RKQFKV
Sbjct: 41 AFMNGTVKGEDVWVPMDAVLGGQERCGFGWHMFVECLAEGRGVSLPAMAVALGKGVGPIVGAYSRARKQFKV 112
BLAST of mRNA_S-dermatodea_contig89905.17075.1 vs. uniprot
Match: A0A0L0FQQ7_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FQQ7_9EUKA) HSP 1 Score: 107 bits (267), Expect = 5.370e-26 Identity = 50/72 (69.44%), Postives = 65/72 (90.28%), Query Frame = 1
Query: 1 SFMNGTVEGEEVFIPLDQIIGGRERAGFGWNMLMDCLAEGRGISLPAMSVSASKMTSSIVGAYARIRKQFKV 216
+FMNGTV+G++VFIP+D +IGG+++AGFGWNMLM+CL+EGRGISLPA +VSA ++ VGAYAR+RKQFKV
Sbjct: 283 AFMNGTVKGKDVFIPIDYLIGGQKQAGFGWNMLMECLSEGRGISLPASAVSAGQIACVGVGAYARVRKQFKV 354
BLAST of mRNA_S-dermatodea_contig89905.17075.1 vs. uniprot
Match: A0A7S2P7S4_9STRA (Acyl-coenzyme A dehydrogenase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P7S4_9STRA) HSP 1 Score: 108 bits (270), Expect = 6.250e-26 Identity = 48/72 (66.67%), Postives = 64/72 (88.89%), Query Frame = 1
Query: 1 SFMNGTVEGEEVFIPLDQIIGGRERAGFGWNMLMDCLAEGRGISLPAMSVSASKMTSSIVGAYARIRKQFKV 216
+FMNGTVEGE+V+IP+D I+GG+ER GFGWNM ++CLAEGRG+SLPA S+ A++ ++ VGAYAR+RKQF+V
Sbjct: 315 AFMNGTVEGEDVWIPMDSILGGQERCGFGWNMFVECLAEGRGVSLPAGSIGAARTVTAAVGAYARVRKQFRV 386
BLAST of mRNA_S-dermatodea_contig89905.17075.1 vs. uniprot
Match: K3WID3_GLOUD (Acyl-coenzyme A dehydrogenase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WID3_GLOUD) HSP 1 Score: 107 bits (268), Expect = 1.240e-25 Identity = 49/71 (69.01%), Postives = 64/71 (90.14%), Query Frame = 1
Query: 4 FMNGTVEGEEVFIPLDQIIGGRERAGFGWNMLMDCLAEGRGISLPAMSVSASKMTSSIVGAYARIRKQFKV 216
FMNG V+G++VFIP+D+IIGG+ R G+GWNMLMDCLAEGR ISLPA +V+++K++ + VGAYAR+RKQFKV
Sbjct: 307 FMNGPVQGQDVFIPMDKIIGGQTRVGYGWNMLMDCLAEGRSISLPASAVASAKLSVNAVGAYARVRKQFKV 377 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig89905.17075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig89905.17075.1 >prot_S-dermatodea_contig89905.17075.1 ID=prot_S-dermatodea_contig89905.17075.1|Name=mRNA_S-dermatodea_contig89905.17075.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=70bp MNGTVEGEEVFIPLDQIIGGRERAGFGWNMLMDCLAEGRGISLPAMSVSAback to top mRNA from alignment at S-dermatodea_contig89905:108..323+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig89905.17075.1 ID=mRNA_S-dermatodea_contig89905.17075.1|Name=mRNA_S-dermatodea_contig89905.17075.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=216bp|location=Sequence derived from alignment at S-dermatodea_contig89905:108..323+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig89905:108..323+ >mRNA_S-dermatodea_contig89905.17075.1 ID=mRNA_S-dermatodea_contig89905.17075.1|Name=mRNA_S-dermatodea_contig89905.17075.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=420bp|location=Sequence derived from alignment at S-dermatodea_contig89905:108..323+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |