mRNA_S-dermatodea_contig8964.17048.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8964.17048.1
Unique NamemRNA_S-dermatodea_contig8964.17048.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: D7FXP5_ECTSI (Aldose 1-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP5_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 2.030e-83
Identity = 126/193 (65.28%), Postives = 149/193 (77.20%), Query Frame = 3
Query:    3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVA---TPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDE--TQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPPGLDHCLVVIGTSRDGRA 566
            DGE  S+  NNGP+CLHGGAKGFDK +WRHEVF + DGV GV FEYDSP GE GFPG+LA KVTYSVKRG   GTGELH+ MEA ++  + G +E     TPVNLTNHAYWNLSG  KRSV+ H L +RCDRYLPLDE   ++PTG++ PV GT FDF+E  SLGAAID +G +PPG+D+CLV +GTS  G+A
Sbjct:  143 DGEVISVDANNGPHCLHGGAKGFDKAVWRHEVFHTSDGV-GVKFEYDSPDGEGGFPGALATKVTYSVKRGSERGTGELHTAMEAEYVTDDDGGKEKKRGPTPVNLTNHAYWNLSGDRKRSVRDHELMMRCDRYLPLDEQPVRVPTGEIMPVLGTPFDFTEGASLGAAIDGVGGNPPGVDNCLVRVGTSDGGQA 334          
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A6H5KFI7_9PHAE (Aldose 1-epimerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI7_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 8.590e-83
Identity = 125/193 (64.77%), Postives = 149/193 (77.20%), Query Frame = 3
Query:    3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREV---ATPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDE--TQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPPGLDHCLVVIGTSRDGRA 566
            DGE  S+  NNGP+CLHGGAKGFDK +WRHEVF + DG+ GV FEYDSP GE GFPG+LA KVTYSVKRG   GTGELH+ MEA ++  + G +E     TPVNLTNHAYWNLSG  KRSV+ H L +RCDRYLPLDE   ++PTG++ PV GT FDF++  SLGAAID +G +PPG+D+CLV +GTS  GRA
Sbjct:   94 DGEVISVDANNGPHCLHGGAKGFDKAVWRHEVFHTSDGI-GVRFEYDSPDGEGGFPGALATKVTYSVKRGSERGTGELHTAMEAEYVTDDDGGKEKNRGPTPVNLTNHAYWNLSGDRKRSVRDHELMMRCDRYLPLDEQPVRVPTGEIMPVLGTPFDFTQGASLGAAIDGVGGNPPGVDNCLVRVGTSDGGRA 285          
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A524INA6_9SPIR (Aldose 1-epimerase (Fragment) n=1 Tax=Spirochaetales bacterium TaxID=2026792 RepID=A0A524INA6_9SPIR)

HSP 1 Score: 159 bits (401), Expect = 2.720e-44
Identity = 85/185 (45.95%), Postives = 110/185 (59.46%), Query Frame = 3
Query:    3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPPGLDHCLVVIGTSRD 557
            DG+T ++A NNGPN LHGG  G++KV W+HE   + D + G+ + Y SP GEEG+PG+LAV + + + +     T EL    EA        + +  TPVNLTNHAYWNL G GK  +  H LTL  D YLP+D+  IPTGK+ PV GT  DF  E ++G  I   G    G DHC V+ G   D
Sbjct:   89 DGKTHTLAKNNGPNHLHGGMVGYNKVTWKHEEAETNDSL-GLRYTYLSPDGEEGYPGNLAVSILFRLTK-----TNELIIEYEA--------ETDKPTPVNLTNHAYWNLKGPGKSDIYDHFLTLYADSYLPVDDNLIPTGKIAPVAGTPLDFRMEKAIGRDISAAG----GYDHCFVIRGRDSD 255          
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A1F2TZV1_9BACT (Aldose 1-epimerase n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21 TaxID=1797191 RepID=A0A1F2TZV1_9BACT)

HSP 1 Score: 159 bits (402), Expect = 3.500e-44
Identity = 91/198 (45.96%), Postives = 118/198 (59.60%), Query Frame = 3
Query:    3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPP-----GLDHCLVV--IGTSRDGRAKVV 575
            DG T+ +A NNGPN LHGG KGFDKV+W  E+ ++ DGV GV F   SP GEEG+PGSL V+VTY++         E   ++ A H   +      ATPVNLT H+Y+NL+G G   + GH L++  DRY P+D+T IP G+L PV GT FDF    ++GA ID   +DP      G DH  V+   G      A+VV
Sbjct:   90 DGTTYKLAANNGPNHLHGGNKGFDKVVWAGELLKTADGV-GVAFTRTSPDGEEGYPGSLKVRVTYTLT--------EKDELIVAYHATTDK-----ATPVNLTQHSYFNLAGEGSGDILGHELSIDADRYTPVDDTLIPAGQLAPVQGTPFDFRTPTAIGARIDA--NDPQLTNGKGYDHNWVLNRTGAGLQHAARVV 271          
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A7C2NXH0_9PLAN (Aldose 1-epimerase n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C2NXH0_9PLAN)

HSP 1 Score: 159 bits (401), Expect = 1.500e-43
Identity = 90/194 (46.39%), Postives = 116/194 (59.79%), Query Frame = 3
Query:    3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHAYWNLSGG-GKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPPGLDHCLVVIGTSRDGR--AKVV 575
            DG+ +++A NNGP+ LHGG +GF+K +W+H    + D  AGV F Y SP GEEG+PG+L V+VTY++         EL    EA          + AT +NLTNH YWNLSG  G  ++  H LTL CDRYLP+DE  IPTG+L PV GT  DF     +G  I +  +   G DHC VV GT  + R  AK+V
Sbjct:  146 DGKEYTLAANNGPHHLHGGLEGFNKKVWKHAEVSTAD-AAGVRFTYVSPDGEEGYPGNLTVQVTYTLND-----ANELRIDYEAT--------TDQATVLNLTNHCYWNLSGDQGAGTILDHELTLACDRYLPVDEGSIPTGELAPVAGTPMDFLTPHKIGERIGQTVNGAGGYDHCYVVNGTIGELRPAAKIV 325          
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A7W0MCU0_9PLAN (Aldose 1-epimerase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7W0MCU0_9PLAN)

HSP 1 Score: 157 bits (398), Expect = 2.410e-43
Identity = 90/193 (46.63%), Postives = 112/193 (58.03%), Query Frame = 3
Query:    3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPPGLDHCLVVIGTSRDGR--AKVV 575
            DG+T+S+A NNG N LHGG  GF+  LW+ E   S    A +   Y S  GEEG+PG L  +VTY++         EL    EA            ATP+NLTNHAYWNLSG G  ++  H +TL+CD+YLP+DET IPTG+L+ V GT  DF+    +G  I   G DP G DHC VV G +   R  AKVV
Sbjct:  121 DGKTYSLATNNGANHLHGGKVGFNDRLWKAEPVASSQSPA-LKLTYVSEDGEEGYPGELTSQVTYTLTD-----DNELRIEYEATTT--------AATPINLTNHAYWNLSGEGSGTILDHTVTLQCDKYLPVDETLIPTGELKSVKGTPMDFTSPHKIGERIAETGGDPVGYDHCYVVNGKAGQLRPAAKVV 299          
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A2E7L2L5_9PLAN (Aldose 1-epimerase n=3 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7L2L5_9PLAN)

HSP 1 Score: 158 bits (399), Expect = 3.350e-43
Identity = 84/183 (45.90%), Postives = 111/183 (60.66%), Query Frame = 3
Query:    3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPPGLDHCLVVIGTS 551
            DG+ +++A NN PN LHGG  GFDKV+W     ++ D V GV F Y SP GEEG+PG+L VKV YS+       T +   V++       S   + ATPVNLTNH YWNL+G G   ++ H LT+  D++L +D T IPTG+L  V GT  DFS    +G  +D+I  DP G DHC V+  T+
Sbjct:  154 DGKEYTLATNNDPNHLHGGNVGFDKVVWTATELQTGDAV-GVEFSYRSPDGEEGYPGNLDVKVVYSL-------TNKDEMVVDF------SATTDQATPVNLTNHNYWNLAGAGSGDIRSHELTIAADQFLAVDATLIPTGELRDVKGTPLDFSAAKKIGDDLDKIEADPVGYDHCYVLRETA 322          
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A6L7ZZH0_9PROT (Galactose mutarotase n=2 Tax=Bacteria TaxID=2 RepID=A0A6L7ZZH0_9PROT)

HSP 1 Score: 154 bits (388), Expect = 6.750e-43
Identity = 91/185 (49.19%), Postives = 111/185 (60.00%), Query Frame = 3
Query:    3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPP------GLDHCLVV 539
            DGETF++A NNG N LHGG  GFDKV+W  E F   D   GV+F Y SP GEEG+PG+LAV+VTY++        GEL     A      + DR  ATPVNLT H+Y+NL+G     + GH LT+   RY P+D T IPTG+L PV GT FDF    ++GA ID   DD P      G DH  V+
Sbjct:   91 DGETFALATNNGANHLHGGDVGFDKVVWAGEPFER-DNAVGVVFTYTSPDGEEGYPGTLAVRVTYTLTD-----AGELIFDYHA------TTDR--ATPVNLTQHSYFNLAGTAADDILGHELTIDASRYTPVDTTLIPTGELAPVEGTPFDFLSSRAIGARID---DDHPQLAAGLGYDHNYVL 258          
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A6N8WY58_9BACT (Aldose 1-epimerase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6N8WY58_9BACT)

HSP 1 Score: 154 bits (390), Expect = 2.900e-42
Identity = 91/191 (47.64%), Postives = 113/191 (59.16%), Query Frame = 3
Query:    3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPP------GLDHCLVVIGTSRD 557
            DGETF++A NNGPN LHGG  GFDKV+W  E F   D V GV F Y S  GEEG+PG++ V+VTY++       T     + + R     + DR  ATPVNLT H+Y+NL+GG    + GH LTL   R+ P+D T IPTG+L PV GT FDF    ++GA ID   DD P      G DH  V+ G   D
Sbjct:   92 DGETFTLATNNGPNHLHGGDVGFDKVVWGGEPFEREDAV-GVAFTYTSVDGEEGYPGTMEVRVTYTL-------TDANELIFDYR----ATTDR--ATPVNLTQHSYFNLAGGAAADILGHELTLDASRFTPVDTTLIPTGELAPVEGTPFDFRTATTIGARID---DDHPQLAAGLGYDHNFVLDGDDPD 265          
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A2V8NRX3_9BACT (Aldose 1-epimerase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8NRX3_9BACT)

HSP 1 Score: 154 bits (389), Expect = 2.920e-42
Identity = 84/200 (42.00%), Postives = 120/200 (60.00%), Query Frame = 3
Query:    3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPP-----GLDHCLVVIGTSRDGRAKVVGIRL 587
            DG+T+ +A NNGPN LHGG KGFDKV+W+ E F++ D  AGVIF +DS  G+EG+PG+L  +VTY++         + + ++    +  +      ATPVNLT+H Y+NL+G GKR +  H + +  DRY+P+D T IPTG L  V GT FDF   + +G+ I++   DP      G DH  V+   +R G   V   R+
Sbjct:   89 DGKTYKLATNNGPNHLHGGVKGFDKVVWKAESFKNADS-AGVIFTHDSRDGDEGYPGTLKARVTYALN--------DRNELVIDYLVTTDK-----ATPVNLTHHTYFNLAGEGKRDILDHQMMINADRYIPIDPTSIPTGVLASVEGTPFDFRNPMPIGSRINQ--SDPQLTNGKGYDHTFVL---NRQGEGLVRAARV 269          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXP5_ECTSI2.030e-8365.28Aldose 1-epimerase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5KFI7_9PHAE8.590e-8364.77Aldose 1-epimerase n=1 Tax=Ectocarpus sp. CCAP 131... [more]
A0A524INA6_9SPIR2.720e-4445.95Aldose 1-epimerase (Fragment) n=1 Tax=Spirochaetal... [more]
A0A1F2TZV1_9BACT3.500e-4445.96Aldose 1-epimerase n=1 Tax=Acidobacteria bacterium... [more]
A0A7C2NXH0_9PLAN1.500e-4346.39Aldose 1-epimerase n=1 Tax=Schlesneria paludicola ... [more]
A0A7W0MCU0_9PLAN2.410e-4346.63Aldose 1-epimerase n=1 Tax=Planctomycetaceae bacte... [more]
A0A2E7L2L5_9PLAN3.350e-4345.90Aldose 1-epimerase n=3 Tax=Planctomycetaceae bacte... [more]
A0A6L7ZZH0_9PROT6.750e-4349.19Galactose mutarotase n=2 Tax=Bacteria TaxID=2 RepI... [more]
A0A6N8WY58_9BACT2.900e-4247.64Aldose 1-epimerase n=1 Tax=Gemmatimonadetes bacter... [more]
A0A2V8NRX3_9BACT2.920e-4242.00Aldose 1-epimerase n=1 Tax=Acidobacteria bacterium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8964contigS-dermatodea_contig8964:360..3437 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score250.4
Seed ortholog evalue6.9e-64
Seed eggNOG ortholog2880.D7FXP5
KEGG rclassRC00563
KEGG koko:K01785
KEGG ReactionR01602,R10619
KEGG Pathwayko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130
KEGG ModuleM00632
EggNOG free text desc.aldose 1-epimerase activity
EggNOG OGsCOG2017@1,KOG1604@2759
EC5.1.3.3
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionGalactose mutarotase-like domain
Ec32 orthologEc-28_002510.1
Exons4
Model size590
Cds size570
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8964.17048.1prot_S-dermatodea_contig8964.17048.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8964 380..3437 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925375.398192-UTR-S-dermatodea_contig8964:359..3791622925375.398192-UTR-S-dermatodea_contig8964:359..379Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8964 360..379 +
1694079890.7569091-UTR-S-dermatodea_contig8964:359..3791694079890.7569091-UTR-S-dermatodea_contig8964:359..379Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8964 360..379 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925375.4197497-CDS-S-dermatodea_contig8964:379..4361622925375.4197497-CDS-S-dermatodea_contig8964:379..436Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8964 380..436 +
1694079890.7689154-CDS-S-dermatodea_contig8964:379..4361694079890.7689154-CDS-S-dermatodea_contig8964:379..436Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8964 380..436 +
1622925375.4337695-CDS-S-dermatodea_contig8964:1348..14591622925375.4337695-CDS-S-dermatodea_contig8964:1348..1459Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8964 1349..1459 +
1694079890.777755-CDS-S-dermatodea_contig8964:1348..14591694079890.777755-CDS-S-dermatodea_contig8964:1348..1459Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8964 1349..1459 +
1622925375.4466205-CDS-S-dermatodea_contig8964:1696..19211622925375.4466205-CDS-S-dermatodea_contig8964:1696..1921Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8964 1697..1921 +
1694079890.7973988-CDS-S-dermatodea_contig8964:1696..19211694079890.7973988-CDS-S-dermatodea_contig8964:1696..1921Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8964 1697..1921 +
1622925375.4589076-CDS-S-dermatodea_contig8964:3260..34371622925375.4589076-CDS-S-dermatodea_contig8964:3260..3437Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8964 3261..3437 +
1694079890.80802-CDS-S-dermatodea_contig8964:3260..34371694079890.80802-CDS-S-dermatodea_contig8964:3260..3437Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8964 3261..3437 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8964.17048.1

>prot_S-dermatodea_contig8964.17048.1 ID=prot_S-dermatodea_contig8964.17048.1|Name=mRNA_S-dermatodea_contig8964.17048.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=190bp
MAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFP
GSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHA
YWNLSGGGKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEE
LSLGAAIDRIGDDPPGLDHCLVVIGTSRDGRAKVVGIRL*
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mRNA from alignment at S-dermatodea_contig8964:360..3437+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8964.17048.1 ID=mRNA_S-dermatodea_contig8964.17048.1|Name=mRNA_S-dermatodea_contig8964.17048.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3078bp|location=Sequence derived from alignment at S-dermatodea_contig8964:360..3437+ (Saccorhiza dermatodea SderLu1190fm monoicous)
TTGATGGCGAGACGTTTTCGATGGCACCGAACAACGGGCCGAACTGCCTG CACGGAGGAGCCAAGGGGTTCGATAAGGCGAGCACCTTTTACCCAGTTGT TCGTTTGTGTGAGCGGTGCTATGTACCCAGTGATGGATACGTACTGTTAG CGTGGAGTATCCTACGTGCTTGATGGAGGGTGGTATATTCCATATGGTTG GGTGTGGCCAGAGCAGGTGGCGGTTACATACCCGATCTGATACTTCGGGC CATTGGTTTGTATTCTGGGTTATTTCTCTCGGGATATTTGTGTTACGTAC CTGTACTCACTCCTTCCCGAGACCCAGCAGCAATCGCAGATCTCTACCTC CTTTTTCATATTTGATTCGCTCCTGAGCCGTTTCCTGCCGATATACCATC TGCAGAACCATCCATCATTATCGGTTCTGGGAGAGCTCCATCGATCACTT GCGTTTTACTGTTTTGTGCTCCGCGTCATTATCATACTGTAGCGGGACTG CGTCTCCGCATCTTTTTATCCGTCATATGCCTACCTACCCCGTCGCGCAT GTTCTTGGGAACCAAGACAAAGACATGGAGTGCTCCCGGGTTTGTGTTGT GCGTTTAGGACTCCGACGAAACGCACACACCATTGCGCTTGATAACCGTA AGAGCTTCGTGTATGACTGGCGACAGAGACAATCGTTGTAATGTTCGGCG CAGAAACCGCAACAAGTCCACCCGCGGTGAGCGCTCCGCGCGGAAGTAGC AAATCCGGTTGCAGCAGCAGTTTCGCGCCGTGCTTCAACAACCCGCGCCC CCCCCCGCACGTCCTTTGTGGGAGTTTCCCTCCCGACATGTGCAGTGTGT ATGCATGGTGGCCCACGCAGATCGTTTTGGGGCTCTTCTGCTTCCGGAGC CAGGGCAGAATGTATCTAAGCCGGCAAAGAGGGGGGTCTGATGCAATCAT TTTGTCTGCCTTTGTGGAAAATGAATCGTCGTGGTGCAGGTATTGTGGCG GCACGAGGTTTTCCGCAGCATAGACGGCGTCGCCGGCGTTATTTTCGAGT ACGACAGTCCAGCCGGCGAGGAGGGATTTCCCGGTTCCTTGGCCGTCAAG GTATATGCTCCGGGAGGCAACGCGCGGGGAACAGCAGCACCCGCGGTGGA ACCATGTTGCGCCTCCGAGATTATCACAATGCAAACCCCCGAGTTTTCTT GTAGAACCAATGGAAACGTGTCCGTGAGATTTTTCATATTTGGTGATTGC TTCTGCGGACGAGATTCGTCAGTGGTAAAAACAAACCTTGCAAAGAAAAG CCAAGCGCAGTCATTTCTCAAACTCTACCCCTACCAGGTGACCTACTCCG TCAAACGAGGATTGCGGCCTGGGACAGGGGAGTTGCACTCGGTCATGGAA GCCAGGCATATCCCCGCGGAAAGCGGGGACCGGGAGGTGGCCACCCCAGT AAACCTTACGAATCACGCGTATTGGAACCTTAGCGGAGGAGGCAAGCGAT CGGTAAAAGGCCACAACCTCACGCTGAGATGCGACCGTTATCTCCCCCTC GACGAAACCCAGGCGAGTGGCTCAAAGGGAGAAACCCGTACTTGTATTCT AGCTATGCATGATTTCAGTGCGGGTGCGCGTTGCTCATGTCTTGCGCGGC TCGACAACGGTGTGGGGTCGGCAGAAGATAGAGTGGATGAGGGCTTGGGT GGGGGACGGACCGGGGGGTGGCCGAGCCCCCTATGATGCCCGTCTCATAA ACTCTTACGGGGAGGTACACAGTGATCAGGAGCGAATTTCTGCTCGATGG CGTATTGACATCTTACCAGTACGTTTTAAGCGGAACACCTTGTAATGTAT ATTTTTCATGGTTTCTGTTTGTTTCTACATTGCAGGCCGGAAGAGTGCTG ATGTCGCAAGGCTAGACCGTAGTCATGTCTGATTTGTTATGTTGGGTACA CGGCTTTGGGGCATTATATCCTATCTACGGAGTACCTCCGTAGTAGGAGC GATTTCCTGCCCACGCTCCGCGGTGATTGTGAGTCGGTGGTGGCAGGACC CCAGTCACCGCAGGGCCGTGGGTTCGATTCCCACGTGAAGAGATTGCTGT TGCTTCCGCCCCAATCCCGTAGTGGAAATTTCGAGAGTCAAAAGGTAAGT AAACGCCGACGATAATCGGCGAGCTGTGGGACTTGGCCGACCACGATGGG GCCGGAGAGAAATGGGTTGGTCCCCTTCGTCCGTGGGCTTTCCAAGTATC TGGGGTTGTCCTATTCGAAATATATTATTTGAACAAGTATGGCAATGAAG GCGCCGTTCCATTTCAACACGGCATCAGTTCACTCGGTACCCCGTATGTG ACCTTATGGGGCCGAACCATCTCGCGAGCTTATGGGCATCGACGCTTTGC AGGCCAGGAAAGACGCTTCACAGTCTGGTCGCGCCGTATCTGGGTTTCAA AGGTTCAAGCATGCAGCGAACACTCGCAAGGGGCCTTCGCAACATTGCGT AGCCGCACAATTTATATTCCCCGACGAGCACAACACGCTGCTGAGGTCGG CCATAGAATGCAGATCATGCCGCCGCTGCGTGGCCGAGCCCTGTGTTCAA CACTATTACGAAGGACCATAGTTAACAAGTAAAACAGTTGCCACAAGTCT CAGCCTAGCAAATCAAAAATAGGCTGGATTTACCCAGATTTCATGGTCGA AGTTCTTGTACTGGGCCATACCTCGTGTTTTCTTTCTTCACGAGATTTTT GTTGTTGTTGGGTATTCATGTTGAGAATAGTAGGGTATTCATGGTCGTGA TATTTGGTCCTGATCACTCTGTTCCTCCGTAATAGCGCAATGTCGTTCCT GCACTCTCGGGCTCCTTGCTTGCTTTCCCATCCGCCGCGACGGCCCACCA GATTCCGACCGGGAAGCTCGAGCCTGTTTTCGGGACGTTCTTCGATTTCT CTGAGGAACTTTCTCTAGGAGCCGCGATCGACAGAATTGGTGATGATCCG CCGGGCTTAGACCACTGTCTAGTAGTCATCGGTACTTCGAGAGACGGGCG CGCCAAGGTAGTAGGCATTAGGTTGTAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig8964:360..3437+

>mRNA_S-dermatodea_contig8964.17048.1 ID=mRNA_S-dermatodea_contig8964.17048.1|Name=mRNA_S-dermatodea_contig8964.17048.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1140bp|location=Sequence derived from alignment at S-dermatodea_contig8964:360..3437+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGCACCGAACAACGGGCCGAACTGCCTGCACGGAGGAGCCAAGGGGTT
CGATAAGATGGCACCGAACAACGGGCCGAACTGCCTGCACGGAGGAGCCA
AGGGGTTCGATAAGGTATTGTGGCGGCACGAGGTTTTCCGCAGCATAGAC
GGCGTCGCCGGCGTTATTTTCGAGTACGACAGTCCAGCCGGCGAGGAGGG
ATTTCCCGGTTCCTTGGCCGTCAAGGTATTGTGGCGGCACGAGGTTTTCC
GCAGCATAGACGGCGTCGCCGGCGTTATTTTCGAGTACGACAGTCCAGCC
GGCGAGGAGGGATTTCCCGGTTCCTTGGCCGTCAAGGTGACCTACTCCGT
CAAACGAGGATTGCGGCCTGGGACAGGGGAGTTGCACTCGGTCATGGAAG
CCAGGCATATCCCCGCGGAAAGCGGGGACCGGGAGGTGGCCACCCCAGTA
AACCTTACGAATCACGCGTATTGGAACCTTAGCGGAGGAGGCAAGCGATC
GGTAAAAGGCCACAACCTCACGCTGAGATGCGACCGTTATCTCCCCCTCG
ACGAAACCCAGGTGACCTACTCCGTCAAACGAGGATTGCGGCCTGGGACA
GGGGAGTTGCACTCGGTCATGGAAGCCAGGCATATCCCCGCGGAAAGCGG
GGACCGGGAGGTGGCCACCCCAGTAAACCTTACGAATCACGCGTATTGGA
ACCTTAGCGGAGGAGGCAAGCGATCGGTAAAAGGCCACAACCTCACGCTG
AGATGCGACCGTTATCTCCCCCTCGACGAAACCCAGATTCCGACCGGGAA
GCTCGAGCCTGTTTTCGGGACGTTCTTCGATTTCTCTGAGGAACTTTCTC
TAGGAGCCGCGATCGACAGAATTGGTGATGATCCGCCGGGCTTAGACCAC
TGTCTAGTAGTCATCGGTACTTCGAGAGACGGGCGCGCCAAGGTAGTAGG
CATTAGGTTGTAGATTCCGACCGGGAAGCTCGAGCCTGTTTTCGGGACGT
TCTTCGATTTCTCTGAGGAACTTTCTCTAGGAGCCGCGATCGACAGAATT
GGTGATGATCCGCCGGGCTTAGACCACTGTCTAGTAGTCATCGGTACTTC
GAGAGACGGGCGCGCCAAGGTAGTAGGCATTAGGTTGTAG
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