mRNA_S-dermatodea_contig8964.17048.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: D7FXP5_ECTSI (Aldose 1-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP5_ECTSI) HSP 1 Score: 259 bits (662), Expect = 2.030e-83 Identity = 126/193 (65.28%), Postives = 149/193 (77.20%), Query Frame = 3
Query: 3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVA---TPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDE--TQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPPGLDHCLVVIGTSRDGRA 566
DGE S+ NNGP+CLHGGAKGFDK +WRHEVF + DGV GV FEYDSP GE GFPG+LA KVTYSVKRG GTGELH+ MEA ++ + G +E TPVNLTNHAYWNLSG KRSV+ H L +RCDRYLPLDE ++PTG++ PV GT FDF+E SLGAAID +G +PPG+D+CLV +GTS G+A
Sbjct: 143 DGEVISVDANNGPHCLHGGAKGFDKAVWRHEVFHTSDGV-GVKFEYDSPDGEGGFPGALATKVTYSVKRGSERGTGELHTAMEAEYVTDDDGGKEKKRGPTPVNLTNHAYWNLSGDRKRSVRDHELMMRCDRYLPLDEQPVRVPTGEIMPVLGTPFDFTEGASLGAAIDGVGGNPPGVDNCLVRVGTSDGGQA 334
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A6H5KFI7_9PHAE (Aldose 1-epimerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI7_9PHAE) HSP 1 Score: 259 bits (662), Expect = 8.590e-83 Identity = 125/193 (64.77%), Postives = 149/193 (77.20%), Query Frame = 3
Query: 3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREV---ATPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDE--TQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPPGLDHCLVVIGTSRDGRA 566
DGE S+ NNGP+CLHGGAKGFDK +WRHEVF + DG+ GV FEYDSP GE GFPG+LA KVTYSVKRG GTGELH+ MEA ++ + G +E TPVNLTNHAYWNLSG KRSV+ H L +RCDRYLPLDE ++PTG++ PV GT FDF++ SLGAAID +G +PPG+D+CLV +GTS GRA
Sbjct: 94 DGEVISVDANNGPHCLHGGAKGFDKAVWRHEVFHTSDGI-GVRFEYDSPDGEGGFPGALATKVTYSVKRGSERGTGELHTAMEAEYVTDDDGGKEKNRGPTPVNLTNHAYWNLSGDRKRSVRDHELMMRCDRYLPLDEQPVRVPTGEIMPVLGTPFDFTQGASLGAAIDGVGGNPPGVDNCLVRVGTSDGGRA 285
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A524INA6_9SPIR (Aldose 1-epimerase (Fragment) n=1 Tax=Spirochaetales bacterium TaxID=2026792 RepID=A0A524INA6_9SPIR) HSP 1 Score: 159 bits (401), Expect = 2.720e-44 Identity = 85/185 (45.95%), Postives = 110/185 (59.46%), Query Frame = 3
Query: 3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPPGLDHCLVVIGTSRD 557
DG+T ++A NNGPN LHGG G++KV W+HE + D + G+ + Y SP GEEG+PG+LAV + + + + T EL EA + + TPVNLTNHAYWNL G GK + H LTL D YLP+D+ IPTGK+ PV GT DF E ++G I G G DHC V+ G D
Sbjct: 89 DGKTHTLAKNNGPNHLHGGMVGYNKVTWKHEEAETNDSL-GLRYTYLSPDGEEGYPGNLAVSILFRLTK-----TNELIIEYEA--------ETDKPTPVNLTNHAYWNLKGPGKSDIYDHFLTLYADSYLPVDDNLIPTGKIAPVAGTPLDFRMEKAIGRDISAAG----GYDHCFVIRGRDSD 255
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A1F2TZV1_9BACT (Aldose 1-epimerase n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21 TaxID=1797191 RepID=A0A1F2TZV1_9BACT) HSP 1 Score: 159 bits (402), Expect = 3.500e-44 Identity = 91/198 (45.96%), Postives = 118/198 (59.60%), Query Frame = 3
Query: 3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPP-----GLDHCLVV--IGTSRDGRAKVV 575
DG T+ +A NNGPN LHGG KGFDKV+W E+ ++ DGV GV F SP GEEG+PGSL V+VTY++ E ++ A H + ATPVNLT H+Y+NL+G G + GH L++ DRY P+D+T IP G+L PV GT FDF ++GA ID +DP G DH V+ G A+VV
Sbjct: 90 DGTTYKLAANNGPNHLHGGNKGFDKVVWAGELLKTADGV-GVAFTRTSPDGEEGYPGSLKVRVTYTLT--------EKDELIVAYHATTDK-----ATPVNLTQHSYFNLAGEGSGDILGHELSIDADRYTPVDDTLIPAGQLAPVQGTPFDFRTPTAIGARIDA--NDPQLTNGKGYDHNWVLNRTGAGLQHAARVV 271
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A7C2NXH0_9PLAN (Aldose 1-epimerase n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C2NXH0_9PLAN) HSP 1 Score: 159 bits (401), Expect = 1.500e-43 Identity = 90/194 (46.39%), Postives = 116/194 (59.79%), Query Frame = 3
Query: 3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHAYWNLSGG-GKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPPGLDHCLVVIGTSRDGR--AKVV 575
DG+ +++A NNGP+ LHGG +GF+K +W+H + D AGV F Y SP GEEG+PG+L V+VTY++ EL EA + AT +NLTNH YWNLSG G ++ H LTL CDRYLP+DE IPTG+L PV GT DF +G I + + G DHC VV GT + R AK+V
Sbjct: 146 DGKEYTLAANNGPHHLHGGLEGFNKKVWKHAEVSTAD-AAGVRFTYVSPDGEEGYPGNLTVQVTYTLND-----ANELRIDYEAT--------TDQATVLNLTNHCYWNLSGDQGAGTILDHELTLACDRYLPVDEGSIPTGELAPVAGTPMDFLTPHKIGERIGQTVNGAGGYDHCYVVNGTIGELRPAAKIV 325
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A7W0MCU0_9PLAN (Aldose 1-epimerase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7W0MCU0_9PLAN) HSP 1 Score: 157 bits (398), Expect = 2.410e-43 Identity = 90/193 (46.63%), Postives = 112/193 (58.03%), Query Frame = 3
Query: 3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPPGLDHCLVVIGTSRDGR--AKVV 575
DG+T+S+A NNG N LHGG GF+ LW+ E S A + Y S GEEG+PG L +VTY++ EL EA ATP+NLTNHAYWNLSG G ++ H +TL+CD+YLP+DET IPTG+L+ V GT DF+ +G I G DP G DHC VV G + R AKVV
Sbjct: 121 DGKTYSLATNNGANHLHGGKVGFNDRLWKAEPVASSQSPA-LKLTYVSEDGEEGYPGELTSQVTYTLTD-----DNELRIEYEATTT--------AATPINLTNHAYWNLSGEGSGTILDHTVTLQCDKYLPVDETLIPTGELKSVKGTPMDFTSPHKIGERIAETGGDPVGYDHCYVVNGKAGQLRPAAKVV 299
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A2E7L2L5_9PLAN (Aldose 1-epimerase n=3 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7L2L5_9PLAN) HSP 1 Score: 158 bits (399), Expect = 3.350e-43 Identity = 84/183 (45.90%), Postives = 111/183 (60.66%), Query Frame = 3
Query: 3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPPGLDHCLVVIGTS 551
DG+ +++A NN PN LHGG GFDKV+W ++ D V GV F Y SP GEEG+PG+L VKV YS+ T + V++ S + ATPVNLTNH YWNL+G G ++ H LT+ D++L +D T IPTG+L V GT DFS +G +D+I DP G DHC V+ T+
Sbjct: 154 DGKEYTLATNNDPNHLHGGNVGFDKVVWTATELQTGDAV-GVEFSYRSPDGEEGYPGNLDVKVVYSL-------TNKDEMVVDF------SATTDQATPVNLTNHNYWNLAGAGSGDIRSHELTIAADQFLAVDATLIPTGELRDVKGTPLDFSAAKKIGDDLDKIEADPVGYDHCYVLRETA 322
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A6L7ZZH0_9PROT (Galactose mutarotase n=2 Tax=Bacteria TaxID=2 RepID=A0A6L7ZZH0_9PROT) HSP 1 Score: 154 bits (388), Expect = 6.750e-43 Identity = 91/185 (49.19%), Postives = 111/185 (60.00%), Query Frame = 3
Query: 3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPP------GLDHCLVV 539
DGETF++A NNG N LHGG GFDKV+W E F D GV+F Y SP GEEG+PG+LAV+VTY++ GEL A + DR ATPVNLT H+Y+NL+G + GH LT+ RY P+D T IPTG+L PV GT FDF ++GA ID DD P G DH V+
Sbjct: 91 DGETFALATNNGANHLHGGDVGFDKVVWAGEPFER-DNAVGVVFTYTSPDGEEGYPGTLAVRVTYTLTD-----AGELIFDYHA------TTDR--ATPVNLTQHSYFNLAGTAADDILGHELTIDASRYTPVDTTLIPTGELAPVEGTPFDFLSSRAIGARID---DDHPQLAAGLGYDHNYVL 258
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A6N8WY58_9BACT (Aldose 1-epimerase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6N8WY58_9BACT) HSP 1 Score: 154 bits (390), Expect = 2.900e-42 Identity = 91/191 (47.64%), Postives = 113/191 (59.16%), Query Frame = 3
Query: 3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPP------GLDHCLVVIGTSRD 557
DGETF++A NNGPN LHGG GFDKV+W E F D V GV F Y S GEEG+PG++ V+VTY++ T + + R + DR ATPVNLT H+Y+NL+GG + GH LTL R+ P+D T IPTG+L PV GT FDF ++GA ID DD P G DH V+ G D
Sbjct: 92 DGETFTLATNNGPNHLHGGDVGFDKVVWGGEPFEREDAV-GVAFTYTSVDGEEGYPGTMEVRVTYTL-------TDANELIFDYR----ATTDR--ATPVNLTQHSYFNLAGGAAADILGHELTLDASRFTPVDTTLIPTGELAPVEGTPFDFRTATTIGARID---DDHPQLAAGLGYDHNFVLDGDDPD 265
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Match: A0A2V8NRX3_9BACT (Aldose 1-epimerase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8NRX3_9BACT) HSP 1 Score: 154 bits (389), Expect = 2.920e-42 Identity = 84/200 (42.00%), Postives = 120/200 (60.00%), Query Frame = 3
Query: 3 DGETFSMAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPGSLAVKVTYSVKRGLRPGTGELHSVMEARHIPAESGDREVATPVNLTNHAYWNLSGGGKRSVKGHNLTLRCDRYLPLDETQIPTGKLEPVFGTFFDFSEELSLGAAIDRIGDDPP-----GLDHCLVVIGTSRDGRAKVVGIRL 587
DG+T+ +A NNGPN LHGG KGFDKV+W+ E F++ D AGVIF +DS G+EG+PG+L +VTY++ + + ++ + + ATPVNLT+H Y+NL+G GKR + H + + DRY+P+D T IPTG L V GT FDF + +G+ I++ DP G DH V+ +R G V R+
Sbjct: 89 DGKTYKLATNNGPNHLHGGVKGFDKVVWKAESFKNADS-AGVIFTHDSRDGDEGYPGTLKARVTYALN--------DRNELVIDYLVTTDK-----ATPVNLTHHTYFNLAGEGKRDILDHQMMINADRYIPIDPTSIPTGVLASVEGTPFDFRNPMPIGSRINQ--SDPQLTNGKGYDHTFVL---NRQGEGLVRAARV 269 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8964.17048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8964.17048.1 >prot_S-dermatodea_contig8964.17048.1 ID=prot_S-dermatodea_contig8964.17048.1|Name=mRNA_S-dermatodea_contig8964.17048.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=190bp MAPNNGPNCLHGGAKGFDKVLWRHEVFRSIDGVAGVIFEYDSPAGEEGFPback to top mRNA from alignment at S-dermatodea_contig8964:360..3437+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8964.17048.1 ID=mRNA_S-dermatodea_contig8964.17048.1|Name=mRNA_S-dermatodea_contig8964.17048.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3078bp|location=Sequence derived from alignment at S-dermatodea_contig8964:360..3437+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8964:360..3437+ >mRNA_S-dermatodea_contig8964.17048.1 ID=mRNA_S-dermatodea_contig8964.17048.1|Name=mRNA_S-dermatodea_contig8964.17048.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1140bp|location=Sequence derived from alignment at S-dermatodea_contig8964:360..3437+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |