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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 1180 |
| Cds size | 1179 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8948.17031.1 >prot_S-dermatodea_contig8948.17031.1 ID=prot_S-dermatodea_contig8948.17031.1|Name=mRNA_S-dermatodea_contig8948.17031.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=393bp
EGDALDPLAHLRGGGRKGGLKGAADDSDDEERPKKPLTKKEKRRLEEEQR
RREKEEAAGGDSSDADEEDDRDVDKDDDAASVTETRPGDEGGAKTSKASK
KDKKGKKGKKGRGDDSDEEVDAEEGGAQKKPPTKKERRRLDEQERIQREL
ESEQAAAEAESAAGDGNEKGEAGKESGDDQSKEEPPSTGRPDPSSKKSKK
GKKKGMKGRDNDDDSEDDGKGGGNAEDALSRGMESLSVDAGAPAPPAKMS
KKERKRAEAAALAAAADEEEEKEETDEEGDDGEAAAAAAAEAAEEAAAAK
AEEEARLEREAAAEKVAKKETKAKGKKEGDGNSDEDDGQKRRMSKKERKK
AKQGGGKKKETEEQAPEPPTDTPAAPAVNPDDKESSAPAPPPP back to topmRNA from alignment at S-dermatodea_contig8948:2725..8740+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig8948.17031.1 ID=mRNA_S-dermatodea_contig8948.17031.1|Name=mRNA_S-dermatodea_contig8948.17031.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6016bp|location=Sequence derived from alignment at S-dermatodea_contig8948:2725..8740+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GAGGGCGATGCGCTTGACCCTTTGGCGCACCTCCGGGGTGGGGGTCGCAA
GGGCGGCCTGAAGGGCGCAGCGGACGATTCGGACGACGAGGAGAGGCCTA
AGAAGCCTCTCACCAAGAAGGAGAAGCGGAGGCTAGAGGAGGAGCAGCGC
CGCCGAGAGAAGGAGGAGGTGATGCTTCGGGTTGGTTTGGCGTGCCGGCG
CTTATGTAGCTTGATGGGTGTGTGGTGCGGGTTTGAATGAGGGTGTGCAT
GTGATGTTCGGCGAAGATGATGATGGATGGATGGAATGGTGCTTGCGGCA
GAGGAAGGAAGGTCATGCAATGCCTGTGACCTGTGGCTTGTGCTCTCTGC
CGGTCTGCTGCCAGGCTTCATTGCGCAGGCCGGTTGACCCTCCTCGAGTT
TGCATCGTTACTGCACTGTGCTTGGGGTCGATGCGTTGGGCCCTTTAGGA
TTCATCTATTGTAGCGTGCACGATAAAAGCTAAAGCAATCATACCTACGC
GAACTTGCGGTGTCATGTTCCTACAATGCAGTGCTCAGGGTGCATGTACA
GGCAGCAAGCAGTACAGCATGATACACGCACGTGCGCCAGCTCGGTGCGA
ACCTCCCGCTGACTGCTTGCTGTGCTGGCCTTCTTGAAACCGAGAGTGAC
CAGAGGCGGCGAACGCTTGCTGACCGCGCCTCATGCAGTTCGCGGACCCG
GTCCCCCATCAGCACAAAAAGGCAGCGGCATTTTTGCTTATTGCTGCCGG
TATTCCCCGCGAGGAGCTATCGTTGCATGTATGATGTACAGTACCCACTC
TTTCCTAGTGTGCGTATTTTATGCGCAAGGACGCAGTCGGTACGTACATG
GACAGATTCGAACGGATGTCGTCTACATATCGTACCACGTCCTACGTTTA
GAACTAGAGCTATGGCTCTATGAATACGAAGCTTTTAAACCTGTACGCAG
CCGTCAAGCGTAAAAGCGTCGTGCCTGTAGCTTCGAAAGTATGCGTTAAA
CTGTGCTTTCACGAGGGACGCGTGCCGCGCTACTTGTAGTATGTACCAGT
TCTACGCTAGCTGCCGGGTTAGGCGAAACTCTGTACCGAAAGACGCCTCT
CGTTGTCCACTCACCACAAGACCTACACTCTGATCAGTGGTGTCCATCCA
GTACAAACTGGCAACTCGCGAGTGATTATGATACCACTTCAGAAGGTGCC
GAAATGCCAGTTCTTCAGTTTGTACGGAGTTGTGCTATCTTATTAATTAA
TACACCTTGATCACCAATGTAGATACGTGTGTCCAGGCGGACACCAGTGT
CCGTGGGACGAAGTCCCGAGGCGTGGTTTCTTTCTTTGGTCTTGGTAGCG
AGGAGACTCGCTGGGTTTGTTTGGTCTTGTAGTCCGTGAGGTGGACCAAG
CCTTGATGCTCCATTATTGATCCTGGTCCTGTCGGTAGTTGATGCTCCGT
CGGTAGTGGAAACCCGCAGGATGGATGTGTAGGACGGGGACAGATATGGG
TCTAGGAAACGTGTTCTCCACACAACAAGGAACTATTTTTAATAGCGATT
TAGATAACGATTTTGAGGCCGAATTTTTCAGGGAATTTTTAGGCCGATTT
CGTATACTAACCTTCTGTACGATTTTTTATTTTTAGGTGCGGTCGCTCAC
CTCAGGGGCGTAGCCGTGGCTACCTATTAATACTGACATTAATAGCACTT
TTTACCGTATGATGTTACGGTAACACGGAACTCGCATGGTTCGTATGATA
TCATAGCACGGCACTGTTGCACTACAATATGCCGCAAAAGAAACTTCAAT
CAGGACGCTTGGAGAACGAAGCGCACCACGGTGCTTCATCCCCAGCACCG
CTATATCACTGGCATCGCTTCGCACAAGCAGCGCCTGCCTCACAAACGCT
GTGTCATAAAAGCTTCGCGTCTCATTCCGCAGCACCTCCCAACCTACGCC
CACCGCTGCACTCATCGCTGTTCGCGGCCCTACGCCATCGTTCGCTCCAG
GCGGCAGGGGGAGACTCCTCTGATGCAGACGAAGAGGATGATCGCGATGT
CGACAAGGACGATGACGCCGCAAGCGTTACAGAAACGAGACCCGGGGACG
AGGGGGGTGCTAAGACCTCGAAGGCATCCAAGAAGGACAAGAAGGGCAAG
AAGGTGCGCCGTTTGTCGATTGGTTGGTTGGAAGCTGCGCCGCGAGGAGA
GAGTGGGTGCGCGGGGATGGTCCTGTAAGTGTCGTCAATCTTTGGTTTGC
GTTGCTGTCAACGGTTTGGGGGTTTGGGGCACTCTGGTGAAGGCGATCAG
GTATTCGTTGCCGTCGTCCTCTCAGGTATTGTTTATGCAAGCTAATTTTG
CGGGTCTTGGTGCGACTCTCGATTATCGCGATTCCACGGTGGACGCACAA
TGGGTTAAAAGAGGAGTAGGAGAACCACAAAGAGCGCAGGCGGCGGTTAA
CGAGGGGGCACTATTAATAGTATAGTTTACTGTTGGCCGCCAACGTTTTT
TTACCGTGCGTGTTGTTCGCGGCGACGGCTTTAGTCTTCCCGCCGCCTGC
AAACCGCTGCGTGCCCTGTCGGCATCCCGCGAGCAACTTCTCTCTGTGCG
TCGCGATGCGCCATGTCGCGTGGCTCTGCCAGGGCAAGAAGGGCAGGGGT
GACGACAGCGACGAGGAGGTCGATGCCGAGGAAGGCGGCGCCCAGAAGAA
ACCCCCCACGAAAAAGGAGCGCCGGAGACTGGACGAGCAGGAGCGGATTC
AGCGGGAGCTCGAGGTGACGTTGCGTTCTCCTGCTGCACATATACGAGGC
GCTTACAAGCGGCTGCGTATCTACGTGTTATTGTCACCGTTCATGCTTGC
TGTCACTCTCGGTGTGTACTGTAGATCGCTTGAATGCTGAGCCACAGGAT
CGAGCAACACGTCTCATCGTGTGTCCCGTCCGCTGCCGCTTTGATCTTCA
GTCTGAACAGGCGGCGGCGGAAGCAGAGAGCGCGGCGGGCGACGGCAACG
AAAAGGGAGAGGCCGGGAAAGAATCAGGGGATGACCAGAGCAAGGAAGAA
CCGCCCTCGACGGGGCGTCCGGACCCTTCTTCGAAGAAGTCCAAGAAGGG
AAAAAAGAAGGTGGGCGGTTTCGTGGGGATTTTTTGTATCTATTTTTGTA
CACATACTAATATTGGTATAATAGACCGACTTTTCCTAGGTCCGTCTGTG
GTCACAAGGGATCATCCCATCTCTCTTATCCCCGGCTTTTACCTTAGGTT
GTTGTTCGCGCATTGGGTTCGGCACTCCCGCAGCTCGCCGATCTATCGGA
TTTTGCGGAATGCGCTGGGTTGTTTCTCCGCGGGAACTCCGTACAAGTGC
AGAGTCTTAGTTTTTCTTTGGCTAGTTTCGGCGTTTCGCTGGAAGGCGGG
ACTGCGGGGGCGATTTTCGTGTGAAGGAAGGACGGACGGTCGAAGGGAAG
CGGAGTTGGTGAAAATCGCGCTTTGGACGGAAGCGCTGAGTAGTTCAGGA
GGAGAGGCAAACACACACGCACGGCTAGAGGCGAATGGAGAGAACAGAAT
GGCAAAACAATACATGTACAAGTATATATACAGTATATATGTTGTATCGG
CACCCGCTTCTGTCGACTCGCACCGATCGCGTGTGTGCGTACACCAGCCA
TTTTTTTTCCCGCTCCACACCATGCTCCGACCGACCATGCCGCACCAGCC
CACCACGCCGTCCTGCACCGGGGCGTACTGTACTGCATCATCTCCATCGT
GCTATCGGCTGTCCGTCAGTCTTGTTGTTTCGTCATGCCCTTCCAGCGCT
CACAACGCCGTAACCCCCCCCCCCATCCGGTACCCCCATGTGCAACTCCT
CTGAAGGGCATGAAGGGGCGCGACAACGACGACGACAGCGAAGACGATGG
TAAGGGTGGCGGTAACGCCGAGGATGCACTCAGTCGGGGGATGGAGTCAC
TGTCGGTTGACGCGGGCGCCCCGGCACCCCCCGCGAAGATGTCTAAGAAG
GAGCGGAAAAGAGCGGAGGCCGCCGCCCTAGCCGCTGCGGCTGACGAAGA
GGAGGAGAAGGAGGAGACGGACGAGGAAGGGGATGATGGAGAGGCGGCTG
CGGCTGCGGCAGCGGAGGCCGCCGAGGAAGCGGCCGCAGCTAAGGCTGAA
GAAGAGGCGAGGCTTGAGAGGGAGGCGGCTGCGGAGAAAGTTGCGAAAAA
AGAGACTAAGGCCAAGGGGAAGAAGGAGGGCGATGGTAACAGCGACGAGG
ACGATGGGCAGAAGAGGCGCATGTCTAAGAAGGAGCGGAAGAAGGCCAAG
CAGGTGGGGGTGGTTGGGGGGGTCCTTGCTGTCGCACGCGTCCGTCGCGC
TTTTCGGTTCGGTTGGCTGGAAGTGATGGTGGGGGGGGCTAGTTCTTGGA
AGATTTTGTGGTTTTCGGGGAGAACCGGGGTTTGTTGGATATTGGTCGAG
AGCGCGTGTGACAATGCTGCCGAGAGATTGTCGCAGCTCGTTCGCCCGTG
CGTGAATTGTGATACGGACGTGGTTGCGAGACGGGGCTGGTTTGTGCGTT
GGTTCTGCTTTGGCGTCGCTGCCGCCTGGGAAAATTATGCCTCAGAAGGC
TGCAAGGCGTCATCAGAAGGCTGTAAGACTTGACACGGGCTGCTTCGAGA
ATGTTGGGCCATGCTGACTGTACTGTTTGGCGCATTTGGTCCTGACGTTT
GCTTGATTATAGCGTACCTCTGTAATATCAATAGGATATATTAGTATTTA
ATATCAACAGGATATATTAGTATTTGGGCAAGGTAAGCTATAATCAGGAC
CAAATCTTGCGACCATGAATACAATACCCAACTGTTCCGACCATGAATGC
CCATACAAAACCAAAAATCTCACGGAGAACAAAAGCACGAGGTGTGGCCG
TATACAACAACAACAACAACACCGACCGTGAAATCTCGATATTTGATATT
TCCAGCCCTGTTTGGTTTTTTCTGAGTTGAGGCTCGTGGCAAATTTTGGA
CCTGTTGACCCTTTTGGTATATACTAGCCCCTAATACTGTTTGGAGCGCC
GGTTAGCACGTAATGAGGCGTGCTTGAAGCGGGGCCATGGGGAAGCGCAT
GGGTTATGACGCAGGAATGAGAGAGAACGGAACCTAAGGGAAACGGGGCT
GTAGCTGTCGACTGGCATCGAGAGAGTTTTTGGTCGTTTCAGAGAGCCCT
ATTAGTACTAATTTAAATACTACAAAACTTAATGGTACCCAAAAGGTTAA
AGTTAACTATAGTCCTCCGCAACAGTGTGACGCTGCAATAAAGAACATGA
AGCGTCGCTGCACCCCAAGAAGCCGCTGAGCGTTGCTATGTATCCGTACA
GAACCAGGGAGGCAAACTCGCGTCCCGCATCAAGCTATAATAGCTCTCCG
GCTGCACTTGTCGTGTTTAAGTCTCTCGTGCGTGCTGTCACACGAATCCA
ACACGATTTATGTCACCAAAACGTGAGGCCAAACAACTTGATTGTGGAGT
TGAGCGACCACGCACGCCTCACAGGCGTAGCACACTGTAGACTTGTGGTG
TGTATTGAAAATTCGCGAATTGTGGCTGGACAGAAAACAAACACGCTCCG
AAAGCAGACCGCAAACCCTCCCCGCTGGACGCACATCCCACTTCGAAGCT
CTGTTCGATGCTCAAGGATTACGGTGATGATGATGATGATGATGATGATG
ATGATGATCTCACATGAGCTGATCTCAAAACCCAGCTTTCCGCGGCCGCT
AGTAATATCAATAGTCAGATAGATCAACGAAATCAAGAAATAACACTATT
ATATCATACAATACAATAAACAAACTTCAGCAATGTTTTTGTCCGCTGTC
GTGTTTTTGTTCCTGCTGTCGTTTTTTTTTTTTTTTTTTTTTTAGGGGGG
AGGCAAGAAAAAAGAAACCGAGGAACAAGCACCGGAGCCGCCGACGGACA
CTCCGGCTGCCCCCGCCGTCAACCCTGACGACAAGGAGAGCTCGGCTCCT
GCTCCACCGCCCCCGC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig8948:2725..8740+ >mRNA_S-dermatodea_contig8948.17031.1 ID=mRNA_S-dermatodea_contig8948.17031.1|Name=mRNA_S-dermatodea_contig8948.17031.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2358bp|location=Sequence derived from alignment at S-dermatodea_contig8948:2725..8740+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GAGGGCGATGCGCTTGACCCTTTGGCGCACCTCCGGGGTGGGGGTCGCAA
GGGCGGCCTGAAGGGCGCAGCGGACGATTCGGACGACGAGGAGAGGCCTA
AGAAGCCTCTCACCAAGAAGGAGAAGCGGAGGCTAGAGGAGGAGCAGCGC
CGCCGAGAGAAGGAGGAGGAGGGCGATGCGCTTGACCCTTTGGCGCACCT
CCGGGGTGGGGGTCGCAAGGGCGGCCTGAAGGGCGCAGCGGACGATTCGG
ACGACGAGGAGAGGCCTAAGAAGCCTCTCACCAAGAAGGAGAAGCGGAGG
CTAGAGGAGGAGCAGCGCCGCCGAGAGAAGGAGGAGGCGGCAGGGGGAGA
CTCCTCTGATGCAGACGAAGAGGATGATCGCGATGTCGACAAGGACGATG
ACGCCGCAAGCGTTACAGAAACGAGACCCGGGGACGAGGGGGGTGCTAAG
ACCTCGAAGGCATCCAAGAAGGACAAGAAGGGCAAGAAGGCGGCAGGGGG
AGACTCCTCTGATGCAGACGAAGAGGATGATCGCGATGTCGACAAGGACG
ATGACGCCGCAAGCGTTACAGAAACGAGACCCGGGGACGAGGGGGGTGCT
AAGACCTCGAAGGCATCCAAGAAGGACAAGAAGGGCAAGAAGGGCAAGAA
GGGCAGGGGTGACGACAGCGACGAGGAGGTCGATGCCGAGGAAGGCGGCG
CCCAGAAGAAACCCCCCACGAAAAAGGAGCGCCGGAGACTGGACGAGCAG
GAGCGGATTCAGCGGGAGCTCGAGGGCAAGAAGGGCAGGGGTGACGACAG
CGACGAGGAGGTCGATGCCGAGGAAGGCGGCGCCCAGAAGAAACCCCCCA
CGAAAAAGGAGCGCCGGAGACTGGACGAGCAGGAGCGGATTCAGCGGGAG
CTCGAGTCTGAACAGGCGGCGGCGGAAGCAGAGAGCGCGGCGGGCGACGG
CAACGAAAAGGGAGAGGCCGGGAAAGAATCAGGGGATGACCAGAGCAAGG
AAGAACCGCCCTCGACGGGGCGTCCGGACCCTTCTTCGAAGAAGTCCAAG
AAGGGAAAAAAGAAGTCTGAACAGGCGGCGGCGGAAGCAGAGAGCGCGGC
GGGCGACGGCAACGAAAAGGGAGAGGCCGGGAAAGAATCAGGGGATGACC
AGAGCAAGGAAGAACCGCCCTCGACGGGGCGTCCGGACCCTTCTTCGAAG
AAGTCCAAGAAGGGAAAAAAGAAGGGCATGAAGGGGCGCGACAACGACGA
CGACAGCGAAGACGATGGTAAGGGTGGCGGTAACGCCGAGGATGCACTCA
GTCGGGGGATGGAGTCACTGTCGGTTGACGCGGGCGCCCCGGCACCCCCC
GCGAAGATGTCTAAGAAGGAGCGGAAAAGAGCGGAGGCCGCCGCCCTAGC
CGCTGCGGCTGACGAAGAGGAGGAGAAGGAGGAGACGGACGAGGAAGGGG
ATGATGGAGAGGCGGCTGCGGCTGCGGCAGCGGAGGCCGCCGAGGAAGCG
GCCGCAGCTAAGGCTGAAGAAGAGGCGAGGCTTGAGAGGGAGGCGGCTGC
GGAGAAAGTTGCGAAAAAAGAGACTAAGGCCAAGGGGAAGAAGGAGGGCG
ATGGTAACAGCGACGAGGACGATGGGCAGAAGAGGCGCATGTCTAAGAAG
GAGCGGAAGAAGGCCAAGCAGGGCATGAAGGGGCGCGACAACGACGACGA
CAGCGAAGACGATGGTAAGGGTGGCGGTAACGCCGAGGATGCACTCAGTC
GGGGGATGGAGTCACTGTCGGTTGACGCGGGCGCCCCGGCACCCCCCGCG
AAGATGTCTAAGAAGGAGCGGAAAAGAGCGGAGGCCGCCGCCCTAGCCGC
TGCGGCTGACGAAGAGGAGGAGAAGGAGGAGACGGACGAGGAAGGGGATG
ATGGAGAGGCGGCTGCGGCTGCGGCAGCGGAGGCCGCCGAGGAAGCGGCC
GCAGCTAAGGCTGAAGAAGAGGCGAGGCTTGAGAGGGAGGCGGCTGCGGA
GAAAGTTGCGAAAAAAGAGACTAAGGCCAAGGGGAAGAAGGAGGGCGATG
GTAACAGCGACGAGGACGATGGGCAGAAGAGGCGCATGTCTAAGAAGGAG
CGGAAGAAGGCCAAGCAGGGGGGAGGCAAGAAAAAAGAAACCGAGGAACA
AGCACCGGAGCCGCCGACGGACACTCCGGCTGCCCCCGCCGTCAACCCTG
ACGACAAGGAGAGCTCGGCTCCTGCTCCACCGCCCCCGGGGGGAGGCAAG
AAAAAAGAAACCGAGGAACAAGCACCGGAGCCGCCGACGGACACTCCGGC
TGCCCCCGCCGTCAACCCTGACGACAAGGAGAGCTCGGCTCCTGCTCCAC
CGCCCCCG back to top
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