mRNA_S-dermatodea_contig8930.17021.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig8930.17021.1 vs. uniprot
Match: D8LH94_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH94_ECTSI) HSP 1 Score: 169 bits (429), Expect = 3.330e-47 Identity = 80/87 (91.95%), Postives = 83/87 (95.40%), Query Frame = 1
Query: 1 YKRYRLSDGKDFSSLFFPEKENLLRVLQHFEEKSGKYAIKGYPHKLGLLLHGPPGTGKTSMIKALACHTGRNVVNVPLARIKTNQVL 261
YKRYRLSDGKDF SLFFPEK+ LLR+LQHFE+KSGKYAIKGYPHKLGLLLHGPPGTGKTSMIKALACHTGRNVVNVPL RIKTNQ L
Sbjct: 250 YKRYRLSDGKDFDSLFFPEKDALLRILQHFEDKSGKYAIKGYPHKLGLLLHGPPGTGKTSMIKALACHTGRNVVNVPLGRIKTNQEL 336
BLAST of mRNA_S-dermatodea_contig8930.17021.1 vs. uniprot
Match: D7FQ71_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ71_ECTSI) HSP 1 Score: 144 bits (363), Expect = 1.860e-39 Identity = 66/89 (74.16%), Postives = 76/89 (85.39%), Query Frame = 1
Query: 1 YKRYRLSDGKDFSSLFFPEKENLLRVLQHFEEKSGKYAIKGYPHKLGLLLHGPPGTGKTSMIKALACHTGRNVVNVPLARIKTNQVLHN 267
YKRY+L D KDF SLFFPEKE LLR L++FE K G+YAI+GYPHKLG LLHGPPGTGKTS+IKALAC TGR+++ VPL RIKTN+ L N
Sbjct: 49 YKRYKLGDVKDFDSLFFPEKEQLLRALENFEAKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTGRHIIQVPLGRIKTNEDLMN 137
BLAST of mRNA_S-dermatodea_contig8930.17021.1 vs. uniprot
Match: A0A6H5K675_9PHAE (ATPase_AAA_core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K675_9PHAE) HSP 1 Score: 141 bits (355), Expect = 3.980e-39 Identity = 65/87 (74.71%), Postives = 75/87 (86.21%), Query Frame = 1
Query: 1 YKRYRLSDGKDFSSLFFPEKENLLRVLQHFEEKSGKYAIKGYPHKLGLLLHGPPGTGKTSMIKALACHTGRNVVNVPLARIKTNQVL 261
YKRY+L D KDF SLFFPEKE LLRVL++FE K G+YAI+GYPHKLG LLHGPPGTGKTS+IKALAC T R+++ VPL RIKTN+ L
Sbjct: 26 YKRYKLGDVKDFDSLFFPEKEKLLRVLENFEAKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTRRHIIQVPLGRIKTNEDL 112
BLAST of mRNA_S-dermatodea_contig8930.17021.1 vs. uniprot
Match: A0A6H5K8D9_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D9_9PHAE) HSP 1 Score: 147 bits (371), Expect = 4.200e-39 Identity = 68/89 (76.40%), Postives = 77/89 (86.52%), Query Frame = 1
Query: 1 YKRYRLSDGKDFSSLFFPEKENLLRVLQHFEEKSGKYAIKGYPHKLGLLLHGPPGTGKTSMIKALACHTGRNVVNVPLARIKTNQVLHN 267
YKRYRL D KDF SLFFPEKE LLRVL++FE K G+YAI+GYPHKLGLLLHGPPGTGKTS+IKALAC TGR+++ VPL R+ TNQ L N
Sbjct: 323 YKRYRLGDVKDFDSLFFPEKEQLLRVLENFEAKRGRYAIRGYPHKLGLLLHGPPGTGKTSLIKALACRTGRHIIQVPLGRVNTNQDLMN 411
BLAST of mRNA_S-dermatodea_contig8930.17021.1 vs. uniprot
Match: A0A812US84_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812US84_SYMMI) HSP 1 Score: 140 bits (354), Expect = 1.890e-38 Identity = 65/87 (74.71%), Postives = 79/87 (90.80%), Query Frame = 1
Query: 1 YKRYRLSDGKDFSSLFFPEKENLLRVLQHFEEKSGKYAIKGYPHKLGLLLHGPPGTGKTSMIKALACHTGRNVVNVPLARIKTNQVL 261
YKRY+LSD K F+ LFF EK+ LL++L HF++KSGKYAI+G+PHKLGLLLHGPPGTGKTS+IKA+A HTGRNVV++PLARI+TNQ L
Sbjct: 205 YKRYKLSDEKSFACLFFREKQMLLKLLSHFKDKSGKYAIQGFPHKLGLLLHGPPGTGKTSLIKAMAQHTGRNVVSIPLARIETNQEL 291
BLAST of mRNA_S-dermatodea_contig8930.17021.1 vs. uniprot
Match: D7FQ72_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ72_ECTSI) HSP 1 Score: 144 bits (363), Expect = 2.690e-38 Identity = 66/89 (74.16%), Postives = 76/89 (85.39%), Query Frame = 1
Query: 1 YKRYRLSDGKDFSSLFFPEKENLLRVLQHFEEKSGKYAIKGYPHKLGLLLHGPPGTGKTSMIKALACHTGRNVVNVPLARIKTNQVLHN 267
YKRY+L D KDF SLFFPEKE LLR L++FE K G+YAI+GYPHKLG LLHGPPGTGKTS+IKALAC TGR+++ VPL RIKTN+ L N
Sbjct: 261 YKRYKLGDVKDFDSLFFPEKEQLLRALENFEAKRGRYAIRGYPHKLGFLLHGPPGTGKTSLIKALACRTGRHIIQVPLGRIKTNEDLMN 349
BLAST of mRNA_S-dermatodea_contig8930.17021.1 vs. uniprot
Match: A0A7S4EVE5_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EVE5_CHRCT) HSP 1 Score: 142 bits (357), Expect = 3.380e-38 Identity = 63/87 (72.41%), Postives = 78/87 (89.66%), Query Frame = 1
Query: 1 YKRYRLSDGKDFSSLFFPEKENLLRVLQHFEEKSGKYAIKGYPHKLGLLLHGPPGTGKTSMIKALACHTGRNVVNVPLARIKTNQVL 261
YKRY+LSD K F SLFFPEKE++L++L F++K+GKY ++GYPHKLGLLLHGPPGTGKTS+IKALA HTGR+++N+PLARI TNQ L
Sbjct: 67 YKRYKLSDQKTFKSLFFPEKESILKLLSDFQQKAGKYGVEGYPHKLGLLLHGPPGTGKTSLIKALAQHTGRSIINIPLARINTNQQL 153
BLAST of mRNA_S-dermatodea_contig8930.17021.1 vs. uniprot
Match: A0A7S4B551_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B551_CHRCT) HSP 1 Score: 142 bits (357), Expect = 2.160e-37 Identity = 63/87 (72.41%), Postives = 78/87 (89.66%), Query Frame = 1
Query: 1 YKRYRLSDGKDFSSLFFPEKENLLRVLQHFEEKSGKYAIKGYPHKLGLLLHGPPGTGKTSMIKALACHTGRNVVNVPLARIKTNQVL 261
YKRY+LSD K F SLFFPEKE++L++L F++K+GKY ++GYPHKLGLLLHGPPGTGKTS+IKALA HTGR+++N+PLARI TNQ L
Sbjct: 267 YKRYKLSDQKTFKSLFFPEKESILKLLSDFQQKAGKYGVEGYPHKLGLLLHGPPGTGKTSLIKALAQHTGRSIINIPLARINTNQQL 353
BLAST of mRNA_S-dermatodea_contig8930.17021.1 vs. uniprot
Match: A0A7S2HPD5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HPD5_9STRA) HSP 1 Score: 139 bits (351), Expect = 5.860e-37 Identity = 66/87 (75.86%), Postives = 77/87 (88.51%), Query Frame = 1
Query: 1 YKRYRLSDGKDFSSLFFPEKENLLRVLQHFEEKSGKYAIKGYPHKLGLLLHGPPGTGKTSMIKALACHTGRNVVNVPLARIKTNQVL 261
YKRY+LSD K F SLFF EK++L+ VL HF++K+GKYAIKGYPHKLGLLLHGPPGTGKTS+IKALA HT R+++NVPLARI TNQ L
Sbjct: 257 YKRYKLSDEKCFQSLFFDEKDSLINVLGHFQKKTGKYAIKGYPHKLGLLLHGPPGTGKTSLIKALAQHTQRSIINVPLARIGTNQEL 343
BLAST of mRNA_S-dermatodea_contig8930.17021.1 vs. uniprot
Match: A0A0M0J9R9_9EUKA (Bcs1 aaa-type n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J9R9_9EUKA) HSP 1 Score: 140 bits (354), Expect = 7.880e-37 Identity = 67/87 (77.01%), Postives = 77/87 (88.51%), Query Frame = 1
Query: 1 YKRYRLSDGKDFSSLFFPEKENLLRVLQHFEEKSGKYAIKGYPHKLGLLLHGPPGTGKTSMIKALACHTGRNVVNVPLARIKTNQVL 261
+KRY+LSD K FSSLFF +KE LL VL+HF K+GKYA++GYPHKLGLLLHGPPGTGKTSMIKALA +TGR++VNVPLARI TNQ L
Sbjct: 234 FKRYKLSDEKQFSSLFFDDKEKLLAVLKHFTGKTGKYAVQGYPHKLGLLLHGPPGTGKTSMIKALAQYTGRSIVNVPLARISTNQEL 320 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8930.17021.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8930.17021.1 >prot_S-dermatodea_contig8930.17021.1 ID=prot_S-dermatodea_contig8930.17021.1|Name=mRNA_S-dermatodea_contig8930.17021.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=97bp YKRYRLSDGKDFSSLFFPEKENLLRVLQHFEEKSGKYAIKGYPHKLGLLLback to top mRNA from alignment at S-dermatodea_contig8930:8027..8846+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8930.17021.1 ID=mRNA_S-dermatodea_contig8930.17021.1|Name=mRNA_S-dermatodea_contig8930.17021.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=820bp|location=Sequence derived from alignment at S-dermatodea_contig8930:8027..8846+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8930:8027..8846+ >mRNA_S-dermatodea_contig8930.17021.1 ID=mRNA_S-dermatodea_contig8930.17021.1|Name=mRNA_S-dermatodea_contig8930.17021.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=582bp|location=Sequence derived from alignment at S-dermatodea_contig8930:8027..8846+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |