mRNA_S-dermatodea_contig8925.17016.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8925.17016.1
Unique NamemRNA_S-dermatodea_contig8925.17016.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig8925.17016.1 vs. uniprot
Match: A0A6H5KUQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ0_9PHAE)

HSP 1 Score: 520 bits (1340), Expect = 1.560e-178
Identity = 247/321 (76.95%), Postives = 285/321 (88.79%), Query Frame = 1 
Query:    1 VYDFTGPVLGSGAFATVLRVRDRMSGVEYAIKQVDLTGIKDDPSTMNMLYNEIKGMKMLSHPNIVRLQEVYEPKDEEMLYMVLDRLEGGSVDALRKQEGHIEEDHAGYIMAQVVDAVRYCHDFNIAHRDLKLANCMFEDNSPAPIIKVIDFGLCTELKDGQTSSAFVGTMTYAAPEVVTKNKGHGIECDMWSIGVMTYVLIGGRFPFYADDRGALGHQIKFMAHSYKDAVWKGVSALCRDFIDKCLNKNPKTRTTAKQAQHHPWIKKAAKAMEGAPLSKGAMMSMMKFQETNLFEKIAMELVAYSYEPSQIKDLERHFREV 963
            +YDFTGPVLGSGAFATVLRVRD MSGVEYA+KQ+DL+GIKDDPSTM MLYNEIKGMK L+HPNIVRLQEVY+PKDE+M+Y+VLDRL GGSV+ALR+Q+GH+EE+ A YI+AQVVDAVRYCH  NI HRDLKLANCMFED S +PI+K+IDFGLC ELK+G+TSSAFVGTMTYA+PE+V KNK HGIECD+WS+GVM Y L+GGR PF A+D  AL HQIK+   SY D  WKGVSALCRDFIDKCL+K PK R TAKQAQ HPWI+KAAK MEGAPLSK +M++++ FQ+TNLFEK+A+ELVAYSYEPSQIKDLE  FRE+
Sbjct:   44 MYDFTGPVLGSGAFATVLRVRDHMSGVEYAVKQIDLSGIKDDPSTMRMLYNEIKGMKALNHPNIVRLQEVYQPKDEDMMYLVLDRLSGGSVEALRRQKGHLEENFAAYIVAQVVDAVRYCHSLNIVHRDLKLANCMFEDESASPIVKIIDFGLCKELKNGETSSAFVGTMTYASPEMVMKNKRHGIECDVWSVGVMAYALVGGRLPFNAEDPAALQHQIKYSQQSYADETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIRKAAKQMEGAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFREM 364
[Close]
BLAST of mRNA_S-dermatodea_contig8925.17016.1 vs. uniprot
Match: D7G562_ECTSI (Protein kinase domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G562_ECTSI)

HSP 1 Score: 412 bits (1060), Expect = 1.410e-135
Identity = 198/318 (62.26%), Postives = 245/318 (77.04%), Query Frame = 1 
Query:    4 YDFTGPVLGSGAFATVLRVRDRMSGVEYAIKQVDLTGIKDDPSTMNMLYNEIKGMKMLSHPNIVRLQEVYEPKDEEMLYMVLDRLEGGSVDALRKQEGHIEEDHAGYIMAQVVDAVRYCHDFNIAHRDLKLANCMFEDNSPAPIIKVIDFGLCTELKDGQTSSAFVGTMTYAAPEVVTKNKGHGIECDMWSIGVMTYVLIGGRFPFYADDRGALGHQIKFMAHSYKDAVWKGVSALCRDFIDKCLNKNPKTRTTAKQAQHHPWIKKAAKAMEG-APLSKGAMMSMMKFQETNLFEKIAMELVAYSYEPSQIKDLERHF 954
            YDFTGPVLG G+FATVLRVRDR+SG EYA+KQ+DL  IKD PS++ M+  E + M  LSHPNIVRLQEVY P   + LYMVLDRLEGGSVD L ++ G + +DHA +I+ Q+V AVRYCHD  IAHRDLK+ NC++ED+S  PI+KVIDFGLC E+KDG TS AFVGT+ Y APE++ K  GH + CD+WS+GVM + L+ G+FP+Y+D +   G  IK+    +    WKGVS LCRDFI+KCL K PK R TA QAQ HPW++KAA+ MEG APLSK +MM+M+++Q  N F+KI MELVAYSYEP+QIKDLE  F
Sbjct:   95 YDFTGPVLGKGSFATVLRVRDRVSGSEYAVKQIDLHAIKDSPSSLRMIERECRTMMTLSHPNIVRLQEVYRPPSADRLYMVLDRLEGGSVDGLWRRVGQLSDDHAAHIILQIVSAVRYCHDRGIAHRDLKMENCLYEDSSLVPIVKVIDFGLCAEMKDGVTSRAFVGTVLYTAPEIL-KVDGHNVACDLWSLGVMAFALVSGQFPWYSDSKDVCGQMIKYSPLQFPKEKWKGVSPLCRDFIEKCLVKKPKKRITAAQAQQHPWLQKAARLMEGGAPLSKESMMAMLEYQNGNTFQKIVMELVAYSYEPAQIKDLELDF 411
[Close]
BLAST of mRNA_S-dermatodea_contig8925.17016.1 vs. uniprot
Match: A0A835YS30_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS30_9STRA)

HSP 1 Score: 300 bits (767), Expect = 4.670e-93
Identity = 152/330 (46.06%), Postives = 213/330 (64.55%), Query Frame = 1 
Query:    1 VYDFTGPVLGSGAFATVLRVRDRMSGVEYAIKQVDLTGIKDDPSTMNMLYNEIKGMKMLSHPNIVRLQEVYEPKDEEMLYMVLDRLEGGSVDALRKQEGHIEEDHAGYIMAQVVDAVRYCHDFNIAHRDLKLANCMFEDNSPAPIIKVIDFGLCTELKDG-QTSSAFVGTMTYAAPEVVTKNKGHGIECDMWSIGVMTYVLIGGRFPFYADDRGALGHQIKFMAHSYKDAVWKGVSALCRDFIDKCLNKNPKTRTTAKQAQHHPWIK-----------KAAKAMEGAPLSKGAMMSMMKFQETNLFEKIAMELVAYSYEPSQIKDLERHF 954
            VYDF+GPVLG G +A+V+ V+ + +G  YA+KQ+D+T   +    +++L NEI+ MK L HPNIVRLQEVY+  D + +Y+++DRLEGG+V     +   +EEDHA YI + VV A+RYCHD N+ HRDLK+ N +FE   P  I+K+IDFGL  +       +   VGT  Y+APE++ KN GHG+ CDMWSIGV+ + L+G  FPF+  D   L  +IK+  + +    W GVS LC+DFID+CL KNPK R TA QAQ HPW++           KA    +G   ++     M +FQ+ NLF+K+AME++AY  +P + + L R F
Sbjct:   54 VYDFSGPVLGKGGYASVMMVKHKTTGALYAMKQIDITDFSE--LALHLLQNEIESMKHLVHPNIVRLQEVYQTVDLKHVYLIMDRLEGGTVREKWAELDGLEEDHAAYIASGVVAAIRYCHDRNVVHRDLKMDNVLFESKRPDSIVKIIDFGLSEKFGSCVDKAHDLVGTRLYSAPEIL-KNAGHGLPCDMWSIGVIVFALVGNAFPFFDRDPDILASEIKYARYKFAGPAWDGVSPLCKDFIDRCLVKNPKKRMTAPQAQEHPWLRGGTAWANAIRGKAGGGCDGRMKAR-TRRCMGEFQDNNLFKKVAMEVIAYILDPEETESLAREF 379
[Close]
BLAST of mRNA_S-dermatodea_contig8925.17016.1 vs. uniprot
Match: D7FPG2_ECTSI (Calcium-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPG2_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 1.480e-64
Identity = 104/145 (71.72%), Postives = 121/145 (83.45%), Query Frame = 1 
Query:  529 VVTKNKGHGIECDMWSIGVMTYVLIGGRFPFYADDRGALGHQIKFMAHSYKDAVWKGVSALCRDFIDKCLNKNPKTRTTAKQAQHHPWIKKAAKAMEGAPLSKGAMMSMMKFQETNLFEKIAMELVAYSYEPSQIKDLERHFREV 963
            +V KNK HGIECD+WS+GVMTY L+GGR PF A+D  AL HQIK+   SY D  WKGVSALCRDFIDKCL+K PK R TAKQAQ HPWI+KA K MEGAPLSK +M++++ FQ+TNLFEK+A+ELVAYSYEPSQIKDLE  FRE+
Sbjct:    1 MVMKNKRHGIECDVWSVGVMTYALVGGRLPFNAEDPAALQHQIKYSQQSYADETWKGVSALCRDFIDKCLHKLPKKRMTAKQAQLHPWIRKATKEMEGAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFREM 145
[Close]
BLAST of mRNA_S-dermatodea_contig8925.17016.1 vs. uniprot
Match: A0A6H5KFV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFV6_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 7.820e-64
Identity = 127/322 (39.44%), Postives = 190/322 (59.01%), Query Frame = 1 
Query:    1 VYDF-TGPVLGSGAFATVLRVRDRMSGVEYAIKQVDLTGIKDDPSTMNMLYNEIKGMKMLSHPNIVRLQEVYEPKDEEMLYMVLDRLEGGSVDALRKQEGHIEEDHAGYIMAQVVDAVRYCHDFNIAHRDLKLANCMFEDNSPAPIIKVIDFGLCTELKDGQTSSAFVGTMTYAAPEVVTKNKGHGIECDMWSIGVMTYVLIGGRFPFYADDRGALGHQIKFMAHSYKDAVWKGVSALCRDFIDKCLNKNPKTRTTAKQAQHHPWIKKAAKAMEGAPLSKGAMMSMMKFQETNLFEKIAMELVAYSYEPSQIKDLERHFREV 963
            VYD  +G +LG G F TV  V  + +  +YA+K ++L  + +       L NEI+ MK L HPNI R+QEV+   D    YMV+D   GG + A  K      ED    I+ ++++A+RYCHD NIAHRD+KL N  FE  +    +K++DFGL    KD Q     VG+  + APEV+ +   H   CD+WS+GV+TY L+ G  PF + +   L  QI +   ++++  WK VS+  +DFI K L K+P+ R TA+QAQHHPW+ KA      A LS   + ++M F+  NL +++A+ +VA + E S++++LE+ F + 
Sbjct:   44 VYDLRSGELLGKGGFGTVRVVTHKATQNKYALKTIELKDV-ETVEQYEFLLNEIEIMKQLDHPNIARVQEVFHTPDH--YYMVMDLYTGGDMYARYKFRS---EDETAKIVNKLINALRYCHDRNIAHRDIKLENICFESMADDAEVKLVDFGLSASFKDEQMRHDLVGSWAFMAPEVLQRAH-HPQACDLWSMGVITYCLLAGFPPFRSVNLKGLKEQILYSKVTFEEEPWKNVSSYAKDFIQKLLKKDPQKRLTAQQAQHHPWLTKARSTKNNAKLSPKVVENLMHFKNLNLMKRVALGVVARTLEASEMRNLEQEFHKA 358
[Close]
BLAST of mRNA_S-dermatodea_contig8925.17016.1 vs. uniprot
Match: D8LG93_ECTSI (Calcium-dependent protein kinase 2 (PfCDPK2) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG93_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 1.900e-62
Identity = 125/322 (38.82%), Postives = 188/322 (58.39%), Query Frame = 1 
Query:    1 VYDFT-GPVLGSGAFATVLRVRDRMSGVEYAIKQVDLTGIKDDPSTMNMLYNEIKGMKMLSHPNIVRLQEVYEPKDEEMLYMVLDRLEGGSVDALRKQEGHIEEDHAGYIMAQVVDAVRYCHDFNIAHRDLKLANCMFEDNSPAPIIKVIDFGLCTELKDGQTSSAFVGTMTYAAPEVVTKNKGHGIECDMWSIGVMTYVLIGGRFPFYADDRGALGHQIKFMAHSYKDAVWKGVSALCRDFIDKCLNKNPKTRTTAKQAQHHPWIKKAAKAMEGAPLSKGAMMSMMKFQETNLFEKIAMELVAYSYEPSQIKDLERHFREV 963
            VYD   G +LG G F TV  V  + +  ++A+K V+L+ +KD+ S +N  + E++ M+ L HPNI RL  VY     E L+MV+D  EGG    L        E +A  I+ +V +AVRY HD NIAHRDLKL N + ++      +K++DFGL    KD Q     VGT  Y APEV++ +      CDMWSIGV+ Y+L+ G  PF       L  QI+   + +    W  +S   ++FI + L +NP+ R +A +AQHHPW+     + + + LSK A+ +++ F++TN  +K+A+ELVA S +  QI++LE+ F ++
Sbjct:   81 VYDMNEGSLLGKGGFGTVQTVVHKETRKKFALKAVELSRVKDEKS-LNFFFREVEVMRQLDHPNICRLHAVY--PTVEHLFMVMDLCEGGD---LLTTYHFKSERNAANIVLRVTNAVRYMHDRNIAHRDLKLDNILTDETKEGADVKLVDFGLSAHFKDFQLEHDVVGTWVYMAPEVISGSH-FPRTCDMWSIGVIAYLLLCGYPPFGGSSTAELKEQIQHGTYQFHHEAWSDISGKAKNFIKRLLVRNPQERMSAAEAQHHPWLNNHDPSGKDSKLSKAAVQNLVNFRQTNALKKLALELVARSLDIEQIRNLEKDFAKM 395
[Close]
BLAST of mRNA_S-dermatodea_contig8925.17016.1 vs. uniprot
Match: A0A835ZF12_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF12_9STRA)

HSP 1 Score: 223 bits (567), Expect = 9.880e-62
Identity = 123/307 (40.07%), Postives = 179/307 (58.31%), Query Frame = 1 
Query:   34 GAFATVLRVRDRMSGVEYAIKQVDLTGIKDDPSTMNMLYNEIKGMKMLSHPNIVRLQEVYEPKDEEMLYMVLDRLEGGSVDALRKQEGHIEEDHAGYIMAQVVDAVRYCHDFNIAHRDLKLANCMFEDNSPAPIIKVIDFGLCTELKDGQTSSAFVGTMTYAAPEVVTKNKGHGIECDMWSIGVMTYVLIGGRFPFYADDRGALGHQIKFMAHSYKDAVWKGVSALCRDFIDKCLNKNPKTRTTAKQAQHHPWIKKAAKAMEGAPLSKGAMMSMMKFQETNLFEKIAMELVAYSYEPSQIKDLERHF 954
            G F  V  V  + +G ++A+K V+L  ++D  S  +    E+  MK L HPNIVRLQEV+   D   L++V+D   GG+   L +      E  A  I+  +V+A+RYCHD  IAHRDLKL N ++E N P   +K++DFGL     + Q     VGT  Y APEV+  +      CDMWSIGV+ Y+L+ G  PF  + R  L  QI+   + + D+ W+ ++ L + FI + L +NP+ R TA +AQHHPWI   AK +  APLS     +++KFQ   L +K+A++ VA + E  Q+++LER F
Sbjct:  466 GGFGKVQIVTRKATGKDFALKTVELDRVRDKKS-FDFFMKEVDIMKNLDHPNIVRLQEVFHTPD--YLFLVMDLCTGGN---LLQSYKFKTERAAADIVRNIVNAIRYCHDRGIAHRDLKLDNIVYEHNGPDAEVKLVDFGLSCHYTEAQLEHDVVGTWIYMAPEVIGGSH-FPTACDMWSIGVIAYLLLCGYPPFSGETRDKLKWQIRHGTYKFHDSAWRHITPLAKSFITRLLVRNPQERMTAAEAQHHPWISTCAKELADAPLSAEVAANILKFQNAKLLKKLALKTVARAMEDDQVRELEREF 765
[Close]
BLAST of mRNA_S-dermatodea_contig8925.17016.1 vs. uniprot
Match: W7T4K4_9STRA (Calcium-dependent protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4K4_9STRA)

HSP 1 Score: 208 bits (530), Expect = 4.540e-59
Identity = 128/324 (39.51%), Postives = 185/324 (57.10%), Query Frame = 1 
Query:    1 VYDF-TGPVLGSGAFATVLRVRDRMSGVEYAIKQVDLTGIKDDPSTMNMLYNEIKGMKMLSHPNIVRLQEVYEPKDEEMLYMVLDRLEGGSV-DALRKQEGH-IEEDHAGYIMAQVVDAVRYCHDFNIAHRDLKLANCMFEDNSPAPIIKVIDFGLCTELKDGQTSSAFVGTMTYAAPEVVTKNKGHGIECDMWSIGVMTYVLIGGRFPFYADDRGALGHQIKFMAHSYKDAVWKGVSALCRDFIDKCLNKNPKTRTTAKQAQHHPWIKKAAKAMEGAPLSKGAMMSMMKFQETNLFEKIAMELVAYSYEPSQIKDLERHFREV 963
            VYD   G +LG+G    V  VR   +G  YA+K + L  +K   S  + L NE++ M  L HPNIV+L E +E  D   ++++++   GG + D L +QEGH   E  A  ++ ++V A+RYCHD +IAHRDLKL N +FE+      +K+IDFGL    +D Q     VGT  Y  P V+  +  +  ECDMWSIGV+ Y+L+ GR PFY D       +++    S+  + +  VSA  +DFI + L  +   R TA+QAQ HPW+    ++ E  PL    + S+  F E +  +K+AME+VA+S    QIKDL R F +V
Sbjct:   49 VYDVGKGKILGTGISGMVRVVRHLTTGNTYAMKTLHLNRLKSKASLAD-LRNEVRIMSELDHPNIVQLYETFETDDH--IFLIMELCTGGELLDKLHRQEGHHYSEQIASQLVKKMVGAIRYCHDHHIAHRDLKLENFLFENEGADAELKLIDFGLSRHYRDDQRMHRPVGTPYYVDPSVLEGS--YTQECDMWSIGVIAYMLLSGRPPFYGDTDNETLIRVRAGKFSFPPSAFHQVSAQAKDFISRLLVVDHTRRMTARQAQAHPWLHSWDQSPE--PLHVDILGSLRNFHEFSTLKKVAMEVVAFSLRSEQIKDLRREFEKV 365
[Close]
BLAST of mRNA_S-dermatodea_contig8925.17016.1 vs. uniprot
Match: C5LM50_PERM5 (Calcium-dependent protein kinase 1, putative n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5LM50_PERM5)

HSP 1 Score: 205 bits (522), Expect = 2.620e-58
Identity = 117/327 (35.78%), Postives = 180/327 (55.05%), Query Frame = 1 
Query:    1 VYDFTGPVLGSGAFATVLRVRDRMSGVEYAIKQVDLTGIKDDPSTMNMLYNEIKGMKMLSHPNIVRLQEVYEPKDEE------MLYMVLDRLEGGSV-DALRKQEGHIEEDHAGYIMAQVVDAVRYCHDFNIAHRDLKLANCMFEDNSPAPIIKVIDFGLCTELKDGQTSSAFVGTMTYAAPEVVTKNKG-HGIECDMWSIGVMTYVLIGGRFPFYADDRGALGHQIKFMAHSYKDAVWKGVSALCRDFIDKCLNKNPKTRTTAKQAQHHPWIKKAAKAMEGAPLSKGAMMSMMKFQETNLFEKIAMELVAYSYEPSQIKDLERHFR 957
            VYDF G +LG+G   +V  + +R +G + A+K++    +       + LYNE+     L HPNIVRL+EVYE ++         LYMV+++  GG + D L+  +   E D AG ++ Q+  AV YCH+ NI HRDLKL N MF D SP   +K+IDFG       G   +   GT  Y APEV+   KG H  +CD+WS+GV+TY+L+ G  PF   D  A+   ++   +S+  +VW  VS   ++FI + L K+P  R + K+A   PW++K  +  +   L    + ++  F    + ++ A+ L+A +    Q++ LE  FR
Sbjct:   38 VYDFDGRILGTGVSGSVRSITNRRTGQQSALKKLPTWNLSK--KKYDQLYNEVAIFLRLDHPNIVRLREVYEDRESASRWSRTFLYMVMEKCSGGELFDRLKDVQRFSEADAAG-LVKQMFSAVNYCHEHNICHRDLKLENWMFLDKSPNSPLKLIDFGFSQRFTSGVPLTRVCGTCFYVAPEVL---KGTHDQKCDIWSLGVITYMLLSGMPPFTGRDEQAILRSVRAAKYSFSASVWDDVSQEAKEFIMRLLTKDPARRPSCKEALQDPWLRKTWRGDQEPSLDTSVLTNLYHFAAAGVMKRAALGLIAMTMSTPQVRQLEEQFR 358
[Close]
BLAST of mRNA_S-dermatodea_contig8925.17016.1 vs. uniprot
Match: A0A6H5K413_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K413_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 3.090e-58
Identity = 121/336 (36.01%), Postives = 183/336 (54.46%), Query Frame = 1 
Query:   22 VLGSGAFATVLRVRDRMSGVEYAIK---QVDLTGIKDDPSTMNMLYNEIKGMKMLSHPNIVRLQEVYEPKDEEMLYMVL------------------DRLEGGSVDALRKQEGHIEEDHAGYIMAQVVDAVRYCHDFNIAHRDLKLANCMFEDNSPAPIIKVIDFGLCTELKDGQTSSAFVGTMTYAAPEVVTKNKGHGIECDMWSIGVMTYVLIGGRFPFYADDRGALGHQIKFMAHSYKDAVWKGVSALCRDFIDKCLNKNPKTRTTAKQAQHHPWIKKAAKAMEGAPLSKGAMMSMMKFQETNLFEKIAMELVAYSYEPSQIKDLERHFREVR 966
            +LG G F TV  V  + +  ++A+K    V+L+ +KD+ S +N  + E++ M+ L HPNI RL  VY   +   + MVL                  D  EGG    L        E +A  I+ +V +AVRY HD NIAHRDLKL N + ++      +K++DFGL    KD Q     VGT  Y APEV++ +      CDMWSIGV+ Y+L+ G  PF       L  QI+   + +    W  +S   ++FI + L +NP+ R +A +AQHHPW+     + + + LSK A+ +++ F++TN  +K+A+ELVA S +  QI+ LE+ F +V+
Sbjct:   12 LLGKGGFGTVQTVVHKETRKKFALKVGAAVELSRVKDEKS-LNFFFREVEVMRQLDHPNICRLHAVYPTVEHLFMVMVLYPGVENSFCTSHEHRLLQDLCEGGD---LLTTYHFKSERNAANIILKVTNAVRYMHDRNIAHRDLKLDNILTDETKEGADVKLVDFGLSAHFKDFQLEHDVVGTWVYMAPEVISGSH-FPRTCDMWSIGVIAYLLLCGYPPFGGTSTAELKDQIQHGTYQFHHDAWSDISGKAKNFIKRLLVRNPQERMSAAEAQHHPWLNDHDPSGKDSKLSKAAVHNLVNFRQTNALKKLALELVARSLDVEQIRKLEKDFAKVK 342
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8925.17016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUQ0_9PHAE1.560e-17876.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G562_ECTSI1.410e-13562.26Protein kinase domain containing protein n=1 Tax=E... [more]
A0A835YS30_9STRA4.670e-9346.06Kinase-like domain-containing protein n=1 Tax=Trib... [more]
D7FPG2_ECTSI1.480e-6471.72Calcium-dependent protein kinase n=1 Tax=Ectocarpu... [more]
A0A6H5KFV6_9PHAE7.820e-6439.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG93_ECTSI1.900e-6238.82Calcium-dependent protein kinase 2 (PfCDPK2) n=1 T... [more]
A0A835ZF12_9STRA9.880e-6240.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7T4K4_9STRA4.540e-5939.51Calcium-dependent protein n=3 Tax=Monodopsidaceae ... [more]
C5LM50_PERM52.620e-5835.78Calcium-dependent protein kinase 1, putative n=2 T... [more]
A0A6H5K413_9PHAE3.090e-5836.01Protein kinase domain-containing protein n=1 Tax=E... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8925contigS-dermatodea_contig8925:1704..8444 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score226.1
Seed ortholog evalue2.4e-56
Seed eggNOG ortholog2880.D8LG93
KEGG koko:K13412
KEGG Pathwayko04626,ko05145,map04626,map05145
GOsGO:0000165,GO:0000187,GO:0001817,GO:0001932,GO:0001934,GO:0002218,GO:0002221,GO:0002224,GO:0002237,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006082,GO:0006464,GO:0006468,GO:0006690,GO:0006691,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006950,GO:0006952,GO:0006954,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009931,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010468,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010646,GO:0010647,GO:0010857,GO:0015630,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018105,GO:0018193,GO:0018209,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019752,GO:0019899,GO:0019900,GO:0019901,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032147,GO:0032268,GO:0032270,GO:0032496,GO:0032675,GO:0032680,GO:0033554,GO:0033674,GO:0033993,GO:0034097,GO:0035556,GO:0035924,GO:0036211,GO:0042221,GO:0042325,GO:0042327,GO:0043085,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043436,GO:0043487,GO:0043488,GO:0043489,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044351,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0045859,GO:0045860,GO:0045934,GO:0045937,GO:0046777,GO:0048010,GO:0048255,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051019,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051338,GO:0051347,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0061013,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070848,GO:0070887,GO:0070935,GO:0071310,GO:0071363,GO:0071704,GO:0071900,GO:0071902,GO:0080090,GO:0080134,GO:0080135,GO:0098657,GO:0140096,GO:1900034,GO:1901564,GO:1901568,GO:1901700,GO:1902369,GO:1902373,GO:1902531,GO:1902533,GO:1903311,GO:1903312,GO:1903555
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0032@1,KOG0032@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Exons7
Model size978
Cds size978
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925373.243648-CDS-S-dermatodea_contig8925:1703..18021622925373.243648-CDS-S-dermatodea_contig8925:1703..1802Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8925 1704..1802 +
1694079889.3675623-CDS-S-dermatodea_contig8925:1703..18021694079889.3675623-CDS-S-dermatodea_contig8925:1703..1802Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8925 1704..1802 +
1622925373.254458-CDS-S-dermatodea_contig8925:2611..27191622925373.254458-CDS-S-dermatodea_contig8925:2611..2719Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8925 2612..2719 +
1694079889.3800373-CDS-S-dermatodea_contig8925:2611..27191694079889.3800373-CDS-S-dermatodea_contig8925:2611..2719Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8925 2612..2719 +
1622925373.264864-CDS-S-dermatodea_contig8925:3898..40691622925373.264864-CDS-S-dermatodea_contig8925:3898..4069Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8925 3899..4069 +
1694079889.3901772-CDS-S-dermatodea_contig8925:3898..40691694079889.3901772-CDS-S-dermatodea_contig8925:3898..4069Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8925 3899..4069 +
1622925373.2750664-CDS-S-dermatodea_contig8925:5610..57601622925373.2750664-CDS-S-dermatodea_contig8925:5610..5760Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8925 5611..5760 +
1694079889.4098508-CDS-S-dermatodea_contig8925:5610..57601694079889.4098508-CDS-S-dermatodea_contig8925:5610..5760Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8925 5611..5760 +
1622925373.2845995-CDS-S-dermatodea_contig8925:6177..63361622925373.2845995-CDS-S-dermatodea_contig8925:6177..6336Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8925 6178..6336 +
1694079889.4293568-CDS-S-dermatodea_contig8925:6177..63361694079889.4293568-CDS-S-dermatodea_contig8925:6177..6336Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8925 6178..6336 +
1622925373.2964787-CDS-S-dermatodea_contig8925:7046..72461622925373.2964787-CDS-S-dermatodea_contig8925:7046..7246Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8925 7047..7246 +
1694079889.440358-CDS-S-dermatodea_contig8925:7046..72461694079889.440358-CDS-S-dermatodea_contig8925:7046..7246Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8925 7047..7246 +
1622925373.3123055-CDS-S-dermatodea_contig8925:8353..84441622925373.3123055-CDS-S-dermatodea_contig8925:8353..8444Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8925 8354..8444 +
1694079889.4502077-CDS-S-dermatodea_contig8925:8353..84441694079889.4502077-CDS-S-dermatodea_contig8925:8353..8444Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8925 8354..8444 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8925.17016.1prot_S-dermatodea_contig8925.17016.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8925 1704..8444 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8925.17016.1

>prot_S-dermatodea_contig8925.17016.1 ID=prot_S-dermatodea_contig8925.17016.1|Name=mRNA_S-dermatodea_contig8925.17016.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=326bp
VYDFTGPVLGSGAFATVLRVRDRMSGVEYAIKQVDLTGIKDDPSTMNMLY
NEIKGMKMLSHPNIVRLQEVYEPKDEEMLYMVLDRLEGGSVDALRKQEGH
IEEDHAGYIMAQVVDAVRYCHDFNIAHRDLKLANCMFEDNSPAPIIKVID
FGLCTELKDGQTSSAFVGTMTYAAPEVVTKNKGHGIECDMWSIGVMTYVL
IGGRFPFYADDRGALGHQIKFMAHSYKDAVWKGVSALCRDFIDKCLNKNP
KTRTTAKQAQHHPWIKKAAKAMEGAPLSKGAMMSMMKFQETNLFEKIAME
LVAYSYEPSQIKDLERHFREVRWWE*
back to top

mRNA from alignment at S-dermatodea_contig8925:1704..8444+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8925.17016.1 ID=mRNA_S-dermatodea_contig8925.17016.1|Name=mRNA_S-dermatodea_contig8925.17016.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6741bp|location=Sequence derived from alignment at S-dermatodea_contig8925:1704..8444+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GTCTACGACTTCACGGGGCCCGTGCTTGGCTCCGGCGCGTTCGCGACGGT
CCTGAGGGTCAGGGACAGGATGTCGGGCGTGGAGTACGCCATCAAACAGG
TGCGCGGCTGCAGGCAGGGAGGCAGGCAGGCCGGCGGGCGCCACGTGCGC
TTGTGGCACGTTCGTGGGACGAAAAGAAACCCTCTTATCACGGAGATACA
CACATTAGTCAGGAGCAAGTTTCTGCTGATCGTGATGTAGTGGCGTGTTC
AAACCTGGCTTTTAAACCTTGGACCGAACACCCCTGTACTTGTACGTACT
ACATTTTGTGGTAGTGTTTGATTTGACGTTTCAGGCCGGAAGATTTTGCA
GAGATCTTGTCAAGGCCAGACCACACTGATTTTCTGGTCATATGATGTTG
GGTATGTATATTATGCATTTCGGTACATTTGGTCCTGAATATTTTGCACC
TCCGTATTATTGGCTCCTCCCAGACGACAGCGGCGTTGTGTGGCTCCAAG
CGCGGGGCGTGCTGTGTAGAGTTCCATGTGTATGAAGGGAGGGTTTTGCA
ATCGCGCGCGTTCTCTTGAAACCCGAGATATCGAGCGTAGACAGACTGCG
CCTGCGGCGACGTTTGTTTGCGAAGACGGCGTGAGAGCGCGCGCGCGCGC
TGTGTATGGGGGCGATGTCTGGGGTTATCGACCCGCCGAAATCCGGTACG
AGATGACTGATGCGGACGCCCACCGGCGTTTGAATCTCGTCCGTCCGTCC
TTCTGTCCGTAGTGAATCGTTCGACGTCGCGTTGAAGTTCGTTGCCTCTG
CCGCGATGCGCAAACCTTGAGAACTTCCGCGCCCCCCAACACACCCGGTC
GCGAACGACGACGCTGCTGAGTTTGTTTTTTTCACGCTACGTGCGCATCC
AAACTCAGGTGGACCTCACGGGCATCAAGGACGACCCATCGACCATGAAT
ATGCTCTATAACGAGATCAAGGGCATGAAGATGCTGTCTCATCCCAACAT
CGTGCGGTTACAGGAGGTGCGTGTTGCGGATTGTGTTGCAACGCAGCGCC
ATTCGGCGCGTTCTTTTGCTAAAGAGCCACAGGAGCCCTTGTGACTGCCG
TGCCCTCGAATTCGGTGTGTGTGTGGGGGGGGAGGGGGGGTAGGACTAGG
CAAAAGATATTTCGACAATGATAAAATATAACACGACGTGATCCTCCATA
GGGTTAGCTTGGACCATATTTTCTCCCTTAAACAAATTTGGACCCCAGCG
CTCTCTCTATGTTTTTGAAATCGTTTCTTGTTTCAGGGGGGGTTAGAAGT
AGCTTTTTTCGTTTTTCGGAATCCATCGGAAATGTTGTGCTCGGGGTAAG
CCGCGGCTATCATGAATTTGCCCTCTGTGGAGAGCAGATTTCCTATATCC
ATATCTGTCCCCAGTGTACACATCCATCCTGGGGGTTTCCTTTACCGACG
GAGGGAACTTCAACGACCACCGGAACCAGGATCAAGAACGGAGCATCACG
GCGTGGTCCTCCCCCAGACTACAAGACACCACAAATAATCAAGCGAGTCC
CCTCGCTACAAGACTGAAAAATAAAACCGCGCCTCGGGACTTCCGTCCCA
CGGACCCTCGTGTCGGCACCTCCAGATCTTGTAACACCTATTGAAATGTG
ACGGAACCTCACGCTAAAGGTTTGCGAACAAAACAGTGCCATGCCATGGC
TATCGTCACGTCTGGTGTCGGTGTGTTTTGTTGAGCGTGCATGGCGCGCG
TGTTGTCGATGCGGGTCGAGAAACACGCCTCCCGCACGGCGGTCGAGCAA
GGGGAATGAGCGTATTATTTGCACGTGGTTCTTGGTGGTGCCGCATAGAC
AAATCCGACGCATGGTTTTAGAAAAGCGATTTGTATTTCCGGACCGTTGT
TGATGTGCAGGCGGGTCTTCCGGTGCACTGCGACCGCACATTTTGCCCTC
CAGATATCTCCTGAGCACAGCAAGACGACACACATGAACACAGTACTTGT
AGTACGCCCGGCGGCGGCGGCGACGGCGGCGGCAGAGTCTCAACAAGCTT
GACACATATGGCCAAGAAAACAAGAAGAAATTAAGTAAACAAGAAAACGT
TTACAAGGACACTGCCTCTCTACATTCCTGCGCCTTTCGACATCACGTCT
CGTGGCGCTACTTGGCGCGTGGGTGTCGCTTCGCTTGTCGGACAGGTTTA
CGAGCCGAAAGACGAAGAAATGCTGTACATGGTGCTCGACCGCTTGGAAG
GGGGAAGCGTGGATGCGCTCCGCAAGCAGGAGGGCCACATCGAAGAGGAT
CACGCCGGTTACATCATGGCGCAGGTGGTCGACGCCGTTCGCTACTGCCA
CGACTTCAACATCGCGGTGAGTGGGAGTGTACTTATGTACTTATGTTAAA
CGTATGTCGTATCCAGACGGACATAGACCGCGCGTCCCAACAATGCCGGG
ACGGAGCGATATGCCGGGTGTGTTTTCGCGAACCACGCTGCGTTTCACAA
CGATAAGGATGATACCAGCTGCTAGCCGCCACCCTTGCGCTTGCGATGGC
ATCCGATACGCCATGGGCTAACTGGTCATACCAGATAACGAAATGTTGCA
CATTCAGTAGGCGAGACCAAGGGGGAGGGAAAATGAGGCCATACAGGAAT
GTGTGCATGGAGGCGGGAGCTTGTTTTGCTCAGCGCAGCGAGCATACCAT
GATACTACTTCGAAGTACATGCTAAAATGCGCCCGCTTTTCAACTCAGAA
CGTCAAGGACACGACGTTCGACCCTAAAGGCAGCCGGAATCCTATTTGTT
CAGTGTGTAGAAAGGAGCACTCGCTTGGTGTTGTTGGTCTTTGTGATCGT
TCAGAGACGATCAGCCTCGGCCGCGCATTCCGGAAACCTCCCGGATGCAC
GTTTAGGGGATACGGGCAATTTCCTTCGGGTCATATGCTCTCCACGCATC
GTTTTCGACGGTTCTGTGGGAACTTGAGCGCTTTGATATCGGAGCACGGA
ACGCGCCAGCCTGCACATTGCCGCGTTAGCCAGCACGGCATCTAACGTTA
GGCCAAAGGGGCGCCTTGTCGTACTTCTTTACACTATGGTGCCTCACACA
GAAGCACCAGCTCCATGCCTCGGTGTGCGTCTCGGCAGACAAGACAAGGG
TGCATGGGGCACGCCGTGGTGCCGCATGTGGCACGATTGTGGGGCCACCG
AGGGCGTTGCATGCTACCTCGGCGGTCGTACACTCACGCCGAAGGGTGCC
AAAGCTGTGCACCCCGTCCCGTTGTCGTTCGTTGGTCTGCCGCAATTGCT
GGCGATAATAGCGTACGCGCGTGCGATGCGTGGTTAACGTATCTCGATCA
CTTTTTTCTGCCCAACAGGAAGCGGTCGTGTCGTGTTGTGCCTCTTTATG
ATATCCCGCCGAAGGCACAGAAAAAGCCAGGGGTGTATTGTACAGTATGT
GTGGTTGTTTTAGTGAAATTGAAGAGGCGTTGCCTCGAAGTTTGTGCCTA
GGTGGGGTGGGATGGGGAGGTATCGTCTATCTCTCGGGCGGTACACCACC
ACACGCTACTACTCAGCTATAAAAAATCTCGTGCAGCGTGCATGAGATGT
GCGCTCAGTGGTTCGACCACTTCCGATGGGGGAAATAATTCACAAATCGT
CATATACAGACAGGAGGGCACATGCACAGTTTGGCCACGCTCTGCTGTGT
GTTATCCGCTACCCATGTAAACGTGCCAGAGAGGGGCCAATTCAAACAAG
CGACGCCACCCCGCGCTCTTTTTGATCGGTCGAGCATCCCCCGGGCGCTC
GCCCGTCTGTTTTCGTGGCAAAAAATATTCTACGTGCAAACCAAACCTAT
TCATTGCTAACAACAGCCTACCCCCGTCCTGGACCACGACCGCTATATGC
GCGTCAGCACCGCGACCTGAAGCTGGCGAACTGCATGTTCGAGGACAACT
CGCCGGCGCCGATCATAAAGGTCATCGACTTCGGCTTGTGCACCGAGCTT
AAGGACGGGCAGACCTCGAGCGCCTTCGTTGGAACCATGACGTACGCCGC
GCCTGAGGTGGGCTCGGGGGAGGGATCCGCCCGCGCTCTTGTGTGTGGAC
AAGGATTTGCCCCGTTTTTTTATTTTATTTTGCAATTCCCGTCGATCACG
CTTCAAAATTGATGCGCTGCTGCTACTGCTGCTCCGACTGGTGTTCACTG
GGTTTGCTATTGCCAATGGCTGTGTGGTGGGTCATGTCGCCTTTTGCCAG
TTTTAGTTTCCCCCGGGGTTATCGACCATCTTCATTGTCTCGCGCCCGGT
TTTCTATTTTCTGTTTCTTACCGAACGCTCTGCTTTGCGCTTCCAATCAC
ACACACACACAATGGTGGGCGACTTGCTCTTGGTCTTCTTGACTCCCCCA
TTTTGGAAAACGCGCCTCCTGGCTCGCGAACGCGCGCGCGCGCCCCGATC
GATGCCTCCGCTCCGAGTTCGCAGGTGGTCACGAAGAACAAAGGCCACGG
GATCGAGTGCGACATGTGGTCGATCGGCGTGATGACGTATGTCCTTATCG
GGGGACGCTTTCCTTTCTACGCGGACGACCGCGGCGCCCTCGGGCACCAG
ATCAAGTTCATGGCACACTCCTACAAAGACGCGGTGAGCGAGCGGTTTTT
CCTTGAAGGCGGCAGCATCAGGCGCGCGTCGAACACGACCCCTGAGGGAC
TGTGATTATACATCAAGACATCGGTGGTAGCCTTCCCGCGTGCACAGTCG
GTCGGGGACCTCCCGTGTGGGACGGCGCGGAGCGGCGCATTGGCAGGCGG
TACATAGCATGTGGTATTTAGCGCTGCGCGAGCGAGGCGGAGCCGTGCTC
GCCTTCCGGCGTGCGATCACCGCTGCTCGGCCCGTCTGTGGGGCGCCGCT
GATTTTGAGAGCTGGCGCGGAATACTGCCCTGTTATTCGGTGCTGCTAGT
GTCATTTTTCGCAATGTGGGACGTTTTTTTGCTGCTTGTATTCCTTCGTG
CGAGACTGCAGCGCTGGTAATTCTCTTCTTCCGCGAAGACGTTCTTGAGC
TACAATTTCTTTGCCTCACGTGCCAGTTAACCTCTGAACCCTCCCCCCCC
AACCCCCTCCCCCCCACGCCTACTAATCAACCCGTGGCATATCGTTTGGC
GTCACAAACACAAGGATGGTGACTATAATAGCAGTTGCTATCATCCTTGT
GAAACGCAGCCTGGCCGGTGAAAATTCGGCATATCGGTCCGTCCCGGTAT
TGTTGGGACGCGTGGTCTATGTCCGTCTGGATACGACATGCTGTTAACAT
AAGTGCTCCCCATCCCTCATGACGCACGTCCCTTCCCTCCAAGGTGTGGA
AAGGCGTGTCGGCGCTGTGTCGGGACTTCATCGACAAGTGTCTCAACAAG
AACCCCAAGACTAGGACAACGGCCAAGCAGGCCCAGCATCACCCGTGGAT
TAAGAAAGCCGCCAAGGCCATGGAGGGGGCGCCCCTGAGCAAGGGGGCGA
TGATGTCCATGATGAAGTTCCAGGAGACGAACCTGTTCGAGAAGTGAGAA
ATAATCTGCGACAAGGAGGATGTAGGGGAGGGGGGGAGGGGGCACAACAT
TATACGAAACATAAGCCTCCATAGGTGTAGCTTGGAACGTTTTCCCTCTC
CTCAAAATGGGACCCCAGTGCTTGTTCTATGTTTTTAAACCGTTTTATTA
CTTGGGGGAGGGGGGGTGCGAGCCCAGATCATCTCCTGCACACAGCATCG
ACCCGAAATCCCACCACGCTTGATCGTCTTGAGCCTTCAAGCCAGACATG
TTACAATAGTGCCACCGCAGACACGGCTACTGCTGCCGTACACAATATAT
AGCTTGCCGCTGCCGTGCAGGGGCGTCGCGCTCAAAGCCATAGAATCGTA
GAACCGACGTATAGGAGTAGTGAATGCCTCTAGCTCCACACGTCACAACA
ATCACCATGGAATGCACGCTGGGGTCCTTCACGCCACCATTGGGCATGAA
CACCATAATCTATCCGATTTCGATTAAGTGGTCTTGTTTGCCATGGGCCG
TACAGAGGACCGGTGTGTTAGCAAATGAAATGTACATGCATGTAAAGGTC
CTGGTAACTCAATTCGTAAAATATATGCTTGGCTGCTGGCCGAATCCGGG
CGTGAGGTGTAAATTCTGTGCTACATAGCCGTGAAACGTTGGGGAGCATG
CACTCCGACTCACGATCACCAGCAGGGCGTAAAAAGAAGCGTGCTCCTCG
CGAAATCCGTACCGTTCCCTAAGCGTAAAGATTGCCACTTAGGACATCGA
GAGTGTGATGAGCCCTTGCTGTAGGAGAGAGGGTTGATTCACAGATCTAA
CTGCTGAGGTAGGTCCTCTCTCTCAGTGCGAGCGTTGCGTTAAATCTATA
TTTTGCATAGATGATTCCGTGGGGTTTATTTGCGATGCCTCGTTTTCTGA
CCTGACCACGAGCGGGATCGGCAGCCATTGACGGGCCGAACGGCTGAAAG
TGTGATAATCAATCAACCAATCAATAATATATAAGTCAGTGCGCCTGGGT
CCTTAGCCACCCCACGCGTTCACAGACGTAGCGCTGTTGTCAAACGCAAC
GCATCCCCTCTAACGCGCGATATGCGTCGCCACGGCTCCCCCCGGAACAG
GATAGCCATGGAGCTCGTGGCTTACTCGTACGAGCCGTCGCAGATCAAGG
ACTTGGAGAGACACTTCCGCGAGGTAAGGTGGTGGGAGTAA
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig8925:1704..8444+

>mRNA_S-dermatodea_contig8925.17016.1 ID=mRNA_S-dermatodea_contig8925.17016.1|Name=mRNA_S-dermatodea_contig8925.17016.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1956bp|location=Sequence derived from alignment at S-dermatodea_contig8925:1704..8444+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GTCTACGACTTCACGGGGCCCGTGCTTGGCTCCGGCGCGTTCGCGACGGT
CCTGAGGGTCAGGGACAGGATGTCGGGCGTGGAGTACGCCATCAAACAGG
TCTACGACTTCACGGGGCCCGTGCTTGGCTCCGGCGCGTTCGCGACGGTC
CTGAGGGTCAGGGACAGGATGTCGGGCGTGGAGTACGCCATCAAACAGGT
GGACCTCACGGGCATCAAGGACGACCCATCGACCATGAATATGCTCTATA
ACGAGATCAAGGGCATGAAGATGCTGTCTCATCCCAACATCGTGCGGTTA
CAGGAGGTGGACCTCACGGGCATCAAGGACGACCCATCGACCATGAATAT
GCTCTATAACGAGATCAAGGGCATGAAGATGCTGTCTCATCCCAACATCG
TGCGGTTACAGGAGGTTTACGAGCCGAAAGACGAAGAAATGCTGTACATG
GTGCTCGACCGCTTGGAAGGGGGAAGCGTGGATGCGCTCCGCAAGCAGGA
GGGCCACATCGAAGAGGATCACGCCGGTTACATCATGGCGCAGGTGGTCG
ACGCCGTTCGCTACTGCCACGACTTCAACATCGCGGTTTACGAGCCGAAA
GACGAAGAAATGCTGTACATGGTGCTCGACCGCTTGGAAGGGGGAAGCGT
GGATGCGCTCCGCAAGCAGGAGGGCCACATCGAAGAGGATCACGCCGGTT
ACATCATGGCGCAGGTGGTCGACGCCGTTCGCTACTGCCACGACTTCAAC
ATCGCGCACCGCGACCTGAAGCTGGCGAACTGCATGTTCGAGGACAACTC
GCCGGCGCCGATCATAAAGGTCATCGACTTCGGCTTGTGCACCGAGCTTA
AGGACGGGCAGACCTCGAGCGCCTTCGTTGGAACCATGACGTACGCCGCG
CCTGAGCACCGCGACCTGAAGCTGGCGAACTGCATGTTCGAGGACAACTC
GCCGGCGCCGATCATAAAGGTCATCGACTTCGGCTTGTGCACCGAGCTTA
AGGACGGGCAGACCTCGAGCGCCTTCGTTGGAACCATGACGTACGCCGCG
CCTGAGGTGGTCACGAAGAACAAAGGCCACGGGATCGAGTGCGACATGTG
GTCGATCGGCGTGATGACGTATGTCCTTATCGGGGGACGCTTTCCTTTCT
ACGCGGACGACCGCGGCGCCCTCGGGCACCAGATCAAGTTCATGGCACAC
TCCTACAAAGACGCGGTGGTCACGAAGAACAAAGGCCACGGGATCGAGTG
CGACATGTGGTCGATCGGCGTGATGACGTATGTCCTTATCGGGGGACGCT
TTCCTTTCTACGCGGACGACCGCGGCGCCCTCGGGCACCAGATCAAGTTC
ATGGCACACTCCTACAAAGACGCGGTGTGGAAAGGCGTGTCGGCGCTGTG
TCGGGACTTCATCGACAAGTGTCTCAACAAGAACCCCAAGACTAGGACAA
CGGCCAAGCAGGCCCAGCATCACCCGTGGATTAAGAAAGCCGCCAAGGCC
ATGGAGGGGGCGCCCCTGAGCAAGGGGGCGATGATGTCCATGATGAAGTT
CCAGGAGACGAACCTGTTCGAGAAGTGTGGAAAGGCGTGTCGGCGCTGTG
TCGGGACTTCATCGACAAGTGTCTCAACAAGAACCCCAAGACTAGGACAA
CGGCCAAGCAGGCCCAGCATCACCCGTGGATTAAGAAAGCCGCCAAGGCC
ATGGAGGGGGCGCCCCTGAGCAAGGGGGCGATGATGTCCATGATGAAGTT
CCAGGAGACGAACCTGTTCGAGAAGATAGCCATGGAGCTCGTGGCTTACT
CGTACGAGCCGTCGCAGATCAAGGACTTGGAGAGACACTTCCGCGAGGTA
AGGTGGTGGGAGTAAGATAGCCATGGAGCTCGTGGCTTACTCGTACGAGC
CGTCGCAGATCAAGGACTTGGAGAGACACTTCCGCGAGGTAAGGTGGTGG
GAGTAA
back to top