mRNA_S-dermatodea_contig8916.17012.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8916.17012.1
Unique NamemRNA_S-dermatodea_contig8916.17012.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig8916.17012.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 8.390e-53
Identity = 101/143 (70.63%), Postives = 120/143 (83.92%), Query Frame = 1 
Query:    1 RATLQGAEAEVFKLMSYGATTEQWAEWLRAPLEDAAARGNLDLATRLLEAGANGGAGWKGCRGRTLLDAAALGGNADAVSGLLLAGYGSDMNVVSVSSRRSALYVAAVCGHEAAARELVEAGADINGYDPVDQCNPMH-ALQG 426
            RA L+GAE E+FKL+ +GAT EQWAEWLRAPLE AAARGNL L  RLL AGANGGAGW+GCRGRT+LDAAALGGN D V+ LL +G  SD+NVVS+SSRRSAL+VA+VCGHEAAA++L+ AGAD+N  DP D C  +H A++G
Sbjct:    7 RALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEG 149
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BLAST of mRNA_S-dermatodea_contig8916.17012.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 1.060e-49
Identity = 94/148 (63.51%), Postives = 117/148 (79.05%), Query Frame = 1 
Query:    1 RATLQGAEAEVFKLMSYGATTEQWAEWLRAPLEDAAARGNLDLATRLLEAGANGGAGWKGCRGRTLLDAAALGGNADAVSGLLLAGYGSDMNVVSVSSRRSALYVAAVCGHEAAARELVEAGADINGYDPVDQCNPM-HALQGEDTKV 441
            R +L G  +EVFKL+SYGA+ EQWAEWLR PLE AA+RGN +L  RLL+AGA+ GAGW+GCRGRTLLDAAALGGNAD +S L+  G G+D+N V+VSSRRSAL+ A  CGHEAAA+ LV  GAD+N  DPV +C+ +  A+QG  T++
Sbjct:    7 RTSLDGLGSEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSSRRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSVLSQAIQGSHTQL 154
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BLAST of mRNA_S-dermatodea_contig8916.17012.1 vs. uniprot
Match: D8LBP9_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBP9_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 1.430e-44
Identity = 92/130 (70.77%), Postives = 104/130 (80.00%), Query Frame = 1 
Query:    1 RATLQGAEAEVFKLMSYGATTEQWAEWLRAPLEDAAARGNLDLATRLLEAGANGGAGWKGCRGRTLLDAAALGGNADAVSGLLLAGYGSDMNVVSVSSRRSALYVAAVCGHEAAARELVEAGADINGYDP 390
            R  L+GAE  +F L+SYGAT EQW EWLRAPLE AAARG   L  +LL AGA+GGAGW GCRGRTLLDAAALGGN D V+ LL AG   D+NVVSVSSRRSAL+++AVCGHEAAAR+L+ AGAD N  DP
Sbjct:    5 RPVLEGAEVGIFTLLSYGATPEQWREWLRAPLEHAAARGEFVLVEKLLNAGADGGAGWSGCRGRTLLDAAALGGNPDVVTTLLRAGCLPDVNVVSVSSRRSALHLSAVCGHEAAARKLILAGADANRVDP 134
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BLAST of mRNA_S-dermatodea_contig8916.17012.1 vs. uniprot
Match: A0A6H5JY41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY41_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 3.510e-43
Identity = 90/138 (65.22%), Postives = 109/138 (78.99%), Query Frame = 1 
Query:    1 RATLQGAEAEVFKLMSYGATTEQWAEWLRAPLEDAAARGNLDLATRLLEAGANGGAGWKGCRGRTLLDAAALGGNADAVSGLLLAGYGSDMNVVSVSSRRSALYVAAVCGHEAAARELVEAGADINGYDPVDQCNPMH 414
            RA L+ AE E+FKL+S+GAT E+WAEWLRAP E AAARGN+ L  RLLEAGA+GGAGW+GCR RT+LDAAALGGNAD V+ LL +    D+NVVSVSS+RSAL++A    HEAAAR L+ AGAD +  DPV++  P H
Sbjct:    7 RALLEEAELEIFKLLSFGATPERWAEWLRAPQEHAAARGNIGLVERLLEAGADGGAGWRGCRSRTMLDAAALGGNADVVTKLLRSECVPDVNVVSVSSKRSALHLAVTWSHEAAARTLMIAGADNHRVDPVNRYTPFH 144
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BLAST of mRNA_S-dermatodea_contig8916.17012.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 2.900e-42
Identity = 89/138 (64.49%), Postives = 106/138 (76.81%), Query Frame = 1 
Query:    1 RATLQGAEAEVFKLMSYGATTEQWAEWLRAPLEDAAARGNLDLATRLLEAGANGGAGWKGCRGRTLLDAAALGGNADAVSGLLLAGYGSDMNVVSVSSRRSALYVAAVCGHEAAARELVEAGADINGYDPVDQCNPMH 414
            R  LQG E+E++KL+SY AT +QW EWLR PLE AAARGNL+L + LL AGA+G AGW+GCRGRTL+DAAALGG+   VS LL AG   D+NVVSVSS+RSALY A +CGHE AAR LV AGAD++  DPV     +H
Sbjct:    7 RRLLQGMESEIWKLVSYSATPQQWKEWLRMPLEHAAARGNLNLVSSLLGAGADGSAGWRGCRGRTLIDAAALGGSEPVVSTLLRAGAQWDVNVVSVSSKRSALYTATMCGHEDAARRLVAAGADVDFEDPVHGNPVLH 144
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BLAST of mRNA_S-dermatodea_contig8916.17012.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 3.040e-42
Identity = 90/150 (60.00%), Postives = 108/150 (72.00%), Query Frame = 1 
Query:    1 RATLQGAEAEVFKLMSYGATTEQWAEWLRAPLEDAAARGNLDLATRLLEAGANGGAGWKGCRGRTLLDAAALGGNADAVSGLLLAGYGSDMNVVSVSSRRSALYVAAVCGHEAAARELVEAGADINGYDPVDQCNPMH-ALQGEDTKVTG 447
            RA L+GAE E+FKL+S+ AT EQWA+WLRAPLE AAARGN+ L  RLLEAGA+G AGW+GCRGRT+LDAA              +G   D+NVVSVSS+RSAL++A VCGHEAAAR L+ AGA+I   DP DQC P H A +G    + G
Sbjct:    7 RALLEGAEVEIFKLLSFCATPEQWADWLRAPLEHAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLDAAXXXXXXXXXXXXXXSGCAPDVNVVSVSSKRSALHLAVVCGHEAAARTLMIAGANIRRVDPGDQCVPFHVAAEGGHGDLVG 156
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BLAST of mRNA_S-dermatodea_contig8916.17012.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI)

HSP 1 Score: 161 bits (408), Expect = 1.880e-41
Identity = 85/130 (65.38%), Postives = 101/130 (77.69%), Query Frame = 1 
Query:    1 RATLQGAEAEVFKLMSYGATTEQWAEWLRAPLEDAAARGNLDLATRLLEAGANGGAGWKGCRGRTLLDAAALGGNADAVSGLLLAGYGSDMNVVSVSSRRSALYVAAVCGHEAAARELVEAGADINGYDP 390
            R   QG  +E++KL+S+ AT +QW EWLR PLE AAARGNL+L   LLEAGA+G AGWKGCRGRTL+DAAALGG+   VS LL AG   D+NVVSVSS+RS+LY A VCGH+ AAR L+ AGAD+N  DP
Sbjct:    7 RRLFQGMGSEIWKLVSHSATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALGGSEPVVSALLRAGAQPDVNVVSVSSKRSSLYTATVCGHKDAARRLITAGADVNFEDP 136
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BLAST of mRNA_S-dermatodea_contig8916.17012.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 1.050e-39
Identity = 84/134 (62.69%), Postives = 103/134 (76.87%), Query Frame = 1 
Query:   16 GAEAEVFKLMSYGATTEQWAEWLRAPLEDAAARGNLDLATRLLEAGANGGAGWKGCRGRTLLDAAALGGNADAVSGLLLAGYGSDMNVVSVSSRRSALYVAAVCGHEAAARELVEAGADINGYDPVDQCNPMHA 417
            G E E+FK++S GAT EQWA WLRAPLE AAA GNL+L  RLL+AG +G AGW+GCRGR+LLDAAALGGNA  +S LL AG G D+NVV+ S+ RSALY + +  HEAAAR+L+ AGAD+N  D  D+  P+ A
Sbjct:   10 GEEVEIFKIVSEGATPEQWARWLRAPLEHAAASGNLNLVDRLLKAGVDGKAGWRGCRGRSLLDAAALGGNAGVMSALLQAGCGPDVNVVASSTGRSALYQSVLGKHEAAARKLILAGADVNFVDRADKAGPLFA 143
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BLAST of mRNA_S-dermatodea_contig8916.17012.1 vs. uniprot
Match: A0A6H5JW91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW91_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 1.580e-37
Identity = 80/131 (61.07%), Postives = 93/131 (70.99%), Query Frame = 1 
Query:    1 RATLQGAEAEVFKLMSYGATTEQWAEWLRAPLEDAAARGNLDLATRLLEAGANGGAGWKGCRGRTLLDAAALGGNADAVSGLLLAGYGSDMNVVSVSSRRSALYVAAVCGHEAAARELVEAGADINGYDPV 393
            R  L+G E E+FKL+SY AT EQW EWL+ PLE AAA GN DL  +LLEAGA G AGW+GCR R+L+DAAA+GGN D VSG L AG   D+ VVS SS+ SAL      GHE  AR LV AGAD+N  DP+
Sbjct:   50 RVLLEGLEIEIFKLVSYSATPEQWKEWLQVPLERAAALGNRDLFYKLLEAGAYGSAGWRGCRDRSLIDAAAVGGNVDVVSGFLEAGAEPDVQVVSWSSKTSALCTPVRFGHEDVARRLVTAGADVNFVDPM 180
[Close]
BLAST of mRNA_S-dermatodea_contig8916.17012.1 vs. uniprot
Match: D8LRS0_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS0_ECTSI)

HSP 1 Score: 148 bits (374), Expect = 1.290e-36
Identity = 79/118 (66.95%), Postives = 92/118 (77.97%), Query Frame = 1 
Query:    1 RATLQGAEAEVFKLMSYGATTEQWAEWLRAPLEDAAARGNLDLATRLLEAGANGGAGWKGCRGRTLLDAAALGGNADAVSGLLLAGYGSDMNVVSVSSRRSALYVAAVCGHEAAAREL 354
            R  LQG E+E++KL+SYGAT +QW EWLR PLE AAARGNL+L   LLEAGA+G AGW+GC  RTL+DAAALGG+   VS LL AG   D+N VS+SS+RSALY A VCGHE AAR L
Sbjct:    7 RRLLQGMESEIWKLVSYGATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWRGCLDRTLIDAAALGGSEPVVSALLRAGAQPDVNTVSISSKRSALYTATVCGHEHAARGL 124
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8916.17012.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1F4_9PHAE8.390e-5370.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNQ1_9PHAE1.060e-4963.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBP9_ECTSI1.430e-4470.77Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5JY41_9PHAE3.510e-4365.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS36_ECTSI2.900e-4264.49Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D8LE08_ECTSI3.040e-4260.00Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
D8LRZ8_ECTSI1.880e-4165.38Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7FXA8_ECTSI1.050e-3962.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JW91_9PHAE1.580e-3761.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRS0_ECTSI1.290e-3666.95Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8916contigS-dermatodea_contig8916:1903..3167 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score121.3
Seed ortholog evalue6.2e-25
Seed eggNOG ortholog2880.D8LBP9
KEGG koko:K21440
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Exons2
Model size1231
Cds size741
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8916.17012.1prot_S-dermatodea_contig8916.17012.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8916 2393..3167 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925373.0254495-UTR-S-dermatodea_contig8916:1902..23921622925373.0254495-UTR-S-dermatodea_contig8916:1902..2392Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8916 1903..2392 +
1694079889.2424018-UTR-S-dermatodea_contig8916:1902..23921694079889.2424018-UTR-S-dermatodea_contig8916:1902..2392Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8916 1903..2392 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925373.0410848-CDS-S-dermatodea_contig8916:2392..26571622925373.0410848-CDS-S-dermatodea_contig8916:2392..2657Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8916 2393..2657 +
1694079889.2662234-CDS-S-dermatodea_contig8916:2392..26571694079889.2662234-CDS-S-dermatodea_contig8916:2392..2657Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8916 2393..2657 +
1622925373.0521593-CDS-S-dermatodea_contig8916:2691..31671622925373.0521593-CDS-S-dermatodea_contig8916:2691..3167Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8916 2692..3167 +
1694079889.2760968-CDS-S-dermatodea_contig8916:2691..31671694079889.2760968-CDS-S-dermatodea_contig8916:2691..3167Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8916 2692..3167 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8916.17012.1

>prot_S-dermatodea_contig8916.17012.1 ID=prot_S-dermatodea_contig8916.17012.1|Name=mRNA_S-dermatodea_contig8916.17012.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=247bp
MFYRTPLHIAAELGHDKVSCALLVRAANKDALDLKMLSSLMLAAVRGHLA
TIKALLAAGADMGIRGKLNLPRFPAPMCCVMSAFDLAAPWRGRQSCYHNR
YGYTALNHATANNEVRAIRVLLDAGADVNASNCLCSPLLMAADHGRCGTL
VALLRGGADVNVQVAQTGLTALHMVLVVQVPGCEAAVDVLLRWVASETAV
AVNSRTAADLFEVSAVGSRCSEDELERVRALLARSPQDRAWRRRAGL
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mRNA from alignment at S-dermatodea_contig8916:1903..3167+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8916.17012.1 ID=mRNA_S-dermatodea_contig8916.17012.1|Name=mRNA_S-dermatodea_contig8916.17012.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1265bp|location=Sequence derived from alignment at S-dermatodea_contig8916:1903..3167+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CGCGCTACCCTGCAAGGAGCTGAGGCCGAAGTCTTCAAGCTCATGTCCTA
CGGCGCCACGACCGAGCAGTGGGCAGAGTGGCTCCGAGCGCCCTTGGAGG
ACGCCGCGGCCCGCGGTAATCTGGACCTCGCCACGAGACTGCTGGAGGCT
GGGGCTAACGGAGGGGCGGGCTGGAAGGGGTGCCGCGGCCGAACTCTGCT
CGATGCCGCCGCCCTTGGAGGTAACGCGGACGCGGTGTCTGGCTTGCTCC
TGGCAGGGTATGGTTCGGATATGAACGTGGTCTCGGTATCGTCGAGGAGG
TCGGCGCTGTACGTGGCGGCGGTCTGCGGACACGAAGCTGCGGCGAGGGA
GCTCGTGGAAGCCGGAGCGGATATCAACGGCTACGACCCAGTCGACCAGT
GTAACCCCATGCACGCGCTGCAAGGGGAGGACACAAAAGTAACTGGTGTG
CGATTTGTTGATTGGTGGGGCCTCCCCGAACGCCCGAGATATGTTTTATC
GCACCCCTCTTCATATAGCGGCTGAGCTGGGCCACGACAAGGTCTCTTGT
GCGCTGTTGGTTCGTGCGGCGAACAAGGATGCGCTGGATCTAAAAATGCT
GTCATCGCTCATGTTGGCCGCTGTGCGAGGCCACCTCGCCACCATCAAGG
CTCTCTTGGCTGCCGGAGCGGATATGGGCATACGCGGCAAACTAAATCTA
CCAAGGTTCCCAGCACCCATGTGCTGTGTGATGTCGGCGTTTGATCTGGC
GGCACGTGAGGGACTTGTGTACTGCAAGTCATGGTTGAGCATGGCGTGGA
CGTCAAAGCTGCTATCATAACAGATATGGTTACACCGCCCTGAACCACGC
TACGGCGAATAACGAAGTGCGTGCGATACGTGTGCTTCTTGATGCGGGGG
CCGATGTCAACGCAAGTAACTGTCTTTGCTCGCCCCTCCTAATGGCCGCC
GACCACGGCCGTTGTGGCACCTTGGTTGCTCTGTTGCGGGGCGGAGCGGA
TGTGAACGTGCAAGTGGCCCAAACCGGTTTAACTGCCCTGCATATGGTGC
TCGTAGTCCAAGTACCGGGTTGTGAGGCAGCCGTGGACGTTCTATTGAGG
TGGGTAGCGTCCGAAACTGCCGTTGCCGTCAATAGCCGCACTGCTGCTGA
TTTGTTCGAGGTCTCCGCCGTTGGCAGCAGGTGCTCGGAGGACGAGCTCG
AGAGGGTACGTGCTCTATTGGCTCGCTCCCCGCAAGACAGGGCCTGGCGT
CGCCGGGCTGGCTTG
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Coding sequence (CDS) from alignment at S-dermatodea_contig8916:1903..3167+

>mRNA_S-dermatodea_contig8916.17012.1 ID=mRNA_S-dermatodea_contig8916.17012.1|Name=mRNA_S-dermatodea_contig8916.17012.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1482bp|location=Sequence derived from alignment at S-dermatodea_contig8916:1903..3167+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTTTTATCGCACCCCTCTTCATATAGCGGCTGAGCTGGGCCACGACAA
GGTCTCTTGTGCGCTGTTGGTTCGTGCGGCGAACAAGGATGCGCTGGATC
TAAAAATGCTGTCATCGCTCATGTTGGCCGCTGTGCGAGGCCACCTCGCC
ACCATCAAGGCTCTCTTGGCTGCCGGAGCGGATATGGGCATACGCGGCAA
ACTAAATCTACCAAGGTTCCCAGCACCCATGTGCTGTGTGATGTCGGCGT
TTGATCTGGCGGCACATGTTTTATCGCACCCCTCTTCATATAGCGGCTGA
GCTGGGCCACGACAAGGTCTCTTGTGCGCTGTTGGTTCGTGCGGCGAACA
AGGATGCGCTGGATCTAAAAATGCTGTCATCGCTCATGTTGGCCGCTGTG
CGAGGCCACCTCGCCACCATCAAGGCTCTCTTGGCTGCCGGAGCGGATAT
GGGCATACGCGGCAAACTAAATCTACCAAGGTTCCCAGCACCCATGTGCT
GTGTGATGTCGGCGTTTGATCTGGCGGCACCATGGCGTGGACGTCAAAGC
TGCTATCATAACAGATATGGTTACACCGCCCTGAACCACGCTACGGCGAA
TAACGAAGTGCGTGCGATACGTGTGCTTCTTGATGCGGGGGCCGATGTCA
ACGCAAGTAACTGTCTTTGCTCGCCCCTCCTAATGGCCGCCGACCACGGC
CGTTGTGGCACCTTGGTTGCTCTGTTGCGGGGCGGAGCGGATGTGAACGT
GCAAGTGGCCCAAACCGGTTTAACTGCCCTGCATATGGTGCTCGTAGTCC
AAGTACCGGGTTGTGAGGCAGCCGTGGACGTTCTATTGAGGTGGGTAGCG
TCCGAAACTGCCGTTGCCGTCAATAGCCGCACTGCTGCTGATTTGTTCGA
GGTCTCCGCCGTTGGCAGCAGGTGCTCGGAGGACGAGCTCGAGAGGGTAC
GTGCTCTATTGGCTCGCTCCCCGCAAGACAGGGCCTGGCGTCGCCGGGCT
GGCTTGCATGGCGTGGACGTCAAAGCTGCTATCATAACAGATATGGTTAC
ACCGCCCTGAACCACGCTACGGCGAATAACGAAGTGCGTGCGATACGTGT
GCTTCTTGATGCGGGGGCCGATGTCAACGCAAGTAACTGTCTTTGCTCGC
CCCTCCTAATGGCCGCCGACCACGGCCGTTGTGGCACCTTGGTTGCTCTG
TTGCGGGGCGGAGCGGATGTGAACGTGCAAGTGGCCCAAACCGGTTTAAC
TGCCCTGCATATGGTGCTCGTAGTCCAAGTACCGGGTTGTGAGGCAGCCG
TGGACGTTCTATTGAGGTGGGTAGCGTCCGAAACTGCCGTTGCCGTCAAT
AGCCGCACTGCTGCTGATTTGTTCGAGGTCTCCGCCGTTGGCAGCAGGTG
CTCGGAGGACGAGCTCGAGAGGGTACGTGCTCTATTGGCTCGCTCCCCGC
AAGACAGGGCCTGGCGTCGCCGGGCTGGCTTG
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