mRNA_S-dermatodea_contig8907.17003.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8907.17003.1
Unique NamemRNA_S-dermatodea_contig8907.17003.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig8907.17003.1 vs. uniprot
Match: D8LGQ1_ECTSI (Choline transporter-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGQ1_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.120e-43
Identity = 91/183 (49.73%), Postives = 123/183 (67.21%), Query Frame = 3 
Query:   21 QVSAAAVNSMPWLVRSTIILGTARLLWILVAAVASLGAFVALESVTAPDGTSYRAVNCFNPLGFMDKVYPGTALLAGGATPPGPSCICSGQKISDEECEFSGLGIPFAVLGVISLVWGAAVFSNMITCTVSGAVASWWFTPDRSSAAVKGAFYRATHSSFGTLCKAALGQSALGVVRLLAQLV 569
            +V++ A+  MPW  RS I++G  + LW +VAA+A+LG+FVALE+V APDG+S+RA+ C +     D    G  + A        SC+C+G KISD ECEFSGLG+P  ++ + S+ WG  V  N++ CTVSG+VASWWFTP+  S  VKGAF+RAT SSFG+LCKAA  Q  +     +AQ V
Sbjct:  208 KVASMAIRDMPWTYRSAILMGIVQFLWCMVAAIAALGSFVALETVAAPDGSSHRAIYCLDFADGGDGGGGGEDVFAAQN-----SCVCNGTKISDGECEFSGLGLPLMMVWLCSMAWGCGVIRNVVACTVSGSVASWWFTPEEDSTPVKGAFHRATTSSFGSLCKAAAIQQLIAAACKVAQRV 385
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BLAST of mRNA_S-dermatodea_contig8907.17003.1 vs. uniprot
Match: D7FN10_ECTSI (Choline transporter-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN10_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 1.240e-30
Identity = 83/203 (40.89%), Postives = 123/203 (60.59%), Query Frame = 3 
Query:   21 QVSAAAVNSMPWLVRSTIILGTARLLWILVAAVASLGAFVALESVTAPDGTSYRAVNCFNPLGFMDKVYPGTALLAGGATPPGPSCICSGQKIS-DEECEFSGLGIPFAVLGVISLVWGAAVFSNMITCTVSGAVASWWFTPDRSSAAVKGAFYRATHSSFGTLCKAALGQSALGVVRLLAQLVHPARRV--CPPRVLG*LCR 620
            +V+  AV SMPW VR+ +++   ++LW+L++A+A+ G   +L +VT  DGT+Y+A +C + +  +D    G             SC+C G   S +  CE+ G G+  A+  + SL WGA V  N++T TV+G+VASWW++ DR ++ V+GA YRATH SFG+LCKAA   +A   VRLL + V    +V  C   VLG L R
Sbjct:  175 KVAGLAVKSMPWTVRAGLLMSGVQVLWVLLSAMAAGGTIASLRTVTGLDGTTYKASSCSDVM--LDPPTRGMVHHL--------SCMCGGHVASYNSACEYEGRGLWLALFWLASLTWGADVIRNVVTATVTGSVASWWYSADRDASPVRGALYRATHGSFGSLCKAAAISTA---VRLLTRTVRRLAKVGRCGSFVLGWLQR 364
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BLAST of mRNA_S-dermatodea_contig8907.17003.1 vs. uniprot
Match: D7FHM5_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM5_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 9.550e-27
Identity = 77/177 (43.50%), Postives = 108/177 (61.02%), Query Frame = 3 
Query:   24 VSAAAVNSMPWLVRSTIILGTARLLWILVAAVASLGAFVALESVT-APDGTSYRAVNCFNPLGFMDKVYPGTALLAGGATP-PGPSCICSGQKIS-DEECEFSGLGIPFAVLGVI---SLVWGAAVFSNMITCTVSGAVASWWFTPDRSSAAVKGAFYRATHSSFGTLCKAALGQSA 536
            V+A AV SMP  +   + +G  R++W +++A++++G+FVA   V  + DGT+Y  + C       D V   +    G AT   G SC C G+ IS D  CEFSG G    VLGV    S +WG  V  +++  TV+G+VASWWF+P  +++ V+GAFYRATHSSFG+LCKA   Q A
Sbjct:   91 VAALAVRSMPGTIYLALFMGAMRVVWFMLSALSAVGSFVAFSPVVVSADGTTYSFLGC------QDIVVSSSPYGGGEATTGSGLSCHCGGEVISSDSGCEFSGGGFQRWVLGVFWVGSFIWGLDVLHDVVLATVAGSVASWWFSPGDTNS-VRGAFYRATHSSFGSLCKACPTQMA 260
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BLAST of mRNA_S-dermatodea_contig8907.17003.1 vs. uniprot
Match: D7FHM6_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM6_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 6.000e-25
Identity = 85/211 (40.28%), Postives = 117/211 (55.45%), Query Frame = 3 
Query:   21 QVSAAAVNSMPWLVRSTIILGTARLLWILVAAVASLGAFVALESVTA-PDGTSYRAVNCFNPLGFMDKVYPGTALLAGGATPPGPSCICSGQKIS-DEECEFSGLGIPFAVLGVI---SLVWGAAVFSNMITCTVSGAVASWWFTPDRSSAAVKGAFYRATHSSFGTLCKAALGQSALGVVRLLAQLVHPARRVCPPRVLG*LCRRLRGDV 638
            +V+A AV SMP  +R  + +   +++W +++A A+ G+F A   V    DGT+Y ++ C   +      Y G    AG     G SC C G+ IS D  CEFSG G P  VL      S+ W  AV  N++T TV+G+VASWWF+P  +S+ V+GAFYRATHSSFG+LCKAA       +V ++   + P R V     L    RR R  V
Sbjct:  281 KVAALAVRSMPGTIRLALFMSAVQVVWSMLSASAAGGSFAAFSPVVVGADGTTYSSLEC-QDITVPSSPYGGGETTAGS----GLSCHCGGEVISSDSGCEFSG-GFPRWVLAAFWLGSVTWVIAVLRNVVTATVAGSVASWWFSPGDTSS-VRGAFYRATHSSFGSLCKAA------AIVAVIRVAMFPLRLVSHALCLRCFLRRFRDAV 478
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BLAST of mRNA_S-dermatodea_contig8907.17003.1 vs. uniprot
Match: D7FHM4_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM4_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 4.290e-21
Identity = 69/166 (41.57%), Postives = 96/166 (57.83%), Query Frame = 3 
Query:   21 QVSAAAVNSMPWLVRSTIILGTARLLWILVAAVASLGAFVALES-VTAPDGTSYRAVNCFNPLGFMDKVYPGTALLAGGATPPGPSCICSGQKIS-DEECEFSGLGIPFAVLGVI---SLVWGAAVFSNMITCTVSGAVASWWFTPDRSSAAVKGAFYRATHSSFG 503
            +V+A AV SMP  +R  + +   +++W +++A A+ G+F A    V   DGT+Y ++ C   +      Y G    AG     G SC C G+ IS D  CEFS  G P  VL      S+ W  AV  N++T TV+G+VASWWF+P   + +V+GAFYRATHSSFG
Sbjct:   84 KVAALAVRSMPGTIRLALFMSAVQVVWSMLSASAAWGSFAAFSPMVVGADGTTYSSLEC-QDIAVPSSPYGGGETTAGS----GLSCHCGGEVISSDSGCEFSS-GFPRWVLAAFWLGSVTWVIAVLRNVVTATVAGSVASWWFSPG-DTRSVRGAFYRATHSSFG 242
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BLAST of mRNA_S-dermatodea_contig8907.17003.1 vs. uniprot
Match: A0A6H5K950_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K950_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 4.430e-11
Identity = 55/170 (32.35%), Postives = 85/170 (50.00%), Query Frame = 1 
Query:  616 AVDYVVTYAVCCVGIYGLNVKEAG---------------------RRVRQLFEGRAVTAVANDCVMMLGLYVLMSLVLVESAIVLAIFLPIAQNAAASTGTGTVGLHMGPTVVASIITSVTLC--AMAEVVWCGFKTVFVCFVHHPEALARNHDQHLHEGLNAAWNEINA 1056
            AV Y  TYA+C +GIYGL+  E                       RRV +LF+ R +T +AND ++ +GL+ L+++ L+ + +V+A    +       +G+   GL M   V+  +   V +C      V+  G   VFVCFV  PEALA NH    ++ L+ AW ++ A
Sbjct:    7 AVGYASTYAICFIGIYGLDFSEGAGAHPISRTTGSFAYQPMGSALRRVHELFQRRGITMIANDDIVAVGLF-LLTMGLMSTYLVVACSSLVMLTGVQFSGSWD-GLIMF-VVLVFVFVPVAVCFSTTMSVLRSGHNAVFVCFVQDPEALANNHGSQRYDDLSEAWQQMQA 173
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BLAST of mRNA_S-dermatodea_contig8907.17003.1 vs. uniprot
Match: A0A7S1TXQ5_9STRA (Choline transporter-like protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXQ5_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 5.900e-9
Identity = 52/189 (27.51%), Postives = 87/189 (46.03%), Query Frame = 3 
Query:   21 QVSAAAVNSMPWLVRSTIILGTARLLWILVAAVASLGAFVA--LESVTAPDGTSYRAVNCFNPLGFMDKVYPGTALLAGGATPPGPSCICSGQKISDEECEFSGLGIPFAVLGVISLVWGAAVFSNMITCTVSGAVASWWFTPDRSSAAVKGAFYRATHSSFGTLCKAALGQSALGVVRLLAQLVHPAR 581
            +V+  AVN MP  +     +   ++LW ++  +A  G       +SVT  +G  +   +C+      D+V   T    G  +   P          D +C  + +      L ++S  WG    SN++ CTV+GAVA+WWF P    + V GA  R+  +SFG++   A G   + +++   Q+V  AR
Sbjct:  217 KVATTAVNEMPATLYYAYGIMLVQILWCVLWCLALYGTISDPDADSVTI-NGDDFDLDDCYQVTSTTDEVNKPTGCYCGNESDSDPH--------KDGDCIETSINGGIWFLMLVSFYWGVTTISNVVHCTVAGAVATWWFNPAPGKSPVTGALKRSLTTSFGSI---AFGSLLVAIIKATRQVVRAAR 393
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BLAST of mRNA_S-dermatodea_contig8907.17003.1 vs. uniprot
Match: A0A6G0WMC4_9STRA (Choline transporter-like protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMC4_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.520e-8
Identity = 34/96 (35.42%), Postives = 58/96 (60.42%), Query Frame = 3 
Query:  282 CSGQKISDEECEFSGLGIPFAVLGVISLVWGAAVFSNMITCTVSGAVASWWFTPDRSSAAVKGAFYRATHSSFGTLCKAALGQSALGVVRLLAQLV 569
            C  ++   E C  +G  +    L ++S+ WG  V  N++TCTV+G VA+WW+   R++ AV G+ YR+  +SFG++C  +L  + L  +R  AQ++
Sbjct:  217 CKKEEARGELCGGAGFNVTLFFL-LVSIYWGQQVIQNVMTCTVAGTVATWWYNT-RTNNAVSGSLYRSLTTSFGSICFGSLIVAILSAMRTTAQMI 310
[Close]
BLAST of mRNA_S-dermatodea_contig8907.17003.1 vs. uniprot
Match: W4G5R8_9STRA (Choline transporter-like protein n=4 Tax=Aphanomyces TaxID=100860 RepID=W4G5R8_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.080e-7
Identity = 33/96 (34.38%), Postives = 57/96 (59.38%), Query Frame = 3 
Query:  282 CSGQKISDEECEFSGLGIPFAVLGVISLVWGAAVFSNMITCTVSGAVASWWFTPDRSSAAVKGAFYRATHSSFGTLCKAALGQSALGVVRLLAQLV 569
            C  ++   E C  +G  +    L ++S+ WG  V  N++TCTV+G VA+WW+   R+ +AV G+ YR+  SSFG++C  +L  + L  +R + + +
Sbjct:  223 CEQEESRGELCGGAGFNVTIFFL-LVSVYWGQQVIQNVMTCTVAGTVATWWYNA-RTESAVAGSLYRSLTSSFGSICFGSLIVAVLQALRTIVRTI 316
[Close]
BLAST of mRNA_S-dermatodea_contig8907.17003.1 vs. uniprot
Match: W4G637_9STRA (Choline transporter-like protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G637_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.120e-7
Identity = 33/96 (34.38%), Postives = 57/96 (59.38%), Query Frame = 3 
Query:  282 CSGQKISDEECEFSGLGIPFAVLGVISLVWGAAVFSNMITCTVSGAVASWWFTPDRSSAAVKGAFYRATHSSFGTLCKAALGQSALGVVRLLAQLV 569
            C  ++   E C  +G  +    L ++S+ WG  V  N++TCTV+G VA+WW+   R+ +AV G+ YR+  SSFG++C  +L  + L  +R + + +
Sbjct:  239 CEQEESRGELCGGAGFNVTIFFL-LVSVYWGQQVIQNVMTCTVAGTVATWWYNA-RTESAVAGSLYRSLTSSFGSICFGSLIVAVLQALRTIVRTI 332
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8907.17003.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LGQ1_ECTSI1.120e-4349.73Choline transporter-like protein n=2 Tax=Ectocarpu... [more]
D7FN10_ECTSI1.240e-3040.89Choline transporter-like protein n=2 Tax=Ectocarpu... [more]
D7FHM5_ECTSI9.550e-2743.50Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
D7FHM6_ECTSI6.000e-2540.28Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
D7FHM4_ECTSI4.290e-2141.57Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5K950_9PHAE4.430e-1132.35Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A7S1TXQ5_9STRA5.900e-927.51Choline transporter-like protein n=2 Tax=Phaeomona... [more]
A0A6G0WMC4_9STRA1.520e-835.42Choline transporter-like protein n=1 Tax=Aphanomyc... [more]
W4G5R8_9STRA1.080e-734.38Choline transporter-like protein n=4 Tax=Aphanomyc... [more]
W4G637_9STRA1.120e-734.38Choline transporter-like protein n=1 Tax=Aphanomyc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8907contigS-dermatodea_contig8907:2009..7166 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score175.6
Seed ortholog evalue2.1e-41
Seed eggNOG ortholog2880.D8LGQ1
EggNOG free text desc.choline transmembrane transporter activity
EggNOG OGsKOG1362@1,KOG1362@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons5
Model size2903
Cds size564
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925372.4801142-UTR-S-dermatodea_contig8907:2008..20551622925372.4801142-UTR-S-dermatodea_contig8907:2008..2055Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8907 2009..2055 +
1694079888.9448936-UTR-S-dermatodea_contig8907:2008..20551694079888.9448936-UTR-S-dermatodea_contig8907:2008..2055Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8907 2009..2055 +
1622925372.5360239-UTR-S-dermatodea_contig8907:4190..42611622925372.5360239-UTR-S-dermatodea_contig8907:4190..4261Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8907 4191..4261 +
1694079888.996758-UTR-S-dermatodea_contig8907:4190..42611694079888.996758-UTR-S-dermatodea_contig8907:4190..4261Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8907 4191..4261 +
1622925372.5492575-UTR-S-dermatodea_contig8907:4569..48651622925372.5492575-UTR-S-dermatodea_contig8907:4569..4865Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8907 4570..4865 +
1694079889.019272-UTR-S-dermatodea_contig8907:4569..48651694079889.019272-UTR-S-dermatodea_contig8907:4569..4865Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8907 4570..4865 +
1622925372.561513-UTR-S-dermatodea_contig8907:5241..71661622925372.561513-UTR-S-dermatodea_contig8907:5241..7166Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8907 5242..7166 +
1694079889.031433-UTR-S-dermatodea_contig8907:5241..71661694079889.031433-UTR-S-dermatodea_contig8907:5241..7166Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8907 5242..7166 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925372.4953701-CDS-S-dermatodea_contig8907:2055..23131622925372.4953701-CDS-S-dermatodea_contig8907:2055..2313Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8907 2056..2313 +
1694079888.9583108-CDS-S-dermatodea_contig8907:2055..23131694079888.9583108-CDS-S-dermatodea_contig8907:2055..2313Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8907 2056..2313 +
1622925372.5104816-CDS-S-dermatodea_contig8907:3384..35811622925372.5104816-CDS-S-dermatodea_contig8907:3384..3581Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8907 3385..3581 +
1694079888.970623-CDS-S-dermatodea_contig8907:3384..35811694079888.970623-CDS-S-dermatodea_contig8907:3384..3581Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8907 3385..3581 +
1622925372.524468-CDS-S-dermatodea_contig8907:4081..41901622925372.524468-CDS-S-dermatodea_contig8907:4081..4190Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8907 4082..4190 +
1694079888.9816313-CDS-S-dermatodea_contig8907:4081..41901694079888.9816313-CDS-S-dermatodea_contig8907:4081..4190Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8907 4082..4190 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8907.17003.1prot_S-dermatodea_contig8907.17003.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8907 2056..4190 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8907.17003.1

>prot_S-dermatodea_contig8907.17003.1 ID=prot_S-dermatodea_contig8907.17003.1|Name=mRNA_S-dermatodea_contig8907.17003.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=188bp
MPWLVRSTIILGTARLLWILVAAVASLGAFVALESVTAPDGTSYRAVNCF
NPLGFMDKVYPGTALLAGGATPPGPSCICSGQKISDEECEFSGLGIPFAV
LGVISLVWGAAVFSNMITCTVSGAVASWWFTPDRSSAAVKGAFYRATHSS
FGTLCKAALGQSALGVVRLLAQLVHPARRVCPPRVLG*
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mRNA from alignment at S-dermatodea_contig8907:2009..7166+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8907.17003.1 ID=mRNA_S-dermatodea_contig8907.17003.1|Name=mRNA_S-dermatodea_contig8907.17003.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5158bp|location=Sequence derived from alignment at S-dermatodea_contig8907:2009..7166+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCCACCCCTTACTGCCGAACCAGGTTTCTGCTGCGGCTGTCAACTCCATG
CCCTGGCTCGTCCGTTCCACCATAATCTTAGGGACGGCGCGGTTGTTGTG
GATCCTTGTCGCGGCTGTCGCTTCTCTAGGGGCTTTCGTCGCTCTCGAGT
CCGTCACCGCGCCGGATGGCACGTCCTACCGCGCGGTAAACTGCTTCAAC
CCCTTGGGGTTTATGGATAAGGTCTACCCCGGCACTGCCCTCTTGGCTGG
CGGAGCGACTCCACCTGGCCCTTCGTGCATATGCAGCGGTCAGAAGATTT
CAGACGTGAGTCCTGATACTTCCTGCTGACAGCTAGGTGGTGTCATGCCC
GGTGATTGTGGCGCTTGCAAATTGGTGGAAGAGGCGTGAAGATTAACTAC
TGAATTGTAGGCAGGCAACACCAGCGTATTTGCTATGATAATACAGGCTT
TGCGGCTGGTGGCCGTTACTACTCTTCGTTCGTGAAGCTATGTACATCTC
CGGGTGATTTCTTGTATTGGCTGGAATCTTCGGCCTGGTTAATGAGGCGG
GTTTAGACTTGGCGGGCGACTTTCGTCATACAACCTTTTCTGTAAACAGG
TTCACCGGGGATTTAGTACGTATTGACTAAAGCAGGTACACTTCGAGAGA
GCACTTGTAGCGACCGCCAGAACACCTATTTCCGGTGAACAGTGCCTGGA
CTCCATGGGCGACCGTTCCTCGAAGATTGTGTTTGCACCGTCGACTCACA
CCACTTGGCACAGGCTGAGCTCCACCAAGACCCCATTTGTACCTGATTGC
GACCAATGTTGCTCCAAATGCACCCAATCGCGTTAATTCCACCCTGTTCG
GCCGTCACCACCTGATGTGTCTTTCAGATGATCCTATGTAGTATACTGGC
GCCTGATACGGATCTAAGCTCGGGACAGGAATTCGGTCCTCGCAATACAA
AATACCGGCTTGCGTGTAGCGTGGCCTGTGCGCGGCTTGTTGGCCGTGTC
TTTGTTGTCGGGGAATGATTGCCCCATGAAGTCCAGTCAGTGCTGCTGTG
TGCCCCAGGAAACATCACGAAAATTGCTGTTCCAGAGGTCGCTGGCGACA
CTGGCGGTAGCGATCTCGAAAGGTACACCTGCTTCGGTGCAGTGCACCTG
CTTAACCCTAGAACACCCGCTGTAGTACCTAATCTGGGGTAAAGCCCTTG
GACCGTTTCTACCATCGAAGGGTGCACGTCACAAGTCTTCTCACTCACAC
GTGAAACGTGTACATTGCACTGTACACGAACGGGAAAACCGAACTATCTT
GGTGGAAATTTTACGCGCGCCCGACCTTCCTGTTGCCCACCATTACACGC
GTTTGACAATTCCTTCCATATCTCAGGAAGAATGCGAGTTCAGTGGTCTC
GGTATTCCCTTCGCGGTCTTGGGGGTTATCAGCCTGGTCTGGGGCGCCGC
CGTTTTCAGTAACATGATCACGTGCACCGTGAGCGGCGCGGTGGCTTCCT
GGTGGTTCACGCCTGACCGCAGCTCTGCTGCAGTCAAGGGAGCGTTCTAC
CGCGCCACTCACTCTTCTTTCGGGTATGCGCATGATGTGGTTTATCGTTA
AAATATTTTCATACATGGGCTCGGAGAGCCGCTTCGCTGGTCGATTTGTA
CGCTTAGCATGCGTGCTTTATGGCAAGCATCGCTGGCTTCGCCCGTGAGC
GTGGTGCGTTGCTGCCCCGCGTGGTGCTGTCGAAGCGGGGTTACAGCCAA
CGGCCGAGTGGCATGCCTCCAGTTTGTGCATCGAAGTGTTTTATTTTCTC
GTGATGAAACGAAAACGACGTGTTCCTCGCTACCTCTTGAGTACGGCTGT
ACGTCGTGCTGTCTTAGCCTTAGCCTTGCATGTGAACGGCAAACACGCTT
GTATCTGCATCGTATGGAGCGGAAGGACTTGCTCCCATGTTTCGGCCGTG
ATGTTCGCGTTGGTGTACCAGTGACTTATATATTAGAGGTATTTACTACT
GCTCCTGCTCCGCCAAGGCCATAGCCATCTCCCTTGTTATCATACCCCTT
CTCTCTCGCGCGTGTTTGAGCAGAACCCTTTGTAAGGCCGCCCTGGGGCA
GAGCGCGTTGGGAGTGGTGCGGCTGCTGGCACAGCTTGTTCATCCTGCCC
GGCGGGTGTGCCCTCCTCGCGTGCTTGGGTGACTATGCCGTCGATTACGT
GGTGACGTACGCCGTGTGCTGCGTCGGCATTTATGGGCTCAACGTGAAAG
AAGGTCGGTGCATTCGTGATATTTGGCCTATTGTACCACAAGGCTTCTTT
CCTTTACTAAACCCGTGGCCATCGTGTCATAATTTTGTCATTTTCTTGCT
GTACTCATTCATTGGAAGCGAACACCTTTGAGCGGATTGGTTCATATATA
TATATATATGTATATATTGTCAACTTATTTTACCAGGGAAAATTACTCCA
GGAGAACCTAAGAAATACACGTCCATCTGATTTCCCAATATTGACATGCC
ACCCCCACACTTTTCGCCGATACGCGTGCCATCTTTTCCGCCATGGGATA
ACACGCAACAGCCGGGCGTCGCGTTCGCCAGCTGTTCGAAGGGCGCGCCG
TGACCGCTGTTGCCAACGACTGCGTTATGATGCTGGGGCTGTACGTGCTC
ATGAGTTTGGTTCTAGTGGAGTCCGCAATCGTTTTGGCGATTTTTTTGCC
CATCGCGCAAAATGCCGCGGCAAGCACTGGCACTGGCACGGTGGGACTTC
ACATGGGACCCACGGTCGTCGCGTCAATCATTACCTCTGTGACGTTGTGC
GCTATGGCCGAGGTGGTCTGGTGCGGCTTCAAGACGGTGTTCGTGTGCTT
CGTCCACGTGAGAAGAGATCCGCGCTATTGCGAGGAGATGTCTGTTTTGC
GAGGAGGCGGGAGGTTCAAATACAGTACTTGTGCTTGCAATCGTATTCTC
GAATCAATGCACCGTGGTTCCATGTACAGTTACAGTTCGTGTAATGAATT
TACGTCGTGCTTCTTGGATCGTCTTTGTGGCATCACGGTCGCCGTGTTGT
GTCGACCCCACAGCATGCTCACACGGGCATCCTCGTGGCTCTCCCCGCTC
TCTCGAAACATCGAAACATGCATGCGGCAGTATGTTTTACCAACACATAT
CGACTTTACCGTAGTGCGCACATGCTGCTTCCTCGCCTCAAGCCCCTTTT
CTCACGATCGTGCTGAATGGCAAATGTTTGCAGCACCCAGAGGCGCTTGC
CCGGAACCACGACCAGCATCTGCACGAAGGACTCAACGCTGCCTGGAACG
AGATAAATGCCAGGAGCCGCCAAGCGGTCGTGGGCCAACCCGCCCACCTC
TCCGCTTCTGTTTCCGTTGTGTAAAACGGTTGATTCAGAGGAGAGGCCAC
GCCGTGAACCGGTGATTTCTGCTGTACAGCATTTGTCATGGGAGGTCTCG
GCGACAGTTTCTGCTAAAACCTTGCTATGTGTCCGCCGGAGAAGGCAATA
CAATTTGTCGAAGTCGCATTCCTTGGTTCACGGAGGCCACTATCGAAGCA
ATAACGAGTGTTGTGCTCGCGCTGAGACGTAGATGACGAACGTAGGGCTT
GTCGGCGGAAATATAGCGTGACTGTTTGTGGATTACTGCTGTGCTCAGGA
TCGTGGTTACTGGGCTCTCCTTGCTGGCAGCTACACTTTCGTCGATTGAG
CTTTCACACTGTCAGCATACGTTCAGACATCCGTCCTTTTTTCAGGTGAG
AAGAGCCGGCTCCCTCACTATTTTCATATGCCAGCAAAACAGCGTACCAA
GCTCAGAAAACGCAGGATTTATATACAGTAGGTGCAGCGTTTTCCTACAG
CTCGCCTTGAGGATCGACAACTACTATTATTATGCTGCCGCATACAGTAG
GTTAATATCGTAGGGAGAGCTTGCTGCCCATGGGGAAGGGAGTCTGCAAG
AAGAGTGCAGGAAAAATCGTGAAAATCGGGCAGTGCTTCGCTTGATCCAC
ATATTGTTGTAACTGCGGGGCTCGTGATGATGTGGTAAATGCTACAAGTA
TATACAATTTAGCACTGCAAGGTTATGAGGCGTTGGGCTCTTAGCGTCGA
GAGCCTCTATGCGGAAGTGGGCGCGCTAACATGTAGGCTGAGAGTTGAAA
CTAGAATGACCTTGCGCTAAGGTTGCGACTAGTTCCGCGTTGCCGTGTCC
TCTGCCTCGATGTTCAGTAGAGGTGTGGTGTTGGGCAGGAAAAAAAGAAT
CCCAGCACCACAAAAAGGAGCCCTCCTTATTGTTTTCTTCTTTTTGCCAT
GATGATAATTATTGTTTTATTTTGGGCCAAAATGTGCCAAATTGTAAAGT
ATTGTACCAAACGTTGGAGGTTTTTTTTTACAAGCTGACCTACGTGTAGG
TTTACCAAGGTGGAGCGGGAGAAGTAAAAAATAAGGGTCTCAAAGGTTGC
GCGGGTTACTCTGTATTTTAAACGGGATCCGTCCGAAGAACAGGAGTACG
GATAAAGAAGTAAAGGTCGCTGGATTGCTGGAGGAACTGAGGTTCCAGAA
TTCGGATTACTTCGCAGGGAGTAAGAGCACTATAATAATAGTTTGACACC
TAAATGTGCTTCAAGGAATGCATGACTTTTTATGCTCGGACCCGACTGGT
CACTGATGCGGACGCGCTGAACTTGATTGAGTCTAAACCGTGTGGAGAGC
GTCGGCGGCGAATCTCACGCGTATCGTGAAGGCTGCAAGTTTTTTGCGGA
CCGCGGCGCAAATAATATGTAATAGTGTACGGTATATACTATGTGGAACT
TTTTTGCCAAGGTGCGAGGGGGCACCATGTACACTACTGTTGAGTTGCTG
CATAATAGAAAAGGAGACAGACTAAAATCACTCAAATCTCGCCGAGAGTC
GAAACTGGCGACATCCGAAGAGCTCGTCACCTGTTTGTTGTGTACAAAGT
CCCCCCCAGAGTTCTTTTGTTTTCACTTCAGATACATTTCTTGCGCGGCG
ACTTTATTCTTGACAAGAACAAAACTAAGGTACTGTGTAACCAACCGTTA
CTACGATAAATTGGGGGGAAAAAAAGAGCCCAGAAGCACCAGGCAACAGG
AGAAGGGCCAACAGGGCTTTCGATCGGCGCTTTGCTTTTGTTTGCGTGGG
AGGATCGA
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Coding sequence (CDS) from alignment at S-dermatodea_contig8907:2009..7166+

>mRNA_S-dermatodea_contig8907.17003.1 ID=mRNA_S-dermatodea_contig8907.17003.1|Name=mRNA_S-dermatodea_contig8907.17003.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1128bp|location=Sequence derived from alignment at S-dermatodea_contig8907:2009..7166+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCCTGGCTCGTCCGTTCCACCATAATCTTAGGGACGGCGCGGTTGTT
GTGGATCCTTGTCGCGGCTGTCGCTTCTCTAGGGGCTTTCGTCGCTCTCG
AGTCCGTCACCGCGCCGGATGGCACGTCCTACCGCGCGGTAAACTGCTTC
AACCCCTTGGGGTTTATGGATAAGGTCTACCCCGGCACTGCCCTCTTGGC
TGGCGGAGCGACTCCACCTGGCCCTTCGTGCATATGCAGCGGTCAGAAGA
TTTCAGACATGCCCTGGCTCGTCCGTTCCACCATAATCTTAGGGACGGCG
CGGTTGTTGTGGATCCTTGTCGCGGCTGTCGCTTCTCTAGGGGCTTTCGT
CGCTCTCGAGTCCGTCACCGCGCCGGATGGCACGTCCTACCGCGCGGTAA
ACTGCTTCAACCCCTTGGGGTTTATGGATAAGGTCTACCCCGGCACTGCC
CTCTTGGCTGGCGGAGCGACTCCACCTGGCCCTTCGTGCATATGCAGCGG
TCAGAAGATTTCAGACGAAGAATGCGAGTTCAGTGGTCTCGGTATTCCCT
TCGCGGTCTTGGGGGTTATCAGCCTGGTCTGGGGCGCCGCCGTTTTCAGT
AACATGATCACGTGCACCGTGAGCGGCGCGGTGGCTTCCTGGTGGTTCAC
GCCTGACCGCAGCTCTGCTGCAGTCAAGGGAGCGTTCTACCGCGCCACTC
ACTCTTCTTTCGGGAAGAATGCGAGTTCAGTGGTCTCGGTATTCCCTTCG
CGGTCTTGGGGGTTATCAGCCTGGTCTGGGGCGCCGCCGTTTTCAGTAAC
ATGATCACGTGCACCGTGAGCGGCGCGGTGGCTTCCTGGTGGTTCACGCC
TGACCGCAGCTCTGCTGCAGTCAAGGGAGCGTTCTACCGCGCCACTCACT
CTTCTTTCGGAACCCTTTGTAAGGCCGCCCTGGGGCAGAGCGCGTTGGGA
GTGGTGCGGCTGCTGGCACAGCTTGTTCATCCTGCCCGGCGGGTGTGCCC
TCCTCGCGTGCTTGGGTGAAACCCTTTGTAAGGCCGCCCTGGGGCAGAGC
GCGTTGGGAGTGGTGCGGCTGCTGGCACAGCTTGTTCATCCTGCCCGGCG
GGTGTGCCCTCCTCGCGTGCTTGGGTGA
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