mRNA_S-dermatodea_contig890.17000.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig890.17000.1
Unique NamemRNA_S-dermatodea_contig890.17000.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig890.17000.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 8.510e-16
Identity = 62/167 (37.13%), Postives = 93/167 (55.69%), Query Frame = 1
Query:    7 LHLACAHRSPEAVLALLRHGAESNLLDRNMYSPLHHAAKNCNAGVVNALLTAGAAVNLRSSRPDES-SALELAASVGNDDVVRALIRHGADVNDCNWAGYTAMGAAASSNKESVLNILIEAGAKLEFEDNM-WSPIHRACRRGSLEVVLALLRHGVDVHRMNPGGHT 501
            LH+A +      V  LL  GA+ N LD    +PLH A +N +   V ALL A    ++R    + S S L+LAA  G+  V+RA+++HG DVN     GYT++  AA +N+ + +++L+EAGA +E ED+   +P   AC     E  LAL +HG ++   +  G T
Sbjct:   42 LHVAASQGQEGRVATLLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKGDACVLRAILQHGVDVNR-RTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGET 207          
BLAST of mRNA_S-dermatodea_contig890.17000.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 3.200e-15
Identity = 59/167 (35.33%), Postives = 91/167 (54.49%), Query Frame = 1
Query:    7 LHLACAHRSPEAVLALLRHGAESNLLDRNMYSPLHHAAKNCNAGVVNALLTAGAAVNLRSSRPDES-SALELAASVGNDDVVRALIRHGADVNDCNWAGYTAMGAAASSNKESVLNILIEAGAKLEFEDNM-WSPIHRACRRGSLEVVLALLRHGVDVHRMNPGGHT 501
            LH++ +      V  LL  GA+ N LD    +PLH A +N +   V ALL A    ++     + S S L+ AA  G+  V+RA+++HG DVN     GYT++  AA +N+ + +++L+EAGA +E ED+   +P   AC     E  LAL +HG ++   +  G T
Sbjct:   91 LHVSASQGQEVRVATLLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSYSVLDFAAQKGDACVLRAILQHGVDVNR-RTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGET 256          
BLAST of mRNA_S-dermatodea_contig890.17000.1 vs. uniprot
Match: UPI001B7F34FE (transient receptor potential cation channel subfamily A member 1-like n=4 Tax=Acipenseroidei TaxID=186622 RepID=UPI001B7F34FE)

HSP 1 Score: 77.8 bits (190), Expect = 3.420e-12
Identity = 81/313 (25.88%), Postives = 136/313 (43.45%), Query Frame = 1
Query:    1 TPLHLACAHRSPEAVLALLRHGAESNLLDRNMYSPLHHAAKNCNAGVVNALLTAGAAVNLRSSRPDESSALELAASVGNDDVVRALIRHGADVNDCNWAGYTAMGAAASSNKESVLNILIEAGAKL--------EFEDNMWS-PIHRACRRGSLEVVLALLRHGVDVHRMNPGGHTAXXXXXXXXXXXXXXXXXXXXXNVNDTDADTGSSPLMSAIQGGQVDAVKALLKY---GADVTYSDDHLSTTLKEAVCAKKFMVEMINALAGAGADVDARDPHNCWTPLHHASLLDRSEAVRVLVFYGANKDMVDAKG 903
            TPLHLA  ++  E+   LL  GA+ N+L+ N+ SPLH A    +  +V  LL+  + V++       ++ + LA S+ N + +  L+ HGA +   N  G+ A+ AAA +  +  + I+++ G +L         + D   S P+H A   G++EV+   + +G  +                                  D      S+ L  A   G ++AVK +L     G DV    D    TL          VE++  L   GA++D+ D  +  +PL  A+       V +L++ GAN  + D+ G
Sbjct:   96 TPLHLAVKNKQSESCRTLLELGADPNILNTNLMSPLHMAINLRHNEIVEVLLS-HSNVDMNLEGDLGNTPVMLACSIDNHEALNLLLTHGAHLRRQNKLGHFAIHAAAFTGSKKCMEIVLKKGEELGHQIERHINYVDKSGSSPLHLAVHGGNIEVIQLCIANGAKI----------------------------------DLQQSDKSTALHFACTQGAIEAVKLMLSTYNGGLDVVNLIDGAHQTLLHKATMFDH-VELVEYLLVKGANIDSLDCES-HSPLVLATACGAWRTVELLIWRGANVKLKDSCG 371          
BLAST of mRNA_S-dermatodea_contig890.17000.1 vs. uniprot
Match: UPI001F081087 (transient receptor potential cation channel subfamily A member 1a isoform X1 n=2 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F081087)

HSP 1 Score: 76.6 bits (187), Expect = 8.370e-12
Identity = 67/243 (27.57%), Postives = 108/243 (44.44%), Query Frame = 1
Query:    1 TPLHLACAHRSPEAVLALLRHGAESNLLDRNMYSPLHHAAKNCNAGVVNALLT-AGAAVNLRSSRPDESSALELAASVGNDDVVRALIRHGADVNDCNWAGYTAMGAAASSNKESVLNILIEAG--------AKLEFEDNMW-SPIHRACRRGSLEVVLALLRHGVDVHRMNPGGHTAXXXXXXXXXXXXXXXXXXXXXNVND----TDADTGSSPLMSAIQGGQVDAVKALLKYGADVTYSD 687
            TPLH A      E++L LL  GA+ NLL++ + SPLH A       +V+ LL+ +G   NL     +  + L LA SV N   ++ L +HGA +   N  G+  + AAA +  +  + ++++ G        + + + D  + SP+H A R G+LEV+   + HG  + +      TA                      V D    TD     +PL  A      +  + L+  GAD+ + D
Sbjct:  129 TPLHWAVQRNQKESLLCLLEKGADPNLLNQGLMSPLHLAVNQTYNTLVHLLLSHSGTDANLEGDLGN--TPLMLACSVNNHKALQILFKHGAKLCQQNKLGHYPIHAAAFAGAKQSMQVILQEGDATGHSIDSHINYVDKFYCSPLHLAVRGGNLEVIKMCIDHGARIDQQQCDKSTALHFACNQGAMEAVKLMLSSYDRVCDVINITDG-ASQTPLHKATIFDHFELAEYLISKGADINFID 368          
BLAST of mRNA_S-dermatodea_contig890.17000.1 vs. uniprot
Match: A0A674AK88_SALTR (Transient receptor potential cation channel subfamily A member 1-like n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A674AK88_SALTR)

HSP 1 Score: 75.1 bits (183), Expect = 2.750e-11
Identity = 77/319 (24.14%), Postives = 138/319 (43.26%), Query Frame = 1
Query:    4 PLHLACAHRSPEAVLALLRHGAESNLLDRNMYSPLHHAAKNCNAGVVNALLTA-GAAVNLRSSRPDESSALELAASVGNDDVVRALIRHGADVNDCNWAGYTAMGAAASSNKESVLNILIEAGAKL--------EFEDNMWS-PIHRACRRGSLEVVLALLRHGVDVHRMNPGGHTAXXXXXXXXXXXXXXXXXXXXXNVNDT-DADTGS--SPLMSAIQGGQVDAVKALLKYGADVTYSDDHLSTTLKEAVCAKKFMVEMINALAGAGA--DVDARDPHNCWTPLHHASLLDRSEAVRVLVFYGANKDMVDAKGRSPL 915
            PLH A     P++   LL  GAE N+L++ + SPLH A  + +  +V  LL+      NL     +  + + LA  + N + +  L+RHGA ++  N  G+ A+ AAA +  +  ++++++AG ++         F D  WS P+H A   G++ ++   +  G  + +    G TA                      ++   +   G+  +PL     G Q+  V  LL  GA+V   D      L   +   K +  +   +    +  D+ + + H   TPLH+A  L   E+V+ ++    + D      +S L
Sbjct:  285 PLHWAVERNQPDSCRTLLELGAEPNVLNKALMSPLHLAVSHTHNHLVQLLLSHYKTGSNLEGGLGN--TPVMLACFINNTEALSILLRHGARLSSQNKLGHYAIHAAAFAGSKKAMDVILKAGEEMGHSIEEHINFLDKSWSSPLHLAVWGGNMNIIEFCIHKGAKIDQQQVDGSTALHLACSQGATEAVKLILSSYIRLDSIINLPDGACQTPLHRLPFGTQL-TVALLLSKGANVNIKDKSGCNFLHLTILQPKGLKNLSRDILQHSSVKDLLSNEDHKGCTPLHYACRLGIHESVKNILVLQVSLDRKSKDKKSAL 600          
BLAST of mRNA_S-dermatodea_contig890.17000.1 vs. uniprot
Match: A0A674AL88_SALTR (Transient receptor potential cation channel subfamily A member 1-like n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A674AL88_SALTR)

HSP 1 Score: 75.1 bits (183), Expect = 2.750e-11
Identity = 83/325 (25.54%), Postives = 143/325 (44.00%), Query Frame = 1
Query:    4 PLHLACAHRSPEAVLALLRHGAESNLLDRNMYSPLHHAAKNCNAGVVNALLTA-GAAVNLRSSRPDESSALELAASVGNDDVVRALIRHGADVNDCNWAGYTAMGAAASSNKESVLNILIEAGAKL--------EFEDNMWS-PIHRACRRGSLEVVLALLRHGVDVHRMNPGGHTAXXXXXXXXXXXXXXXXXXXXXNVNDT-DADTGS--SPLMSAIQGGQVDAVKALLKYGADVTYSD-DHLSTTLKEAVCAKKFMVEMINALAGAGADVDARDPHNC----WTPLHHASLLDRSEAVRVLVFYGANKDMV---DAKGRSPL 915
            PLH A     P++   LL  GAE N+L++ + SPLH A  + +  +V  LL+      NL     +  + + LA  + N + +  L+RHGA ++  N  G+ A+ AAA +  +  ++++++AG ++         F D  WS P+H A   G++ ++   +  G  + +    G TA                      ++   +   G+  +PL  A      +  + L+  GAD+ Y D   LS  L    C     V +   L   GA+V+ +D   C     T L    L + S   R ++ + + KD++   D KG +PL
Sbjct:  284 PLHWAVERNQPDSCRTLLELGAEPNVLNKALMSPLHLAVSHTHNHLVQLLLSHYKTGSNLEGGLGN--TPVMLACFINNTEALSILLRHGARLSSQNKLGHYAIHAAAFAGSKKAMDVILKAGEEMGHSIEEHINFLDKSWSSPLHLAVWGGNMNIIEFCIHKGAKIDQQQVDGSTALHLACSQGATEAVKLILSSYIRLDSIINLPDGACQTPLHRATIFDHTELAEYLISKGADIDYIDCKGLSPLLLATNCGAWRTVAL---LLSKGANVNIKDKSGCNFLHLTILQPKGLKNLS---RDILQHSSVKDLLSNEDHKGCTPL 600          
BLAST of mRNA_S-dermatodea_contig890.17000.1 vs. uniprot
Match: A0A674AHS0_SALTR (Transient receptor potential cation channel subfamily A member 1-like n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A674AHS0_SALTR)

HSP 1 Score: 75.1 bits (183), Expect = 2.760e-11
Identity = 83/325 (25.54%), Postives = 143/325 (44.00%), Query Frame = 1
Query:    4 PLHLACAHRSPEAVLALLRHGAESNLLDRNMYSPLHHAAKNCNAGVVNALLTA-GAAVNLRSSRPDESSALELAASVGNDDVVRALIRHGADVNDCNWAGYTAMGAAASSNKESVLNILIEAGAKL--------EFEDNMWS-PIHRACRRGSLEVVLALLRHGVDVHRMNPGGHTAXXXXXXXXXXXXXXXXXXXXXNVNDT-DADTGS--SPLMSAIQGGQVDAVKALLKYGADVTYSD-DHLSTTLKEAVCAKKFMVEMINALAGAGADVDARDPHNC----WTPLHHASLLDRSEAVRVLVFYGANKDMV---DAKGRSPL 915
            PLH A     P++   LL  GAE N+L++ + SPLH A  + +  +V  LL+      NL     +  + + LA  + N + +  L+RHGA ++  N  G+ A+ AAA +  +  ++++++AG ++         F D  WS P+H A   G++ ++   +  G  + +    G TA                      ++   +   G+  +PL  A      +  + L+  GAD+ Y D   LS  L    C     V +   L   GA+V+ +D   C     T L    L + S   R ++ + + KD++   D KG +PL
Sbjct:  285 PLHWAVERNQPDSCRTLLELGAEPNVLNKALMSPLHLAVSHTHNHLVQLLLSHYKTGSNLEGGLGN--TPVMLACFINNTEALSILLRHGARLSSQNKLGHYAIHAAAFAGSKKAMDVILKAGEEMGHSIEEHINFLDKSWSSPLHLAVWGGNMNIIEFCIHKGAKIDQQQVDGSTALHLACSQGATEAVKLILSSYIRLDSIINLPDGACQTPLHRATIFDHTELAEYLISKGADIDYIDCKGLSPLLLATNCGAWRTVAL---LLSKGANVNIKDKSGCNFLHLTILQPKGLKNLS---RDILQHSSVKDLLSNEDHKGCTPL 601          
BLAST of mRNA_S-dermatodea_contig890.17000.1 vs. uniprot
Match: A0A1F5L0K9_9EURO (Uncharacterized protein n=1 Tax=Penicillium arizonense TaxID=1835702 RepID=A0A1F5L0K9_9EURO)

HSP 1 Score: 73.9 bits (180), Expect = 4.640e-11
Identity = 80/288 (27.78%), Postives = 131/288 (45.49%), Query Frame = 1
Query:    4 PLHLACAHRSPEAVLALLRHGAESNLLDRNMYSPLHH--AAKNCNAGVVNALLTAGAAVNLRSSRPDESSALELAASVGNDDVVRALIRHGADVNDCN----WAGYTAMGAAASS------NKESVLNILIEAGAKLEFEDNMW-SPIHRACRRGSLEVVLALLRHGVDVHRMNPGGHTAXXXXXXXXXXXXXXXXXXXXXNVNDTDADTGSSPLMSAIQGGQVDAVKALLKYGADVTYSDDHLSTTLKEAVCAKKFMVEMINALAGAGADVDARDPHNCWTPLHHAS 828
            PL  A        V  LL+HGA++++LDR     L H  A+KN   G++N LL++G  V L S      + L++AA       VR L+  GA+ N  N    W G++A+  AA++       ++S++  L   GA+L+  ++   +P+H A  +G+++   AL+  G  +   +  G T                            A + SS   S      ++ V+ LL  GADV + ++   T L  AV  +   +E    L   G+  D+RD  N  +PLH+A+
Sbjct:  156 PLREAVRSNQESKVALLLKHGADTHILDRRTGMTLVHIAASKNATPGIINILLSSG--VQLESQDNMGRTPLQVAADHSCTRAVRLLLNLGANPNFKNNNQYWKGWSALFYAATNPSIPGNGRKSIIRALFLHGAELDGRNHAQKTPLHHAISKGAIKQAQALVECGASIMATDANGDTVLHI------------------------AASSSSWCPS------MECVRKLLLLGADVQFRNNDGLTPLSLAV--RMGSIEATKILLEHGSCADSRDK-NGKSPLHYAA 408          
BLAST of mRNA_S-dermatodea_contig890.17000.1 vs. uniprot
Match: A0A1L7XZ02_9HELO (AAA domain-containing protein n=1 Tax=Phialocephala subalpina TaxID=576137 RepID=A0A1L7XZ02_9HELO)

HSP 1 Score: 73.9 bits (180), Expect = 6.830e-11
Identity = 75/256 (29.30%), Postives = 114/256 (44.53%), Query Frame = 1
Query:    7 LHLACAHRSPEAVLALLRHGAESNL----------LDRNMYSPLHHAAKNCNAGVVNALLTAGAAV--------NLRSSRPDESSALELAASVGNDDVVRALIRHGADVNDCNWAGYTAMGAAASSNKESVLNILIEAGAKLEFEDNMWSPIH------RACRRGSLEVVLALLRHGVDVH----RMNPGGHTAXXXXXXXXXXXXXXXXXXXXXNVNDTDADTG-----SSPLMSAIQGGQVDAVKALLKYGADV 675
            LHLA AH+    V ALL   A+ +L          ++R   SPL HA+   N G+   LL  GA +        NL   R   ++ L  AA  G+  ++  L+  GA++++ ++ G TA+  AA      V+N+LI+ GA    E  + + I        A + GS E++  +L++GVD++    R NP                          NVN  +         S PL +AI+  QVD V  LL +GAD+
Sbjct: 1004 LHLAIAHQDTTMVKALLEADADPDLCVYYFEKAGSINRRWKSPLAHASAIGNIGIARDLLYYGANIENQYVTADNLEGVRFKYTTPLIEAAINGDRQMIEYLLESGAEIDNYDFTGRTALATAARHANLEVVNLLIQKGASTNLETKLPNYISIASLAVEAVKGGSHEILEVILKNGVDLNQSAQRRNP-----LVVAIKSKEPAMVKMLIENGANVNGEERSRRELGWPSIPLCTAIRTDQVDVVDILLAHGADI 1254          
BLAST of mRNA_S-dermatodea_contig890.17000.1 vs. uniprot
Match: UPI0019007D59 (transient receptor potential cation channel subfamily A member 1-like n=1 Tax=Salvelinus namaycush TaxID=8040 RepID=UPI0019007D59)

HSP 1 Score: 73.6 bits (179), Expect = 8.840e-11
Identity = 84/331 (25.38%), Postives = 141/331 (42.60%), Query Frame = 1
Query:    4 PLHLACAHRSPEAVLALLRHGAESNLLDRNMYSPLHHAAKNCNAGVVNALLTAGAAVNLRSSRPDESSALE---------LAASVGNDDVVRALIRHGADVNDCNWAGYTAMGAAASSNKESVLNILIEAGAKLE---------FEDNMWSPIHRACRRGSLEVVLALLRHGVDVHRMNPGGHTAXXXXXXXXXXXXXXXXXXXXXNVNDT-DADTGS--SPLMSAIQGGQVDAVKALLKYGADVTYSD-DHLSTTLKEAVCAKKFMVEMINALAGAGADVDARDPHNCWTPLHHASLLDRS--EAVRVLVFYGANKDMV---DAKGRSPL 915
            PLH A     P++  ALL  GAE N+L++ + SPLH A            LT    V L  S     S LE         LA S+ N + +  L+RHGA ++  N  G+ A+ AAA +  +  ++++++AG ++           + +  SP+H A R G+++++   +  G  + +      TA                      ++   +   G+  +PL  A      +  + L+  GAD+ Y D   LS  L    C     V +   L   GA+V+ +D   C   LH A L  +      R ++ + + KD++   D +G +PL
Sbjct:  106 PLHWAVERNQPDSCRALLELGAEPNVLNKALMSPLHLAVS----------LTHNHLVQLLLSHYKTESNLEGGLGNTPVMLACSINNTEALSILLRHGARLSSQNKLGHYAIHAAAFAGSKKAIDVILKAGEEMGHSIEEHINFLDKSCSSPLHLAVRGGNMDIIEFCIHKGAKIDQQQVDRSTALHFACSQGATEAVKLMLSSYSRLDSIINLPDGACQTPLHRATIFDHTELTEYLISKGADIDYIDCKGLSPLLLATNCGAWRTVAL---LLSKGANVNIKDKSGC-NFLHLAILQPKGLKNLSRDILQHSSVKDLLSNEDNEGCTPL 422          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig890.17000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6X8_ECTSI8.510e-1637.13Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KNU3_9PHAE3.200e-1535.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001B7F34FE3.420e-1225.88transient receptor potential cation channel subfam... [more]
UPI001F0810878.370e-1227.57transient receptor potential cation channel subfam... [more]
A0A674AK88_SALTR2.750e-1124.14Transient receptor potential cation channel subfam... [more]
A0A674AL88_SALTR2.750e-1125.54Transient receptor potential cation channel subfam... [more]
A0A674AHS0_SALTR2.760e-1125.54Transient receptor potential cation channel subfam... [more]
A0A1F5L0K9_9EURO4.640e-1127.78Uncharacterized protein n=1 Tax=Penicillium arizon... [more]
A0A1L7XZ02_9HELO6.830e-1129.30AAA domain-containing protein n=1 Tax=Phialocephal... [more]
UPI0019007D598.840e-1125.38transient receptor potential cation channel subfam... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig890contigS-dermatodea_contig890:14366..15283 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score119.8
Seed ortholog evalue2.3e-24
Seed eggNOG ortholog2880.D8LJC1
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size918
Cds size918
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925372.263244-CDS-S-dermatodea_contig890:14365..152831622925372.263244-CDS-S-dermatodea_contig890:14365..15283Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig890 14366..15283 -
1694079888.7889836-CDS-S-dermatodea_contig890:14365..152831694079888.7889836-CDS-S-dermatodea_contig890:14365..15283Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig890 14366..15283 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig890.17000.1prot_S-dermatodea_contig890.17000.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig890 14366..15283 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig890.17000.1

>prot_S-dermatodea_contig890.17000.1 ID=prot_S-dermatodea_contig890.17000.1|Name=mRNA_S-dermatodea_contig890.17000.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=306bp
TPLHLACAHRSPEAVLALLRHGAESNLLDRNMYSPLHHAAKNCNAGVVNA
LLTAGAAVNLRSSRPDESSALELAASVGNDDVVRALIRHGADVNDCNWAG
YTAMGAAASSNKESVLNILIEAGAKLEFEDNMWSPIHRACRRGSLEVVLA
LLRHGVDVHRMNPGGHTAIHVAAWQGSIAVLDALLAAGANVNDTDADTGS
SPLMSAIQGGQVDAVKALLKYGADVTYSDDHLSTTLKEAVCAKKFMVEMI
NALAGAGADVDARDPHNCWTPLHHASLLDRSEAVRVLVFYGANKDMVDAK
GRSPL*
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mRNA from alignment at S-dermatodea_contig890:14366..15283-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig890.17000.1 ID=mRNA_S-dermatodea_contig890.17000.1|Name=mRNA_S-dermatodea_contig890.17000.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=918bp|location=Sequence derived from alignment at S-dermatodea_contig890:14366..15283- (Saccorhiza dermatodea SderLu1190fm monoicous)
ACGCCGCTTCACTTGGCGTGTGCACACCGATCGCCCGAGGCCGTGCTAGC CTTGTTGCGGCACGGAGCGGAATCAAACTTGTTGGACCGTAATATGTACT CGCCCCTGCACCATGCTGCCAAGAACTGTAACGCTGGTGTCGTAAACGCG CTTCTCACCGCCGGGGCAGCGGTCAATCTTCGCAGCAGCCGTCCTGACGA ATCCTCAGCGCTGGAACTGGCAGCTTCGGTTGGGAATGACGATGTCGTAC GAGCGCTTATCCGACATGGGGCGGACGTGAACGACTGTAACTGGGCCGGT TACACGGCCATGGGCGCTGCTGCATCCTCTAACAAGGAATCCGTGCTCAA CATTCTCATCGAGGCCGGTGCCAAGTTAGAGTTCGAGGATAATATGTGGT CCCCTATCCACCGGGCTTGCCGACGTGGCTCCCTCGAAGTCGTACTCGCC CTTCTTCGGCATGGGGTCGATGTACACAGGATGAATCCCGGCGGGCACAC GGCGATCCACGTGGCGGCATGGCAGGGCTCTATTGCTGTCTTGGATGCTC TGCTGGCGGCCGGCGCGAACGTCAATGATACAGACGCGGACACCGGATCC TCGCCGCTGATGTCGGCCATTCAAGGTGGACAAGTGGATGCTGTGAAAGC GCTACTCAAGTACGGTGCGGATGTGACCTATTCTGATGACCACTTGTCCA CAACTTTGAAAGAAGCCGTATGTGCTAAGAAGTTTATGGTCGAGATGATC AACGCTCTTGCCGGGGCCGGCGCTGACGTCGATGCTCGTGATCCTCACAA TTGCTGGACGCCTCTGCACCACGCATCCTTACTAGATCGCTCCGAGGCGG TTCGCGTCTTGGTTTTTTATGGGGCAAACAAGGATATGGTTGATGCGAAA GGCCGCTCGCCACTATAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig890:14366..15283-

>mRNA_S-dermatodea_contig890.17000.1 ID=mRNA_S-dermatodea_contig890.17000.1|Name=mRNA_S-dermatodea_contig890.17000.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1836bp|location=Sequence derived from alignment at S-dermatodea_contig890:14366..15283- (Saccorhiza dermatodea SderLu1190fm monoicous)
ACGCCGCTTCACTTGGCGTGTGCACACCGATCGCCCGAGGCCGTGCTAGC
CTTGTTGCGGCACGGAGCGGAATCAAACTTGTTGGACCGTAATATGTACT
CGCCCCTGCACCATGCTGCCAAGAACTGTAACGCTGGTGTCGTAAACGCG
CTTCTCACCGCCGGGGCAGCGGTCAATCTTCGCAGCAGCCGTCCTGACGA
ATCCTCAGCGCTGGAACTGGCAGCTTCGGTTGGGAATGACGATGTCGTAC
GAGCGCTTATCCGACATGGGGCGGACGTGAACGACTGTAACTGGGCCGGT
TACACGGCCATGGGCGCTGCTGCATCCTCTAACAAGGAATCCGTGCTCAA
CATTCTCATCGAGGCCGGTGCCAAGTTAGAGTTCGAGGATAATATGTGGT
CCCCTATCCACCGGGCTTGCCGACGTGGCTCCCTCGAAGTCGTACTCGCC
CTTCTTCGGCATGGGGTCGATGTACACAGGATGAATCCCGGCGGGCACAC
GGCGATCCACGTGGCGGCATGGCAGGGCTCTATTGCTGTCTTGGATGCTC
TGCTGGCGGCCGGCGCGAACGTCAATGATACAGACGCGGACACCGGATCC
TCGCCGCTGATGTCGGCCATTCAAGGTGGACAAGTGGATGCTGTGAAAGC
GCTACTCAAGTACGGTGCGGATGTGACCTATTCTGATGACCACTTGTCCA
CAACTTTGAAAGAAGCCGTATGTGCTAAGAAGTTTATGGTCGAGATGATC
AACGCTCTTGCCGGGGCCGGCGCTGACGTCGATGCTCGTGATCCTCACAA
TTGCTGGACGCCTCTGCACCACGCATCCTTACTAGATCGCTCCGAGGCGG
TTCGCGTCTTGGTTTTTTATGGGGCAAACAAGGATATGGTTGATGCGAAA
GGCCGCTCGCCACTATAGACGCCGCTTCACTTGGCGTGTGCACACCGATC
GCCCGAGGCCGTGCTAGCCTTGTTGCGGCACGGAGCGGAATCAAACTTGT
TGGACCGTAATATGTACTCGCCCCTGCACCATGCTGCCAAGAACTGTAAC
GCTGGTGTCGTAAACGCGCTTCTCACCGCCGGGGCAGCGGTCAATCTTCG
CAGCAGCCGTCCTGACGAATCCTCAGCGCTGGAACTGGCAGCTTCGGTTG
GGAATGACGATGTCGTACGAGCGCTTATCCGACATGGGGCGGACGTGAAC
GACTGTAACTGGGCCGGTTACACGGCCATGGGCGCTGCTGCATCCTCTAA
CAAGGAATCCGTGCTCAACATTCTCATCGAGGCCGGTGCCAAGTTAGAGT
TCGAGGATAATATGTGGTCCCCTATCCACCGGGCTTGCCGACGTGGCTCC
CTCGAAGTCGTACTCGCCCTTCTTCGGCATGGGGTCGATGTACACAGGAT
GAATCCCGGCGGGCACACGGCGATCCACGTGGCGGCATGGCAGGGCTCTA
TTGCTGTCTTGGATGCTCTGCTGGCGGCCGGCGCGAACGTCAATGATACA
GACGCGGACACCGGATCCTCGCCGCTGATGTCGGCCATTCAAGGTGGACA
AGTGGATGCTGTGAAAGCGCTACTCAAGTACGGTGCGGATGTGACCTATT
CTGATGACCACTTGTCCACAACTTTGAAAGAAGCCGTATGTGCTAAGAAG
TTTATGGTCGAGATGATCAACGCTCTTGCCGGGGCCGGCGCTGACGTCGA
TGCTCGTGATCCTCACAATTGCTGGACGCCTCTGCACCACGCATCCTTAC
TAGATCGCTCCGAGGCGGTTCGCGTCTTGGTTTTTTATGGGGCAAACAAG
GATATGGTTGATGCGAAAGGCCGCTCGCCACTATAG
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