mRNA_S-dermatodea_contig8894.16994.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8894.16994.1
Unique NamemRNA_S-dermatodea_contig8894.16994.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig8894.16994.1 vs. uniprot
Match: D8LQ25_ECTSI (Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LQ25_ECTSI)

HSP 1 Score: 879 bits (2271), Expect = 2.330e-315
Identity = 467/530 (88.11%), Postives = 488/530 (92.08%), Query Frame = 1
Query:    1 MVTKRKGRYVADGVTAKGKARTEKANLVNMLRAKEAALAVRXXXXXXXXXXXXXXXXXXXXKQQ*QEADADIRTPQQEVREAEAAKQRNELAHRTGALLDISQSRGIPLTYFELVQSGVDPNNAVHRAASTFRVGKDKVFKVRAHWWEKNDFLTSSAGGRGVSSGKADGRKLLDDVQCASLRAFISDKHENGQQVFRRTVGEWVKDKCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTREEKEEAVIVYIDESFCHQLHGSAYSYFFTDEDGVVQDGMGRTSGKGLRMIMVHAITKGGALAALDGNNFPIPEGWFKRKDKGKGRQGAGSMGTEETAEMLWQAKLATGVYRDAMTDKMFVEWLERRLAPAFKAKFGDKKMILVLDNASYHHGYDAEVRVPESNTKGYNTELLRKYKCKKIAVEREVTGSAGVESKKYTFKVPATGTFPQVNSKCGKGVSSPEVALATRALFQLKHPTKLMEKVEKFMNARGWQLIWTPPYMPSFQPIELFW 1590
            MVTKRKGRYVA GVTAKGK RTEKANL NMLRAKEAALAV XXXXXXXXXXXXXXXXXXXXKQQ Q  +AD   PQQE RE +AA+QR++LA RTG+LLD SQSR I LTYFELVQSGV+PN AV R AST RVGKDKVFKVRAHWWEK + LTSSA GRGVSSGK DGRKLLDDVQCA+LRAFISDKHENGQQVFRRTV EW+K+ CNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALT+EEKEEAVIVY+DESFCHQLHGSAYSYF TD+DGVVQDGMGRTSGKGLRMIMVHAITKGGALAA+D NNFPIPEGWFK KDKGKGRQGAGSMGTEETAEMLWQAK ATG Y DAMTDKMF+EWLERRLAPAFKAK+G+KKMILVLDNASYHHGYDAEV VPESN+KGYNT LLRKYKC+KI VEREVT SAGV SKKYTF+VPATGTFPQ NSKCGKGVS PEVALATRA FQLKHPTKLMEKVE FMN RGWQLIWTPPYMPSFQPIELFW
Sbjct:    1 MVTKRKGRYVATGVTAKGKTRTEKANLANMLRAKEAALAVXXXXXXXXXXXXXXXXXXXXXKQQQQGPEADTGAPQQEAREQQAAQQRDDLAPRTGSLLDTSQSRSILLTYFELVQSGVEPNKAVQRTASTLRVGKDKVFKVRAHWWEKTELLTSSAEGRGVSSGK-DGRKLLDDVQCANLRAFISDKHENGQQVFRRTVREWIKETCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTQEEKEEAVIVYMDESFCHQLHGSAYSYFLTDDDGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDENNFPIPEGWFKPKDKGKGRQGAGSMGTEETAEMLWQAKRATGDYHDAMTDKMFMEWLERRLAPAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTALLRKYKCRKITVEREVTSSAGVRSKKYTFQVPATGTFPQANSKCGKGVSGPEVALATRAFFQLKHPTKLMEKVETFMNGRGWQLIWTPPYMPSFQPIELFW 529          
BLAST of mRNA_S-dermatodea_contig8894.16994.1 vs. uniprot
Match: A0A6H5KZM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM0_9PHAE)

HSP 1 Score: 617 bits (1590), Expect = 6.900e-216
Identity = 343/407 (84.28%), Postives = 363/407 (89.19%), Query Frame = 1
Query:    1 MVTKRKGRYVADGVTAKGKARTEKANLVNMLRAKEAALAVRXXXXXXXXXXXXXXXXXXXXKQQ*QEADADIRTPQQEVREAEAAKQRNELAHRTGALLDISQSRGIPLTYFELVQSGVDPNNAVHRAASTFRVGKDKVFKVRAHWWEKNDFLTSSAGGRGVSSGKADGRKLLDDVQCASLRAFISDKHENGQQVFRRTVGEWVKDKCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTREEKEEAVIVYIDESFCHQLHGSAYSYFFTDEDGVVQDGMGRTSGKGLRMIMVHAITKGGALAALDGNNFPIPEGWFKRKDKGKGRQGAGSMGTEETAEMLWQAKLATGVYRDAMTDKMFVEWLERRLAPAFKAKFGDKKMILVLDNAS 1221
            MVTKRKGRYVA GVTAKGKARTEKANL NMLRAKEAAL VRXXXXXXXXXXXXXXXXXXXX                  RE +AA+QR++LA +TG+LLDISQSR I LTYFELVQSGV+PN AV R A+T RVGKDKVFKVRAHWWEK + L SSA GRGVSSGK DGRKLLDDVQCASLRAFISDKHENGQQVFRRTV EW+K++CNKDLSNRAVGGLLYRIGYRRR GRIKIPPLNDDRKARIRRFLVEMSAALT+EEKEEAVIVY+DESFCHQLHGSAYSYF TD++GVVQDGMGRTSGKGLRMIMVHAITKGGALAA+D NNFPIPEGWFK KDKGKGRQGAGSMGTEETAEMLWQAK ATG Y DAM DKMF+EWLERRLAPAFKAK+G+KKMI VLDNAS
Sbjct:    1 MVTKRKGRYVATGVTAKGKARTEKANLANMLRAKEAALVVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAREQQAAQQRDDLAPKTGSLLDISQSRSILLTYFELVQSGVEPNKAVQRTAATLRVGKDKVFKVRAHWWEKTELLASSAEGRGVSSGK-DGRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDLSNRAVGGLLYRIGYRRRGGRIKIPPLNDDRKARIRRFLVEMSAALTQEEKEEAVIVYMDESFCHQLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDENNFPIPEGWFKPKDKGKGRQGAGSMGTEETAEMLWQAKRATGDYHDAMKDKMFMEWLERRLAPAFKAKYGNKKMIFVLDNAS 406          
BLAST of mRNA_S-dermatodea_contig8894.16994.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE)

HSP 1 Score: 468 bits (1204), Expect = 4.420e-154
Identity = 244/444 (54.95%), Postives = 305/444 (68.69%), Query Frame = 1
Query:  271 LAHRTGALLDISQSRGIPLTYFELVQSGVDPNNAVHRAASTFRVGKDKVFKVRAHWWEKNDFLTSSAGGRGVSSGKADGRKLLDDVQCASLRAFISDKHENGQQVFRRTVGEWVKDKCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTREEKEEAVIVYIDESFCHQLHGSAYSYFFTDEDGVVQDGMGRTSGKGLRMIMVHAITKGGALAALDGNNFPIPEGWFKRKD----KGKGRQGAGSMGTEETAEMLWQAKLATGVYRDAMTDKMFVEWLERRLAPAFKAKFGDKKMILVLDNASYHHGYDAEVRVPESNTKGYNTELLRKYKCKKIAVEREVTGSAGVESKKYTFKVPATGTFPQVNSKCGKGVSSPEVALATRALFQLKHPTKLMEKVEKFMNARGWQLIWTPPYMPSFQPIELFW 1590
            L  +TG L  + QSR I + YF+LV+ G   N+A  + A T R+G DKV  VR  W++K +   ++  GRG ++   DGR+++   Q   LR FI  +HE G+QVFRRTV ++++     ++SNRAVGGLL R+G++RRRGRIKIPPLN++RK RIR FLV+M  A   E+   AVIVY+DESF HQ HGSAYSYF +D+ G+VQDG+GRT+GKGLRMIMVHAIT+ G LA L    FPI EGWFK K+    K K  +    M  E+TAE LWQAKLATG Y +AMTD MF++WL+ RL PAF A+F +KKM LVLDNASYHH +D EV+VPE+N+K YN ELLRKY C    V RE  G A     +Y F+VPA G+ P  N     GVS  E+A  TR  F+   P KL EK E +M  +GW LIWTPPYMP+FQPIELFW
Sbjct:   91 LRPKTGELTTLQQSRIILMLYFDLVKGGSSENHAKEQVAKTLRIGTDKVLAVRTLWYDKQELYETNGKGRGKATSVDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAELQ-EGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAA----EYNFEVPAQGSLPNANRN---GVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFW 526          
BLAST of mRNA_S-dermatodea_contig8894.16994.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI)

HSP 1 Score: 464 bits (1193), Expect = 5.470e-152
Identity = 252/448 (56.25%), Postives = 310/448 (69.20%), Query Frame = 1
Query:  265 NELAHRTGALLDISQSRGIPLTYFELVQSGVDPNNAVHRAASTFRVGKDKVFKVRAHWWEKNDFLTSSAGGRGVSSGKADGRKLLDDVQCASLRAFISDKHENGQQVFRRTVGEWVKDKCNKDL-SNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTREEKEEAVIVYIDESFCHQLHGSAYSYFFTDEDGVVQDGMGRTSGKGLRMIMVHAITKGGALAAL-DGNNFPIPEGWFKRKDKGKGRQGAGSMGTEETAEMLWQAKLATGVYRDAMTDKMFVEWLERRLAPAFKA--KFGDKKMILVLDNASYHHGYDAEVRVPESNTKGYNTELLRKYKCKKIAVEREVTGSAGVESKKYTFKVPAT--GTFPQVNSKCGKGVSSPEVALATRALFQLKHPTKLMEKVEKFMNARGWQLIWTPPYMPSFQPIELFW 1590
            +E+  + G +    QSR + +  F+L + G   N AV + A TF++G DKV ++  HWW+      ++A GRG  + + DGR+ L +VQ   LR FI+D+H+ G+QVFRRTV EWV   CN +  SNR+VGGLL R+GY+RRRGRIK PPLN +R ARIRRFLVEM  A   E+   AVIVY+DESF HQ HGS YSYF +DE+GVVQDG+GRT+GKGLRMIMVHAITK G LA   DG  FPI EGWFK    GK +     M  EETAE LWQAKLA G Y  AMTD MF+EWLE RL+PA+ A  +F  KKMILVLDNASYHHG+DAEV+VPE+NTK +N +LLRK+  K I V+R+      VE   + F+VP+    +FP  N +   GVS  EVA ATR   +L +P +L E+V  FM  +GW LIWTPPYMPSFQPIELFW
Sbjct:  123 HEVKPKKGEVWTHLQSRMVLMLLFDLRKEGRSENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAAGRGKMAKEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNMEQPSNRSVGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKFCDG--FPIEEGWFKETGSGKKK-----MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRKEGEQGFVE---HNFEVPSEPGSSFPAGNRE--GGVSRAEVATATREYIRLNYPERLEERVVTFMKKKGWALIWTPPYMPSFQPIELFW 558          
BLAST of mRNA_S-dermatodea_contig8894.16994.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE)

HSP 1 Score: 456 bits (1173), Expect = 1.920e-149
Identity = 249/434 (57.37%), Postives = 298/434 (68.66%), Query Frame = 1
Query:  307 QSRGIPLTYFELVQSGVDPNNAVHRAASTFRVGKDKVFKVRAHWWEKNDFLTSSAGGRGVSSGKADGRKLLDDVQCASLRAFISDKHENGQQVFRRTVGEWVKDKCNKDL-SNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTREEKEEAVIVYIDESFCHQLHGSAYSYFFTDEDGVVQDGMGRTSGKGLRMIMVHAITKGGALAAL-DGNNFPIPEGWFKRKDKGKGRQGAGSMGTEETAEMLWQAKLATGVYRDAMTDKMFVEWLERRLAPAFKA--KFGDKKMILVLDNASYHHGYDAEVRVPESNTKGYNTELLRKYKCKKIAVEREVTGSAGVESKKYTFKVPAT--GTFPQVNSKCGKGVSSPEVALATRALFQLKHPTKLMEKVEKFMNARGWQLIWTPPYMPSFQPIELFW 1590
            +SR + +  F+L + G     AV + A TF++G DKV ++  HWW+       +A GRG ++ K DGR+ L +VQ   LR FI+D+H+ G+QVFRRTV EW+   CN +  SNR+ GGLL R+GY+RRRGRIK PPLN +R ARIRRFLVEM  A   E+   AVIVY+DESF HQ HGS YSYF +DEDGVVQDG+GRT+GKGLRMIMVHAITK G LA L DG   PI EGWFK    GK       M  EETAE LWQAKLA G Y  AMTD MF+EWLE RL+PA+ A  +F  K+MILVLDNASYHHG+DAEV+VPE+NTK +N +LLR +  K I V R+  G  GV    Y F+VP     +FP  N +   GVS  EVA ATR    L HP +L E+V  FM  +GW LIWTPPYMPSFQPIELFW
Sbjct:  103 ESRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYEITAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDG--LPIEEGWFKETGSGKKE-----MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRK-EGEQGVVE--YNFEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFW 524          
BLAST of mRNA_S-dermatodea_contig8894.16994.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE)

HSP 1 Score: 448 bits (1152), Expect = 5.800e-148
Identity = 232/410 (56.59%), Postives = 287/410 (70.00%), Query Frame = 1
Query:  373 VHRAASTFRVGKDKVFKVRAHWWEKNDFLTSSAGGRGVSSGKADGRKLLDDVQCASLRAFISDKHENGQQVFRRTVGEWVKDKCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTREEKEEAVIVYIDESFCHQLHGSAYSYFFTDEDGVVQDGMGRTSGKGLRMIMVHAITKGGALAALDGNNFPIPEGWFKRKD----KGKGRQGAGSMGTEETAEMLWQAKLATGVYRDAMTDKMFVEWLERRLAPAFKAKFGDKKMILVLDNASYHHGYDAEVRVPESNTKGYNTELLRKYKCKKIAVEREVTGSAGVESKKYTFKVPATGTFPQVNSKCGKGVSSPEVALATRALFQLKHPTKLMEKVEKFMNARGWQLIWTPPYMPSFQPIELFW 1590
            +++ A+T R+G D V  VR  W++K +   ++  GRG ++   DGR+++   Q   LR FI  +HE G+QVFRRTV ++++     ++SNRAVGGLL R+G++RRRGRIKIPPLN++RK RIR FLV+M  A   E+   AVIVYIDESF HQ HGSAYSYF +D+ GVVQDG+GRT+GKGLRMIMVHAITK G LA L    FPI EGWFK K+    K K  +    M  E+TAE LWQAKLATG Y +AMTD MF++WL+ RL PAF A+F +KKM LVLDNASYHH +D EV+VPE+N+K YN ELLRKY C    V RE  G A     +Y F+VPA G+ P  N K   GVS  E+A  TR  F+   P KL EK E +M  +GW LIWTPPYMP+FQPIELFW
Sbjct:    4 LYQVATTLRIGTDNVLAVRTLWYDKQELYETNGKGRGKATSFDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYIDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQ-EGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAA----EYNFEVPAQGSLPNANRK--NGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFW 406          
BLAST of mRNA_S-dermatodea_contig8894.16994.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE)

HSP 1 Score: 446 bits (1147), Expect = 9.330e-148
Identity = 242/410 (59.02%), Postives = 286/410 (69.76%), Query Frame = 1
Query:  379 RAASTFRVGKDKVFKVRAHWWEKNDFLTSSAGGRGVSSGKADGRKLLDDVQCASLRAFISDKHENGQQVFRRTVGEWVKDKCNKDL-SNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTREEKEEAVIVYIDESFCHQLHGSAYSYFFTDEDGVVQDGMGRTSGKGLRMIMVHAITKGGALAAL-DGNNFPIPEGWFKRKDKGKGRQGAGSMGTEETAEMLWQAKLATGVYRDAMTDKMFVEWLERRLAPAFKA--KFGDKKMILVLDNASYHHGYDAEVRVPESNTKGYNTELLRKYKCKKIAVEREVTGSAGVESKKYTFKVPAT--GTFPQVNSKCGKGVSSPEVALATRALFQLKHPTKLMEKVEKFMNARGWQLIWTPPYMPSFQPIELFW 1590
            + A TF++G DKV ++  HWW+      ++A GRG ++ K DGR+ L +VQ   LR FI+D+H+ G+QVFRRTV EW+   CN +  SNR+ GGLL R+GY+RRRGRIK PPLN +R ARIRRFLVEM  A   E+   AVIVY+DESF HQ HGS YSYF +DEDGVVQDG+GRT+GKGLRMIMVHAITK G LA L DG   PI EGWFK    GK       M  EETAE LWQAKLA G Y  AMTD MF+EWLE RL+PA+ A  +F  K+MILVLDNASYHHG+DAEV+VPESNTK +N +LLR +  K I V R+  G  GV    Y  +VP     +FP  N +   GVS  EVA ATR    L HP +L E+V  FM  +GW LIWTPPYMPSFQPIELFW
Sbjct:   10 QVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDG--LPIEEGWFKETGSGKKE-----MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRVRRK-EGEQGVVE--YNLEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFW 407          
BLAST of mRNA_S-dermatodea_contig8894.16994.1 vs. uniprot
Match: A0A6H5KP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP14_9PHAE)

HSP 1 Score: 441 bits (1133), Expect = 2.910e-145
Identity = 229/400 (57.25%), Postives = 280/400 (70.00%), Query Frame = 1
Query:  403 GKDKVFKVRAHWWEKNDFLTSSAGGRGVSSGKADGRKLLDDVQCASLRAFISDKHENGQQVFRRTVGEWVKDKCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTREEKEEAVIVYIDESFCHQLHGSAYSYFFTDEDGVVQDGMGRTSGKGLRMIMVHAITKGGALAALDGNNFPIPEGWFKRKD----KGKGRQGAGSMGTEETAEMLWQAKLATGVYRDAMTDKMFVEWLERRLAPAFKAKFGDKKMILVLDNASYHHGYDAEVRVPESNTKGYNTELLRKYKCKKIAVEREVTGSAGVESKKYTFKVPATGTFPQVNSKCGKGVSSPEVALATRALFQLKHPTKLMEKVEKFMNARGWQLIWTPPYMPSFQPIELFW 1590
            G DKV  VR  W++K +   ++  GRG ++   DGR+++   Q   LR FI  +HE G+QVFRRTV ++++     ++SNRAVGGLL R+G++RRRGRIKIPPLN++RK RIR FLV+M  A   E+   AVIVY+DESF HQ HGSAYSYF +D+ GVVQDG+GRT+GKGLRMIMVHAITK G LA L    FPI EGWFK K+    K K  +    M  E+TAE LWQAKLATG Y +AMTD MF++WL+ RL PAF A+F +KKM LVLDNASYHH +D EV+VPE+N+K YN ELLRKY C    V RE  G A     +Y F+VPA G+ P  N K   GVS  E+A  TR  F+   P KL EK E +M  +GW LIWTPPYMP+FQPIELFW
Sbjct:   58 GTDKVLAVRTLWYDKQELYETNGKGRGKATSVDDGRRVITQEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKGAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQ-EGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRESEGKAA----EYNFEVPAQGSLPNANRK--NGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFW 450          
BLAST of mRNA_S-dermatodea_contig8894.16994.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE)

HSP 1 Score: 436 bits (1120), Expect = 6.980e-144
Identity = 237/422 (56.16%), Postives = 285/422 (67.54%), Query Frame = 1
Query:  334 FELVQSGVDPNNAVHRAASTFRVGKDKVFKVRAHWWEKNDFLTSSAGGRGVSSGKADGRKLLDDVQCASLRAFISDKHENGQQVFRRTVGEWVKDKCNKDL-SNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTREEKEEAVIVYIDESFCHQLHGSAYSYFFTDEDGVVQDGMGRTSGKGLRMIMVHAITKGGALAALDGNNFPIPEGWFKRKDKGKGRQGAGSMGTEETAEMLWQAKLATGVYRDAMTDKMFVEWLERRLAPAFKA--KFGDKKMILVLDNASYHHGYDAEVRVPESNTKGYNTELLRKYKCKKIAVEREVTGSAGVESKKYTFKVPATGTFPQVNSKCGKGVSSPEVALATRALFQLKHPTKLMEKVEKFMNARGWQLIWTPPYMPSFQPIELFW 1590
            F+L + G   N AV + A TF++G DKV ++  HWW+      ++A GRG ++ K DGR+ L +VQ   LR FI+D+H+ G+QVFRRTV EW+   CN +  SNR+  GLL R+GY+ RRGRIK PPLN +R ARIRRFLVEM  A   E+   AVIVYID SF HQ HGS YSYF  DED VVQDG+GRT+GKGLR+IMVHAITK G LA L     PI EGWFK    GK       M  EETAE LWQAKLA G Y  AMTD MF+EWLE RL+PA+ A  +F  K+MILVLDNASYHHG+DAEV+VPE+NTK +N +LLR +  K I V+R+  G  GV  + +        +FP  N +   GVS  EVA ATR    L HP +L E+V  FM  +G  LIWTPPYMPSFQPIELFW
Sbjct:    7 FDLRKEGRAENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAEGLLSRLGYKGRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYIDGSFVHQAHGSPYSYFPADEDEVVQDGIGRTTGKGLRVIMVHAITKWGPLAKLC-VGLPIEEGWFKETGSGKRE-----MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVKRK-EGEQGVVEENFEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGLALIWTPPYMPSFQPIELFW 419          
BLAST of mRNA_S-dermatodea_contig8894.16994.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE)

HSP 1 Score: 437 bits (1123), Expect = 8.070e-142
Identity = 239/410 (58.29%), Postives = 286/410 (69.76%), Query Frame = 1
Query:  379 RAASTFRVGKDKVFKVRAHWWEKNDFLTSSAGGRGVSSGKADGRKLLDDVQCASLRAFISDKHENGQQVFRRTVGEWVKDKCNKDL-SNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTREEKEEAVIVYIDESFCHQLHGSAYSYFFTDEDGVVQDGMGRTSGKGLRMIMVHAITKGGALAAL-DGNNFPIPEGWFKRKDKGKGRQGAGSMGTEETAEMLWQAKLATGVYRDAMTDKMFVEWLERRLAPAFKA--KFGDKKMILVLDNASYHHGYDAEVRVPESNTKGYNTELLRKYKCKKIAVEREVTGSAGVESKKYTFKVPAT--GTFPQVNSKCGKGVSSPEVALATRALFQLKHPTKLMEKVEKFMNARGWQLIWTPPYMPSFQPIELFW 1590
            + A TF++G DKV ++  HWW+      ++A GRG ++ K DGR+ L +VQ   LR FI+D+H+ G+QVFRRTV EW+   CN +  SNR+ GGLL R+GY+RRRGRIK PPLN +R ARIRRFLV M+ A   E+   AVIVY+DESF HQ HGS YSYF +DEDGVVQDG+GRT+GKGLRMIMVHAITK G LA L DG   PI EGWFK    GK       M  EETAE LWQAKLA G Y  AMTD MF+EWLE RL+PA+ A  +F  K+MILVLDNASYHHG+ +EV+VPE+NTK +N +LLR +  K I V R+  G  GV    Y F+VP     +FP  N +   GVS  EVA ATR    L HP +L E+V  FM  +GW LIWTPPYMPSFQPIELFW
Sbjct:  138 QVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLV-MNMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDG--LPIEEGWFKETGSGKKE-----MEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLRMFGAKSIRVRRK-EGEQGVVE--YNFEVPTEPGSSFPAGNRE--GGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFW 534          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8894.16994.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ25_ECTSI2.330e-31588.11Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A6H5KZM0_9PHAE6.900e-21684.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDX2_9PHAE4.420e-15454.95Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]
D8LNM6_ECTSI5.470e-15256.25DDE_3 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KIM5_9PHAE1.920e-14957.37DDE_3 domain-containing protein n=4 Tax=Ectocarpus... [more]
A0A6H5KCN2_9PHAE5.800e-14856.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDX7_9PHAE9.330e-14859.02DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KP14_9PHAE2.910e-14557.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKL0_9PHAE6.980e-14456.16DDE_3 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5JR41_9PHAE8.070e-14258.29DDE_3 domain-containing protein n=5 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8894contigS-dermatodea_contig8894:6062..8393 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1961
Cds size195
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8894.16994.1prot_S-dermatodea_contig8894.16994.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8894 8199..8393 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925371.8796413-UTR-S-dermatodea_contig8894:6061..75991622925371.8796413-UTR-S-dermatodea_contig8894:6061..7599Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8894 6062..7599 -
1694079888.5532327-UTR-S-dermatodea_contig8894:6061..75991694079888.5532327-UTR-S-dermatodea_contig8894:6061..7599Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8894 6062..7599 -
1622925371.8893793-UTR-S-dermatodea_contig8894:7970..81981622925371.8893793-UTR-S-dermatodea_contig8894:7970..8198Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8894 7971..8198 -
1694079888.5719666-UTR-S-dermatodea_contig8894:7970..81981694079888.5719666-UTR-S-dermatodea_contig8894:7970..8198Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig8894 7971..8198 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925371.898415-CDS-S-dermatodea_contig8894:8198..83931622925371.898415-CDS-S-dermatodea_contig8894:8198..8393Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8894 8199..8393 -
1694079888.5830858-CDS-S-dermatodea_contig8894:8198..83931694079888.5830858-CDS-S-dermatodea_contig8894:8198..8393Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8894 8199..8393 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8894.16994.1

>prot_S-dermatodea_contig8894.16994.1 ID=prot_S-dermatodea_contig8894.16994.1|Name=mRNA_S-dermatodea_contig8894.16994.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=65bp
MVTKRKGRYVADGVTAKGKARTEKANLVNMLRAKEAALAVREATVAAGEA
AVLEAQKAAQEKQQ*
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mRNA from alignment at S-dermatodea_contig8894:6062..8393-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8894.16994.1 ID=mRNA_S-dermatodea_contig8894.16994.1|Name=mRNA_S-dermatodea_contig8894.16994.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2332bp|location=Sequence derived from alignment at S-dermatodea_contig8894:6062..8393- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTGACAAAGAGGAAGGGCCGCTATGTTGCGGACGGCGTGACAGCCAA GGGGAAGGCGAGGACGGAGAAAGCGAACTTGGTCAACATGCTGCGCGCAA AAGAGGCAGCCCTTGCTGTTCGCGAAGCGACTGTCGCTGCCGGCGAGGCC GCGGTTTTAGAGGCACAGAAGGCAGCCCAAGAGAAGCAGCAGTAGCAAGA AGCCGATGCGGACATCCGTACGCCCCAGCAAGAGGTTCGGGAGGCAGAAG CTGCCAAGCAGCGTAACGAGTTGGCTCACAGGACAGGCGCGCTTCTGGAC ATCTCACAGTCTCGCGGTATACCCCTAACGTACTTCGAGCTGGTGCAGTC AGGCGTCGACCCGAACAATGCTGTTCACCGGGCCGCCTCGACATTTCGCG TTGGCAAGGACAAGGTGTTCAAGGTAAGATTCTGCTGCAAGCTTCTGTTG TAAGCTACCCCTGCAAGCTTCTTCTGTAACTGCTGCTGCTGCTGCAAATA CTGCTGTAATTTATGTTGTAAGTGTACTACTGTGAGTATTGTACTGATGT ACTGCTGCAAGCTTCTGCAAGCGCTTCTGCTGTTACTGCTGCTGCTGCTG CAAATACTGCTGTAATTGTAGTGCTGTAAGTGTACTACTGTAAATATTTT ACTGCTCTAACTTCTGTAACTTTTGCTGTAAATACTGTAAATACTACTGC TGTAATTATACTGCTGTAAATATTGCACTGCTGTAACTTCTGTACCTATT GCTGTAATATTCTCACGGAATTTCGTGCACCGGCGTCGCAACAGGTTCGC GCTCATTGGTGGGAGAAGAACGACTTCTTGACATCATCGGCGGGAGGGAG AGGAGTGTCGAGCGGGAAGGCCGACGGGCGAAAGCTTCTTGACGACGTGC AGTGCGCCAGCCTTCGTGCCTTCATCAGCGACAAACACGAGAACGGGCAG CAAGTGTTCCGACGCACGGTGGGCGAGTGGGTCAAGGACAAGTGCAATAA GGACCTTTCTAACCGAGCGGTAGGCGGGCTTTTGTACAGGATTGGCTACA GACGCCGTCGAGGAAGGATCAAAATCCCGCCCCTCAACGACGATAGGAAG GCGCGCATTCGTCGCTTTCTTGTCGAGATGTCTGCTGCTCTCACTCGAGA AGAAAAAGAGGAGGCGGTCATCGTGTACATAGATGAGAGCTTTTGTCACC AGTTGCACGGGTCTGCTTACTCTTACTTTTTCACCGATGAGGATGGGGTA GTGCAGGATGGAATGGGCCGTACGTCTGGGAAGGGCTTGCGGATGATTAT GGTGCATGCGATAACCAAGGGGGGGGCGTTGGCAGCGCTGGATGGTAACA ACTTCCCAATTCCCGAAGGTTGGTTCAAGCGTAAGGATAAGGGTAAGGGC AGGCAGGGGGCTGGGTCAATGGGTACAGAGGAGACCGCAGAGATGCTTTG GCAGGCTAAGCTTGCCACCGGGGTTTACCGCGATGCCATGACAGACAAGA TGTTCGTGGAATGGCTCGAACGGCGCCTGGCACCGGCCTTTAAGGCGAAA TTTGGCGACAAGAAGATGATTCTGGTTCTTGATAACGCCTCGTACCACCA CGGGTATGACGCGGAGGTGCGGGTGCCTGAAAGTAACACTAAAGGGTACA ATACCGAGCTTTTGCGCAAGTACAAGTGCAAGAAGATTGCCGTGGAACGA GAGGTGACTGGTAGCGCAGGTGTAGAGAGCAAAAAGTACACCTTCAAGGT ACCAGCCACTGGCACGTTTCCCCAGGTGAATTCGAAGTGCGGTAAGGGTG TGAGCAGCCCCGAGGTAGCGCTGGCAACTCGAGCGCTCTTTCAGCTCAAG CATCCCACGAAGCTGATGGAGAAAGTGGAGAAGTTCATGAACGCGCGAGG GTGGCAGCTGATTTGGACCCCCCCATACATGCCGAGTTTCCAGCCGATCG AACTGTTCTGGAGCACGGTAAGCAGTATGTGAGCTTTAACTTTAAGACGA AGCGCACGATGGCAGAGGTTTCGGCACAGGTTCGGAGAGGTTGGTATGGA GATCCCATGTGGGAAGGGCAAGACGGGGATTGGAAACCGGCGGACTGTAG CAAACTCGTCGCGCACGCCATTAAGGAGATGAACAAGTGGGTCGTGAGGG ACCCTATTCTCAGGGGTCAGATGGGCGCTCTTGAAGAGATTCCCGAGTCG TACGAAGATGATGCCCCTGGGCACAACGATATCTTACATGATTATGGCGT AGAGGCCCAGGAGCAGCTTGAGTTGTCTGCCGAATTTATGGAGTTTTTGG GCGAGGAGGATGCGGACGGTGATGCAGAGGTG
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Coding sequence (CDS) from alignment at S-dermatodea_contig8894:6062..8393-

>mRNA_S-dermatodea_contig8894.16994.1 ID=mRNA_S-dermatodea_contig8894.16994.1|Name=mRNA_S-dermatodea_contig8894.16994.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=390bp|location=Sequence derived from alignment at S-dermatodea_contig8894:6062..8393- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTGACAAAGAGGAAGGGCCGCTATGTTGCGGACGGCGTGACAGCCAA
GGGGAAGGCGAGGACGGAGAAAGCGAACTTGGTCAACATGCTGCGCGCAA
AAGAGGCAGCCCTTGCTGTTCGCGAAGCGACTGTCGCTGCCGGCGAGGCC
GCGGTTTTAGAGGCACAGAAGGCAGCCCAAGAGAAGCAGCAGTAGATGGT
GACAAAGAGGAAGGGCCGCTATGTTGCGGACGGCGTGACAGCCAAGGGGA
AGGCGAGGACGGAGAAAGCGAACTTGGTCAACATGCTGCGCGCAAAAGAG
GCAGCCCTTGCTGTTCGCGAAGCGACTGTCGCTGCCGGCGAGGCCGCGGT
TTTAGAGGCACAGAAGGCAGCCCAAGAGAAGCAGCAGTAG
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