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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 794 |
| Cds size | 699 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622925369.8343794-UTR-S-dermatodea_contig885:24393..24487 | 1622925369.8343794-UTR-S-dermatodea_contig885:24393..24487 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig885 24394..24487 - |
| 1694079886.9964123-UTR-S-dermatodea_contig885:24393..24487 | 1694079886.9964123-UTR-S-dermatodea_contig885:24393..24487 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig885 24394..24487 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig885.16973.1 >prot_S-dermatodea_contig885.16973.1 ID=prot_S-dermatodea_contig885.16973.1|Name=mRNA_S-dermatodea_contig885.16973.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=233bp
MCTAPALGVFSDDSMPMSLHQPAQVAHLQTPAHLVTCGCSQCPSLLQSFR
ESDHTHAPTDRRFKPTQDRIGPPFFLSQALTGEGKDSPIAQNAKKATASP
RSSPSTARSAAAADGAPSISRLSKSDSYLVGENGESIGGGDAIRDGGDST
REGQKGLVPAVQDLALGVVSKTAPASNATADIAVASSARSSARPSDNPRS
ARKSDTPDTPSAQRSSGKEDASDQIVKQRGESE back to topmRNA from alignment at S-dermatodea_contig885:23245..24487- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig885.16973.1 ID=mRNA_S-dermatodea_contig885.16973.1|Name=mRNA_S-dermatodea_contig885.16973.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1243bp|location=Sequence derived from alignment at S-dermatodea_contig885:23245..24487- (Saccorhiza dermatodea SderLu1190fm monoicous)
TGGTTTTGCTGGGTTGACGGAACGGCTTGTCTTGGTACCCACACGAAGAC
GGTTCGCCCTCATTGTCGCACGGCGAACTTGAAAGTCCATCGTGATGTGC
ACCGCACCAGCGCTTGGTGTATTTAGCGACGATAGTATGCCCATGTCACT
TCATCAACCGGCGCAGGTTGCGCATCTCCAAACGCCAGCGCATCTCGTGA
CTTGCGGGTGTAGCCAATGCCCTTCATTGCTACAGTCGTTTCGGGAATCT
GACCACACGCATGCCCCAACCGATCGCCGTTTCAAACCAACTCAAGATCG
TATCGGCCCCCCGTTTTTCTTGTCTCAGGCTCTCACCGGCGAAGGAAAAG
ATTCCCCAATCGCACAGAATGCGAAGAAAGCTACGGCATCGCCCAGAAGT
TCTCCTTCGACCGCACGATCGGCTGCCGCCGCCGATGGGGCCCCTTCGAT
TTCGCGGCTGTCAAAGAGCGACTCCTACCTCGTCGGGGAAAACGGCGAGT
CTATCGGCGGTGGCGACGCCATCCGCGACGGTGGTGACAGTACACGGGAG
GGGCAAAAGGGATTGGTACCTGCGGTGCAGGATCTAGCTCTCGGTGTGGT
GTCGAAGACGGCTCCTGCTTCGGTAGGAGAAATGGTGGGCTAGCGAACAT
AAACGAATGTTGCTACACCGCTGTGTCGGAAATGATCGTTCATGCCGGTG
GGGGGGTGGAGTGAACCGCCACGCCTTGCACGGCTTCGGTTCATTGTTTT
TGGTCGCTTGGCTGCGGGGGGTTGACTTGTGGAGCTGCCGTGGCTTCGAA
GACGTCACGGGACTTGACGGCAAAAACGACTCTGCCGGAGAACTATCAAG
AGGGACGAATAGAAGAGTTTCCGGAAGCAGAACAGCCGTTAAACCGCTGC
CAGAGTAAGGTTGTCACGGCCTGTAAGAACCCGCGAGCGGTGTATGTACG
GCAGACTACCCTTTTCACGCCACGCGGTCTCATACCTCGAATCAGTCAAT
ATTTCAAAAATCGCACGTACGTCAACATCCCAAGAAACACAACACACCCG
CTCGCCTCCCCTATCCCCACAGAATGCTACAGCAGACATCGCCGTCGCCA
GCTCCGCGCGTTCTTCTGCTCGACCAAGCGACAACCCGCGCTCAGCTCGA
AAATCGGATACCCCGGACACCCCCAGCGCCCAAAGAAGTAGTGGAAAAGA
AGATGCGAGTGATCAGATAGTCAAACAGCGCGGGGAGAGTGAG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig885:23245..24487- >mRNA_S-dermatodea_contig885.16973.1 ID=mRNA_S-dermatodea_contig885.16973.1|Name=mRNA_S-dermatodea_contig885.16973.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1398bp|location=Sequence derived from alignment at S-dermatodea_contig885:23245..24487- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTGCACCGCACCAGCGCTTGGTGTATTTAGCGACGATAGTATGCCCAT
GTCACTTCATCAACCGGCGCAGGTTGCGCATCTCCAAACGCCAGCGCATC
TCGTGACTTGCGGGTGTAGCCAATGCCCTTCATTGCTACAGTCGTTTCGG
GAATCTGACCACACGCATGCCCCAACCGATCGCCGTTTCAAACCAACTCA
AGATCGTATCGGCCCCCCGTTTTTCTTGTCTCAGGCTCTCACCGGCGAAG
GAAAAGATTCCCCAATCGCACAGAATGCGAAGAAAGCTACGGCATCGCCC
AGAAGTTCTCCTTCGACCGCACGATCGGCTGCCGCCGCCGATGGGGCCCC
TTCGATTTCGCGGCTGTCAAAGAGCGACTCCTACCTCGTCGGGGAAAACG
GCGAGTCTATCGGCGGTGGCGACGCCATCCGCGACGGTGGTGACAGTACA
CGGGAGGGGCAAAAGGGATTGGTACCTGCGGTGCAGGATCTAGCTCTCGG
TGTGGTGTCGAAGACGGCTCCTGCTTCGATGTGCACCGCACCAGCGCTTG
GTGTATTTAGCGACGATAGTATGCCCATGTCACTTCATCAACCGGCGCAG
GTTGCGCATCTCCAAACGCCAGCGCATCTCGTGACTTGCGGGTGTAGCCA
ATGCCCTTCATTGCTACAGTCGTTTCGGGAATCTGACCACACGCATGCCC
CAACCGATCGCCGTTTCAAACCAACTCAAGATCGTATCGGCCCCCCGTTT
TTCTTGTCTCAGGCTCTCACCGGCGAAGGAAAAGATTCCCCAATCGCACA
GAATGCGAAGAAAGCTACGGCATCGCCCAGAAGTTCTCCTTCGACCGCAC
GATCGGCTGCCGCCGCCGATGGGGCCCCTTCGATTTCGCGGCTGTCAAAG
AGCGACTCCTACCTCGTCGGGGAAAACGGCGAGTCTATCGGCGGTGGCGA
CGCCATCCGCGACGGTGGTGACAGTACACGGGAGGGGCAAAAGGGATTGG
TACCTGCGGTGCAGGATCTAGCTCTCGGTGTGGTGTCGAAGACGGCTCCT
GCTTCGAATGCTACAGCAGACATCGCCGTCGCCAGCTCCGCGCGTTCTTC
TGCTCGACCAAGCGACAACCCGCGCTCAGCTCGAAAATCGGATACCCCGG
ACACCCCCAGCGCCCAAAGAAGTAGTGGAAAAGAAGATGCGAGTGATCAG
ATAGTCAAACAGCGCGGGGAGAGTGAGAATGCTACAGCAGACATCGCCGT
CGCCAGCTCCGCGCGTTCTTCTGCTCGACCAAGCGACAACCCGCGCTCAG
CTCGAAAATCGGATACCCCGGACACCCCCAGCGCCCAAAGAAGTAGTGGA
AAAGAAGATGCGAGTGATCAGATAGTCAAACAGCGCGGGGAGAGTGAG back to top
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