mRNA_S-dermatodea_contig8842.16966.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8842.16966.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI) HSP 1 Score: 226 bits (575), Expect = 2.730e-65 Identity = 102/181 (56.35%), Postives = 128/181 (70.72%), Query Frame = 1
Query: 10 FSGEGTFFGATTDG--NCAIRAPIPSMYSGMTPVALNGPQYGDSMLCGACIEGRGEGVGSGTTPIDYEFKGYVSDKCPECSEGDLDFAMVGDGRWDITWKFVPCPGSSDSPTFLFEGSHQYYWKMQPRGTGTPVKELSVNGRSGVRTDDNFFEIKDVLFSGPQAVETTTILGAKVTQEITL 546
FSG+ T++G T DG NCAIR+P+P MY GM PVALN QY DS +CGACIEG G G G G P++ FK YV+D+CPEC GDLDFA GDGRWDI+W FVPC G SD TFLFEGS+++YWK+QPRG +PV+ L +NG R++DNFF ++ F G Q V T T+L + Q + +
Sbjct: 41 FSGDATYYGVTPDGDGNCAIRSPLPEMYDGMIPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQ-TFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILEGGPFDGEQEVHTKTVLNKRRRQSVAM 220
BLAST of mRNA_S-dermatodea_contig8842.16966.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI) HSP 1 Score: 222 bits (565), Expect = 5.830e-63 Identity = 100/183 (54.64%), Postives = 127/183 (69.40%), Query Frame = 1
Query: 1 GTSFSGEGTFFGATTDGNCAIRAPIPSMYSGMTPVALNGPQYGDSMLCGACIEGRGEGVGSGTTPIDYEFKGYVSDKCPECSEGDLDFAMVGDGRWDITWKFVPCPGSSDSPTFLFEGSHQYYWKMQPRGTGTPVKELSVNGRSGVRTDDNFFEIKD--VLFSGPQAVETTTILGAKVTQEIT 543
G +SGEGT++G TT G C+ +P MY GM PVALN QYGDS++CGAC+EG G GSG PI FK +++DKCPEC +GDLDF+M GDGRWDI WKFV CPG S F+ ++ YYWK+QPRGT TPV L+V+G+S +RT DN FE+ + +SG Q V TTT+ G T E++
Sbjct: 105 GEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGEETS--FVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDGAAWSGAQTVVTTTVSGVTETAEVS 285
BLAST of mRNA_S-dermatodea_contig8842.16966.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI) HSP 1 Score: 213 bits (543), Expect = 2.090e-57 Identity = 100/185 (54.05%), Postives = 128/185 (69.19%), Query Frame = 1
Query: 1 GTSFSGEGTFFGATTDGNCAIRAPIPSMYSGMTPVALNGPQYGDSMLCGACIEGRGEGVGSGTTPIDYEFKGYVSDKCPECSEGDLDFAMVGDGRWDITWKFVPCPGSSDSPTFLFEGSHQYYWKMQPRGTGTPVKELSVNGRSGVRTDDNFFEIK----DVLFSGPQAVETTTILGAKVTQEIT 543
G +F+GEGT++ T+ GNC PS+Y GMTPVALN PQYGDS++CGAC+EG G G GSG+ P+ FKG++ DKCPECSEGDLDF DGRWDI WKFV CP + + +F E +YYWK+QPRGT TPV+ L++ GR+ RTDDN FE++ D + PQ V TTT+ G E++
Sbjct: 312 GITFNGEGTYYTGTSAGNCGFFDDFPSIYDGMTPVALNEPQYGDSLMCGACVEGEGTGGGSGSDPVGT-FKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECP-AGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGDPWYE-PQMVVTTTVGGVVEETEMS 493
BLAST of mRNA_S-dermatodea_contig8842.16966.1 vs. uniprot
Match: A0A2V3ISL2_9FLOR (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR) HSP 1 Score: 203 bits (517), Expect = 4.100e-56 Identity = 94/178 (52.81%), Postives = 123/178 (69.10%), Query Frame = 1
Query: 10 FSGEGTFFGATTDGNCAIRAPIPSMYSGMTPVALNGPQYGDSMLCGACIEGRGEGVGSGTTPIDYEFKGYVSDKCPECSEGDLDFAMVGDGRWDITWKFVPCPGSSDSPTFLFEGSHQYYWKMQPRGTGTPVKELSVNGRSGVRTDDNFFEIKDVL-FSGPQAVETTTILGAKVTQEI 540
F GEGT++G TT GNCAIR+P+PSMY+GM PVA+N QY +S CGAC++ G G GSG PI FK YV D+CPEC GD+D + GDGRW + WKF+PCPG + FLFEGS++YY K+QPRG TPV LSV G+ G +T DNF+ +++ F P V+ T+L +T ++
Sbjct: 29 FHGEGTYYGYTTRGNCAIRSPMPSMYNGMLPVAINNAQYENSASCGACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCPG--EFVFFLFEGSNRYYLKLQPRGLKTPVSALSVGGQWGTKTQDNFYIVQNGGGFRFPITVQMRTVLNEWITVQL 204
BLAST of mRNA_S-dermatodea_contig8842.16966.1 vs. uniprot
Match: F2Z7J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J0_9FLOR) HSP 1 Score: 199 bits (505), Expect = 1.930e-54 Identity = 90/178 (50.56%), Postives = 121/178 (67.98%), Query Frame = 1
Query: 10 FSGEGTFFGATTDGNCAIRAPIPSMYSGMTPVALNGPQYGDSMLCGACIEGRGEGVGSGTTPIDYEFKGYVSDKCPECSEGDLDFAMVGDGRWDITWKFVPCPGSSDSPTFLFEGSHQYYWKMQPRGTGTPVKELSVNGRSGVRTDDNFFEIKDVL-FSGPQAVETTTILGAKVTQEI 540
F G+GT++G TT GNCAIR+P+P MYSGM PVA+N QY +S CGAC+ G G GSG P+ FK YV D+CPEC GD+D + GDGRW + W+F+PCPG + FLFEGS+++Y K+QPRG TPV SVNG+ G +T DNF+ +++ F P V+ T+L +T ++
Sbjct: 24 FFGDGTYYGYTTRGNCAIRSPLPGMYSGMVPVAINNAQYEESKSCGACLLVTGYGQGSGANPVVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVQWRFIPCPG--EWVFFLFEGSNRFYLKLQPRGLKTPVTYFSVNGQQGTKTQDNFYILQNGGGFRYPLTVQMRTVLNEWITVKL 199
BLAST of mRNA_S-dermatodea_contig8842.16966.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE) HSP 1 Score: 202 bits (513), Expect = 6.860e-53 Identity = 98/186 (52.69%), Postives = 121/186 (65.05%), Query Frame = 1
Query: 1 GTSFSGEGTFFGATTDGNCAIRAPIPSMYSGMTPVALNGPQYGDSMLCGACIEGRGEGVGSGTTPIDYEFKGYVSDKCPECSEGDLDFAMVGDGRWDITWKFVPCPGSSDSPTFLFEGSHQYYWKMQPRGTGTPVKELSVNGRSGVRTDDNFFEIKDVLFSG-----PQAVETTTILGAKVTQEIT 543
GT+F G+GT++ + GNC PS+YSGMTPVALN QYGDS++CG+C+EG G G G G PI FKG++ DKCPEC EGDLDF DGRWDI W+FV CPG S F YYWK+QPRGT TPV+ L++ GR+ RTDDN FE++ SG PQ V TTT+ G E++
Sbjct: 349 GTTFEGDGTYYTGISAGNCGFFDDFPSIYSGMTPVALNAAQYGDSLMCGSCVEGEGTGGGGGDNPIGT-FKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACPGEEVS--FKVVEMTPYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHP--SGNPWYEPQMVVTTTVGGVVEETEMS 529
BLAST of mRNA_S-dermatodea_contig8842.16966.1 vs. uniprot
Match: A0A1X6NJE1_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJE1_PORUM) HSP 1 Score: 168 bits (426), Expect = 2.870e-44 Identity = 79/173 (45.66%), Postives = 104/173 (60.12%), Query Frame = 1
Query: 1 GTSFSGEGTFFGATTDGNCAIRAPIPSMYSGMTPVALNGPQYGDSMLCGACIEGRGEGVGSGTTPIDYEFKGYVSDKCPECSEGDLDFAMVGDGRWDITWKFVPCPGSSDSPTFLFEGSHQYYWKMQPRGTGTPVKELSVNGRSGVRTDDNFFEIKDVLFSGPQAVETTTILG 519
G + +GEGT+FG TT GNCA+ P+P+ Y G+ VA++ Y S CGAC+ G G G+G PI F YV D+CPEC+ GDLD A GDGRW ++W VPCP + +P FL EGS+ +Y K+Q RG P +SV G + RT DNFF + +GP T+ G
Sbjct: 45 GQTGAGEGTYFGPTTRGNCALD-PLPAQYGGLVGVAVSTADYAGSAACGACLRVTGSGDGAGANPITGTFSAYVMDRCPECAAGDLDLATPGDGRWAVSWTVVPCPTAGGAPEFLLEGSNPHYLKVQVRGLPAPAASVSVGGAACARTQDNFFIVAT---AGPPLEPPLTVTG 213
BLAST of mRNA_S-dermatodea_contig8842.16966.1 vs. uniprot
Match: A0A7S4IRK7_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IRK7_9EUKA) HSP 1 Score: 148 bits (374), Expect = 2.440e-35 Identity = 77/188 (40.96%), Postives = 108/188 (57.45%), Query Frame = 1
Query: 13 SGEGTFFGATTDGNCAIRAPIPSMYSG---MTPVALNGPQYGDSMLCGACIEGRGEGVGSGTTPIDYEFKGYVSDKCPECSEGDLDFAMVGDGRWDITWKFVPCPGSSDSPTFLFEGSHQYYWKMQPRGTGTPVKEL---SVNGRSGVR---TDDNFFEIKDVL-FSGPQAVETTTILGAKVTQEITL 546
SGEGT++G ++ G+C + +P + + VA+N PQY S+ CG CI+ GEGVGSG PID F YVSD CPEC+ GDLD A GDGRW+I W V CPG+ +L +GS+ ++ K+Q R PV +L +G+S + T DNFF + SG V+ ++ G V +T+
Sbjct: 20 SGEGTYYGPSSSGSCTLDFNLPPVAQTSEIFSTVAMNSPQYYGSLTCGMCIQMTGEGVGSGADPIDGTFIVYVSDLCPECASGDLDVAQSGDGRWEIEWTAVDCPGNYGDLQYLGQGSNDFFLKVQVRNHRVPVSQLYLLDADGQSRITMTPTSDNFFTYQSSSSLSGSYTVQVESVDGQAVDDVVTI 207
BLAST of mRNA_S-dermatodea_contig8842.16966.1 vs. uniprot
Match: A0A2T7NDP7_POMCA (Expansin-like EG45 domain-containing protein n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NDP7_POMCA) HSP 1 Score: 137 bits (345), Expect = 6.720e-33 Identity = 73/186 (39.25%), Postives = 101/186 (54.30%), Query Frame = 1
Query: 4 TSFSGEGTFFGATTDGN-CAIRAPIPSMYSGMT-PVALNGPQYGDSMLCGACIEGRGEGVGSGTTPIDYEFKGYVSDKCPECSEGDLDFAMVGDGRWDITWKFVPCPGSSDSPTFLFEGSHQYYWKMQPRGTGTPVKELSVNGRSG----VRTDDNFFEIKDVLFSGPQAVETTTILGAKVTQEIT 543
++F G+GT++G++ G C+ P SG PVALN PQ+ +S++CG+C G G GSG +PI F +V + CPEC GDLD + GDGRWDIT + V CP S + F F+GS+ YY K+Q R PV + + T D FF SG V T + GA++T I+
Sbjct: 31 STFKGDGTYYGSSGGGGTCSYGVQNPPAASGTKYPVALNSPQFMNSVMCGSCWRVTGAGTGSGHSPITGTFTVFVDNLCPECHAGDLDLGVSGDGRWDITIQAVQCPVGSGNVQFKFQGSNPYYVKLQVRNARLPVHVMEIEQGGSFHAMTHTGDGFFLYNGGPISGAFRVRLTAVNGAQITDTIS 216
BLAST of mRNA_S-dermatodea_contig8842.16966.1 vs. uniprot
Match: A0A2C9LCA8_BIOGL (Uncharacterized protein n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9LCA8_BIOGL) HSP 1 Score: 130 bits (327), Expect = 2.180e-30 Identity = 64/149 (42.95%), Postives = 86/149 (57.72%), Query Frame = 1
Query: 7 SFSGEGTFFGATTDGNCAIRAPIPSMYSG---MTPVALNGPQYGDSMLCGACIEGRGEGVGSGTTPIDYEFKGYVSDKCPECSEGDLDFAMVGDGRWDITWKFVPCPGSSDSPTFLFEGSHQYYWKMQPRGTGTPVKELSVNGRSGVRT 444
S+ G+GT++G T DG C I P+P S VALN PQ+ +SM CG CI+ G G G G PI E YV D CP C EGD+DFA+ GDGRW+IT + V CP S + + F+GS+ +Y K+Q R P+ + + +T
Sbjct: 35 SYKGDGTYYGETVDGTCQIARPLPMAASDPKISALVALNRPQFLNSMTCGMCIKVVGSGHGLGNNPIVGEHIVYVKDMCPVCHEGDVDFALDGDGRWNITMQAVQCPVGSSTIQYAFQGSNAWYIKLQIRNARIPITGVQIEKNGAWQT 183 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8842.16966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8842.16966.1 >prot_S-dermatodea_contig8842.16966.1 ID=prot_S-dermatodea_contig8842.16966.1|Name=mRNA_S-dermatodea_contig8842.16966.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=156bp MYSGMTPVALNGPQYGDSMLCGACIEGRGEGVGSGTTPIDYEFKGYVSDKback to top mRNA from alignment at S-dermatodea_contig8842:5827..8922- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8842.16966.1 ID=mRNA_S-dermatodea_contig8842.16966.1|Name=mRNA_S-dermatodea_contig8842.16966.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3096bp|location=Sequence derived from alignment at S-dermatodea_contig8842:5827..8922- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8842:5827..8922- >mRNA_S-dermatodea_contig8842.16966.1 ID=mRNA_S-dermatodea_contig8842.16966.1|Name=mRNA_S-dermatodea_contig8842.16966.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=936bp|location=Sequence derived from alignment at S-dermatodea_contig8842:5827..8922- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |