mRNA_S-dermatodea_contig8833.16960.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig8833.16960.1 vs. uniprot
Match: D8LJR4_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR4_ECTSI) HSP 1 Score: 216 bits (550), Expect = 8.580e-71 Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 1
Query: 1 MAATMARPPFHDQKSGVRYDCNNPDHAGWLRKESAWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHDTTYFMYANTEK 312
MA TMARPPFHDQK+GVRYDCNNPDHAGWLRKES WLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTH+TTYFMYANTEK
Sbjct: 1 MATTMARPPFHDQKTGVRYDCNNPDHAGWLRKESVWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHETTYFMYANTEK 104
BLAST of mRNA_S-dermatodea_contig8833.16960.1 vs. uniprot
Match: A0A835ZE28_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE28_9STRA) HSP 1 Score: 157 bits (396), Expect = 2.350e-47 Identity = 73/102 (71.57%), Postives = 83/102 (81.37%), Query Frame = 1
Query: 7 ATMARPPFHDQKSGVRYDCNNPDHAGWLRKESAWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHDTTYFMYANTEK 312
A + RP + D +G+ YDCNNPD G+L K+S+WLKDWR RFF+LKGS LFFAKSE PHG IDLSSCMTVKSAEQKT KRNALEVST DTT+FM+A TEK
Sbjct: 2 AHVIRPQYQDPATGILYDCNNPDFTGYLTKQSSWLKDWRRRFFILKGSKLFFAKSEMAAPHGMIDLSSCMTVKSAEQKTHKRNALEVSTQDTTFFMFAGTEK 103
BLAST of mRNA_S-dermatodea_contig8833.16960.1 vs. uniprot
Match: W7TJA6_9STRA (Pleckstrin like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJA6_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.270e-39 Identity = 64/98 (65.31%), Postives = 78/98 (79.59%), Query Frame = 1
Query: 19 RPPFHDQKSGVRYDCNNPDHAGWLRKESAWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHDTTYFMYANTEK 312
R + D ++ +RYD NN D GWL K+S+WLK+WR R+F+LKGS LFFAK+E +PHG IDLSSCMTVKSAE K KRNALEVST +TT+ MYA+TEK
Sbjct: 2 RGTYMDPETNIRYDTNNADFEGWLTKQSSWLKEWRRRYFILKGSKLFFAKNEMCSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEK 99
BLAST of mRNA_S-dermatodea_contig8833.16960.1 vs. uniprot
Match: A0A7S2A403_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A403_TRICV) HSP 1 Score: 136 bits (343), Expect = 3.610e-38 Identity = 60/100 (60.00%), Postives = 78/100 (78.00%), Query Frame = 1
Query: 13 MARPPFHDQKSGVRYDCNNPDHAGWLRKESAWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHDTTYFMYANTEK 312
+ARPPF D + + YDC++P++ GWL K+S WLKDWR R+F+LKGS LFF KS + TPHG IDL+ C TVKSA+ K+ KRN+ EVST + TY +YA+TEK
Sbjct: 76 IARPPFVDPTTNICYDCSDPEYEGWLTKQSMWLKDWRRRYFLLKGSKLFFCKSPHSTPHGMIDLAKCTTVKSADLKSRKRNSFEVSTPELTYLLYADTEK 175
BLAST of mRNA_S-dermatodea_contig8833.16960.1 vs. uniprot
Match: A0A7S2LSC0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LSC0_9STRA) HSP 1 Score: 134 bits (336), Expect = 5.740e-38 Identity = 59/104 (56.73%), Postives = 78/104 (75.00%), Query Frame = 1
Query: 1 MAATMARPPFHDQKSGVRYDCNNPDHAGWLRKESAWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHDTTYFMYANTEK 312
MA + RPP+ D + +R+D + + GWL K+SAW+KDWR R+F+LKGS LFFAK+ PHG IDLS+C TVKSA+ KT K N+ E+STHDTT+F+YA+ EK
Sbjct: 1 MANRIGRPPYFDPVTNIRFDTDCAEFEGWLTKQSAWVKDWRRRYFILKGSKLFFAKTGTSAPHGMIDLSTCTTVKSADVKTRKNNSFEISTHDTTFFLYADNEK 104
BLAST of mRNA_S-dermatodea_contig8833.16960.1 vs. uniprot
Match: A0A7S2AKD7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AKD7_9STRA) HSP 1 Score: 133 bits (334), Expect = 8.330e-38 Identity = 59/104 (56.73%), Postives = 78/104 (75.00%), Query Frame = 1
Query: 1 MAATMARPPFHDQKSGVRYDCNNPDHAGWLRKESAWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHDTTYFMYANTEK 312
MAA R P+ + + +++ ++PD GWL K+S W+K+WR R+F+LKGS LFFAK E TPHG +DL+ CMTVKSAE K K+NALEVST DTT+ M+A+TEK
Sbjct: 13 MAAAQTRKPYINPSTNEKHETSDPDFQGWLTKQSTWIKEWRRRYFILKGSKLFFAKGEAATPHGMVDLAQCMTVKSAETKAGKKNALEVSTADTTFLMFADTEK 116
BLAST of mRNA_S-dermatodea_contig8833.16960.1 vs. uniprot
Match: A0A7S4A7D4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7D4_9STRA) HSP 1 Score: 132 bits (332), Expect = 9.790e-38 Identity = 61/95 (64.21%), Postives = 74/95 (77.89%), Query Frame = 1
Query: 28 FHDQKSGVRYDCNNPDHAGWLRKESAWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHDTTYFMYANTEK 312
+ D +G+RYD +NPDH+GWL K+SAWL+DWR R F+LK S LFF+K E PHG IDL+ CMTVKSAE K +R+ALEVST DTTY M A+TEK
Sbjct: 4 YTDPATGIRYDTSNPDHSGWLTKQSAWLRDWRRRHFILKQSKLFFSKHEGSPPHGMIDLARCMTVKSAEFKARRRHALEVSTQDTTYLMCADTEK 98
BLAST of mRNA_S-dermatodea_contig8833.16960.1 vs. uniprot
Match: A0A7R9ZAF4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZAF4_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.220e-36 Identity = 58/104 (55.77%), Postives = 77/104 (74.04%), Query Frame = 1
Query: 1 MAATMARPPFHDQKSGVRYDCNNPDHAGWLRKESAWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHDTTYFMYANTEK 312
MA + RPP+ D + + YD +NP++ GWL K+S WLKDWR R+F+LKGS LFFAK + PHG IDL+ C TVKSA+ K+ KRN+ EVST + TY +YA++EK
Sbjct: 38 MAGRLIRPPYVDPTTSICYDTDNPEYEGWLTKQSMWLKDWRRRYFILKGSKLFFAKLPHSAPHGMIDLAQCTTVKSADLKSHKRNSFEVSTPEVTYLLYADSEK 141
BLAST of mRNA_S-dermatodea_contig8833.16960.1 vs. uniprot
Match: A0A7S1CZ96_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZ96_CYCTE) HSP 1 Score: 129 bits (324), Expect = 1.030e-35 Identity = 59/105 (56.19%), Postives = 78/105 (74.29%), Query Frame = 1
Query: 7 ATMA---RPPFHDQKSGVRYDCNNPDHAGWLRKESAWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHDTTYFMYANTEK 312
ATM+ RP + D+++ + YD NN D GWL K+S WLKDWR R+F+LKGS LFF+K+ Y PHG IDLS C TVKSA+ K+ KRN+ E+ST + T+ +YA+TEK
Sbjct: 26 ATMSHLMRPHYIDKQTNIIYDTNNADFEGWLTKQSMWLKDWRRRYFILKGSKLFFSKTNYSAPHGMIDLSQCTTVKSADLKSKKRNSFEISTPELTFLLYADTEK 130
BLAST of mRNA_S-dermatodea_contig8833.16960.1 vs. uniprot
Match: A0A7S3LD69_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LD69_9STRA) HSP 1 Score: 128 bits (321), Expect = 2.100e-35 Identity = 54/99 (54.55%), Postives = 77/99 (77.78%), Query Frame = 1
Query: 13 MARPPFHDQKSGVRYDCNNPDHAGWLRKESAWLKDWRPRFFVLKGSNLFFAKSEYETPHGRIDLSSCMTVKSAEQKTSKRNALEVSTHDTTYFMYANTE 309
+ RPPF D ++ + YD N+P++ GWL K+S WLK+WR R+F+LKGS LF+ K+EY PHG IDL+SC TVKSA+ K+ KR++LE+ST +T +YA++E
Sbjct: 25 LMRPPFVDTQTNIMYDVNDPEYEGWLTKQSTWLKEWRRRYFILKGSKLFYCKNEYSGPHGMIDLASCTTVKSADLKSKKRHSLEISTPETQILLYADSE 123 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8833.16960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8833.16960.1 >prot_S-dermatodea_contig8833.16960.1 ID=prot_S-dermatodea_contig8833.16960.1|Name=mRNA_S-dermatodea_contig8833.16960.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=104bp MAATMARPPFHDQKSGVRYDCNNPDHAGWLRKESAWLKDWRPRFFVLKGSback to top mRNA from alignment at S-dermatodea_contig8833:141..3384- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8833.16960.1 ID=mRNA_S-dermatodea_contig8833.16960.1|Name=mRNA_S-dermatodea_contig8833.16960.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3244bp|location=Sequence derived from alignment at S-dermatodea_contig8833:141..3384- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8833:141..3384- >mRNA_S-dermatodea_contig8833.16960.1 ID=mRNA_S-dermatodea_contig8833.16960.1|Name=mRNA_S-dermatodea_contig8833.16960.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=624bp|location=Sequence derived from alignment at S-dermatodea_contig8833:141..3384- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |