mRNA_S-dermatodea_contig8813.16951.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8813.16951.1 vs. uniprot
Match: A0A6H5JQI0_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQI0_9PHAE) HSP 1 Score: 540 bits (1390), Expect = 6.760e-193 Identity = 238/268 (88.81%), Postives = 256/268 (95.52%), Query Frame = 1
Query: 1 MASDAADTVLDGRALTLNPITLTKDTVETVVYHWKNKSINWPMSIYITLVHLAAVVGFCTIPECKWQTCLMAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVFMMLINSMANQGSIYHWSRDHRVHHKYSEQDADPHNATRGFFFAHMGWLYVKKHPDVIKAGRTLNFSDLEADPVVMFQDRLDPWFALFMCFVFPSLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNW 804
MASDA+D +L+GR+LTLNP TL KDTVETVVYHWKNKSINWPM+IYITLVH+AAV+GFCTI +CKWQTCL+AF+LWPITGLGITGGVHRLWAHRSYDAHW+VRVFMMLINSMANQGSIYHWSRDHRVHHKYSE DADPHNA RGFFFAHMGWLYVKKHP+VIKAGRTL+++DLEADP+VMFQD LDPWFALFMCFV P++VA WGEDFWHGFWVAGALRY VVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNW
Sbjct: 1 MASDASDVLLEGRSLTLNPFTLIKDTVETVVYHWKNKSINWPMAIYITLVHMAAVLGFCTIQDCKWQTCLLAFVLWPITGLGITGGVHRLWAHRSYDAHWSVRVFMMLINSMANQGSIYHWSRDHRVHHKYSETDADPHNAKRGFFFAHMGWLYVKKHPEVIKAGRTLSYADLEADPIVMFQDSLDPWFALFMCFVLPAMVANRGWGEDFWHGFWVAGALRYVVVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNW 268
BLAST of mRNA_S-dermatodea_contig8813.16951.1 vs. uniprot
Match: A0A835YKG8_9STRA (Stearoyl-CoA desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKG8_9STRA) HSP 1 Score: 458 bits (1178), Expect = 1.460e-160 Identity = 206/256 (80.47%), Postives = 223/256 (87.11%), Query Frame = 1
Query: 37 RALTLNPITLTKDTVETVVYHWKNKSINWPMSIYITLVHLAAVVGFCTIPECKWQTCLMAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVFMMLINSMANQGSIYHWSRDHRVHHKYSEQDADPHNATRGFFFAHMGWLYVKKHPDVIKAGRTLNFSDLEADPVVMFQDRLDPWFALFMCFVFPSLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNW 804
R LTLNPITL +DT E V YH+K +INWPM YITLVH+AAVVG C +P WQT L AFILWPITGLGITGGVHRLWAHRSYDAHWTVRV++MLINSMANQGSIYHW+RDHRVHHK+SE DADPHNA RGFFFAHMGWLYVKKHP VI AGRTL+FSDLE DPVVMFQD+LDPWFALFMCF FP LVAK WG++FW GFWVAGALRYC VLH TW VNSAAHMFGDHPYD SWP+ENP VS+ ++GEGWHNW
Sbjct: 13 RFLTLNPITLARDTAEAVAYHYKEGNINWPMGAYITLVHVAAVVGLCYVPVASWQTRLWAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVYLMLINSMANQGSIYHWARDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPAVIAAGRTLDFSDLERDPVVMFQDKLDPWFALFMCFFFPGLVAKFGWGDNFWVGFWVAGALRYCWVLHCTWMVNSAAHMFGDHPYD-ASWPAENPLVSLLSVGEGWHNW 267
BLAST of mRNA_S-dermatodea_contig8813.16951.1 vs. uniprot
Match: A0A835YYM0_9STRA (Stearoyl-CoA desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM0_9STRA) HSP 1 Score: 451 bits (1161), Expect = 1.030e-157 Identity = 200/260 (76.92%), Postives = 226/260 (86.92%), Query Frame = 1
Query: 25 VLDGRALTLNPITLTKDTVETVVYHWKNKSINWPMSIYITLVHLAAVVGFCTIPECKWQTCLMAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVFMMLINSMANQGSIYHWSRDHRVHHKYSEQDADPHNATRGFFFAHMGWLYVKKHPDVIKAGRTLNFSDLEADPVVMFQDRLDPWFALFMCFVFPSLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNW 804
++ R +TLNPI+LT+DTV +HW+ + NWPM IYITLVH+AA++G +P W+T L+AF LWPI+GLGITGGVHRLWAHRSY+AHW+VRVF+MLINS+ANQGSIYHWSRDHRVHHK+SE DADPHNA RGFFFAHMGWLYVKKHP+VI AGRTL+FSDLE DPVVMFQDRLDPWFALFMCF FP LVAK+ WGE+FW GFWVAGALRYC VLH TW VNSAAHMFGDHPYD SWP+ENP VSI A+GEGWHNW
Sbjct: 18 IMKQRHMTLNPISLTRDTVAACRHHWREGTFNWPMGIYITLVHVAAIIGVMNVPAASWKTQLLAFALWPISGLGITGGVHRLWAHRSYEAHWSVRVFLMLINSIANQGSIYHWSRDHRVHHKHSETDADPHNAQRGFFFAHMGWLYVKKHPEVIAAGRTLDFSDLERDPVVMFQDRLDPWFALFMCFFFPGLVAKYGWGENFWVGFWVAGALRYCWVLHCTWCVNSAAHMFGDHPYD-NSWPAENPVVSILAVGEGWHNW 276
BLAST of mRNA_S-dermatodea_contig8813.16951.1 vs. uniprot
Match: A0A4D9CQB7_9STRA (FA_desaturase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQB7_9STRA) HSP 1 Score: 406 bits (1044), Expect = 3.560e-140 Identity = 178/247 (72.06%), Postives = 202/247 (81.78%), Query Frame = 1
Query: 64 LTKDTVETVVYHWKNKSINWPMSIYITLVHLAAVVGFCTIPECKWQTCLMAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVFMMLINSMANQGSIYHWSRDHRVHHKYSEQDADPHNATRGFFFAHMGWLYVKKHPDVIKAGRTLNFSDLEADPVVMFQDRLDPWFALFMCFVFPSLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNW 804
L +D V +VYH+K ++NWPM IY+ L HLAA +G +IP CKWQT L AFILWPITGLGIT GVHRLWAHRSY A R+ +ML NS+ANQGSIYHWSRDHRVHHKYSE DADPHNATRGFFFAHMGWL VKKHP V++ G+ L+FSDL ADPVV FQ DPWFA FMCFV P+LVA++ WGE FW+ FWVAG LRYC+VLHFTW VNSAAH++GDHPYD WP+ENP VS+ AIGEGWHNW
Sbjct: 5 LARDAVSALVYHYKEGNLNWPMIIYLVLAHLAAYMGLVSIPSCKWQTLLEAFILWPITGLGITAGVHRLWAHRSYTATLPYRILLMLFNSIANQGSIYHWSRDHRVHHKYSETDADPHNATRGFFFAHMGWLIVKKHPKVVEGGKQLDFSDLAADPVVRFQRDWDPWFAQFMCFVMPALVARYFWGEAFWNAFWVAGGLRYCLVLHFTWMVNSAAHLYGDHPYDPTIWPAENPLVSVVAIGEGWHNW 251
BLAST of mRNA_S-dermatodea_contig8813.16951.1 vs. uniprot
Match: A0A7S2UX82_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX82_9STRA) HSP 1 Score: 404 bits (1038), Expect = 1.090e-139 Identity = 179/245 (73.06%), Postives = 205/245 (83.67%), Query Frame = 1
Query: 70 KDTVETVVYHWKNKSINWPMSIYITLVHLAAVVGFCTIPECKWQTCLMAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVFMMLINSMANQGSIYHWSRDHRVHHKYSEQDADPHNATRGFFFAHMGWLYVKKHPDVIKAGRTLNFSDLEADPVVMFQDRLDPWFALFMCFVFPSLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNW 804
K+ ++T VYH+K ++NWPM +YITLVH+AA VG T+P+C WQT L AFILWPI+G GITGGVHRLW+HRSY A R +ML NS+ANQGSIYHWSRDHRVHHK+SE DADPHNATRGFFFAHMGWL VKKHPDVIKAG+ L+FSDL ADPVV+FQ R DPWFALFMCFV P LV WG++FW+G+WVAGALRY VLH TW VNSAAH++GDHPYD KSWP+ENP VS A+GEGWHNW
Sbjct: 7 KNALDTCVYHYKEGNVNWPMVVYITLVHVAACVGIWTVPKCTWQTLLWAFILWPISGFGITGGVHRLWSHRSYKARLPYRFVVMLANSIANQGSIYHWSRDHRVHHKHSETDADPHNATRGFFFAHMGWLLVKKHPDVIKAGKELDFSDLLADPVVVFQKRTDPWFALFMCFVLPGLVCT-LWGDNFWNGYWVAGALRYVYVLHCTWLVNSAAHLYGDHPYDPKSWPAENPMVSYAALGEGWHNW 250
BLAST of mRNA_S-dermatodea_contig8813.16951.1 vs. uniprot
Match: A0A7S1ZS88_TRICV (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S1ZS88_TRICV) HSP 1 Score: 403 bits (1035), Expect = 6.510e-139 Identity = 177/247 (71.66%), Postives = 210/247 (85.02%), Query Frame = 1
Query: 64 LTKDTVETVVYHWKNKSINWPMSIYITLVHLAAVVGFCTIPECKWQTCLMAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVFMMLINSMANQGSIYHWSRDHRVHHKYSEQDADPHNATRGFFFAHMGWLYVKKHPDVIKAGRTLNFSDLEADPVVMFQDRLDPWFALFMCFVFPSLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNW 804
+ +D V++H+K +INWPM IYI+LVH+ A VG TIP+C +T L AFILWPI+G GIT GVHRLW+HRSY+A RVF+ML NS+ANQGSI+HW+RDHRVHHKYSE DADPHNATRGFFFAHMGWL+VKKHPDV+KAGR L+F+DL DPVVMFQ +LDPWF L+M +VFP+ VA + WGE+FW+GF+VAGALRY VVLHFTWFVNSAAH++GDHPYD S+P+ENPFVS CAIGEGWHNW
Sbjct: 7 MVRDIPSLVMHHYKEGNINWPMGIYISLVHVVAFVGLFTIPKCSAETLLWAFILWPISGFGITVGVHRLWSHRSYEAALPARVFLMLCNSIANQGSIFHWARDHRVHHKYSETDADPHNATRGFFFAHMGWLFVKKHPDVVKAGRELDFTDLSEDPVVMFQKKLDPWFTLYMSYVFPAQVASYFWGEEFWNGFFVAGALRYAVVLHFTWFVNSAAHLYGDHPYDVLSYPAENPFVSYCAIGEGWHNW 253
BLAST of mRNA_S-dermatodea_contig8813.16951.1 vs. uniprot
Match: A0A7R9W6B6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6B6_9STRA) HSP 1 Score: 400 bits (1029), Expect = 8.580e-139 Identity = 172/247 (69.64%), Postives = 208/247 (84.21%), Query Frame = 1
Query: 64 LTKDTVETVVYHWKNKSINWPMSIYITLVHLAAVVGFCTIPECKWQTCLMAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVFMMLINSMANQGSIYHWSRDHRVHHKYSEQDADPHNATRGFFFAHMGWLYVKKHPDVIKAGRTLNFSDLEADPVVMFQDRLDPWFALFMCFVFPSLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNW 804
+ +D + +HW+ K+ NWPM IYI+LVH+ A+VG TIP+C +T + AFILWPI+G GIT GVHRLW+HRSY+A + R+F+ML NS+ANQGSI+HW+RDHRVHHKYSE DADPHNATRGFFFAHMGWL++KKHPDV+KAGR L+F+DL DP+VMFQ +LDPWF L+MC VFP+ VA H WGE FW+ F+VAG LRY VVLHFTWFVNSAAH++GDHPYD S+P+ENPFVS CAIGEGWHNW
Sbjct: 25 MVRDIPSVLSHHWEKKTFNWPMIIYISLVHVVALVGLFTIPKCSAETLIWAFILWPISGFGITVGVHRLWSHRSYEAAFPARLFLMLCNSIANQGSIFHWARDHRVHHKYSETDADPHNATRGFFFAHMGWLFIKKHPDVVKAGRELDFTDLLEDPIVMFQKKLDPWFTLYMCNVFPAQVASHFWGEQFWNAFFVAGCLRYAVVLHFTWFVNSAAHLYGDHPYDVLSYPAENPFVSYCAIGEGWHNW 271
BLAST of mRNA_S-dermatodea_contig8813.16951.1 vs. uniprot
Match: A0A7S3UXY6_HETAK (Hypothetical protein n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXY6_HETAK) HSP 1 Score: 399 bits (1025), Expect = 1.330e-137 Identity = 177/247 (71.66%), Postives = 204/247 (82.59%), Query Frame = 1
Query: 64 LTKDTVETVVYHWKNKSINWPMSIYITLVHLAAVVGFCTIPECKWQTCLMAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVFMMLINSMANQGSIYHWSRDHRVHHKYSEQDADPHNATRGFFFAHMGWLYVKKHPDVIKAGRTLNFSDLEADPVVMFQDRLDPWFALFMCFVFPSLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNW 804
L KD+V T VYH K+ ++NWPM IYI LVH+A G I +WQT L AF LWPI+G GITGGVHRLW+HRSY A++ R F ML NS+ANQGSIYHW+RDHRVHHK+SE DADPHNATRGFFFAHMGWL VKKHPDV+KAGR L+FSDL+AD VMFQ +LDPWF LFMCFVFP+LV + WGEDFW GF+VAGA+RY VLH TW VNSAAH++GDHPYD +SWP+ENPFVS+ A+GEGWHNW
Sbjct: 6 LIKDSVTTSVYHLKHGNVNWPMLIYIALVHVAGFYGLMLITSSQWQTLLWAFTLWPISGFGITGGVHRLWSHRSYKANFIFRFFTMLANSIANQGSIYHWARDHRVHHKHSETDADPHNATRGFFFAHMGWLLVKKHPDVVKAGRELDFSDLDADWTVMFQKKLDPWFTLFMCFVFPALVGTYGWGEDFWTGFYVAGAVRYIYVLHVTWLVNSAAHLYGDHPYDPQSWPAENPFVSLGALGEGWHNW 252
BLAST of mRNA_S-dermatodea_contig8813.16951.1 vs. uniprot
Match: A0A7S2DXG6_9STRA (Hypothetical protein n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2DXG6_9STRA) HSP 1 Score: 396 bits (1017), Expect = 1.310e-135 Identity = 172/245 (70.20%), Postives = 205/245 (83.67%), Query Frame = 1
Query: 70 KDTVETVVYHWKNKSINWPMSIYITLVHLAAVVGFCTIPECKWQTCLMAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVFMMLINSMANQGSIYHWSRDHRVHHKYSEQDADPHNATRGFFFAHMGWLYVKKHPDVIKAGRTLNFSDLEADPVVMFQDRLDPWFALFMCFVFPSLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNW 804
+D V YH+K +INWPM IYITLVH+ AVVG T+P+C +T L AF+LWPI+G GIT GVHRLW+HRSY+A + VR+F+ML NS+ANQGSI+HW+RDHRVHHKYSE DADPHNATRGFFFAHMGWLYV+KHPDV+KAGR L+FSDL D +VMFQ +LDPWF L+MCFV P+ VA WGE+FW+ F+VAG LRY VVLHFTW VNSAAH++GDHPYD S+P+ENP VS C++GEGWHNW
Sbjct: 46 RDIPSLVSYHYKEGNINWPMGIYITLVHVVAVVGLFTVPKCSAETLLWAFVLWPISGFGITVGVHRLWSHRSYEASFVVRLFLMLCNSIANQGSIFHWARDHRVHHKYSETDADPHNATRGFFFAHMGWLYVRKHPDVVKAGRELDFSDLYEDSLVMFQKKLDPWFTLYMCFVMPAQVAAAFWGEEFWNAFFVAGCLRYAVVLHFTWLVNSAAHLYGDHPYDVLSYPAENPIVSFCSVGEGWHNW 290
BLAST of mRNA_S-dermatodea_contig8813.16951.1 vs. uniprot
Match: A0A7S2UMM7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMM7_9STRA) HSP 1 Score: 394 bits (1012), Expect = 2.050e-135 Identity = 170/249 (68.27%), Postives = 205/249 (82.33%), Query Frame = 1
Query: 58 ITLTKDTVETVVYHWKNKSINWPMSIYITLVHLAAVVGFCTIPECKWQTCLMAFILWPITGLGITGGVHRLWAHRSYDAHWTVRVFMMLINSMANQGSIYHWSRDHRVHHKYSEQDADPHNATRGFFFAHMGWLYVKKHPDVIKAGRTLNFSDLEADPVVMFQDRLDPWFALFMCFVFPSLVAKHSWGEDFWHGFWVAGALRYCVVLHFTWFVNSAAHMFGDHPYDHKSWPSENPFVSICAIGEGWHNW 804
I + +D + V HWK+ ++NWPM IYITLVH+ A VG ++ +C T + AFILWPI+G GIT GVHRLW+HRSY+A VR+F+ML NS++NQGSI+HW+RDHRVHHKYSE DADPHNATRGFFFAHMGWL+VKKHPDV+ AGR L+FSDL D VMFQ +LDPWF L+MCFV P+ VA H WGEDFW+ F+VAGALRY +VLHFTW VNSAAH++GDHPYD+ S+PSENP VS C++GEGWHNW
Sbjct: 5 IQMFRDIPKVVSQHWKDGTLNWPMGIYITLVHIVAAVGLFSVQKCSRDTLMFAFILWPISGFGITVGVHRLWSHRSYEAAAPVRLFLMLCNSISNQGSIFHWARDHRVHHKYSETDADPHNATRGFFFAHMGWLFVKKHPDVVAAGRQLDFSDLSEDAFVMFQKKLDPWFTLYMCFVMPAQVASHFWGEDFWNAFFVAGALRYVIVLHFTWLVNSAAHLYGDHPYDYLSYPSENPIVSFCSVGEGWHNW 253 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8813.16951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8813.16951.1 >prot_S-dermatodea_contig8813.16951.1 ID=prot_S-dermatodea_contig8813.16951.1|Name=mRNA_S-dermatodea_contig8813.16951.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=269bp MASDAADTVLDGRALTLNPITLTKDTVETVVYHWKNKSINWPMSIYITLVback to top mRNA from alignment at S-dermatodea_contig8813:2578..8972+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8813.16951.1 ID=mRNA_S-dermatodea_contig8813.16951.1|Name=mRNA_S-dermatodea_contig8813.16951.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6395bp|location=Sequence derived from alignment at S-dermatodea_contig8813:2578..8972+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8813:2578..8972+ >mRNA_S-dermatodea_contig8813.16951.1 ID=mRNA_S-dermatodea_contig8813.16951.1|Name=mRNA_S-dermatodea_contig8813.16951.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1614bp|location=Sequence derived from alignment at S-dermatodea_contig8813:2578..8972+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |