mRNA_S-dermatodea_contig881.16947.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig881.16947.1 vs. uniprot
Match: D8LBQ0_ECTSI (Peroxisomal enoyl-coenzyme A hydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBQ0_ECTSI) HSP 1 Score: 423 bits (1088), Expect = 4.900e-144 Identity = 223/333 (66.97%), Postives = 246/333 (73.87%), Query Frame = 2
Query: 86 MYDDFETLLVSTPGPRVLHVQINRPAKRNAMNAKFWVEFRECFERIAEDSDARVVVVSGAGDHFSAGLDLEDTSNFDGIAKATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLVCACDIRLCSEDAGFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAFTGRNFGATEAARIGLVSRTLGPG--------------------------------------SRREEVVQACLLIGADIARQSPVAVFGTKRNLMYGRDHSVADGLEYAATWSGSGLQTEDLEKAMRAGASRTKRGGKK--------ASHPEFSKL 946
MYD FETL VS P VLHVQINRP+KRNAMNAKFW+E R+CF+ I+ED+D R VVVSG GDHFSAGLDL DT+NFD I +ATKDVARRAFRFRKLALAMQESF+AVERCPQPVIAAIHGACVGGAVDL CACDIRLCSEDAGFC+AEVKVGLAADVGTLQRMP+IVGNESLCRELA+TGR FGA EA+R+G VSR + S+R EVV A +L ++IARQSPVAVFGTKRNL+Y RDHSV DGLEYAATWSG+ LQ DL AMRA A KR G++ SHP FSKL
Sbjct: 1 MYDGFETLFVSFPARYVLHVQINRPSKRNAMNAKFWIECRDCFQLISEDADVRAVVVSGMGDHFSAGLDLSDTTNFDAIGRATKDVARRAFRFRKLALAMQESFTAVERCPQPVIAAIHGACVGGAVDLACACDIRLCSEDAGFCVAEVKVGLAADVGTLQRMPKIVGNESLCRELAYTGRTFGAAEASRMGFVSRVVAAPEAATXXXXXXXXXXXXTAGGKPRAVXXXXXXXXXXXRRSQRAEVVAASILTASEIARQSPVAVFGTKRNLLYARDHSVVDGLEYAATWSGAALQAGDLSTAMRAAAGNPKRSGRREAGAGAEAGSHPHFSKL 333
BLAST of mRNA_S-dermatodea_contig881.16947.1 vs. uniprot
Match: A0A6P8I096_ACTTE (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I096_ACTTE) HSP 1 Score: 293 bits (751), Expect = 2.910e-93 Identity = 159/284 (55.99%), Postives = 192/284 (67.61%), Query Frame = 2
Query: 98 FETLLVSTPGPRVLHVQINRPAKRNAMNAKFWVEFRECFERIAEDSDARVVVVSGAGDHFSAGLDLEDTSN-FDGIAKATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLVCACDIRLCSEDAGFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAFTGRNFGATEAARIGLVSRTLGPGSRREEVVQACLLIGADIARQSPVAVFGTKRNLMYGRDHSVADGLEYAATWSGSGLQTEDLEKAMRAGASRTKRGGKKASHPEFSKL 946
+ETL VS P VL V++NRP KRNAMN FW E ECF +I DSD R VVV+GAG F+AGLDL D + F D AR+A RK+ L+ QESFS +E+CP+PVIAAIH AC+GG VDLVCACDIRLCS DA F I EV +GLAADVGTLQR+P+IVGN+SL REL++T R A EA GLVS +E ++ A + + IA +SPVAV GTK NL Y RDHSV +GL Y ATW+ S LQTED+ KA++A ++ K P FSKL
Sbjct: 50 YETLAVSQPADHVLRVELNRPEKRNAMNQAFWREMVECFNKITNDSDCRXVVVTGAGKIFTAGLDLMDMAGVFMQAGPENADAARKAAELRKIILSYQESFSVIEKCPKPVIAAIHSACIGGGVDLVCACDIRLCSSDAWFQIKEVDIGLAADVGTLQRLPKIVGNDSLVRELSYTARRLPANEAKEAGLVSHIY---PDKESLISAATAMASKIASKSPVAVMGTKHNLNYSRDHSVEEGLNYMATWNMSMLQTEDIMKAVQAEMAKEK--------PTFSKL 322
BLAST of mRNA_S-dermatodea_contig881.16947.1 vs. uniprot
Match: UPI001F04F430 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04F430) HSP 1 Score: 291 bits (746), Expect = 1.040e-92 Identity = 157/288 (54.51%), Postives = 197/288 (68.40%), Query Frame = 2
Query: 83 MMYDDFETLLVSTPGPRVLHVQINRPAKRNAMNAKFWVEFRECFERIAEDSDARVVVVSGAGDHFSAGLDLEDTSNFDGIAKATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLVCACDIRLCSEDAGFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAFTGRNFGATEAARIGLVSRTLGPGSRREEVVQACLLIGADIARQSPVAVFGTKRNLMYGRDHSVADGLEYAATWSGSGLQTEDLEKAMRAGASRTKRGGKKASHPEFSKL 946
++ DFETL ++ P V V INRP KRNAMN FW E CFE+IA +SD RVVV+S AG F+AGLDL D S+ + + KDV+R+A+ RK + QESFS +ERCPQPVIAAIH ACVGG VD++C+CDIR C+ DA F I EV++GLAADVGTLQR+P+IVGNESL REL FT R F A EA GLVSR +E ++ L + + IA+ SP+A+ GTK+NL Y RDH V + LEY ATW+ S LQTED+ KA++AG ++ FSKL
Sbjct: 33 LLNHDFETLELTQPRNHVYQVNINRPEKRNAMNQTFWKEMVTCFEKIANESDCRVVVLSAAGKIFTAGLDLMDFSSIV-LQQDDKDVSRKAYNMRKTIVQCQESFSVIERCPQPVIAAIHSACVGGGVDMICSCDIRWCTSDAWFQIKEVELGLAADVGTLQRLPKIVGNESLVRELCFTARKFMAEEAKSFGLVSRIF---QDKESLLNGALDLASHIAKMSPIAITGTKKNLNYSRDHGVDESLEYMATWNMSMLQTEDILKAVQAGMNK--------EEASFSKL 308
BLAST of mRNA_S-dermatodea_contig881.16947.1 vs. uniprot
Match: A0A7D9IU21_PARCT (Delta(3,5)-Delta(2,4)-dienoyl- isomerase, mitochondrial n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IU21_PARCT) HSP 1 Score: 287 bits (734), Expect = 7.830e-91 Identity = 153/283 (54.06%), Postives = 192/283 (67.84%), Query Frame = 2
Query: 98 FETLLVSTPGPRVLHVQINRPAKRNAMNAKFWVEFRECFERIAEDSDARVVVVSGAGDHFSAGLDLEDTSNFDGIAKATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLVCACDIRLCSEDAGFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAFTGRNFGATEAARIGLVSRTLGPGSRREEVVQACLLIGADIARQSPVAVFGTKRNLMYGRDHSVADGLEYAATWSGSGLQTEDLEKAMRAGASRTKRGGKKASHPEFSKL 946
FETL V+ P V V INRP KRNAMN FW E CF +IA D++ R VV+SGAG F+AGLDL D ++ + +DV+RRA+ RK L QESFS +E+CPQPVIAAIH ACVGG VD++CACDIR C+ DA F + EV++GLAADVGTLQR+P+IVGNESL REL +T R + EA GLVSR RE ++ + L + + IA+ SPVAV GTK NL Y RDH V + LEY A+W+ S LQT+D+ KA++AG ++ P FSKL
Sbjct: 42 FETLEVTKPRDHVFQVNINRPEKRNAMNQTFWSEMVTCFNKIATDTECRAVVLSGAGKIFTAGLDLMDMASVIMSQQDDQDVSRRAYNMRKTILQFQESFSVIEKCPQPVIAAIHSACVGGGVDMICACDIRWCTSDAWFQVKEVELGLAADVGTLQRLPKIVGNESLVRELCYTSRKLMSEEAKSFGLVSRIF---QDRESLIDSALDLASHIAKMSPVAVSGTKHNLNYSRDHPVDESLEYIASWNMSMLQTDDILKAVQAGMNK--------EEPTFSKL 313
BLAST of mRNA_S-dermatodea_contig881.16947.1 vs. uniprot
Match: A0A2B4RA31_STYPI (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=3 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RA31_STYPI) HSP 1 Score: 286 bits (732), Expect = 2.090e-90 Identity = 149/283 (52.65%), Postives = 198/283 (69.96%), Query Frame = 2
Query: 98 FETLLVSTPGPRVLHVQINRPAKRNAMNAKFWVEFRECFERIAEDSDARVVVVSGAGDHFSAGLDLEDTSNFDGIAKATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLVCACDIRLCSEDAGFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAFTGRNFGATEAARIGLVSRTLGPGSRREEVVQACLLIGADIARQSPVAVFGTKRNLMYGRDHSVADGLEYAATWSGSGLQTEDLEKAMRAGASRTKRGGKKASHPEFSKL 946
FETL V+ P V+ V++NRP KRNAMN FW E +CF +IA+D+D R VV++GAG F+AGLDL D + + + + +RRA RKL L +Q+SF +E+CPQPVIAA H ACVGG VD++C+CDIRLCS DA F I E+ +GLAAD+GTLQ+ P+I+GN+SL REL FTGR F A EA + G VSR + PG R+ +V+ L + IA++SPVA+ GTK NL + RDHS +GLEY ATW+ + LQTED+ KA+++G ++ P FSKL
Sbjct: 53 FETLAVTKPLDHVIQVELNRPDKRNAMNGTFWREMVDCFRQIADDADCRAVVLTGAGKIFTAGLDLMDMGS--NLMSSDLEPSRRAHLLRKLILFLQDSFRTIEKCPQPVIAAFHSACVGGGVDMICSCDIRLCSSDAWFQIKEIDIGLAADLGTLQKFPKIIGNDSLARELCFTGRRFTAEEALQFGFVSR-VSPG--RDSLVKEALELAGQIAKKSPVAMAGTKHNLNFSRDHSAQEGLEYMATWNMAMLQTEDILKAVQSGMNK--------EEPVFSKL 322
BLAST of mRNA_S-dermatodea_contig881.16947.1 vs. uniprot
Match: UPI00109BEF07 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BEF07) HSP 1 Score: 283 bits (723), Expect = 3.200e-89 Identity = 155/300 (51.67%), Postives = 202/300 (67.33%), Query Frame = 2
Query: 68 LWNKKMMYDD----FETLLVSTPGPRVLHVQINRPAKRNAMNAKFWVEFRECFERIAEDSDARVVVVSGAGDHFSAGLDLEDTSNFDGIAKAT---KDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLVCACDIRLCSEDAGFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAFTGRNFGATEAARIGLVSRTLGPGSRREEVVQACLLIGADIARQSPVAVFGTKRNLMYGRDHSVADGLEYAATWSGSGLQTEDLEKAMRAGASRTKRGGKKASHPEFSKL 946
L+ K M++ FETL VS P V V++NRP KRNAMN FW E RECF +I+ D+D R VV++GAG F+AGLDL + + + ++T +D++R+A + R + L QESF+ +++C +PVIAAIH ACVGG VD++CACDIRLCS DA F + EV++GLAADVGTLQR+P+I+GNESL REL +T R F A EA GLVS RE +V A L + + IA+ SPVAV GTK NL Y RDH V + L Y ATW+ S LQ+ED+ KA++AG S+ P FSKL
Sbjct: 24 LFKKARMFNSDAYKFETLAVSQPSQNVFQVELNRPEKRNAMNQVFWREMRECFSKISSDADCRAVVLTGAGKIFTAGLDLMEMAGV--LMQSTGGDQDISRKAAKLRDVVLQYQESFTVIDKCSKPVIAAIHSACVGGGVDMICACDIRLCSADAWFQVKEVELGLAADVGTLQRLPKIIGNESLVRELCYTARRFLAHEAKDAGLVSHIY---PDRESLVSAALNMASTIAKMSPVAVMGTKHNLNYSRDHGVDEALNYIATWNMSMLQSEDILKAVQAGMSK--------EEPIFSKL 310
BLAST of mRNA_S-dermatodea_contig881.16947.1 vs. uniprot
Match: L8YC16_TUPCH (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Tupaia chinensis TaxID=246437 RepID=L8YC16_TUPCH) HSP 1 Score: 283 bits (725), Expect = 5.580e-89 Identity = 149/264 (56.44%), Postives = 193/264 (73.11%), Query Frame = 2
Query: 95 DFETLLVSTPGPRVLHVQINRPAKRNAMNAKFWVEFRECFERIAEDSDARVVVVSGAGDHFSAGLDLEDTSNFDGIAKATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLVCACDIRLCSEDAGFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAFTGRNFGATEAARIGLVSRTLGPGSRREEVVQACLLIGADIARQSPVAVFGTKRNLMYGRDHSVADGLEYAATWSGSGLQTEDLEKAMRA 886
++E+LLV++ VLHVQ+NRP KRNAMN FW E ECF +IA+DSD RVVV+SGAG F+AG+DL D ++ D + DVAR ++ R L QE+F+ +E+CP+PVIAAIHG C+GG VDLV ACDIR C++DA F + EV VGLAADVGTLQR+PRI+GN+SL ELAFT R A EA GLVSR +E ++ A + A+I+ +SPVAV GTK NL+Y RDHSVA+GL+Y +TW+ S LQTED+ K+++A
Sbjct: 75 NYESLLVTSAQKHVLHVQLNRPDKRNAMNKAFWSEMVECFNKIAQDSDCRVVVISGAGKMFTAGIDLVDMAS-DLLQPHGDDVARISWYLRNLITRYQETFNVIEKCPKPVIAAIHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPRIIGNQSLVNELAFTCRKMMADEALGSGLVSRVF---PNKEAMLDAAFALAAEISSKSPVAVQGTKVNLVYARDHSVAEGLKYMSTWNMSMLQTEDVVKSVQA 334
BLAST of mRNA_S-dermatodea_contig881.16947.1 vs. uniprot
Match: UPI00188DF257 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Talpa occidentalis TaxID=50954 RepID=UPI00188DF257) HSP 1 Score: 281 bits (719), Expect = 2.280e-88 Identity = 145/264 (54.92%), Postives = 192/264 (72.73%), Query Frame = 2
Query: 95 DFETLLVSTPGPRVLHVQINRPAKRNAMNAKFWVEFRECFERIAEDSDARVVVVSGAGDHFSAGLDLEDTSNFDGIAKATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLVCACDIRLCSEDAGFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAFTGRNFGATEAARIGLVSRTLGPGSRREEVVQACLLIGADIARQSPVAVFGTKRNLMYGRDHSVADGLEYAATWSGSGLQTEDLEKAMRA 886
++E+LLV + VLHVQINRP KRNAMN FW E ECF +IAED+D RVVV+SGAG F+AG+DL D ++ D + +DVAR ++ R+ QE+FS +E+CP+PVIAAIHG C+GG VDL+ ACDIR C++DA F + EV VGLAADVGTLQR+PR++GN+SL ELAFT R A EA GLVSR ++ ++ A + A+I+ +SPVAV GTK NL+Y RDHSVA+GL Y A+W+ S LQT+D+ ++++A
Sbjct: 54 NYESLLVMSAQKHVLHVQINRPEKRNAMNKAFWREMVECFNKIAEDADCRVVVISGAGKMFTAGIDLMDMAS-DILQPHGEDVARISWNLRRFITKYQETFSVIEKCPKPVIAAIHGGCIGGGVDLITACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPRVIGNQSLVNELAFTARKMMAHEAQECGLVSRVF---PDKQAMLDAAFELAAEISSKSPVAVQGTKVNLVYSRDHSVAEGLNYMASWNMSMLQTDDIVRSVQA 313
BLAST of mRNA_S-dermatodea_contig881.16947.1 vs. uniprot
Match: UPI00140410C0 (delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI00140410C0) HSP 1 Score: 280 bits (716), Expect = 3.500e-88 Identity = 141/263 (53.61%), Postives = 189/263 (71.86%), Query Frame = 2
Query: 98 FETLLVSTPGPRVLHVQINRPAKRNAMNAKFWVEFRECFERIAEDSDARVVVVSGAGDHFSAGLDLEDTSNFDGIAKATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLVCACDIRLCSEDAGFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAFTGRNFGATEAARIGLVSRTLGPGSRREEVVQACLLIGADIARQSPVAVFGTKRNLMYGRDHSVADGLEYAATWSGSGLQTEDLEKAMRA 886
FE+L + G VLHV++NRP KRNAMN W E ECF+R+A+DSD RVVV+SGAG F+AG+DL D + D + DVAR+A++ R L QESFSA+E+CP+PVIAAIH AC+GG +DL+ ACDIRLCS+DA F + EV +G+AADVGTLQR+P+++GN SL EL +T R A EA GLVSR +E +++ + ++IA +SP+AV G+K N++Y RDHSV +GL+Y ATW+ S LQTED+ K+ +A
Sbjct: 36 FESLRATRVGDSVLHVELNRPEKRNAMNKILWREMVECFDRVAQDSDFRVVVISGAGKMFTAGIDLMDMAG-DMLQSEETDVARKAWKLRNTILRFQESFSAIEKCPKPVIAAIHSACIGGGIDLITACDIRLCSQDAWFQVKEVDIGMAADVGTLQRLPKVIGNASLVNELVYTARKMMADEAMSCGLVSRVF---QGKEALLEGAFHLASEIASKSPLAVQGSKLNMIYSRDHSVKEGLDYIATWNMSMLQTEDIVKSAQA 294
BLAST of mRNA_S-dermatodea_contig881.16947.1 vs. uniprot
Match: A0A3S1BDV2_ELYCH (Uncharacterized protein n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1BDV2_ELYCH) HSP 1 Score: 280 bits (715), Expect = 6.600e-88 Identity = 148/284 (52.11%), Postives = 198/284 (69.72%), Query Frame = 2
Query: 95 DFETLLVSTPGPRVLHVQINRPAKRNAMNAKFWVEFRECFERIAEDSDARVVVVSGAGDHFSAGLDLEDTSNFDGIAKATKDVARRAFRFRKLALAMQESFSAVERCPQPVIAAIHGACVGGAVDLVCACDIRLCSEDAGFCIAEVKVGLAADVGTLQRMPRIVGNESLCRELAFTGRNFGATEAARIGLVSRTLGPGSRREEVVQACLLIGADIARQSPVAVFGTKRNLMYGRDHSVADGLEYAATWSGSGLQTEDLEKAMRAGASRTKRGGKKASHPEFSKL 946
+F+TL V +P V HV++NRP + NAMN FW E ECF+++AED D RVV++SG+G F++GLDL D F I A +D +R+AF+ K QESFSA+E+CP+PVIAA+H AC+GG +D++ ACDIR C++DA F I EV VGLAADVGTLQR PRIVGN+SL REL +T R F + EA IG VSR L ++++++ L + + IA +SPVAV G+K NL+Y RDHSV +GL+Y A W+ + LQ+ED+ KA A ++TK P FSKL
Sbjct: 47 EFKTLKVHSPAEFVKHVELNRPERLNAMNMDFWREMVECFDKLAEDEDCRVVILSGSGKAFTSGLDLADNGLFQ-IIMADEDCSRKAFKMNKAIPKFQESFSAIEKCPKPVIAAVHSACIGGGIDMISACDIRFCTQDAWFQIKEVDVGLAADVGTLQRFPRIVGNDSLTRELVYTARKFYSDEAKSIGFVSRVL---VDKDQMMKTALDMASTIAAKSPVAVQGSKINLVYSRDHSVPEGLDYNAKWNITMLQSEDVMKAASAFMNKTK--------PVFSKL 318 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig881.16947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig881.16947.1 >prot_S-dermatodea_contig881.16947.1 ID=prot_S-dermatodea_contig881.16947.1|Name=mRNA_S-dermatodea_contig881.16947.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=289bp MMYDDFETLLVSTPGPRVLHVQINRPAKRNAMNAKFWVEFRECFERIAEDback to top mRNA from alignment at S-dermatodea_contig881:534..3883- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig881.16947.1 ID=mRNA_S-dermatodea_contig881.16947.1|Name=mRNA_S-dermatodea_contig881.16947.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3350bp|location=Sequence derived from alignment at S-dermatodea_contig881:534..3883- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig881:534..3883- >mRNA_S-dermatodea_contig881.16947.1 ID=mRNA_S-dermatodea_contig881.16947.1|Name=mRNA_S-dermatodea_contig881.16947.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1734bp|location=Sequence derived from alignment at S-dermatodea_contig881:534..3883- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |