mRNA_S-dermatodea_contig8736.16878.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8736.16878.1 vs. uniprot
Match: A0A6H5JB93_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB93_9PHAE) HSP 1 Score: 371 bits (952), Expect = 1.260e-125 Identity = 168/182 (92.31%), Postives = 177/182 (97.25%), Query Frame = 1
Query: 1 KHPGGNVIFTHAGDDFTDIFAAFHPPTAYAMLEPFYIGDLDDKSAVVKPAEQRAFERAYRDLRSKLLTMGMYNSDPWYYMMVCSRQMALWATSVACVLYSDRWDVNMLGAFFMAVFWQQCGWLAHDFLHHQVFKNRANGDLAGVFWGNLMQGFSVGWWKNKHNTHHAVPNLHESSADAHDGE 546
+HPGGNVIFTHAGDDFTDIFAAFHPPTAYA+LEPFYIGDLD+KSAV KPA QRAFER+YR+LRSKLLTMGMYNSDPWYY+MVCSRQMALWA SVACV++SDRWDVNMLGAF MAVFWQQCGWLAHDFLHHQVFKNRA GDLAGVFWGNLMQGFSVGWWKNKHNTHHAVPNLHESSADAHDG+
Sbjct: 66 EHPGGNVIFTHAGDDFTDIFAAFHPPTAYAVLEPFYIGDLDEKSAVAKPAAQRAFERSYRELRSKLLTMGMYNSDPWYYVMVCSRQMALWAASVACVVWSDRWDVNMLGAFLMAVFWQQCGWLAHDFLHHQVFKNRAYGDLAGVFWGNLMQGFSVGWWKNKHNTHHAVPNLHESSADAHDGD 247
BLAST of mRNA_S-dermatodea_contig8736.16878.1 vs. uniprot
Match: A0A835YIW8_9STRA (Delta-6 fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIW8_9STRA) HSP 1 Score: 288 bits (737), Expect = 3.230e-93 Identity = 130/181 (71.82%), Postives = 147/181 (81.22%), Query Frame = 1
Query: 4 HPGGNVIFTHAGDDFTDIFAAFHPPTAYAMLEPFYIGDLDDKSAVVKPAEQRAFERAYRDLRSKLLTMGMYNSDPWYYMMVCSRQMALWATSVACVLYSDRWDVNMLGAFFMAVFWQQCGWLAHDFLHHQVFKNRANGDLAGVFWGNLMQGFSVGWWKNKHNTHHAVPNLHESSADAHDGE 546
HPGG+VIFTHAGDD TDIFAAFHPP+AY +EP+ IGDLD S KPA QR FERAYRDLR KL+ GM+NS YY+ CS +A+WA CV+ SD + V+MLGAF +A+FWQQCGWLAHDFLHHQVFKNRA GD AG+FWGN+ QGFSVGWWKNKHNTHHAVPNLH SS DAHDG+
Sbjct: 61 HPGGHVIFTHAGDDATDIFAAFHPPSAYKTMEPYCIGDLDKASVERKPAAQRDFERAYRDLRGKLVVAGMFNSSKAYYVWKCSSNLAIWAAGCLCVILSDSFAVHMLGAFLLALFWQQCGWLAHDFLHHQVFKNRAYGDYAGIFWGNIAQGFSVGWWKNKHNTHHAVPNLHASSPDAHDGD 241
BLAST of mRNA_S-dermatodea_contig8736.16878.1 vs. uniprot
Match: A0A835YVN5_9STRA (Delta-6 desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN5_9STRA) HSP 1 Score: 276 bits (706), Expect = 1.390e-88 Identity = 121/170 (71.18%), Postives = 139/170 (81.76%), Query Frame = 1
Query: 4 HPGGNVIFTHAGDDFTDIFAAFHPPTAYAMLEPFYIGDLDDKSAVVKPAEQRAFERAYRDLRSKLLTMGMYNSDPWYYMMVCSRQMALWATSVACVLYSDRWDVNMLGAFFMAVFWQQCGWLAHDFLHHQVFKNRANGDLAGVFWGNLMQGFSVGWWKNKHNTHHAVPNL 513
HPGG+VIFTHAGDDFTDIFAAFHPP+AY ++PFYIG+LD S +KP QR FE+AYRDLR KL+ GM+NS YY CS +A+WA CV+ SD + V+MLGAF +A+FWQQCGWLAHDFLHHQVFKNRA GD AG+FWGN+ QGFSVGWWKNKHNTHHAVPNL
Sbjct: 58 HPGGHVIFTHAGDDFTDIFAAFHPPSAYKSMDPFYIGELDTPSIEIKPLAQRNFEKAYRDLRGKLVVAGMFNSSKAYYAWKCSSNLAIWAAGCLCVILSDSFAVHMLGAFLLALFWQQCGWLAHDFLHHQVFKNRAYGDYAGIFWGNVAQGFSVGWWKNKHNTHHAVPNL 227
BLAST of mRNA_S-dermatodea_contig8736.16878.1 vs. uniprot
Match: A0A7S2SSB7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSB7_9STRA) HSP 1 Score: 245 bits (626), Expect = 2.220e-76 Identity = 113/181 (62.43%), Postives = 135/181 (74.59%), Query Frame = 1
Query: 4 HPGGNVIFTHAGDDFTDIFAAFHPPTAYAMLEPFYIGDLDDKSAVVKPAEQRAFERAYRDLRSKLLTMGMYNSDPWYYMMVCSRQMALWATSVACVLYSDRWDVNMLGAFFMAVFWQQCGWLAHDFLHHQVFKNRANGDLAGVFWGNLMQGFSVGWWKNKHNTHHAVPNLHESSADAHDGE 546
HPGG VIFTHAGDD TDIFAAFH + AM++ FYIGDL +S K Q FE+ YRDLR+KL+ MGM+ S YY C+ M +W T+VA V YSD + V++ A + +FWQQCGWLAHDFLHHQVFK+R GDLAG+FWG+LMQGFS+ WWKNKHN HHAVPNLH SS D+ DG+
Sbjct: 57 HPGGAVIFTHAGDDMTDIFAAFHAQGSQAMMKKFYIGDLIPESVEHKDQSQLDFEKGYRDLRAKLVMMGMFKSSKGYYAYKCTFNMCMWLTAVAMVYYSDSFAVHIGSALLLGLFWQQCGWLAHDFLHHQVFKHRKYGDLAGIFWGDLMQGFSMQWWKNKHNGHHAVPNLHNSSVDSQDGD 237
BLAST of mRNA_S-dermatodea_contig8736.16878.1 vs. uniprot
Match: W0S9X3_FISSO (Delta6 desaturase-b n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=W0S9X3_FISSO) HSP 1 Score: 243 bits (621), Expect = 9.650e-76 Identity = 112/182 (61.54%), Postives = 136/182 (74.73%), Query Frame = 1
Query: 1 KHPGGNVIFTHAGDDFTDIFAAFHPPTAYAMLEPFYIGDLDDKSAVVKPAEQRAFERAYRDLRSKLLTMGMYNSDPWYYMMVCSRQMALWATSVACVLYSDRWDVNMLGAFFMAVFWQQCGWLAHDFLHHQVFKNRANGDLAGVFWGNLMQGFSVGWWKNKHNTHHAVPNLHESSADAHDGE 546
+HPGG VIFTHAGDD TDIFAAFH P + +++ FYIGDL S K Q AFE+ YRDLRSKL+ MGM+ S+ W+Y+ C M LWAT+VA V YS+ V+M A + +F+QQCGWLAHDFLHHQVF+ R GDL G++WGNLMQG+SV WWKNKHN HHAVPNLH S+A + DG+
Sbjct: 46 EHPGGAVIFTHAGDDMTDIFAAFHAPGSQNLMQKFYIGDLIPGSNQNKTEHQIAFEKGYRDLRSKLILMGMFKSNGWFYVYKCVSNMMLWATAVAMVYYSESVAVHMASAVLLGLFFQQCGWLAHDFLHHQVFRQRKYGDLGGIYWGNLMQGYSVQWWKNKHNGHHAVPNLHNSTALSQDGD 227
BLAST of mRNA_S-dermatodea_contig8736.16878.1 vs. uniprot
Match: A0A7S2RWJ1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RWJ1_9STRA) HSP 1 Score: 239 bits (609), Expect = 1.480e-75 Identity = 108/181 (59.67%), Postives = 138/181 (76.24%), Query Frame = 1
Query: 4 HPGGNVIFTHAGDDFTDIFAAFHPPTAYAMLEPFYIGDLDDKSAVVKPAEQRAFERAYRDLRSKLLTMGMYNSDPWYYMMVCSRQMALWATSVACVLYSDRWDVNMLGAFFMAVFWQQCGWLAHDFLHHQVFKNRANGDLAGVFWGNLMQGFSVGWWKNKHNTHHAVPNLHESSADAHDGE 546
HPGG VIFTHAGDD TDIFAAFH + AM++ FYIG+L +S K Q FE+AYR+LR++L+ MGM+ S+ W+Y C+ M++WAT++A V +SD V++ + + +F+QQCGWLAHDFLHHQVFK R GDLAGVFWGNLMQG+S+ WWKNKHN HHAVPNLH S+A + DG+
Sbjct: 54 HPGGAVIFTHAGDDMTDIFAAFHAQGSQAMIKKFYIGELIPESMTHKNQRQFDFEKAYRELRTQLVMMGMFKSNQWFYAYKCATNMSMWATAMAMVYFSDNVFVHLASSLLLGLFFQQCGWLAHDFLHHQVFKYRKYGDLAGVFWGNLMQGYSMQWWKNKHNGHHAVPNLHNSTATSQDGD 234
BLAST of mRNA_S-dermatodea_contig8736.16878.1 vs. uniprot
Match: A0A7S2IAX4_9STRA (Hypothetical protein (Fragment) n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2IAX4_9STRA) HSP 1 Score: 241 bits (616), Expect = 7.940e-75 Identity = 111/182 (60.99%), Postives = 136/182 (74.73%), Query Frame = 1
Query: 1 KHPGGNVIFTHAGDDFTDIFAAFHPPTAYAMLEPFYIGDLDDKSAVVKPAEQRAFERAYRDLRSKLLTMGMYNSDPWYYMMVCSRQMALWATSVACVLYSDRWDVNMLGAFFMAVFWQQCGWLAHDFLHHQVFKNRANGDLAGVFWGNLMQGFSVGWWKNKHNTHHAVPNLHESSADAHDGE 546
+HPGG VIFTHAGDD TDIFAAFH + AM++ FYIGDL +S K +Q AFE+ YRDLR+KL+ MGM+ S +Y+ CS M +WA +VA V +SD V++ A + +FWQQCGWLAHDFLHHQVFK R GDLAG+FWG+LMQG+S+ WWKNKHN HHAVPNLH +SA DG+
Sbjct: 64 EHPGGAVIFTHAGDDMTDIFAAFHAAGSQAMMKRFYIGDLIPESVEHKDEKQLAFEKGYRDLRAKLVMMGMFKSSKLFYLYKCSFNMCMWAAAVAMVYFSDSVGVHVASALLLGLFWQQCGWLAHDFLHHQVFKQRKYGDLAGIFWGDLMQGYSMQWWKNKHNGHHAVPNLHNTSALTTDGD 245
BLAST of mRNA_S-dermatodea_contig8736.16878.1 vs. uniprot
Match: B7G6R1_PHATC (Delta 6 fatty acid desaturase n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G6R1_PHATC) HSP 1 Score: 240 bits (612), Expect = 2.270e-74 Identity = 111/182 (60.99%), Postives = 139/182 (76.37%), Query Frame = 1
Query: 1 KHPGGNVIFTHAGDDFTDIFAAFHPPTAYAMLEPFYIGDLDDKSAVVKPAEQRAFERAYRDLRSKLLTMGMYNSDPWYYMMVCSRQMALWATSVACVLYSDRWDVNMLGAFFMAVFWQQCGWLAHDFLHHQVFKNRANGDLAGVFWGNLMQGFSVGWWKNKHNTHHAVPNLHESSADAHDGE 546
+HPGG VIFTHAGDD TDIFAAFH P + ++++ FYIG+L ++ +P +Q AFE+ YRDLRSKL+ MGM+ S+ W+Y+ C MA+WA + A V YSDR+ V++ A + F+QQ GWLAHDFLHHQVF R +GDL G+FWGNLMQG+SV WWKNKHN HHAVPNLH SSA A DG+
Sbjct: 49 EHPGGAVIFTHAGDDMTDIFAAFHAPGSQSLMKKFYIGELLPETTGKEP-QQIAFEKGYRDLRSKLIMMGMFKSNKWFYVYKCLSNMAIWAAACALVFYSDRFWVHLASAVMLGTFFQQSGWLAHDFLHHQVFTKRKHGDLGGLFWGNLMQGYSVQWWKNKHNGHHAVPNLHCSSAVAQDGD 229
BLAST of mRNA_S-dermatodea_contig8736.16878.1 vs. uniprot
Match: A0A8J9X751_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X751_PHATR) HSP 1 Score: 240 bits (612), Expect = 2.330e-74 Identity = 111/182 (60.99%), Postives = 139/182 (76.37%), Query Frame = 1
Query: 1 KHPGGNVIFTHAGDDFTDIFAAFHPPTAYAMLEPFYIGDLDDKSAVVKPAEQRAFERAYRDLRSKLLTMGMYNSDPWYYMMVCSRQMALWATSVACVLYSDRWDVNMLGAFFMAVFWQQCGWLAHDFLHHQVFKNRANGDLAGVFWGNLMQGFSVGWWKNKHNTHHAVPNLHESSADAHDGE 546
+HPGG VIFTHAGDD TDIFAAFH P + ++++ FYIG+L ++ +P +Q AFE+ YRDLRSKL+ MGM+ S+ W+Y+ C MA+WA + A V YSDR+ V++ A + F+QQ GWLAHDFLHHQVF R +GDL G+FWGNLMQG+SV WWKNKHN HHAVPNLH SSA A DG+
Sbjct: 49 EHPGGAVIFTHAGDDMTDIFAAFHAPGSQSLMKKFYIGELLPETTGKEP-QQIAFEKGYRDLRSKLIMMGMFKSNKWFYVYKCLSNMAIWAAACALVFYSDRFWVHLASAVMLGTFFQQSGWLAHDFLHHQVFTKRKHGDLGGLFWGNLMQGYSVQWWKNKHNGHHAVPNLHCSSAVAQDGD 229
BLAST of mRNA_S-dermatodea_contig8736.16878.1 vs. uniprot
Match: Q4G2T1_THAPS (Delta-6 fatty acid desaturase n=2 Tax=Thalassiosirales TaxID=33847 RepID=Q4G2T1_THAPS) HSP 1 Score: 240 bits (612), Expect = 2.710e-74 Identity = 110/181 (60.77%), Postives = 131/181 (72.38%), Query Frame = 1
Query: 4 HPGGNVIFTHAGDDFTDIFAAFHPPTAYAMLEPFYIGDLDDKSAVVKPAEQRAFERAYRDLRSKLLTMGMYNSDPWYYMMVCSRQMALWATSVACVLYSDRWDVNMLGAFFMAVFWQQCGWLAHDFLHHQVFKNRANGDLAGVFWGNLMQGFSVGWWKNKHNTHHAVPNLHESSADAHDGE 546
HPGG V+FTHAGDD TDIFAAFH + AM++ FYIGDL +S K Q FE+ YRDLR+KL+ MGM+ S YY CS M +W +VA V YSD +++ A + +FWQQCGWLAHDFLHHQVFK R GDL G+FWG+LMQGFS+ WWKNKHN HHAVPNLH SS D+ DG+
Sbjct: 57 HPGGAVVFTHAGDDMTDIFAAFHAQGSQAMMKKFYIGDLIPESVEHKDQRQLDFEKGYRDLRAKLVMMGMFKSSKMYYAYKCSFNMCMWLVAVAMVYYSDSLAMHIGSALLLGLFWQQCGWLAHDFLHHQVFKQRKYGDLVGIFWGDLMQGFSMQWWKNKHNGHHAVPNLHNSSLDSQDGD 237 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8736.16878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8736.16878.1 >prot_S-dermatodea_contig8736.16878.1 ID=prot_S-dermatodea_contig8736.16878.1|Name=mRNA_S-dermatodea_contig8736.16878.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=187bp KHPGGNVIFTHAGDDFTDIFAAFHPPTAYAMLEPFYIGDLDDKSAVVKPAback to top mRNA from alignment at S-dermatodea_contig8736:74..1984- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8736.16878.1 ID=mRNA_S-dermatodea_contig8736.16878.1|Name=mRNA_S-dermatodea_contig8736.16878.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1911bp|location=Sequence derived from alignment at S-dermatodea_contig8736:74..1984- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8736:74..1984- >mRNA_S-dermatodea_contig8736.16878.1 ID=mRNA_S-dermatodea_contig8736.16878.1|Name=mRNA_S-dermatodea_contig8736.16878.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1122bp|location=Sequence derived from alignment at S-dermatodea_contig8736:74..1984- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |