mRNA_S-dermatodea_contig85288.16695.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig85288.16695.1 vs. uniprot
Match: D7G426_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G426_ECTSI) HSP 1 Score: 69.7 bits (169), Expect = 7.700e-13 Identity = 32/36 (88.89%), Postives = 32/36 (88.89%), Query Frame = 1
Query: 1 RYANLLNPLDLGHTQLKNRVLMGSMHTGLEEGGTFG 108
RYANLL PLDLGHTQLKNRVLMGSMHTGLEE G G
Sbjct: 3 RYANLLKPLDLGHTQLKNRVLMGSMHTGLEERGVLG 38
BLAST of mRNA_S-dermatodea_contig85288.16695.1 vs. uniprot
Match: A0A0L0F757_9EUKA (Oxidored_FMN domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0F757_9EUKA) HSP 1 Score: 63.5 bits (153), Expect = 4.230e-12 Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 1
Query: 1 RYANLLNPLDLGHTQLKNRVLMGSMHTGLEEGGTF 105
+YA++L PLDLG T LKNRVLMGSMHTGLEEGG F
Sbjct: 38 KYAHMLKPLDLGFTTLKNRVLMGSMHTGLEEGGVF 72
BLAST of mRNA_S-dermatodea_contig85288.16695.1 vs. uniprot
Match: A0A835Z979_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z979_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.140e-10 Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 1
Query: 1 RYANLLNPLDLGHTQLKNRVLMGSMHTGLEEGG 99
R+ NLL PLDLGHTQLKNR+LMGSMHTGLEE G
Sbjct: 6 RFPNLLKPLDLGHTQLKNRILMGSMHTGLEETG 38
BLAST of mRNA_S-dermatodea_contig85288.16695.1 vs. uniprot
Match: A0A7G2S2D0_9GAMM (NADPH-dependent 2,4-dienoyl-CoA reductase n=3 Tax=Alcanivorax TaxID=59753 RepID=A0A7G2S2D0_9GAMM) HSP 1 Score: 63.2 bits (152), Expect = 1.560e-10 Identity = 27/31 (87.10%), Postives = 31/31 (100.00%), Query Frame = 1
Query: 1 RYANLLNPLDLGHTQLKNRVLMGSMHTGLEE 93
RY+NLL+PLDLGHTQLKNRV+MGSMHTGLE+
Sbjct: 5 RYSNLLSPLDLGHTQLKNRVIMGSMHTGLED 35
BLAST of mRNA_S-dermatodea_contig85288.16695.1 vs. uniprot
Match: A0A1H2SKB7_9GAMM (2,4-dienoyl-CoA reductase (NADPH2) n=2 Tax=Marinobacter TaxID=2742 RepID=A0A1H2SKB7_9GAMM) HSP 1 Score: 62.4 bits (150), Expect = 2.910e-10 Identity = 27/31 (87.10%), Postives = 30/31 (96.77%), Query Frame = 1
Query: 1 RYANLLNPLDLGHTQLKNRVLMGSMHTGLEE 93
RY NLL+PLDLGHTQLKNRV+MGSMHTGLE+
Sbjct: 5 RYQNLLSPLDLGHTQLKNRVIMGSMHTGLED 35
BLAST of mRNA_S-dermatodea_contig85288.16695.1 vs. uniprot
Match: Q0VNU5_ALCBS (2,4-dienoyl-CoA reductase [NADPH] n=16 Tax=Alcanivorax TaxID=59753 RepID=Q0VNU5_ALCBS) HSP 1 Score: 62.4 bits (150), Expect = 2.910e-10 Identity = 26/31 (83.87%), Postives = 31/31 (100.00%), Query Frame = 1
Query: 1 RYANLLNPLDLGHTQLKNRVLMGSMHTGLEE 93
RY+NLL+PLDLGHTQ+KNRV+MGSMHTGLE+
Sbjct: 5 RYSNLLSPLDLGHTQIKNRVIMGSMHTGLED 35
BLAST of mRNA_S-dermatodea_contig85288.16695.1 vs. uniprot
Match: A0A656SL51_VIBPH (Oxidored_FMN domain-containing protein n=5 Tax=Vibrio parahaemolyticus TaxID=670 RepID=A0A656SL51_VIBPH) HSP 1 Score: 57.4 bits (137), Expect = 6.550e-10 Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 1
Query: 4 YANLLNPLDLGHTQLKNRVLMGSMHTGLEE 93
Y NLL PLDLG TQL+NRVLMGSMHTGLEE
Sbjct: 5 YPNLLKPLDLGFTQLRNRVLMGSMHTGLEE 34
BLAST of mRNA_S-dermatodea_contig85288.16695.1 vs. uniprot
Match: A0A8B7MZA8_HYAAZ (2,4-dienoyl-CoA reductase [NADPH]-like n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7MZA8_HYAAZ) HSP 1 Score: 60.5 bits (145), Expect = 1.140e-9 Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 1
Query: 4 YANLLNPLDLGHTQLKNRVLMGSMHTGLEEG 96
Y +LL+PLDLGHT LKNRVLMGSMHTGLEEG
Sbjct: 4 YPHLLSPLDLGHTTLKNRVLMGSMHTGLEEG 34
BLAST of mRNA_S-dermatodea_contig85288.16695.1 vs. uniprot
Match: A0A3R7W5M1_9STRA (Oxidored_FMN domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7W5M1_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 1.280e-9 Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = 1
Query: 1 RYANLLNPLDLGHTQLKNRVLMGSMHTGLEEG 96
+Y++LL PLDLG TQLKNRVLMGSMHTGLEEG
Sbjct: 3 KYSHLLQPLDLGFTQLKNRVLMGSMHTGLEEG 34
BLAST of mRNA_S-dermatodea_contig85288.16695.1 vs. uniprot
Match: A0A484E0L0_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0L0_BRELC) HSP 1 Score: 60.5 bits (145), Expect = 1.390e-9 Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = 1
Query: 1 RYANLLNPLDLGHTQLKNRVLMGSMHTGLEEG 96
+Y++LL PLDLG TQLKNRVLMGSMHTGLEEG
Sbjct: 3 KYSHLLEPLDLGFTQLKNRVLMGSMHTGLEEG 34 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig85288.16695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig85288.16695.1 >prot_S-dermatodea_contig85288.16695.1 ID=prot_S-dermatodea_contig85288.16695.1|Name=mRNA_S-dermatodea_contig85288.16695.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=40bp RYANLLNPLDLGHTQLKNRVLMGSMHTGLEEGGTFGEQQ*back to top mRNA from alignment at S-dermatodea_contig85288:34..153+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig85288.16695.1 ID=mRNA_S-dermatodea_contig85288.16695.1|Name=mRNA_S-dermatodea_contig85288.16695.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=120bp|location=Sequence derived from alignment at S-dermatodea_contig85288:34..153+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig85288:34..153+ >mRNA_S-dermatodea_contig85288.16695.1 ID=mRNA_S-dermatodea_contig85288.16695.1|Name=mRNA_S-dermatodea_contig85288.16695.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=240bp|location=Sequence derived from alignment at S-dermatodea_contig85288:34..153+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |