mRNA_S-dermatodea_contig852.16691.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig852.16691.1 vs. uniprot
Match: D7G7T5_ECTSI (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T5_ECTSI) HSP 1 Score: 220 bits (561), Expect = 3.100e-70 Identity = 106/112 (94.64%), Postives = 107/112 (95.54%), Query Frame = 3
Query: 93 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTESEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEREAKKAYQLELAGKMDPGTQVAPMAM 428
MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTE EWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDP LE+EAKKAYQ ELA KMDPGT VAPMAM
Sbjct: 1 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQELADKMDPGTNVAPMAM 112
BLAST of mRNA_S-dermatodea_contig852.16691.1 vs. uniprot
Match: A0A7S2BBH9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BBH9_9STRA) HSP 1 Score: 172 bits (437), Expect = 3.270e-51 Identity = 80/106 (75.47%), Postives = 90/106 (84.91%), Query Frame = 3
Query: 99 ARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTESEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEREAKKAYQLELAGKMDPGTQVA 416
ARIEYSEKYQDD +EYRHVILPK+LAK LPK+R+L+E EWRG+GVQQSRGW HYAIHRPEPHILLF+RPLGTDPV+GK+DP LEREAK AYQ L P V+
Sbjct: 21 ARIEYSEKYQDDKYEYRHVILPKELAKNLPKARLLSEQEWRGIGVQQSRGWAHYAIHRPEPHILLFRRPLGTDPVTGKIDPALEREAKDAYQNNLELNQAPMPDVS 126
BLAST of mRNA_S-dermatodea_contig852.16691.1 vs. uniprot
Match: A0A7S2BWV6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWV6_9STRA) HSP 1 Score: 169 bits (427), Expect = 8.490e-50 Identity = 78/98 (79.59%), Postives = 87/98 (88.78%), Query Frame = 3
Query: 93 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTESEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEREAKKAYQLELA 386
MA+RIEYSEKY DD+FEYRHVILPK+LAK LPK+R+L E EWRG+GVQQSRGW HYAIHRPEPHILLF+RPLGTDPV+GKVD LER+AK AY LA
Sbjct: 20 MASRIEYSEKYTDDAFEYRHVILPKELAKNLPKARLLGEQEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVDVELERDAKDAYNASLA 117
BLAST of mRNA_S-dermatodea_contig852.16691.1 vs. uniprot
Match: W7T145_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T145_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.560e-48 Identity = 75/99 (75.76%), Postives = 87/99 (87.88%), Query Frame = 3
Query: 93 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTESEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEREAKKAYQLELAG 389
MA+RIEYSEKY DD+ EYRHVILPK++A+ LPK R+LTESEWRG+GVQQSRGW HYAIHRPEPHILLF+RPLGTDPV+GKV+ LEREAK+ Y + G
Sbjct: 1 MASRIEYSEKYMDDNHEYRHVILPKEIARSLPKQRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVNAELEREAKEKYAESMNG 99
BLAST of mRNA_S-dermatodea_contig852.16691.1 vs. uniprot
Match: A0A6S9ANL1_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9ANL1_9STRA) HSP 1 Score: 163 bits (413), Expect = 6.280e-48 Identity = 75/93 (80.65%), Postives = 86/93 (92.47%), Query Frame = 3
Query: 96 AARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTESEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEREAKKAYQ 374
A+RIEYSEKY D + EYRHVILPKDLAK LPK+R+L+ESEWRG+GVQQSRGWMHYAIHRPEPHILLF+RPLGTDP SG+VDP LEREA++ Y+
Sbjct: 4 ASRIEYSEKYADTANEYRHVILPKDLAKTLPKNRLLSESEWRGIGVQQSRGWMHYAIHRPEPHILLFRRPLGTDPQSGQVDPELEREAREEYK 96
BLAST of mRNA_S-dermatodea_contig852.16691.1 vs. uniprot
Match: A0A7S3MEH0_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEH0_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.010e-46 Identity = 73/95 (76.84%), Postives = 83/95 (87.37%), Query Frame = 3
Query: 102 RIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTESEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEREAKKAYQLELA 386
+IEYSEKYQD +EYRHVILPKD A+ LPK+R LTE EWR +GVQQSRGW HYA H+PEPHILLF+RPLGTDPVSG+VDP LEREA++ YQ ELA
Sbjct: 5 QIEYSEKYQDGKYEYRHVILPKDSARNLPKNRTLTELEWRNIGVQQSRGWEHYACHKPEPHILLFRRPLGTDPVSGEVDPELEREAREKYQQELA 99
BLAST of mRNA_S-dermatodea_contig852.16691.1 vs. uniprot
Match: A0A1E7F3Q6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3Q6_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.010e-46 Identity = 73/95 (76.84%), Postives = 86/95 (90.53%), Query Frame = 3
Query: 96 AARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTESEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEREAKKAYQLE 380
A+RIEYSEKY DD EYRHVILPK+LAK LPKSR+L+ESEWRG+GVQQSRGW HYAIHRPEPHILLF+RPLGTDP SG+VDP +ER+A++ Y+ +
Sbjct: 5 ASRIEYSEKYADDMNEYRHVILPKELAKTLPKSRLLSESEWRGIGVQQSRGWGHYAIHRPEPHILLFRRPLGTDPQSGRVDPEMERKAREEYRAQ 99
BLAST of mRNA_S-dermatodea_contig852.16691.1 vs. uniprot
Match: A0A7S0UH58_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UH58_9STRA) HSP 1 Score: 160 bits (405), Expect = 2.430e-46 Identity = 74/99 (74.75%), Postives = 86/99 (86.87%), Query Frame = 3
Query: 96 AARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTESEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEREAKKAYQLELAGK 392
A+RIEYSEKY DD EYRHVILPK+LAK LPKSR+L+ESEWRG+GVQQSRGW HYAIHRPEPHILLF+RPLGTDP SG+VDP +ER+A+ Y+ + K
Sbjct: 34 ASRIEYSEKYADDLNEYRHVILPKELAKTLPKSRLLSESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPEMERKARDEYRSQYQRK 132
BLAST of mRNA_S-dermatodea_contig852.16691.1 vs. uniprot
Match: A0A7S1CQT6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQT6_9STRA) HSP 1 Score: 158 bits (399), Expect = 1.220e-45 Identity = 70/93 (75.27%), Postives = 80/93 (86.02%), Query Frame = 3
Query: 93 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTESEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEREAKKAY 371
+A RIEYSEKYQDD FEYRHVILPK+LAK LPK R+L E EWRG+GVQQSRGW+HYA HRPEPH+LLF+RPLGTDP +GK+D L REA+ Y
Sbjct: 5 IAKRIEYSEKYQDDKFEYRHVILPKELAKSLPKERLLLEPEWRGIGVQQSRGWVHYACHRPEPHVLLFRRPLGTDPTTGKIDKVLAREARDQY 97
BLAST of mRNA_S-dermatodea_contig852.16691.1 vs. uniprot
Match: A0A7S0GBZ4_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GBZ4_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.380e-45 Identity = 76/109 (69.72%), Postives = 90/109 (82.57%), Query Frame = 3
Query: 48 YCVYERSFRGNDTPAMAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTESEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPTLEREAKKAYQ 374
Y Y SF+ + + A+RIEYSEKY DD EYRHVILPK++AK LPKSR+LTESEWRG+GVQQSRGW HYAIHRPEPHILLF+R LGTDP SG+V P LER+A++ Y+
Sbjct: 19 YVAYLTSFKMSSS---ASRIEYSEKYADDVNEYRHVILPKEIAKTLPKSRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRALGTDPQSGRVVPELERQAREEYK 124 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig852.16691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig852.16691.1 >prot_S-dermatodea_contig852.16691.1 ID=prot_S-dermatodea_contig852.16691.1|Name=mRNA_S-dermatodea_contig852.16691.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=174bp PQSKTKQLPSRRANYCTACTNGVFGVTTHQPWPPASSIRRSTKTTASNTGback to top mRNA from alignment at S-dermatodea_contig852:11317..14425+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig852.16691.1 ID=mRNA_S-dermatodea_contig852.16691.1|Name=mRNA_S-dermatodea_contig852.16691.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3109bp|location=Sequence derived from alignment at S-dermatodea_contig852:11317..14425+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig852:11317..14425+ >mRNA_S-dermatodea_contig852.16691.1 ID=mRNA_S-dermatodea_contig852.16691.1|Name=mRNA_S-dermatodea_contig852.16691.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1044bp|location=Sequence derived from alignment at S-dermatodea_contig852:11317..14425+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |