mRNA_S-dermatodea_contig8478.16647.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8478.16647.1
Unique NamemRNA_S-dermatodea_contig8478.16647.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig8478.16647.1 vs. uniprot
Match: D8LLS2_ECTSI (Fructose-bisphosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLS2_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 3.370e-27
Identity = 52/60 (86.67%), Postives = 56/60 (93.33%), Query Frame = 1 
Query:    4 GKLRLLYEAAPMAFICEQAGGVATTGEQRVMDINPEKVHQRVPTYLGSVDDVNELLSALK 183
            GKLRLLYE APMAFICEQAGG+ATTG QRVMDINPEKVHQRVPTYLGS +DV EL++ALK
Sbjct:  342 GKLRLLYEGAPMAFICEQAGGMATTGTQRVMDINPEKVHQRVPTYLGSAEDVTELINALK 401
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BLAST of mRNA_S-dermatodea_contig8478.16647.1 vs. uniprot
Match: A0A835YUK2_9STRA (Fructose-bisphosphatase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUK2_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.650e-21
Identity = 44/60 (73.33%), Postives = 54/60 (90.00%), Query Frame = 1 
Query:    4 GKLRLLYEAAPMAFICEQAGGVATTGEQRVMDINPEKVHQRVPTYLGSVDDVNELLSALK 183
            GKLRLLYEAAPM+FI EQAGG +TTG++R+M+I+PE+VHQRVPT+LGS DDV EL  +LK
Sbjct:  341 GKLRLLYEAAPMSFIVEQAGGKSTTGKERIMNIHPEQVHQRVPTFLGSADDVTELEKSLK 400
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BLAST of mRNA_S-dermatodea_contig8478.16647.1 vs. uniprot
Match: A0A8J2SR33_9STRA (Fructose-bisphosphatase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SR33_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.110e-20
Identity = 45/56 (80.36%), Postives = 47/56 (83.93%), Query Frame = 1 
Query:    4 GKLRLLYEAAPMAFICEQAGGVATTGEQRVMDINPEKVHQRVPTYLGSVDDVNELL 171
            GKLRLLYEAAPMAF+ EQAGG ATTG  R+MDI P  VHQRVP  LGSVDDVNELL
Sbjct:  377 GKLRLLYEAAPMAFLVEQAGGAATTGRGRIMDIEPTNVHQRVPCMLGSVDDVNELL 432
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BLAST of mRNA_S-dermatodea_contig8478.16647.1 vs. uniprot
Match: S4RMN8_PETMA (Fructose-bisphosphatase n=3 Tax=Petromyzon marinus TaxID=7757 RepID=S4RMN8_PETMA)

HSP 1 Score: 89.0 bits (219), Expect = 1.170e-20
Identity = 40/60 (66.67%), Postives = 48/60 (80.00%), Query Frame = 1 
Query:    4 GKLRLLYEAAPMAFICEQAGGVATTGEQRVMDINPEKVHQRVPTYLGSVDDVNELLSALK 183
            GKLRLLYE  PMAF+ EQAGG+ATTG QR++D+ PE +HQRVP  +GS DDVNE L  +K
Sbjct:  127 GKLRLLYECNPMAFVIEQAGGIATTGTQRILDVQPETIHQRVPFVVGSPDDVNEYLEIVK 186
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BLAST of mRNA_S-dermatodea_contig8478.16647.1 vs. uniprot
Match: A8PSY0_MALGO (Fructose-bisphosphatase n=1 Tax=Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) TaxID=425265 RepID=A8PSY0_MALGO)

HSP 1 Score: 90.5 bits (223), Expect = 3.510e-20
Identity = 41/57 (71.93%), Postives = 49/57 (85.96%), Query Frame = 1 
Query:    4 GKLRLLYEAAPMAFICEQAGGVATTGEQRVMDINPEKVHQRVPTYLGSVDDVNELLS 174
            GKLRLLYE  PMAF+ EQAGGVATTGE+RV+D+ P K+H+RVP +LGS DDV +LLS
Sbjct:  280 GKLRLLYEGFPMAFLIEQAGGVATTGEKRVLDVEPTKIHERVPVFLGSKDDVQDLLS 336
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BLAST of mRNA_S-dermatodea_contig8478.16647.1 vs. uniprot
Match: UPI00117CD2F9 (fructose-1,6-bisphosphatase isozyme 2-like n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=UPI00117CD2F9)

HSP 1 Score: 85.5 bits (210), Expect = 8.050e-20
Identity = 40/57 (70.18%), Postives = 47/57 (82.46%), Query Frame = 1 
Query:    4 GKLRLLYEAAPMAFICEQAGGVATTGEQRVMDINPEKVHQRVPTYLGSVDDVNELLS 174
            GKLRLLYE  P+AF+ EQAGG+ATTG QRV+D+ PE +HQRVP  +GS DDVNE LS
Sbjct:   80 GKLRLLYECNPIAFLIEQAGGMATTGTQRVLDVQPEALHQRVPFVVGSPDDVNEYLS 136
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BLAST of mRNA_S-dermatodea_contig8478.16647.1 vs. uniprot
Match: A0A1A8LJP2_9TELE (Fructose-1,6-bisphosphatase 2 (Fragment) n=1 Tax=Nothobranchius pienaari TaxID=704102 RepID=A0A1A8LJP2_9TELE)

HSP 1 Score: 84.7 bits (208), Expect = 9.140e-20
Identity = 40/59 (67.80%), Postives = 48/59 (81.36%), Query Frame = 1 
Query:    7 KLRLLYEAAPMAFICEQAGGVATTGEQRVMDINPEKVHQRVPTYLGSVDDVNELLSALK 183
            KLRLLYE  P+AF+ EQAGG+ATTG QRV+D+ PE +HQRVP  +GS DDVNE LS +K
Sbjct:   59 KLRLLYECNPIAFLIEQAGGLATTGTQRVLDVQPEALHQRVPFVVGSPDDVNEYLSFVK 117
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BLAST of mRNA_S-dermatodea_contig8478.16647.1 vs. uniprot
Match: UPI0019397852 (fructose-1,6-bisphosphatase 1-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI0019397852)

HSP 1 Score: 89.4 bits (220), Expect = 9.770e-20
Identity = 41/60 (68.33%), Postives = 49/60 (81.67%), Query Frame = 1 
Query:    4 GKLRLLYEAAPMAFICEQAGGVATTGEQRVMDINPEKVHQRVPTYLGSVDDVNELLSALK 183
            GKLRLLYEA PMA++ E+AGG ATTG QR+MDI PE +HQRVP +LGS DDV+E L  +K
Sbjct:  274 GKLRLLYEAGPMAYVLERAGGKATTGHQRIMDIVPENIHQRVPVFLGSPDDVDEYLEIVK 333
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BLAST of mRNA_S-dermatodea_contig8478.16647.1 vs. uniprot
Match: A0A2N1JF18_9BASI (Fructose-bisphosphatase n=1 Tax=Malassezia vespertilionis TaxID=2020962 RepID=A0A2N1JF18_9BASI)

HSP 1 Score: 89.0 bits (219), Expect = 1.330e-19
Identity = 40/60 (66.67%), Postives = 50/60 (83.33%), Query Frame = 1 
Query:    4 GKLRLLYEAAPMAFICEQAGGVATTGEQRVMDINPEKVHQRVPTYLGSVDDVNELLSALK 183
            GKLRLLYEA PMAF+ EQAGG+ATTGE+RV+D+ P  +H+R P +LGS DDV++LLS  K
Sbjct:  281 GKLRLLYEAFPMAFLTEQAGGIATTGEKRVLDVQPTSIHERCPIFLGSKDDVSDLLSFFK 340
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BLAST of mRNA_S-dermatodea_contig8478.16647.1 vs. uniprot
Match: A0A4D9CTB7_9STRA (Fructose-bisphosphatase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTB7_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.590e-19
Identity = 41/60 (68.33%), Postives = 51/60 (85.00%), Query Frame = 1 
Query:    4 GKLRLLYEAAPMAFICEQAGGVATTGEQRVMDINPEKVHQRVPTYLGSVDDVNELLSALK 183
            GKLRLLYEAAPM FI EQAGG ATTG + + D+ P+ VHQRVPT+LGS +DV+EL+++LK
Sbjct:  267 GKLRLLYEAAPMGFIMEQAGGRATTGSEAIHDLQPKSVHQRVPTFLGSPEDVDELVASLK 326
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8478.16647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLS2_ECTSI3.370e-2786.67Fructose-bisphosphatase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUK2_9STRA1.650e-2173.33Fructose-bisphosphatase n=2 Tax=Tribonema minus Ta... [more]
A0A8J2SR33_9STRA1.110e-2080.36Fructose-bisphosphatase n=1 Tax=Pelagomonas calceo... [more]
S4RMN8_PETMA1.170e-2066.67Fructose-bisphosphatase n=3 Tax=Petromyzon marinus... [more]
A8PSY0_MALGO3.510e-2071.93Fructose-bisphosphatase n=1 Tax=Malassezia globosa... [more]
UPI00117CD2F98.050e-2070.18fructose-1,6-bisphosphatase isozyme 2-like n=1 Tax... [more]
A0A1A8LJP2_9TELE9.140e-2067.80Fructose-1,6-bisphosphatase 2 (Fragment) n=1 Tax=N... [more]
UPI00193978529.770e-2068.33fructose-1,6-bisphosphatase 1-like n=1 Tax=Styela ... [more]
A0A2N1JF18_9BASI1.330e-1966.67Fructose-bisphosphatase n=1 Tax=Malassezia vespert... [more]
A0A4D9CTB7_9STRA1.590e-1968.33Fructose-bisphosphatase n=1 Tax=Nannochloropsis sa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8478contigS-dermatodea_contig8478:6235..6855 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score109.8
Seed ortholog evalue4.7e-22
Seed eggNOG ortholog2880.D8LLS2
Preferred nameFBP
KEGG rclassRC00017
KEGG koko:K03841
KEGG ReactionR00762,R04780
KEGG Pathwayko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko04152,ko04910,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map04152,map04910
KEGG ModuleM00003,M00165,M00167,M00344
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006091,GO:0006094,GO:0006793,GO:0006796,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009266,GO:0009311,GO:0009312,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009719,GO:0009725,GO:0009735,GO:0009767,GO:0009773,GO:0009987,GO:0010033,GO:0010319,GO:0015979,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0019684,GO:0022900,GO:0030388,GO:0031967,GO:0031975,GO:0034637,GO:0042132,GO:0042221,GO:0042578,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046351,GO:0046364,GO:0048046,GO:0050308,GO:0050896,GO:0055114,GO:0071704,GO:1901135,GO:1901576
EggNOG free text desc.fructose 1,6-bisphosphate 1-phosphatase activity
EggNOG OGsCOG0158@1,KOG1458@2759
EC3.1.3.11
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Exons2
Model size186
Cds size186
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925345.9478507-CDS-S-dermatodea_contig8478:6234..62911622925345.9478507-CDS-S-dermatodea_contig8478:6234..6291Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8478 6235..6291 +
1694079871.0105696-CDS-S-dermatodea_contig8478:6234..62911694079871.0105696-CDS-S-dermatodea_contig8478:6234..6291Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8478 6235..6291 +
1622925345.9611928-CDS-S-dermatodea_contig8478:6726..68551622925345.9611928-CDS-S-dermatodea_contig8478:6726..6855Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8478 6727..6855 +
1694079871.0264113-CDS-S-dermatodea_contig8478:6726..68551694079871.0264113-CDS-S-dermatodea_contig8478:6726..6855Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8478 6727..6855 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8478.16647.1prot_S-dermatodea_contig8478.16647.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8478 6235..6855 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8478.16647.1

>prot_S-dermatodea_contig8478.16647.1 ID=prot_S-dermatodea_contig8478.16647.1|Name=mRNA_S-dermatodea_contig8478.16647.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=62bp
AGKLRLLYEAAPMAFICEQAGGVATTGEQRVMDINPEKVHQRVPTYLGSV
DDVNELLSALK*
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mRNA from alignment at S-dermatodea_contig8478:6235..6855+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8478.16647.1 ID=mRNA_S-dermatodea_contig8478.16647.1|Name=mRNA_S-dermatodea_contig8478.16647.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=621bp|location=Sequence derived from alignment at S-dermatodea_contig8478:6235..6855+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCAGGCAAGCTGAGGCTCCTGTACGAGGCCGCCCCGATGGCCTTCATCTG
CGAGCAGGTAAAGGAGAGTTTGTGTGTGCTTTTTTTCTTTTGGGCTTGTA
GTAGTATTAGTGGCGAACGTCGCCAGCGATATATGACATTGAACTGCAGC
TTGCATGGGGACCGCGGCGAGCCTTGCATATCCGCGTGGAACCTTGGGAA
ATTTTCGTATTGACCCAATCTATGATAACACACATTCTGTAAACACAGTG
AGTGTTGGATAATTTTGGTTGTATTATTATTAGCATTTTTGTAAGCTACG
CATGCATGTCTTGAGATTTTTTGTCAAATGTAGAGAAAGCTCTTGCGTTT
TTCATTGTTGCACGCACGGCGGCCCTACCGCGCCAATAGTAAACGTGCTT
TTCGTTTGCTGACCAATCACCACACCCACCCCACCCCGCCCATCCACCGA
CGGCTTCGAAAAAAAAAACGTGACTGCGAACCGAACGCGAAGGCGGGCGG
CGTGGCCACGACGGGCGAGCAGCGCGTGATGGACATCAACCCGGAGAAGG
TTCACCAGCGCGTGCCCACCTACCTCGGGTCCGTCGACGACGTTAACGAG
CTCCTCAGCGCCTTGAAGTAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig8478:6235..6855+

>mRNA_S-dermatodea_contig8478.16647.1 ID=mRNA_S-dermatodea_contig8478.16647.1|Name=mRNA_S-dermatodea_contig8478.16647.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=372bp|location=Sequence derived from alignment at S-dermatodea_contig8478:6235..6855+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GCAGGCAAGCTGAGGCTCCTGTACGAGGCCGCCCCGATGGCCTTCATCTG
CGAGCAGGCAGGCAAGCTGAGGCTCCTGTACGAGGCCGCCCCGATGGCCT
TCATCTGCGAGCAGGCGGGCGGCGTGGCCACGACGGGCGAGCAGCGCGTG
ATGGACATCAACCCGGAGAAGGTTCACCAGCGCGTGCCCACCTACCTCGG
GTCCGTCGACGACGTTAACGAGCTCCTCAGCGCCTTGAAGTAGGCGGGCG
GCGTGGCCACGACGGGCGAGCAGCGCGTGATGGACATCAACCCGGAGAAG
GTTCACCAGCGCGTGCCCACCTACCTCGGGTCCGTCGACGACGTTAACGA
GCTCCTCAGCGCCTTGAAGTAG
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