mRNA_S-dermatodea_contig8449.16620.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8449.16620.1 vs. uniprot
Match: D7G648_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G648_ECTSI) HSP 1 Score: 280 bits (715), Expect = 1.410e-88 Identity = 139/201 (69.15%), Postives = 162/201 (80.60%), Query Frame = 1
Query: 1 QGPDGVVRKLKDRVRALCKERRIRLQEFFTPFDVHHTKKISNVNFRRALDQAGLMAPERGAPPSDLLSLKEAEMLCKRYEVKGRGKGDAVE---VNYWKMCEQIEKVFARRGLEKTPTLDVKLSLHDRPASRYGTRCPELSEDEVDAVAGLLAQIRLLSTTEGLVVKALFETFDKRHTGKVTPAIFVRQLDSMFKGKLSKE 594
+G DG+VR LKD++R LCK+RRIRLQEFF P+DVHH KK+S FRRALDQAGL AP RGAPPSDLL+++E E+L KRYEVKG + A+ VNYWK+CEQ+EKVF RRGLEK PTLDVKLSL DRP S YG P LS E D VA LL ++RL S TEGL+VK+LFETFDKRH+G+VT IF+RQLDSMFKG+LSKE
Sbjct: 18 KGHDGMVRPLKDKLRTLCKQRRIRLQEFFKPYDVHHNKKVSKGQFRRALDQAGLTAPARGAPPSDLLTVQEVEVLVKRYEVKGDARAGAIGEGVVNYWKLCEQVEKVFTRRGLEKNPTLDVKLSLEDRPGSGYGVHRPGLSTQEADQVATLLGRVRLFSATEGLIVKSLFETFDKRHSGRVTSPIFLRQLDSMFKGRLSKE 218
BLAST of mRNA_S-dermatodea_contig8449.16620.1 vs. uniprot
Match: D7G649_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G649_ECTSI) HSP 1 Score: 140 bits (354), Expect = 7.220e-32 Identity = 90/166 (54.22%), Postives = 105/166 (63.25%), Query Frame = 1
Query: 823 MSPACXXQSPGRSTEEKED-DDSSSIFSSVTGFPGRGAVGFSVGE----GGPFEGGDGLLDGVSGCGPGRSEARRASGGRARVLAGSGDSMQIERQMASKVAYHRLEPEDAYTPYDPNRSGTVTAAVFRRGLSDAFRMPFSEAQLDALAERYRCGNNQASSVSFRR 1305
++P+ S G + ED DD SSI SSVTGFP RGAVGF VGE G P G G+ +GCG G AR + G DS+ IER+MASKV YHRL PEDAY PYDP RSG+VT +VFRRGLSDAFR+PFS+ QLD L RYR G N+ + RR
Sbjct: 9 VAPSMCEISQGSVEADAEDFDDGSSINSSVTGFPTRGAVGFMVGEEQGSGSPVSG-RGI---AAGCGVGWRRARGRTDGTGTAPPPK-DSLPIERKMASKVVYHRLIPEDAYAPYDPTRSGSVTESVFRRGLSDAFRLPFSDDQLDTLTRRYRHGENKIRATLRRR 169
BLAST of mRNA_S-dermatodea_contig8449.16620.1 vs. uniprot
Match: K3W5D1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W5D1_GLOUD) HSP 1 Score: 119 bits (297), Expect = 1.280e-24 Identity = 89/237 (37.55%), Postives = 129/237 (54.43%), Query Frame = 1
Query: 22 RKLKDRVRALCKERRIRLQEFFTPFDVHHTKKISNVNFRRALDQAGLMAPERGAPPSDLLSLKEAEMLCKRYEVKGRGKGDAVEVNYWKMCEQIEKVFARRGLEKTPTLDVKLSLHDRPASRYGTRCPELSEDEVDAVAGLLAQIRLLSTTEGLVVKALFETFDKRHTGKVTPAIFVRQL-DSMFKGKLSKENKSLLVKAYHTRDGAVSYRAMQAD-CDDATVAQAPPAAVPPASPN 726
R LK ++R LCK+RRIRL+EF FDVHH KKI F+RALD +GL LS E +L +Y R + + V+Y + C+ I+KVF +GLE P L ++ ++G LSE+E++ + + A++ T +G+V+K +F FD+ + GKVT FVR L D ++ L+KE +L+KAY + V YRA+ D C A A AA P SP+
Sbjct: 8 RSLKAKIRVLCKQRRIRLEEFMKTFDVHHVKKIKAEQFKRALDVSGLH-----------LSPTEVNLLLAKY----RFPDEPLFVDYRRFCDLIDKVFTVKGLEGNPELKTRIQNEMPSLKKFGA--VSLSENELELLKLVKAKLFAAVTNKGIVLKDVFHDFDRSNAGKVTKPQFVRDLLDIVY---LTKEEMDVLLKAYGD-ELDVHYRALHFDICPGAAGAGTTVAA--PRSPD 221
BLAST of mRNA_S-dermatodea_contig8449.16620.1 vs. uniprot
Match: A0A8K1CS62_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS62_PYTOL) HSP 1 Score: 110 bits (275), Expect = 7.400e-22 Identity = 78/216 (36.11%), Postives = 117/216 (54.17%), Query Frame = 1
Query: 22 RKLKDRVRALCKERRIRLQEFFTPFDVHHTKKISNVNFRRALDQAGLMAPERGAPPSDLLSLKEAEMLCKRYEVKGRGKGDAVEVNYWKMCEQIEKVFARRGLEKTPTLDVKLSLHDR-PASRYGTRCPELSEDEVDAVAGLLAQIRLLSTTEGLVVKALFETFDKRHTGKVTPAIFVRQLDSMFKGKLSKENKSLLVKAYHTRDGAVSYRAMQAD 666
R LK ++R LCK+RRIRL+EF FD+HH KKI F+RALD +GL L+ +E ++ +Y +K + + V+Y + C+ I+K F +GLE P D+ LS+H+ PA + P LS+ E + A++ +G+V+K +F FD+ + GKVT + FVR L + LS LVKAY + V+YR + D
Sbjct: 8 RSLKAKIRVLCKQRRIRLEEFMKTFDIHHVKKIKVEQFKRALDVSGLQ-----------LTSEEMNLIVAKYRLKD----EPLFVDYRRFCDLIDKAFTVKGLEGKP--DLCLSIHNELPAQKKFAIVP-LSDMEEQVLTQAKAKLATAVRNKGIVLKDVFHGFDRSNAGKVTKSQFVRDLLDIV--VLSSAEVEALVKAYGN-ELDVNYRVLHYD 202
BLAST of mRNA_S-dermatodea_contig8449.16620.1 vs. uniprot
Match: A0A5D6XFG6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFG6_9STRA) HSP 1 Score: 106 bits (264), Expect = 2.170e-20 Identity = 87/234 (37.18%), Postives = 120/234 (51.28%), Query Frame = 1
Query: 37 RVRALCKERRIRLQEFFTPFDVHHTKKISNVNFRRALDQAGLMAPERGAPPSDLLSLKEAEMLCKRYEVKGRGKGDAVEVNYWKMCEQIEKVFARRGLEKTPTLDVKLSLHDRPASR---YGTRCPELSEDEVDAVAGLLAQIRLLSTTEGLVVKALFETFDKRHTGKVTPAIFVRQ-LDSMFKGKLSKENKSLLVKAYHTRDGAVSYRAMQAD-CDDATVAQAPPAAVPPASP 723
++R LCK+RR+RL+EF FDVH KKI F RALD GL LS E ++L +Y + D V+Y + C+ I+KVF +GLE P L K RP + +G LSE E +A + A++ T+G+V+K +F FD+ + GKVT FVR LD +F L+++ +L+ AY V YRA+ D C A A A AA P SP
Sbjct: 594 KIRVLCKQRRLRLEEFMKTFDVHRVKKIRAEQFTRALDGTGLC-----------LSGDEVQLLLAKYRLPA----DPAFVDYRRFCDLIDKVFTVKGLEGRPELHAK----QRPVAAPPVFGPGPTALSERERALLAAVKAKLLAAVMTKGVVLKDVFRDFDRSNAGKVTRPQFVRDVLDILF---LAQDELDVLLAAYGDALD-VHYRALHYDICPGAAGAGAVAAA--PQSP 802
BLAST of mRNA_S-dermatodea_contig8449.16620.1 vs. uniprot
Match: D0NDK7_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NDK7_PHYIT) HSP 1 Score: 105 bits (261), Expect = 4.120e-20 Identity = 83/237 (35.02%), Postives = 119/237 (50.21%), Query Frame = 1
Query: 22 RKLKDRVRALCKERRIRLQEFFTPFDVHHTKKISNVNFRRALDQAGLMAPERGAPPSDLLSLKEAEMLCKRYEVKGRGKGDAVEVNYWKMCEQIEKVFARRGLEKTPTLDVKLSLHDRPASRYGTRCPELSEDEVDAVAGLLAQIRLLSTT--EGLVVKALFETFDKRHTGKVTPAIFVRQLDSMFKGKLSKENKSLLVKAYHTRDGAVSYRAMQAD-CDDATVAQAPPAAVPPASP 723
R LK ++R LCK+RRIRL+EF FD H KKI F+RALD +GL LS E +L +Y + D V+Y + C+ ++KVF +GLE T V +S P + +ED+ AV + +LL+ +G+V+K +F FD+ + GKVT FVR + + LS + +L+KAY + V YRA+ D C A+ A A P SP
Sbjct: 8 RSLKAKIRVLCKQRRIRLEEFMKTFDTHRVKKIRTEQFKRALDVSGLH-----------LSTTEMNLLLAKYRIAE----DPSFVDYGRFCDLMDKVFTVKGLEAKRTWQVGVSTDFEPLKTFAFETLTPAEDKTLAVV----KQKLLAAVMHKGIVLKDVFHDFDRSNAGKVTRPQFVRDISDIV--VLSSDEMDVLLKAYGDKLD-VHYRALHFDICPGASGAGT--KAAQPRSP 220
BLAST of mRNA_S-dermatodea_contig8449.16620.1 vs. uniprot
Match: A0A6A3MKF8_9STRA (EF-hand domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MKF8_9STRA) HSP 1 Score: 105 bits (261), Expect = 4.170e-20 Identity = 79/239 (33.05%), Postives = 119/239 (49.79%), Query Frame = 1
Query: 22 RKLKDRVRALCKERRIRLQEFFTPFDVHHTKKISNVNFRRALDQAGLMAPERGAPPSDLLSLKEAEMLCKRYEVKGRGKGDAVEVNYWKMCEQIEKVFARRGLEKTPTLDVKLSLHDRPASRYGTRCPELSEDEVDAVAGLLAQIRLLST-TEGLVVKALFETFDKRHTGKVTPAIFVRQLDSMFKGKLSKENKSLLVKAYHTRDGAVSYRAMQADCDDATVAQAPPAAVPPASPNDHR 735
R LK ++R LCK+RRIRL+EF FDVH KKI F+RALD +GL LS E ++ +Y + D V+Y + C+ ++KVF +GLE P + S+H P +++ P DE A+ ++ Q + +G+V+K +F FD+ + GKVT FVR + + LS + +L+KAY + V YRA+ D A+P + HR
Sbjct: 8 RSLKAKIRVLCKQRRIRLEEFMKTFDVHRVKKIKTEQFKRALDVSGLH-----------LSTTEVNLIVVKYRLPD----DPSFVDYRRFCDLMDKVFTVKGLEAKPAH--QSSIHSVPEAKFFAFEPLTPSDE--ALLRVVKQKLFAAVMNKGIVLKDVFHDFDRSNAGKVTRPQFVRDISDI--AVLSSDEMDVLLKAYSDKLD-VHYRALHFDICPGAAGAGTKVAMPRSPERRHR 224
BLAST of mRNA_S-dermatodea_contig8449.16620.1 vs. uniprot
Match: H3GTZ7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTZ7_PHYRM) HSP 1 Score: 103 bits (257), Expect = 1.310e-19 Identity = 79/231 (34.20%), Postives = 114/231 (49.35%), Query Frame = 1
Query: 22 RKLKDRVRALCKERRIRLQEFFTPFDVHHTKKISNVNFRRALDQAGLMAPERGAPPSDLLSLKEAEMLCKRYEVKGRGKGDAVEVNYWKMCEQIEKVFARRGLEKTPTLDVKLSLHDRPASRYGTRCPELSEDEVDAVAGLLAQIRLLST-TEGLVVKALFETFDKRHTGKVTPAIFVRQLDSMFKGKLSKENKSLLVKAYHTRDGAVSYRAMQADCDDATVAQAPPAAVP 711
R LK ++R LCK+RRIRL+EF FD+H KKI F+RALD +GL LS E ++ +Y + D+ V+Y + C+ ++KVF +GLE PT + A+ T EL +AV + Q + +G+V+K +F FD+ + GKVT FVR + + LS E +L+KAY R V YRA+ D AA+P
Sbjct: 8 RSLKTKIRTLCKQRRIRLEEFMKTFDIHRVKKIKTEQFKRALDISGLH-----------LSSAEINLIIAKYRLAD----DSSFVDYRRFCDLMDKVFTVKGLEAKPTSHAGSYID---AAGIKTFAFELLTPAEEAVLAAVKQKLFAAVMNKGIVLKDVFHDFDRSNAGKVTKPQFVRDISDIV--VLSSEEMDVLLKAYGDRLD-VHYRALHFDICPGAAGAGVNAAMP 217
BLAST of mRNA_S-dermatodea_contig8449.16620.1 vs. uniprot
Match: A0A421EYM9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421EYM9_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.730e-19 Identity = 80/234 (34.19%), Postives = 115/234 (49.15%), Query Frame = 1
Query: 22 RKLKDRVRALCKERRIRLQEFFTPFDVHHTKKISNVNFRRALDQAGLMAPERGAPPSDLLSLKEAEMLCKRYEVKGRGKGDAVEVNYWKMCEQIEKVFARRGLEKTPTLDVKLSLHDRPASRYGTRCPELSEDEVDAVAGLLAQIR----LLSTTEGLVVKALFETFDKRHTGKVTPAIFVRQLDSMFKGKLSKENKSLLVKAYHTRDGAVSYRAMQADCDDATVAQAPPAAVP 711
R LK ++R LCK+RRIRL+EF FD+H KKI F+RALD +GL LS E +L +Y + D V+Y + C+ ++KVF +GLE PTL D PA + P +E GLL ++ +G+V+K +F FD+ + GKVT FVR + + LS + ++L+KAY + V YRA+ D AA+P
Sbjct: 8 RSLKAKIRILCKQRRIRLEEFMKTFDIHRVKKIKTEQFKRALDMSGLQ-----------LSSTEIGLLLTKYRLVD----DPAFVDYRRFCDLMDKVFTVKGLEAKPTLQSNFQ-SDFPALKTFAFEPLTGAEE-----GLLRVVKQKLFAAVMNKGIVLKDVFHDFDRSNVGKVTRPQFVRDISDIV--VLSDDEINILLKAYGDKLD-VHYRALHFDICPGASGAGTMAAMP 217
BLAST of mRNA_S-dermatodea_contig8449.16620.1 vs. uniprot
Match: A0A662YA76_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YA76_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.750e-19 Identity = 79/230 (34.35%), Postives = 112/230 (48.70%), Query Frame = 1
Query: 22 RKLKDRVRALCKERRIRLQEFFTPFDVHHTKKISNVNFRRALDQAGLMAPERGAPPSDLLSLKEAEMLCKRYEVKGRGKGDAVEVNYWKMCEQIEKVFARRGLEKTPTLDVKLSLHDRPASRYGTRCPELSEDEVDAVAGLLAQIRLLSTTEGLVVKALFETFDKRHTGKVTPAIFVRQLDSMFKGKLSKENKSLLVKAYHTRDGAVSYRAMQADCDDATVAQAPPAAVP 711
R LK ++R LCK+RRIRL+EF FD+H KKI F+RALD +GL LS E +L +Y R D V+Y + C+ I+KVF +GLE PT V+ S H + L+ E + + ++ +G+V+K +F FD+ + GKVT FVR + + LS + +LL+KAY V YRA+ D AA P
Sbjct: 8 RSLKAKIRVLCKQRRIRLEEFMKTFDIHRVKKIKAEQFKRALDVSGLH-----------LSSDEIGLLLAKY----RFANDPSFVDYRRFCDLIDKVFTVKGLEAKPT--VQTSTHSDVTAPNKFALETLTGAEEAQLESVQQKLLAAVMNKGIVLKDVFHDFDRSNAGKVTKPQFVRDMLDIV--VLSPDEMNLLLKAYGDHLD-VHYRALHYDICPGAAGAGVKAAAP 217 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8449.16620.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8449.16620.1 >prot_S-dermatodea_contig8449.16620.1 ID=prot_S-dermatodea_contig8449.16620.1|Name=mRNA_S-dermatodea_contig8449.16620.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=501bp QGPDGVVRKLKDRVRALCKERRIRLQEFFTPFDVHHTKKISNVNFRRALDback to top mRNA from alignment at S-dermatodea_contig8449:934..8206- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8449.16620.1 ID=mRNA_S-dermatodea_contig8449.16620.1|Name=mRNA_S-dermatodea_contig8449.16620.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7273bp|location=Sequence derived from alignment at S-dermatodea_contig8449:934..8206- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8449:934..8206- >mRNA_S-dermatodea_contig8449.16620.1 ID=mRNA_S-dermatodea_contig8449.16620.1|Name=mRNA_S-dermatodea_contig8449.16620.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3006bp|location=Sequence derived from alignment at S-dermatodea_contig8449:934..8206- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |