mRNA_S-dermatodea_contig83894.16561.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig83894.16561.1 vs. uniprot
Match: Q2TU97_DICDH (NADH dehydrogenase subunit 7 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TU97_DICDH) HSP 1 Score: 172 bits (435), Expect = 2.180e-50 Identity = 83/92 (90.22%), Postives = 88/92 (95.65%), Query Frame = 1
Query: 1 MVLKLKKSKKRLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYIQALPYFDRLDYVSMMSQEHTYSLAVEN 276
M+LK KK KK L+HFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIE+KTY+QALPYFDRLDYVSMM QEHTY+LAVEN
Sbjct: 1 MILKNKKQKKNLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIESKTYLQALPYFDRLDYVSMMCQEHTYALAVEN 92
BLAST of mRNA_S-dermatodea_contig83894.16561.1 vs. uniprot
Match: A0A4D6E538_9PHAE (NADH dehydrogenase subunit 7 n=2 Tax=Laminariaceae TaxID=33636 RepID=A0A4D6E538_9PHAE) HSP 1 Score: 170 bits (430), Expect = 1.210e-49 Identity = 84/92 (91.30%), Postives = 86/92 (93.48%), Query Frame = 1
Query: 1 MVLKLKKSKKRLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYIQALPYFDRLDYVSMMSQEHTYSLAVEN 276
M LK K+ K+LKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTY QALPYFDRLDYVSMM QEHTYSLAVEN
Sbjct: 1 MSLKKKEFNKKLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYFQALPYFDRLDYVSMMCQEHTYSLAVEN 92
BLAST of mRNA_S-dermatodea_contig83894.16561.1 vs. uniprot
Match: NDUS2_PYLLI (NADH-ubiquinone oxidoreductase 49 kDa subunit n=72 Tax=Phaeophyceae TaxID=2870 RepID=NDUS2_PYLLI) HSP 1 Score: 168 bits (426), Expect = 4.780e-49 Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 1
Query: 1 MVLKLKKSKKRLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYIQALPYFDRLDYVSMMSQEHTYSLAVEN 276
M LK K+ K+LKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTY QALPYFDRLDYVSMM QEHTY+L+VEN
Sbjct: 1 MALKKKEFNKKLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYFQALPYFDRLDYVSMMCQEHTYALSVEN 92
BLAST of mRNA_S-dermatodea_contig83894.16561.1 vs. uniprot
Match: A0A4Y5T7J7_9PHAE (NADH dehydrogenase subunit 7 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T7J7_9PHAE) HSP 1 Score: 167 bits (423), Expect = 1.340e-48 Identity = 81/91 (89.01%), Postives = 86/91 (94.51%), Query Frame = 1
Query: 1 MVLKLKKSKKRLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYIQALPYFDRLDYVSMMSQEHTYSLAVE 273
M+LK K+ +K L+HFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTY+QALPYFDRLDYVSMM QEHTYSL VE
Sbjct: 1 MILKQKQKQKSLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYLQALPYFDRLDYVSMMCQEHTYSLGVE 91
BLAST of mRNA_S-dermatodea_contig83894.16561.1 vs. uniprot
Match: A0A8F0K0U0_9PHAE (NADH dehydrogenase subunit 7 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K0U0_9PHAE) HSP 1 Score: 166 bits (420), Expect = 3.740e-48 Identity = 82/91 (90.11%), Postives = 86/91 (94.51%), Query Frame = 1
Query: 1 MVLKLKKSKKRLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYIQALPYFDRLDYVSMMSQEHTYSLAVE 273
M LK KK +K L+HFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYIQALPYFDRLDYVSMM QEHT++LAVE
Sbjct: 1 MPLKRKKPEKSLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYIQALPYFDRLDYVSMMCQEHTFALAVE 91
BLAST of mRNA_S-dermatodea_contig83894.16561.1 vs. uniprot
Match: A0A0U1WNP6_SARFS (NADH dehydrogenase subunit 7 n=22 Tax=Fucales TaxID=3009 RepID=A0A0U1WNP6_SARFS) HSP 1 Score: 164 bits (415), Expect = 2.070e-47 Identity = 80/91 (87.91%), Postives = 86/91 (94.51%), Query Frame = 1
Query: 1 MVLKLKKSKKRLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYIQALPYFDRLDYVSMMSQEHTYSLAVE 273
MV K K+ +K+LKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIE+KT++QALPYFDRLDYVSMM QEHTY LAVE
Sbjct: 1 MVKKKKEFEKKLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIESKTFVQALPYFDRLDYVSMMCQEHTYVLAVE 91
BLAST of mRNA_S-dermatodea_contig83894.16561.1 vs. uniprot
Match: A0A140F2Z4_9STRA (NADH dehydrogenase subunit 7 n=9 Tax=Monodopsidaceae TaxID=425072 RepID=A0A140F2Z4_9STRA) HSP 1 Score: 161 bits (408), Expect = 2.280e-46 Identity = 78/91 (85.71%), Postives = 85/91 (93.41%), Query Frame = 1
Query: 1 MVLKLKKSKKRLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYIQALPYFDRLDYVSMMSQEHTYSLAVE 273
MVLK K++K+FTINFGPQHPAAHGVLRL+LELNGE+V+RADPHIGLLHRGTEKLIE KTYIQALPYFDRLDYVSMM+QEHTYSLAVE
Sbjct: 1 MVLKKTTLSKKIKNFTINFGPQHPAAHGVLRLVLELNGEIVERADPHIGLLHRGTEKLIEYKTYIQALPYFDRLDYVSMMAQEHTYSLAVE 91
BLAST of mRNA_S-dermatodea_contig83894.16561.1 vs. uniprot
Match: A0A140F2R7_9STRA (NADH dehydrogenase subunit 7 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A140F2R7_9STRA) HSP 1 Score: 160 bits (405), Expect = 6.360e-46 Identity = 75/91 (82.42%), Postives = 85/91 (93.41%), Query Frame = 1
Query: 1 MVLKLKKSKKRLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYIQALPYFDRLDYVSMMSQEHTYSLAVE 273
MVLK K++K+FT+NFGPQHPAAHGVLR++LELNGE+++RADPHIGLLHRGTEKLIE KTYIQALPYFDRLDYVSMM+QEHTYSLAVE
Sbjct: 1 MVLKKTSLSKKIKNFTVNFGPQHPAAHGVLRMVLELNGEIIERADPHIGLLHRGTEKLIENKTYIQALPYFDRLDYVSMMAQEHTYSLAVE 91
BLAST of mRNA_S-dermatodea_contig83894.16561.1 vs. uniprot
Match: UPI001BC9B822 (hypothetical protein n=1 Tax=Candidatus Protochlamydia amoebophila TaxID=362787 RepID=UPI001BC9B822) HSP 1 Score: 154 bits (390), Expect = 8.500e-46 Identity = 75/88 (85.23%), Postives = 84/88 (95.45%), Query Frame = 1
Query: 13 LKKSKKRLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYIQALPYFDRLDYVSMMSQEHTYSLAVEN 276
LKKS R+K+FT+NFGPQHPAAHGVLRLILEL+GE++++ADPHIGLLHRGTEKLIE KTYIQALPYFDRLDYVSMMSQEH YS+AVEN
Sbjct: 10 LKKS--RIKNFTMNFGPQHPAAHGVLRLILELDGELIRKADPHIGLLHRGTEKLIEYKTYIQALPYFDRLDYVSMMSQEHAYSIAVEN 95
BLAST of mRNA_S-dermatodea_contig83894.16561.1 vs. uniprot
Match: A0A8E7MIM3_9STRA (NADH dehydrogenase subunit 7 n=1 Tax=Attheya longicornis TaxID=451786 RepID=A0A8E7MIM3_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.770e-45 Identity = 76/91 (83.52%), Postives = 84/91 (92.31%), Query Frame = 1
Query: 1 MVLKLKKSKKRLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYIQALPYFDRLDYVSMMSQEHTYSLAVE 273
M LK K K++K+FTINFGPQHPAAHGVLRL+LELNGEVV+RADPHIGLLHRGTEKLIE KTY+QALPYFDRLDYVSMM+QEHTY LA+E
Sbjct: 1 MTLKKKNLIKKIKNFTINFGPQHPAAHGVLRLVLELNGEVVERADPHIGLLHRGTEKLIEYKTYVQALPYFDRLDYVSMMAQEHTYCLAIE 91 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig83894.16561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig83894.16561.1 >prot_S-dermatodea_contig83894.16561.1 ID=prot_S-dermatodea_contig83894.16561.1|Name=mRNA_S-dermatodea_contig83894.16561.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=92bp MVLKLKKSKKRLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLback to top mRNA from alignment at S-dermatodea_contig83894:3..278- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig83894.16561.1 ID=mRNA_S-dermatodea_contig83894.16561.1|Name=mRNA_S-dermatodea_contig83894.16561.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=276bp|location=Sequence derived from alignment at S-dermatodea_contig83894:3..278- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig83894:3..278- >mRNA_S-dermatodea_contig83894.16561.1 ID=mRNA_S-dermatodea_contig83894.16561.1|Name=mRNA_S-dermatodea_contig83894.16561.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=552bp|location=Sequence derived from alignment at S-dermatodea_contig83894:3..278- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |