mRNA_S-dermatodea_contig82824.16472.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig82824.16472.1 vs. uniprot
Match: A0A6H5J951_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J951_9PHAE) HSP 1 Score: 103 bits (258), Expect = 1.610e-24 Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 1
Query: 13 QHPGPRDEGASFLAVKQTLLLSYCRDICSYAAFKGEGRVLGGGGPAGRLVALRTILEKLRPLDR 204
+ P PR EGASFLA+KQTLLLSYCR+ICSYAA K G LGGGG AGRLV LRT++EKLRP+DR
Sbjct: 156 EDPWPRHEGASFLALKQTLLLSYCREICSYAAAKARGEALGGGGAAGRLVELRTVMEKLRPMDR 219
BLAST of mRNA_S-dermatodea_contig82824.16472.1 vs. uniprot
Match: A0A8C9W9A8_SCLFO (Neuroguidin n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9W9A8_SCLFO) HSP 1 Score: 58.2 bits (139), Expect = 2.730e-8 Identity = 30/70 (42.86%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 1 IMKRQHPG--PRDEGASFLAVKQTLLLSYCRDICSYAAFKGEGRVLGGGGPAGRLVALRTILEKLRPLDR 204
++KR G P +G SFL ++ LLL Y +D+ + K EG + G RLVA+RT+LEK+RPLD+
Sbjct: 39 LIKRLQDGVHPTAKGLSFLDLRYQLLLFYLQDVTHLISLKAEGSSIKDSGALHRLVAVRTVLEKMRPLDQ 108
BLAST of mRNA_S-dermatodea_contig82824.16472.1 vs. uniprot
Match: UPI001E269338 (LOW QUALITY PROTEIN: neuroguidin-like n=1 Tax=Lemur catta TaxID=9447 RepID=UPI001E269338) HSP 1 Score: 57.8 bits (138), Expect = 3.640e-8 Identity = 33/70 (47.14%), Postives = 39/70 (55.71%), Query Frame = 1
Query: 1 IMKRQHPG--PRDEGASFLAVKQTLLLSYCRDICSYAAFKGEGRVLGGGGPAGRLVALRTILEKLRPLDR 204
+ KR G P +EG SFL VK LLL Y D+ K G L G RLV +RT+LEKLRPLD+
Sbjct: 35 LTKRVQAGAYPTEEGLSFLEVKDQLLLMYLMDLSHLILDKASGGSLKGHAAVLRLVEIRTVLEKLRPLDQ 104
BLAST of mRNA_S-dermatodea_contig82824.16472.1 vs. uniprot
Match: A0A2K5F1C8_AOTNA (Neuroguidin n=2 Tax=Eutheria TaxID=9347 RepID=A0A2K5F1C8_AOTNA) HSP 1 Score: 57.8 bits (138), Expect = 3.730e-8 Identity = 30/60 (50.00%), Postives = 36/60 (60.00%), Query Frame = 1
Query: 25 PRDEGASFLAVKQTLLLSYCRDICSYAAFKGEGRVLGGGGPAGRLVALRTILEKLRPLDR 204
P ++G SFL VK LLL Y D+ K GR L G RLV +RT+LEKLRPLD+
Sbjct: 45 PTEKGLSFLEVKDQLLLMYLMDLTHLILDKASGRSLQGHDAVLRLVEIRTVLEKLRPLDQ 104
BLAST of mRNA_S-dermatodea_contig82824.16472.1 vs. uniprot
Match: A0A8J4D6W1_9CHLO (Sas10 domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4D6W1_9CHLO) HSP 1 Score: 57.8 bits (138), Expect = 4.210e-8 Identity = 29/57 (50.88%), Postives = 35/57 (61.40%), Query Frame = 1
Query: 34 EGASFLAVKQTLLLSYCRDICSYAAFKGEGRVLGGGGPAGRLVALRTILEKLRPLDR 204
EG S+L K LLLSYC I Y K EGR + GRLV LR+ LEK+RP+D+
Sbjct: 294 EGLSYLEAKHLLLLSYCIHIVFYLLLKAEGRPVRDHPVIGRLVELRSYLEKIRPIDK 350
BLAST of mRNA_S-dermatodea_contig82824.16472.1 vs. uniprot
Match: A7SK02_NEMVE (Predicted protein (Fragment) n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SK02_NEMVE) HSP 1 Score: 54.7 bits (130), Expect = 6.980e-8 Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 1
Query: 34 EGASFLAVKQTLLLSYCRDICSYAAFKGEGRVLGGGGPAGRLVALRTILEKLRPLDR 204
+G SFL +K LLLSY ++ Y K EG+ + G RLV +RT+LEKLRP+D+
Sbjct: 12 KGISFLEIKFHLLLSYLINVVYYILIKTEGQNIEGDPVVDRLVEIRTVLEKLRPIDQ 68
BLAST of mRNA_S-dermatodea_contig82824.16472.1 vs. uniprot
Match: A0A6P8I5G4_ACTTE (neuroguidin-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I5G4_ACTTE) HSP 1 Score: 57.0 bits (136), Expect = 6.990e-8 Identity = 28/57 (49.12%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 34 EGASFLAVKQTLLLSYCRDICSYAAFKGEGRVLGGGGPAGRLVALRTILEKLRPLDR 204
+G SFL VK LLLSY +I Y K +G + G RLV +RT+LEKLRP+D+
Sbjct: 48 KGISFLEVKTQLLLSYLINIVYYMLLKSDGEKIEGDSAIDRLVEIRTVLEKLRPIDQ 104
BLAST of mRNA_S-dermatodea_contig82824.16472.1 vs. uniprot
Match: UPI001CFA6169 (neuroguidin n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFA6169) HSP 1 Score: 57.0 bits (136), Expect = 7.160e-8 Identity = 32/70 (45.71%), Postives = 41/70 (58.57%), Query Frame = 1
Query: 1 IMKRQHPG--PRDEGASFLAVKQTLLLSYCRDICSYAAFKGEGRVLGGGGPAGRLVALRTILEKLRPLDR 204
+MKR H G +G SFL VK LLLSY D+ K EG+ L RLV +RT+LEK+RP+D+
Sbjct: 41 LMKRVHEGVYATTKGISFLEVKYQLLLSYLMDLTYIILHKVEGKSLREAKAVLRLVEIRTVLEKMRPIDQ 110
BLAST of mRNA_S-dermatodea_contig82824.16472.1 vs. uniprot
Match: UPI000C8145FA (neuroguidin isoform X1 n=1 Tax=Loxodonta africana TaxID=9785 RepID=UPI000C8145FA) HSP 1 Score: 57.0 bits (136), Expect = 7.650e-8 Identity = 29/60 (48.33%), Postives = 36/60 (60.00%), Query Frame = 1
Query: 25 PRDEGASFLAVKQTLLLSYCRDICSYAAFKGEGRVLGGGGPAGRLVALRTILEKLRPLDR 204
P ++G SFL VK LLL Y D+ K G L G A RLV +RT+LEK+RPLD+
Sbjct: 45 PTEKGLSFLEVKDQLLLMYLMDLSHLILHKASGGSLQGHAAALRLVEIRTVLEKIRPLDQ 104
BLAST of mRNA_S-dermatodea_contig82824.16472.1 vs. uniprot
Match: A0A5N5KS89_PANHP (Uncharacterized protein n=2 Tax=Siluroidei TaxID=1489793 RepID=A0A5N5KS89_PANHP) HSP 1 Score: 56.6 bits (135), Expect = 9.790e-8 Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 25 PRDEGASFLAVKQTLLLSYCRDICSYAAFKGEGRVLGGGGPAGRLVALRTILEKLRPLDR 204
P +G SFL ++ LLL Y +D+ + K +G+ L G RLV +RT+LEK+RPLD+
Sbjct: 49 PTSKGLSFLDLRYHLLLFYLQDVAHLISIKADGQSLKDNGAIHRLVTIRTVLEKMRPLDQ 108 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig82824.16472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig82824.16472.1 >prot_S-dermatodea_contig82824.16472.1 ID=prot_S-dermatodea_contig82824.16472.1|Name=mRNA_S-dermatodea_contig82824.16472.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=67bp MKRQHPGPRDEGASFLAVKQTLLLSYCRDICSYAAFKGEGRVLGGGGPAGback to top mRNA from alignment at S-dermatodea_contig82824:348..551- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig82824.16472.1 ID=mRNA_S-dermatodea_contig82824.16472.1|Name=mRNA_S-dermatodea_contig82824.16472.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=204bp|location=Sequence derived from alignment at S-dermatodea_contig82824:348..551- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig82824:348..551- >mRNA_S-dermatodea_contig82824.16472.1 ID=mRNA_S-dermatodea_contig82824.16472.1|Name=mRNA_S-dermatodea_contig82824.16472.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=402bp|location=Sequence derived from alignment at S-dermatodea_contig82824:348..551- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |