mRNA_S-dermatodea_contig82089.16402.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig82089.16402.1 vs. uniprot
Match: D8LEE3_ECTSI (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE3_ECTSI) HSP 1 Score: 215 bits (547), Expect = 4.780e-63 Identity = 103/117 (88.03%), Postives = 113/117 (96.58%), Query Frame = 1
Query: 1 QGPSVEKLSPLVRSAMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPAEVLTPLVEALLMGLKDSPRVCSKACFALHNFGDQFEDSRDADSNALSQYLKALVHELLLATQREDG 351
+GP+VEKLSPLV+SAMPILIGLM+DPHVMVKDSATWTIGKICELHGPSIPA+VLTPLVEALL+ LKD+PRVCSKACFALHNFGDQFEDSRDA++NALS YL ALV ELLLATQR+DG
Sbjct: 394 EGPTVEKLSPLVQSAMPILIGLMRDPHVMVKDSATWTIGKICELHGPSIPADVLTPLVEALLLALKDTPRVCSKACFALHNFGDQFEDSRDAETNALSPYLTALVQELLLATQRDDG 510
BLAST of mRNA_S-dermatodea_contig82089.16402.1 vs. uniprot
Match: A0A7S3ZP83_9STRA (Hypothetical protein n=7 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZP83_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.980e-28 Identity = 58/116 (50.00%), Postives = 80/116 (68.97%), Query Frame = 1
Query: 4 GPSVEKLSPLVRSAMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPAEVLTPLVEALLMGLKDSPRVCSKACFALHNFGDQFEDS-RDADSNALSQYLKALVHELLLATQRED 348
GP E L+ V++AMP+L+ +KD H +VKD+A WT+G+ICELH IP L PLVE+L L+DS RV S++CFALHN FE + R ++NALS + + L+ +LL AT+R D
Sbjct: 414 GPKPELLTDPVQTAMPVLVRTLKDNHTLVKDTAAWTLGRICELHAQRIPQGYLQPLVESLGGALQDSARVASQSCFALHNLAQAFERAPRSRETNALSPFFRPLLTQLLAATERRD 529
BLAST of mRNA_S-dermatodea_contig82089.16402.1 vs. uniprot
Match: A0A3N4KUM2_9PEZI (ARM repeat-containing protein n=2 Tax=Morchella TaxID=5193 RepID=A0A3N4KUM2_9PEZI) HSP 1 Score: 115 bits (288), Expect = 1.920e-27 Identity = 56/124 (45.16%), Postives = 84/124 (67.74%), Query Frame = 1
Query: 1 QGPSVEKLSPLVRSAMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPAEVLTP-LVEALLMGLKDSPRVCSKACFALHNFGDQFEDSRDADSNALSQYLKALVHELLLATQREDGERGGRT 369
+GP ++L PLV+ A+P+L+G+M D ++MVKDSA + +G+ICE G SI ++ P L++AL GLKDSP++ S C+AL N D+F +++ N+LS+Y K V LL AT+R D + RT
Sbjct: 398 EGPEFKQLDPLVKQALPVLVGMMDDKNLMVKDSAAYALGRICECCGQSIDPQLHLPSLIQALFSGLKDSPKMASSCCWALMNLADRFGIESESEENSLSKYFKDSVSALLAATERSDADNQLRT 521
BLAST of mRNA_S-dermatodea_contig82089.16402.1 vs. uniprot
Match: D5G595_TUBMM (Importin N-terminal domain-containing protein n=5 Tax=Tuberaceae TaxID=40289 RepID=D5G595_TUBMM) HSP 1 Score: 112 bits (280), Expect = 2.300e-26 Identity = 56/124 (45.16%), Postives = 81/124 (65.32%), Query Frame = 1
Query: 1 QGPSVEKLSPLVRSAMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPAEVLTP-LVEALLMGLKDSPRVCSKACFALHNFGDQFEDSRDADSNALSQYLKALVHELLLATQREDGERGGRT 369
+GP ++ L PLV+ A+PIL+G+M D +MVKDSA + +G+IC+ G +I E+ P L++AL GLKDSP++ S C+AL N D+F + + N LS+Y K V LL AT+R D + RT
Sbjct: 398 EGPDIKLLDPLVKQALPILVGMMNDKVLMVKDSAAYALGRICDCCGTAIDPELHLPSLIQALFSGLKDSPKMASSCCWALMNLADRFGIDSEGEENPLSKYFKDSVSALLAATERPDADNQLRT 521
BLAST of mRNA_S-dermatodea_contig82089.16402.1 vs. uniprot
Match: A0A3N4LJY7_9PEZI (ARM repeat-containing protein n=1 Tax=Terfezia boudieri ATCC MYA-4762 TaxID=1051890 RepID=A0A3N4LJY7_9PEZI) HSP 1 Score: 110 bits (276), Expect = 7.950e-26 Identity = 56/124 (45.16%), Postives = 82/124 (66.13%), Query Frame = 1
Query: 1 QGPSVEKLSPLVRSAMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPAEVLTP-LVEALLMGLKDSPRVCSKACFALHNFGDQFEDSRDADSNALSQYLKALVHELLLATQREDGERGGRT 369
+GP ++ L PLV+ A+P+L+G+M+D V+VKDSA + +G+ICE GP+I A + P L+ AL GL DSP++ S C+AL N D+F AD+N LS + ++ V LL AT+R D + RT
Sbjct: 397 EGPELKLLDPLVKQALPVLVGMMEDKVVIVKDSAAYALGRICENCGPAIDATMHLPSLISALFTGLNDSPKMASSCCWALMNLADRFGLEVGADTNPLSAHFESSVRSLLQATERPDADNALRT 520
BLAST of mRNA_S-dermatodea_contig82089.16402.1 vs. uniprot
Match: A0A4S2N869_9PEZI (ARM repeat-containing protein n=1 Tax=Ascodesmis nigricans TaxID=341454 RepID=A0A4S2N869_9PEZI) HSP 1 Score: 110 bits (276), Expect = 7.960e-26 Identity = 56/119 (47.06%), Postives = 82/119 (68.91%), Query Frame = 1
Query: 4 GPSVEKLSPLVRSAMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPAEVLTP-LVEALLMGLKDSPRVCSKACFALHNFGDQFE-DSRDADSNALSQYLKALVHELLLATQREDGE 354
GP V+ L LV+ A+P+L+G+M D ++MVKDSA +T+GKICE+ G +I AE+ P L++AL GLKDSPR+ + C+AL N D+F + + + NAL++Y K V LL T+R D +
Sbjct: 399 GPDVKLLENLVQQALPVLVGMMDDKNLMVKDSAAYTLGKICEICGSAIQAEIHLPSLIQALFSGLKDSPRMANSCCWALMNLADRFGMGAGEGEENALTKYFKDSVTALLQVTERPDAD 517
BLAST of mRNA_S-dermatodea_contig82089.16402.1 vs. uniprot
Match: A0A482RYN8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RYN8_9ARCH) HSP 1 Score: 110 bits (275), Expect = 1.040e-25 Identity = 55/118 (46.61%), Postives = 75/118 (63.56%), Query Frame = 1
Query: 4 GPSVEKLSPLVRSAMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPAEVLTPLVEALLMGLKDSP-RVCSKACFALHNFGDQFEDSRDADSNALSQYLKALVHELLLATQREDGE 354
GPS EKLSPLV AMPILI +KDP V+V+D++ W IGKICELH I E+L +V L L D +V S+AC+A+HN D +A+SN LS ++ ++ +L+ T + D E
Sbjct: 213 GPSAEKLSPLVIQAMPILINCLKDPKVLVRDTSAWVIGKICELHQSCISGEMLPAMVSGLSSALDDKEGKVVSQACYAVHNLAAACADESEANSNVLSHFMPVMLQKLMGITSKSDWE 330
BLAST of mRNA_S-dermatodea_contig82089.16402.1 vs. uniprot
Match: U4KZR5_PYROM (Similar to Importin subunit beta-1 acc. no. O13864 n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4KZR5_PYROM) HSP 1 Score: 108 bits (271), Expect = 3.770e-25 Identity = 60/126 (47.62%), Postives = 83/126 (65.87%), Query Frame = 1
Query: 1 QGPSVEKLSPLVRSAMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPAEVLTP-LVEALLMGLKDSPRVCSKACFALHNFGDQF-EDSRD-ADSNALSQYLKALVHELLLATQREDGERGGRT 369
+GP ++ L PLV+ A+P+LI +M D +MVKDSA +T+GKICE G +I ++ P L++AL GLKDSPR+ S C+AL N D+F D+ D + NALS+Y K V LL T+R D + RT
Sbjct: 398 EGPELKVLDPLVKQALPVLITMMDDQVLMVKDSAAYTLGKICEQCGSAIDPQLHLPSLIQALFSGLKDSPRMASSCCWALMNLADRFGRDATDIGEENALSKYFKDSVSALLQTTERADADNQLRT 523
BLAST of mRNA_S-dermatodea_contig82089.16402.1 vs. uniprot
Match: A0A165DJG7_EXIGL (ARM repeat-containing protein n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165DJG7_EXIGL) HSP 1 Score: 108 bits (269), Expect = 6.980e-25 Identity = 56/128 (43.75%), Postives = 78/128 (60.94%), Query Frame = 1
Query: 4 GPSVEKLSPLVRSAMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPAEV-LTPLVEALLMGLKDSPRVCSKACFALHNFGDQF-----EDSRDADSNALSQYLKALVHELLLATQREDGERGGRT 369
GP L+PLV A+PILI +M+DPH+ VKD+ WT+G+IC+L +I EV L PLV AL+ GL+DSPR+ + C++L N GDQ E ++ +S Y + +V LL T+R E RT
Sbjct: 396 GPDPNSLAPLVAQALPILIDMMRDPHMQVKDTTAWTLGRICDLLTATIKPEVHLRPLVMALVAGLEDSPRIVTNCCWSLMNLGDQMSLMYTEGDAPPQTSVISPYFQGIVEALLRVTERSTNESNFRT 523
BLAST of mRNA_S-dermatodea_contig82089.16402.1 vs. uniprot
Match: A0A6U3SM86_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SM86_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.770e-24 Identity = 54/122 (44.26%), Postives = 77/122 (63.11%), Query Frame = 1
Query: 1 QGPSVEKLSPLVRSAMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPAEVLTPLVEALLMGL-KDSPRVCSKACFALHNFGDQF---EDSRDADSNALSQYLKALVHELLLATQREDGE 354
+GPS+E + P V ++P+L+ + DPHV+VKD+ W IG+ICELH +IP E LV L+ L ++PRV S+A FALHN F E + + +NALS Y+ AL+ LL T R+D +
Sbjct: 404 EGPSMEIIGPYVNQSIPVLLNALSDPHVLVKDTTAWAIGRICELHVRAIPEETFPQLVNVLMSKLLSETPRVSSQASFALHNLAAAFAGDEAAAASGTNALSAYMPALLQTLLQVTDRKDAD 525 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig82089.16402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig82089.16402.1 >prot_S-dermatodea_contig82089.16402.1 ID=prot_S-dermatodea_contig82089.16402.1|Name=mRNA_S-dermatodea_contig82089.16402.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=123bp QGPSVEKLSPLVRSAMPILIGLMKDPHVMVKDSATWTIGKICELHGPSIPback to top mRNA from alignment at S-dermatodea_contig82089:120..488+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig82089.16402.1 ID=mRNA_S-dermatodea_contig82089.16402.1|Name=mRNA_S-dermatodea_contig82089.16402.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=369bp|location=Sequence derived from alignment at S-dermatodea_contig82089:120..488+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig82089:120..488+ >mRNA_S-dermatodea_contig82089.16402.1 ID=mRNA_S-dermatodea_contig82089.16402.1|Name=mRNA_S-dermatodea_contig82089.16402.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=738bp|location=Sequence derived from alignment at S-dermatodea_contig82089:120..488+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |