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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-11_004175.1 |
| Exons | 5 |
| Model size | 2358 |
| Cds size | 2358 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8172.16370.1 >prot_S-dermatodea_contig8172.16370.1 ID=prot_S-dermatodea_contig8172.16370.1|Name=mRNA_S-dermatodea_contig8172.16370.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=786bp
MEREVRDVLNALTGCVAMRCTVEKNLEEIADIERRQRDQWERELSSSCAD PAAILPPFEVPRPRVRGRNKNTYVEPTVKDCGGDRRSTYENFSVYGVHLA VEEHIVVADSSSQTNFDQPCNSSPAGERPEEQKMTKVPSLGSAKFLFNHA LEHHKGNGPDSLISRVRGVGGVGHSANLYGNNSSSRSSGNAYKWDCKMAQ LRRSSSPFKLDVCVQQRLDSYGFGEGVCSSSLEPANANTSVDTPGGPSLR GKARAVGHNVVRRSVATIYRNPLSGGTWLDPEMSRMQDNQDSQFVSPHGL NFEAAAWPGPRKNRRWRGGTTMGMGCWRETLRVTARRRGGEPGGGEIQPQ RRRVRVRDVRGTFQRHDPSTSEGRNDPSGQSGMKGACLGRSGGGRGSGST CSHSDLHQARHHAGNGVPPRGSSARARKRVATPSLQREMLLDTQVPERAS SGFVDEGPTCAEYPNTLRYNGKREQADGGNTQRARSYPSSAGDGSEPRHA PLVVHSICLIGCKLECPSAEVFLRGQEIGNDSSLSSGVDENNRQDPSTSR QDGSKRSSAIHLVAGPQTPPTPRAADVGENRNTCGAARVWSGSDDTTAGI SGTMSGSPPPRSKSHVQSGDRSREAPQWEGSRRTEKHNSGTREPLGDRGR GMAQSVAAVRTFQFRTPGLVSTVLAVRDPPHVRRQQHQQQQQQQHSYRQK QLLTWQPSQQGRALSNEQEFTSEKEKHIMFLTRRLKQLIQLEALTIQWER LPRRERDKLDRQHKLANSRFRVTEQARQNSSIPLSI back to topmRNA from alignment at S-dermatodea_contig8172:2592..7034+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig8172.16370.1 ID=mRNA_S-dermatodea_contig8172.16370.1|Name=mRNA_S-dermatodea_contig8172.16370.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4443bp|location=Sequence derived from alignment at S-dermatodea_contig8172:2592..7034+ (Saccorhiza dermatodea SderLu1190fm monoicous) ATGGAGCGGGAAGTGCGTGACGTTTTAAACGCGCTAACTGGATGCGTTGC
CATGCGCTGCACTGTGGAGAAAAACCTCGAGGAGATCGCAGACATCGAGG
TGGGCAAGGAATCAGAATCATTCAACGTGACGACAGAAGAACTTTTGGTA
TCATGTGGTACATGTAGAGAGGCAAATATGAGATTAGGAAGGCACATGAG
GCCCCACGACGTGTGCGGGCGACGAGGGCTTCTCTGTCTTCCTTTTCTTT
CGTGCCGAACATAGTTCCTCTGGCATTCTATGCGCGACGACGACGCAAAG
ATGGCGACATCTGGTATAAGCTCCGACATGCATATACTTCGAAAGTACCA
GGTATATGATATCTTACAGTATTTTTTTTCATGGGTGGGGTTGTCAAATG
CACATGCTTCCCCCGCCTCGCTCGCCGCTGCCCCTCGAGCGCGCAGCGAT
GCATCCATACGTAAGTGGGGGTCTCTGAACCGCGAGATATATGTGTAGAT
AATGTGATAGAATAAAGGTATCTGCAGTTCGACCAGCTGCGCTCTCACTG
CTCATATTTAGATATTTCGCGACCCAAAACAAAGGAGACGCGCCATGGTA
AGAGTTGAATGTATATATTCATCTTCACAATTGCAATTTATAAAAAGAAA
CAGAAAAACCGCCGTGGACGTATGCGAGCTCAACATTTCTCTCATTCCAA
CCAAATCGAACTTACACCCTGAGAGTCGAGTCATCGAGGATGGTAAAATC
TCTACTTGATCTGCTTCGAACGTTACCTTATGCCATGGTTTCCTTCCCTT
TTGCTGGCAGAGGAGGCAGCGGGATCAATGGGAACGAGAGCTATCTTCTT
CGTGCGCCGACCCGGCGGCTATTCTTCCACCCTTTGAAGTCCCAAGGCCT
CGGGTTAGGGGGCGCAACAAAAACACGTATGTGGAACCTACCGTGAAGGA
CTGTGGTGGTGATCGTCGCAGCACCTATGAAAATTTCAGCGTATATGGAG
TGCACTTGGCAGTCGAGGAGCATATTGTGGTCGCCGATTCCAGCAGCCAG
ACGAACTTTGATCAACCGTGCAACTCGTCTCCTGCGGGTGAGAGGCCAGA
GGAGCAGAAAATGACTAAGGTTCCGTCCTTGGGAAGCGCCAAATTTCTGT
TCAATCACGCTCTCGAGCACCACAAGGGCAACGGACCAGACTCGCTGATA
TCACGGGTGCGCGGAGTAGGGGGGGTGGGCCACTCAGCAAACCTGTATGG
CAACAATAGTAGTAGTAGAAGCAGCGGCAACGCATACAAATGGGATTGTA
AGATGGCCCAACTTAGAAGATCCTCCAGCCCTTTCAAACTGGACGTTTGT
GTGCAGCAACGTTTGGACAGTTATGGCTTCGGTGAGGGTGTCTGCTCCAG
CTCTCTCGAGCCGGCAAACGCAAATACGTCGGTGGATACGCCCGGAGGCC
CTTCTTTAAGGGGTAAGGCCCGAGCTGTCGGCCATAACGTAGTCAGAAGA
TCGGTGGCGACGATCTATCGAAACCCCTTAAGCGGAGGCACCTGGCTGGA
TCCCGAGATGTCTCGCATGCAGGACAACCAAGACTCGCAATTTGTCAGCC
CCCACGGCCTTAATTTCGAAGCGGCGGCTTGGCCGGGCCCGAGAAAAAAC
AGAAGATGGCGCGGGGGAACCACCATGGGCATGGGTTGCTGGCGTGAGAC
TCTGCGCGTCACCGCTCGGAGAAGAGGAGGCGAGCCCGGCGGCGGGGAGA
TACAGCCGCAAAGGCGACGAGTGCGCGTTCGCGATGTCAGGGGCACTTTT
CAGCGGCACGATCCAAGCACGAGTGAGGGCAGGAACGATCCATCAGGGCA
ATCGGGTATGAAGGTAACACTTAAACCTACCGGAGCACGGAGTTAATACA
TGTATATATATGTATATACTTTGAAGTATGTATACAAGTATGTATATGTC
TAAAGTATACTTTGTGCATCACAGCGCACCACAGTGTCCGTAGTATGTAT
GATCACTATTATAGTTTGCTGGCACTTTGGTACTGGTCGACGCCTTTTCC
ACACTTCGTACGTTACCTCGCTCCCCCTCGTCGCTCTTCCATTCAGAACG
TTAGTTGCGGTGAACGTGCAGTACGGCGCGCAGTGGTCCCGTAAACAGAG
TGCATACGGCACTCGCGAAGATGCCGTCGTCGCCCGGACATTGCAAGAAA
GACGGGTACACTCACTAGACGGCGAGGGATCCCAGGACACCTGCATTCTC
GGACAAAACCCCGTCAATGGTCCTAAAGTTTGTGCTCACTCTGTCGTTGC
TACATATAATGATATTCTCCTGCCTGCCGACCCGTTCGTGTCAATCTTTA
CGCGTTACAGGGGGCGTGCCTGGGGCGTTCTGGAGGGGGGCGTGGGTCGG
GGTCGACGTGCAGTCATTCCGATCTTCACCAAGCAAGACATCATGCCGGT
AACGGCGTGCCCCCTCGCGGCTCGTCTGCTAGAGCAAGAAAACGAGTAGC
CACGCCCTCGTTGCAACGAGAAATGCTCCTCGACACTCAGGTTCCTGAAC
GAGCCTCGTCTGGATTCGTAGACGAAGGACCAACCTGTGCAGAATACCCC
AATACGCTGAGATACAACGGGAAGAGGGAGCAAGCTGATGGTGGAAATAC
CCAAAGAGCACGCTCCTACCCCAGCAGTGCGGGGGACGGCTCGGAACCAC
GGCACGCCCCGCTTGTTGTCCACTCAATATGTCTGATCGGCTGTAAGCTG
GAATGTCCCTCTGCGGAAGTCTTCTTGCGGGGTCAGGAAATTGGCAACGA
TTCTTCCCTATCATCTGGGGTTGACGAAAATAATCGACAAGATCCATCCA
CAAGCCGGCAGGACGGCAGTAAGAGAAGCTCCGCCATTCACCTTGTCGCT
GGGCCCCAAACACCACCAACTCCAAGGGCAGCCGATGTTGGCGAGAACAG
GAATACGTGTGGTGCTGCTCGTGTCTGGAGTGGCAGTGACGACACTACGG
CGGGGATATCGGGGACAATGTCCGGGTCTCCACCTCCTAGATCAAAGTCC
CATGTTCAAAGCGGTGACCGCTCGAGAGAAGCTCCACAATGGGAAGGGTC
GCGGCGAACGGAGAAGCATAATAGCGGTACACGTGAGCCTTTAGGAGACC
GAGGGCGAGGAATGGCGCAGTCGGTCGCGGCGGTGCGAACGTTTCAGTTT
CGCACTCCAGGACTTGTGAGCACGGTGTTGGCGGTGCGAGATCCCCCCCA
CGTCCGTCGACAGCAACATCAGCAGCAACAACAACAGCAACACTCGTATC
GACAGAAGCAGCTCCTTACGTGGCAACCGTCACAGCAGGGAAGGGCTTTG
AGCAACGAACAGGAATTTACATCAGAGTGAGCTATCACTGAGTAGGTTGA
ATCGTACAATCCAAAACCGACAATGAGCTTAGACAGGCACATCTTCTTGG
CGGGGTGTTTTCGTCGCCGTGTGTCCATGGTGGCGTCGTAGTAGTCGCTT
GTAGGAGGCGTGTGCCTTCGTGTACTTGCTTGTTGATCGTTCGTGCGTGA
TCGCGAGACATCTCCTTCACCAATAAGTAGCGCATCGACTAACTTTCTGC
CACACTTGCAAGCGTTTCTTCGTGAATCGCTCCGATCAACGGTCTTGCGC
AGGAAAGAAAAACACATCATGTTTCTGACCAGGCGCTTGAAGCAGCTGAT
ACAGCTAGAGGTGCGGGGAGGCCTTCTACGGGCCCGGGGATTTGTTTTGT
TTTGGAGCACCAGACTGAGGTAGTCGGGCTAATACCAACCAACATCGCGG
CCGCCTGGGTTTTCGTTGAGTGGCGCCTGCTCGAAACACAGGGCTTGATG
TGTGACCCCATTTGCCTTTGTCGTCCCAATCATACTCAGAGCTTAGACGA
TAGCTCCATCGCCAAAGAACCAACGGAATATTGAAATATTCACATCCGCC
CTCCCTCCCCTTATAGCTTGACGTACAATGATATCAATAAATCATTGTTT
GACAGCCCCAATGATTCGGTTACTGGAGTTATGTTTTCACTTGCATCAAC
TCGTATCCAATTTATGCCGACACGCTTCATTTCCCCCCAAAACAATAAAG
ATTTCAGAAACATAGAGCGAGCGTTGGGGTCCCACCTTTTCAAGAGGGAA
GATGGTCCAAGCTACACCCATTCCCCCCCTCCCCCCTGAATTGCCGATTA
CATAGAAGTTTTTGCTCCGCATGGATGGCAAGTGTCTCCCTTCCCTACGA
GACCGCCGCCTACTTCCCCCCTCATTGTGATGATGCTGCTGCAAACATCA
CTATACGACAGGCCTTGACTATTCAGTGGGAGCGACTGCCGCGGCGGGAA
CGCGACAAGCTCGACCGTCAGCACAAGCTAGCCAACTCTCGCTTCCGGGT
CACGGAGCAAGCTCGACAGAACAGCAGCATACCCTTGTCGATT back to topCoding sequence (CDS) from alignment at S-dermatodea_contig8172:2592..7034+ >mRNA_S-dermatodea_contig8172.16370.1 ID=mRNA_S-dermatodea_contig8172.16370.1|Name=mRNA_S-dermatodea_contig8172.16370.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=4716bp|location=Sequence derived from alignment at S-dermatodea_contig8172:2592..7034+ (Saccorhiza dermatodea SderLu1190fm monoicous) ATGGAGCGGGAAGTGCGTGACGTTTTAAACGCGCTAACTGGATGCGTTGC CATGCGCTGCACTGTGGAGAAAAACCTCGAGGAGATCGCAGACATCGAGA TGGAGCGGGAAGTGCGTGACGTTTTAAACGCGCTAACTGGATGCGTTGCC ATGCGCTGCACTGTGGAGAAAAACCTCGAGGAGATCGCAGACATCGAGAG GAGGCAGCGGGATCAATGGGAACGAGAGCTATCTTCTTCGTGCGCCGACC CGGCGGCTATTCTTCCACCCTTTGAAGTCCCAAGGCCTCGGGTTAGGGGG CGCAACAAAAACACGTATGTGGAACCTACCGTGAAGGACTGTGGTGGTGA TCGTCGCAGCACCTATGAAAATTTCAGCGTATATGGAGTGCACTTGGCAG TCGAGGAGCATATTGTGGTCGCCGATTCCAGCAGCCAGACGAACTTTGAT CAACCGTGCAACTCGTCTCCTGCGGGTGAGAGGCCAGAGGAGCAGAAAAT GACTAAGGTTCCGTCCTTGGGAAGCGCCAAATTTCTGTTCAATCACGCTC TCGAGCACCACAAGGGCAACGGACCAGACTCGCTGATATCACGGGTGCGC GGAGTAGGGGGGGTGGGCCACTCAGCAAACCTGTATGGCAACAATAGTAG TAGTAGAAGCAGCGGCAACGCATACAAATGGGATTGTAAGATGGCCCAAC TTAGAAGATCCTCCAGCCCTTTCAAACTGGACGTTTGTGTGCAGCAACGT TTGGACAGTTATGGCTTCGGTGAGGGTGTCTGCTCCAGCTCTCTCGAGCC GGCAAACGCAAATACGTCGGTGGATACGCCCGGAGGCCCTTCTTTAAGGG GTAAGGCCCGAGCTGTCGGCCATAACGTAGTCAGAAGATCGGTGGCGACG ATCTATCGAAACCCCTTAAGCGGAGGCACCTGGCTGGATCCCGAGATGTC TCGCATGCAGGACAACCAAGACTCGCAATTTGTCAGCCCCCACGGCCTTA ATTTCGAAGCGGCGGCTTGGCCGGGCCCGAGAAAAAACAGAAGATGGCGC GGGGGAACCACCATGGGCATGGGTTGCTGGCGTGAGACTCTGCGCGTCAC CGCTCGGAGAAGAGGAGGCGAGCCCGGCGGCGGGGAGATACAGCCGCAAA GGCGACGAGTGCGCGTTCGCGATGTCAGGGGCACTTTTCAGCGGCACGAT CCAAGCACGAGTGAGGGCAGGAACGATCCATCAGGGCAATCGGGTATGAA GAGGAGGCAGCGGGATCAATGGGAACGAGAGCTATCTTCTTCGTGCGCCG ACCCGGCGGCTATTCTTCCACCCTTTGAAGTCCCAAGGCCTCGGGTTAGG GGGCGCAACAAAAACACGTATGTGGAACCTACCGTGAAGGACTGTGGTGG TGATCGTCGCAGCACCTATGAAAATTTCAGCGTATATGGAGTGCACTTGG CAGTCGAGGAGCATATTGTGGTCGCCGATTCCAGCAGCCAGACGAACTTT GATCAACCGTGCAACTCGTCTCCTGCGGGTGAGAGGCCAGAGGAGCAGAA AATGACTAAGGTTCCGTCCTTGGGAAGCGCCAAATTTCTGTTCAATCACG CTCTCGAGCACCACAAGGGCAACGGACCAGACTCGCTGATATCACGGGTG CGCGGAGTAGGGGGGGTGGGCCACTCAGCAAACCTGTATGGCAACAATAG TAGTAGTAGAAGCAGCGGCAACGCATACAAATGGGATTGTAAGATGGCCC AACTTAGAAGATCCTCCAGCCCTTTCAAACTGGACGTTTGTGTGCAGCAA CGTTTGGACAGTTATGGCTTCGGTGAGGGTGTCTGCTCCAGCTCTCTCGA GCCGGCAAACGCAAATACGTCGGTGGATACGCCCGGAGGCCCTTCTTTAA GGGGTAAGGCCCGAGCTGTCGGCCATAACGTAGTCAGAAGATCGGTGGCG ACGATCTATCGAAACCCCTTAAGCGGAGGCACCTGGCTGGATCCCGAGAT GTCTCGCATGCAGGACAACCAAGACTCGCAATTTGTCAGCCCCCACGGCC TTAATTTCGAAGCGGCGGCTTGGCCGGGCCCGAGAAAAAACAGAAGATGG CGCGGGGGAACCACCATGGGCATGGGTTGCTGGCGTGAGACTCTGCGCGT CACCGCTCGGAGAAGAGGAGGCGAGCCCGGCGGCGGGGAGATACAGCCGC AAAGGCGACGAGTGCGCGTTCGCGATGTCAGGGGCACTTTTCAGCGGCAC GATCCAAGCACGAGTGAGGGCAGGAACGATCCATCAGGGCAATCGGGTAT GAAGGGGGCGTGCCTGGGGCGTTCTGGAGGGGGGCGTGGGTCGGGGTCGA CGTGCAGTCATTCCGATCTTCACCAAGCAAGACATCATGCCGGTAACGGC GTGCCCCCTCGCGGCTCGTCTGCTAGAGCAAGAAAACGAGTAGCCACGCC CTCGTTGCAACGAGAAATGCTCCTCGACACTCAGGTTCCTGAACGAGCCT CGTCTGGATTCGTAGACGAAGGACCAACCTGTGCAGAATACCCCAATACG CTGAGATACAACGGGAAGAGGGAGCAAGCTGATGGTGGAAATACCCAAAG AGCACGCTCCTACCCCAGCAGTGCGGGGGACGGCTCGGAACCACGGCACG CCCCGCTTGTTGTCCACTCAATATGTCTGATCGGCTGTAAGCTGGAATGT CCCTCTGCGGAAGTCTTCTTGCGGGGTCAGGAAATTGGCAACGATTCTTC CCTATCATCTGGGGTTGACGAAAATAATCGACAAGATCCATCCACAAGCC GGCAGGACGGCAGTAAGAGAAGCTCCGCCATTCACCTTGTCGCTGGGCCC CAAACACCACCAACTCCAAGGGCAGCCGATGTTGGCGAGAACAGGAATAC GTGTGGTGCTGCTCGTGTCTGGAGTGGCAGTGACGACACTACGGCGGGGA TATCGGGGACAATGTCCGGGTCTCCACCTCCTAGATCAAAGTCCCATGTT CAAAGCGGTGACCGCTCGAGAGAAGCTCCACAATGGGAAGGGTCGCGGCG AACGGAGAAGCATAATAGCGGTACACGTGAGCCTTTAGGAGACCGAGGGC GAGGAATGGCGCAGTCGGTCGCGGCGGTGCGAACGTTTCAGTTTCGCACT CCAGGACTTGTGAGCACGGTGTTGGCGGTGCGAGATCCCCCCCACGTCCG TCGACAGCAACATCAGCAGCAACAACAACAGCAACACTCGTATCGACAGA AGCAGCTCCTTACGTGGCAACCGTCACAGCAGGGAAGGGCTTTGAGCAAC GAACAGGAATTTACATCAGAGGGGCGTGCCTGGGGCGTTCTGGAGGGGGG CGTGGGTCGGGGTCGACGTGCAGTCATTCCGATCTTCACCAAGCAAGACA TCATGCCGGTAACGGCGTGCCCCCTCGCGGCTCGTCTGCTAGAGCAAGAA AACGAGTAGCCACGCCCTCGTTGCAACGAGAAATGCTCCTCGACACTCAG GTTCCTGAACGAGCCTCGTCTGGATTCGTAGACGAAGGACCAACCTGTGC AGAATACCCCAATACGCTGAGATACAACGGGAAGAGGGAGCAAGCTGATG GTGGAAATACCCAAAGAGCACGCTCCTACCCCAGCAGTGCGGGGGACGGC TCGGAACCACGGCACGCCCCGCTTGTTGTCCACTCAATATGTCTGATCGG CTGTAAGCTGGAATGTCCCTCTGCGGAAGTCTTCTTGCGGGGTCAGGAAA TTGGCAACGATTCTTCCCTATCATCTGGGGTTGACGAAAATAATCGACAA GATCCATCCACAAGCCGGCAGGACGGCAGTAAGAGAAGCTCCGCCATTCA CCTTGTCGCTGGGCCCCAAACACCACCAACTCCAAGGGCAGCCGATGTTG GCGAGAACAGGAATACGTGTGGTGCTGCTCGTGTCTGGAGTGGCAGTGAC GACACTACGGCGGGGATATCGGGGACAATGTCCGGGTCTCCACCTCCTAG ATCAAAGTCCCATGTTCAAAGCGGTGACCGCTCGAGAGAAGCTCCACAAT GGGAAGGGTCGCGGCGAACGGAGAAGCATAATAGCGGTACACGTGAGCCT TTAGGAGACCGAGGGCGAGGAATGGCGCAGTCGGTCGCGGCGGTGCGAAC GTTTCAGTTTCGCACTCCAGGACTTGTGAGCACGGTGTTGGCGGTGCGAG ATCCCCCCCACGTCCGTCGACAGCAACATCAGCAGCAACAACAACAGCAA CACTCGTATCGACAGAAGCAGCTCCTTACGTGGCAACCGTCACAGCAGGG AAGGGCTTTGAGCAACGAACAGGAATTTACATCAGAGAAAGAAAAACACA TCATGTTTCTGACCAGGCGCTTGAAGCAGCTGATACAGCTAGAGGAAAGA AAAACACATCATGTTTCTGACCAGGCGCTTGAAGCAGCTGATACAGCTAG AGGCCTTGACTATTCAGTGGGAGCGACTGCCGCGGCGGGAACGCGACAAG CTCGACCGTCAGCACAAGCTAGCCAACTCTCGCTTCCGGGTCACGGAGCA AGCTCGACAGAACAGCAGCATACCCTTGTCGATTGCCTTGACTATTCAGT GGGAGCGACTGCCGCGGCGGGAACGCGACAAGCTCGACCGTCAGCACAAG CTAGCCAACTCTCGCTTCCGGGTCACGGAGCAAGCTCGACAGAACAGCAG CATACCCTTGTCGATT back to top
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