mRNA_S-dermatodea_contig815.16345.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig815.16345.1 vs. uniprot
Match: A0A6H5L0D9_9PHAE (PIG-H domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0D9_9PHAE) HSP 1 Score: 301 bits (770), Expect = 6.530e-100 Identity = 173/261 (66.28%), Postives = 187/261 (71.65%), Query Frame = 1
Query: 46 MYTCERLGENATEFRYAPIDSGHSGGAGGAWARTAVTVAGASLFAQQSLSTKGSGCLGVVGLILVLSCVAWSLGCRSRVREESLLVVRELGVQVTTKYVDGREKSTFLDKAKIKAILINEGITMHRVVFYLAFVVEGRDKMVVAFENLKPRLHILVKIYRGTRAAILGEAGDGQPLDDD----RGFDADM-----AASAAXXXXXXXXXXXXXXXXXXXXXX----------RTDRIARRQARTE---ASAAALGWPPPHM 762
MYTCERLGENAT+F+YAP D HS GGAW R A+ VAGASLF QQSL+ KGS LG VGL++ L C+AWSLGCRSRVREESLLVVRELGVQVTT YVDGREKSTFLDKAKIKAILINEGITMHRVVFYLAFVV GRDKMVVAFENL+PRL++L+KIYRGTRAAILGEAGD Q + GFDA A+ AA RTDRIARRQA+ ASAAA GWPPPHM
Sbjct: 1 MYTCERLGENATKFKYAPGDGDHS--CGGAWVRAAIAVAGASLFGQQSLAVKGSAFLGGVGLVVALFCLAWSLGCRSRVREESLLVVRELGVQVTTTYVDGREKSTFLDKAKIKAILINEGITMHRVVFYLAFVVAGRDKMVVAFENLQPRLNVLIKIYRGTRAAILGEAGDEQQSRTNDMMSMGFDAGAPGFPTASEAAPTTGIVGGGGGEIGEPRIGPRAAGRRGDSGLRRTDRIARRQAQARLAGASAAASGWPPPHM 259
BLAST of mRNA_S-dermatodea_contig815.16345.1 vs. uniprot
Match: A0A397THB2_9GLOM (GPI-GlcNAc transferase complex, PIG-H component-domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397THB2_9GLOM) HSP 1 Score: 114 bits (284), Expect = 2.260e-28 Identity = 55/101 (54.46%), Postives = 77/101 (76.24%), Query Frame = 1
Query: 274 SRVREESLLVVRELGVQVTTKYVDGREKSTFLDKAKIKAILINEGITMHRVVFYLAFVVEGRDKMVVAFENLKPRLHILVKIYRGTRAAILGEAGDGQPLD 576
S VREES+L VR++G+QV T Y++GR S F+D++KI I+INEGITM +V FY+ +VEGRD+MVV FE+L P+L++L+++YRGTR I E + LD
Sbjct: 11 SIVREESILSVRDVGIQVKTIYMNGRSVSRFIDRSKISDIIINEGITMLQVKFYMVIIVEGRDRMVVVFEHLLPKLNVLLQVYRGTRYVIFNEIEENSDLD 111
BLAST of mRNA_S-dermatodea_contig815.16345.1 vs. uniprot
Match: A0A015KF86_RHIIW (PIG-H domain-containing protein n=5 Tax=Rhizophagus TaxID=1129544 RepID=A0A015KF86_RHIIW) HSP 1 Score: 111 bits (278), Expect = 1.580e-26 Identity = 52/99 (52.53%), Postives = 77/99 (77.78%), Query Frame = 1
Query: 280 VREESLLVVRELGVQVTTKYVDGREKSTFLDKAKIKAILINEGITMHRVVFYLAFVVEGRDKMVVAFENLKPRLHILVKIYRGTRAAILGEAGDGQPLD 576
V+EES+L +R++G+QV T Y++GR S F+DK+KI I+INEGITM +V FY+A +V+G+D+MVV FE+L P+L+IL+++YRGTR I E + +D
Sbjct: 93 VKEESILSIRDVGIQVKTIYMNGRSVSKFIDKSKISDIIINEGITMLQVKFYMAIIVDGQDRMVVVFEHLLPKLNILLQVYRGTRYVIFNEIEENSDID 191
BLAST of mRNA_S-dermatodea_contig815.16345.1 vs. uniprot
Match: D3BEJ0_POLPP (Putative glycosyltransferase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BEJ0_POLPP) HSP 1 Score: 110 bits (276), Expect = 2.680e-26 Identity = 53/91 (58.24%), Postives = 75/91 (82.42%), Query Frame = 1
Query: 280 VREESLLVVRELGVQVTTKYVDGREKSTFLDKAKIKAILINEGITMHRVVFYLAFVVEGRDKMVVAFENLKPRLHILVKIYRGTRAAILGE 552
VREESL V+RELGVQ+ KY E + F++K KI++I+INEGI+ +RV FY+AF+VEG+ KMV+AF++L PR+++L+KIYRGTR+ + GE
Sbjct: 105 VREESLTVIRELGVQLRKKYYFIGESTRFIEKPKIQSIIINEGISRYRVTFYMAFLVEGKQKMVLAFDDLIPRINVLLKIYRGTRSLMYGE 195
BLAST of mRNA_S-dermatodea_contig815.16345.1 vs. uniprot
Match: UPI0006450F5E (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006450F5E) HSP 1 Score: 108 bits (271), Expect = 5.830e-26 Identity = 52/111 (46.85%), Postives = 85/111 (76.58%), Query Frame = 1
Query: 220 VVGLILVLSCVAWSLGCRSRVREESLLVVRELGVQVTTKYVDGREKSTFLDKAKIKAILINEGITMHRVVFYLAFVVEGRDKMVVAFENLKPRLHILVKIYRGTRAAILGE 552
++ +I + C+ + +REESL V+RELG+Q+ KY+ +E F++K++I +I+INEGI+ +RVV+Y+AF+VEG+ KM++AF++L PR+++L+KIYRGTRA + GE
Sbjct: 57 IIAIIAIRLCLKMFI-----IREESLTVIRELGIQLRKKYLL-KETVEFIEKSRISSIIINEGISRYRVVYYMAFIVEGKQKMILAFDDLIPRINVLLKIYRGTRALMYGE 161
BLAST of mRNA_S-dermatodea_contig815.16345.1 vs. uniprot
Match: A0A8J4Q2G5_9MYCE (PIG-H domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q2G5_9MYCE) HSP 1 Score: 108 bits (269), Expect = 1.150e-25 Identity = 52/88 (59.09%), Postives = 72/88 (81.82%), Query Frame = 1
Query: 280 VREESLLVVRELGVQVTTKYVDGREKSTFLDKAKIKAILINEGITMHRVVFYLAFVVEGRDKMVVAFENLKPRLHILVKIYRGTRAAI 543
V+EESL+V+RELGVQ+ KY + F+DK KI+ ++INEGIT H V+FY+AF+VEG++KMV+AFE+L PRL+IL++IYRGT + I
Sbjct: 75 VKEESLIVMRELGVQIKRKYFLRPDTLEFIDKNKIQNVIINEGITKHNVIFYMAFIVEGKNKMVLAFEDLIPRLNILLQIYRGTLSVI 162
BLAST of mRNA_S-dermatodea_contig815.16345.1 vs. uniprot
Match: A0A0G4IJ79_PLABS (PIG-H domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IJ79_PLABS) HSP 1 Score: 108 bits (269), Expect = 1.320e-25 Identity = 59/121 (48.76%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 190 LSTKGSGCLGVVGLILVLSCVAWSL-GCRSRVREESLLVVRELGVQVTTKYVDGREKSTFLDKAKIKAILINEGITMHRVVFYLAFVVEGRDKMVVAFENLKPRLHILVKIYRGTRAAILG 549
++ KGS + ++L + W + S V EESLLVV+ELGVQ+T K G+ F+DK KI +I+INEGIT RV+FY+AF+VEG+ MV+AF +L PR+ +L+ IYRG RAA+ G
Sbjct: 45 VAVKGSIAVTDSAVLLAVGMAVWRVTAAMSSVCEESLLVVQELGVQITRKTYSGKSSHIFIDKDKISSIVINEGITAWRVIFYMAFIVEGQSDMVLAF-SLLPRMAVLLPIYRGIRAAVYG 164
BLAST of mRNA_S-dermatodea_contig815.16345.1 vs. uniprot
Match: A0A0H5RAZ1_9EUKA (PIG-H domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RAZ1_9EUKA) HSP 1 Score: 108 bits (269), Expect = 1.320e-25 Identity = 61/128 (47.66%), Postives = 85/128 (66.41%), Query Frame = 1
Query: 172 LFAQQSLSTKGSGCLGVVGLILVLSCVAWSL-GCRSRVREESLLVVRELGVQVTTKYVDGREKSTFLDKAKIKAILINEGITMHRVVFYLAFVVEGRDKMVVAFENLKPRLHILVKIYRGTRAAILGE 552
L+ S++ + S L LI+ + + W + V EE+LLVV+ELGVQ+T K G+E F+DK KI +I+INEGITM RV++Y+AF+V G+ MV+AF NL PR+ +L+ IY GTRAA GE
Sbjct: 39 LYILISIACRQSIILTDPFLIICICLMTWRITSLMKTVCEETLLVVQELGVQITRKSFSGKESHVFIDKDKISSIVINEGITMFRVIYYMAFIVNGQSDMVLAF-NLLPRMGVLLPIYVGTRAAFYGE 165
BLAST of mRNA_S-dermatodea_contig815.16345.1 vs. uniprot
Match: A0A397VZ59_9GLOM (GPI-GlcNAc transferase complex, PIG-H component-domain-containing protein (Fragment) n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397VZ59_9GLOM) HSP 1 Score: 105 bits (262), Expect = 2.390e-25 Identity = 47/91 (51.65%), Postives = 73/91 (80.22%), Query Frame = 1
Query: 283 REESLLVVRELGVQVTTKYVDGREKSTFLDKAKIKAILINEGITMHRVVFYLAFVVEGRDKMVVAFENLKPRLHILVKIYRGTRAAILGEA 555
++ES+L +R++G+QV T Y++GR S F++++KI I+INEGITM +V FY+A +VEG+DKMVV F++L P+ IL+++YRGTR+ I E+
Sbjct: 1 QKESILSIRDIGIQVETVYINGRTVSRFIERSKISDIIINEGITMLQVKFYMAIIVEGQDKMVVVFQHLLPKYSILIQVYRGTRSIIFNES 91
BLAST of mRNA_S-dermatodea_contig815.16345.1 vs. uniprot
Match: A0A6B2LLF0_9EUKA (PIG-H domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LLF0_9EUKA) HSP 1 Score: 104 bits (260), Expect = 8.880e-25 Identity = 47/90 (52.22%), Postives = 70/90 (77.78%), Query Frame = 1
Query: 280 VREESLLVVRELGVQVTTKYVDGREKSTFLDKAKIKAILINEGITMHRVVFYLAFVVEGRDKMVVAFENLKPRLHILVKIYRGTRAAILG 549
V+EESLLV+R+LGVQ+ TKY G S F+D+ KIK+I+INEGITM ++FY+A +V ++KMV+ F+ L+PR+ L+ I++G+RA + G
Sbjct: 36 VKEESLLVIRDLGVQINTKYYSGGGTSEFIDRKKIKSIIINEGITMGDIIFYMAIIVRKKEKMVIVFKTLRPRIDTLLDIFKGSRAIMFG 125 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig815.16345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig815.16345.1 >prot_S-dermatodea_contig815.16345.1 ID=prot_S-dermatodea_contig815.16345.1|Name=mRNA_S-dermatodea_contig815.16345.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=257bp PHQASPTHPPSAATRMYTCERLGENATEFRYAPIDSGHSGGAGGAWARTAback to top mRNA from alignment at S-dermatodea_contig815:11068..14099- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig815.16345.1 ID=mRNA_S-dermatodea_contig815.16345.1|Name=mRNA_S-dermatodea_contig815.16345.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3032bp|location=Sequence derived from alignment at S-dermatodea_contig815:11068..14099- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig815:11068..14099- >mRNA_S-dermatodea_contig815.16345.1 ID=mRNA_S-dermatodea_contig815.16345.1|Name=mRNA_S-dermatodea_contig815.16345.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1542bp|location=Sequence derived from alignment at S-dermatodea_contig815:11068..14099- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |