mRNA_S-dermatodea_contig813.16329.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig813.16329.1 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI) HSP 1 Score: 54.3 bits (129), Expect = 4.630e-5 Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 1
Query: 181 IVDVRSNHCAHNGCSKIPSYGTKGSRKADLCSEHKRAGMM 300
+VDV S C H GC+K PSYG GS+KA+LC++H GM+
Sbjct: 1 MVDVVSKRCGHPGCTKRPSYGNDGSKKAELCAQHALQGMV 40 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig813.16329.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig813.16329.1 >prot_S-dermatodea_contig813.16329.1 ID=prot_S-dermatodea_contig813.16329.1|Name=mRNA_S-dermatodea_contig813.16329.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=582bp MAADGKRCFALDTSRRAIMVSALVRESSPTPSPAGFTPLPSQGSSDQSRVback to top mRNA from alignment at S-dermatodea_contig813:227..20968+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig813.16329.1 ID=mRNA_S-dermatodea_contig813.16329.1|Name=mRNA_S-dermatodea_contig813.16329.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=20742bp|location=Sequence derived from alignment at S-dermatodea_contig813:227..20968+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig813:227..20968+ >mRNA_S-dermatodea_contig813.16329.1 ID=mRNA_S-dermatodea_contig813.16329.1|Name=mRNA_S-dermatodea_contig813.16329.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3492bp|location=Sequence derived from alignment at S-dermatodea_contig813:227..20968+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |