mRNA_S-dermatodea_contig8099.16289.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8099.16289.1 vs. uniprot
Match: D7G0J5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J5_ECTSI) HSP 1 Score: 185 bits (469), Expect = 5.530e-54 Identity = 91/101 (90.10%), Postives = 96/101 (95.05%), Query Frame = 1
Query: 1 AELVDLLESLPGTKCLVLESHIGGLLNHVIPEGSKLLREKGVTYFRELRGELGEFRDRDGAASEPDHIVYLVRASIPNMKIIADQINSRTRAGAAFDFRYK 303
AELVDLLESLPG+KCLVLESHIGGLLNHVIPEGSKLLREKGVTYFRELRGELG F DR+G +EPDHIVYLVRASIPN+KIIADQINSR +AGAAFDFRYK
Sbjct: 24 AELVDLLESLPGSKCLVLESHIGGLLNHVIPEGSKLLREKGVTYFRELRGELGAFEDRNGVKAEPDHIVYLVRASIPNVKIIADQINSRIKAGAAFDFRYK 124
BLAST of mRNA_S-dermatodea_contig8099.16289.1 vs. uniprot
Match: A0A6H5L2P5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2P5_9PHAE) HSP 1 Score: 185 bits (469), Expect = 4.710e-53 Identity = 91/101 (90.10%), Postives = 96/101 (95.05%), Query Frame = 1
Query: 1 AELVDLLESLPGTKCLVLESHIGGLLNHVIPEGSKLLREKGVTYFRELRGELGEFRDRDGAASEPDHIVYLVRASIPNMKIIADQINSRTRAGAAFDFRYK 303
AELVDLLESLPG+KCLVLESHIGGLLNHVIPEGSKLLREKGVTYFRELRGELG F DR+G +EPDHIVYLVRASIPN+KIIADQINSR +AGAAFDFRYK
Sbjct: 24 AELVDLLESLPGSKCLVLESHIGGLLNHVIPEGSKLLREKGVTYFRELRGELGAFEDRNGVKAEPDHIVYLVRASIPNVKIIADQINSRIKAGAAFDFRYK 124
BLAST of mRNA_S-dermatodea_contig8099.16289.1 vs. uniprot
Match: A0A1Z9QCA2_9BACT (Uncharacterized protein n=1 Tax=Phycisphaeraceae bacterium TMED231 TaxID=1986831 RepID=A0A1Z9QCA2_9BACT) HSP 1 Score: 115 bits (289), Expect = 5.260e-28 Identity = 55/101 (54.46%), Postives = 78/101 (77.23%), Query Frame = 1
Query: 1 AELVDLLESLPGTKCLVLESHIGGLLNHVIPEGSKLLREKGVTYFRELRGELGEFRDRDGAASEPDHIVYLVRASIPNMKIIADQINSRTRAGAAFDFRYK 303
+EL+++L++L G KCLVL++ +GG LNH++ +GS+LL+E GV +FRELR ELG+F DG +PDHI+YLVR SI +MK+IA QI +R + GA FRY+
Sbjct: 14 SELLEILDTLQGRKCLVLDTQLGGRLNHILADGSRLLKENGVVFFRELRAELGDFPIADGG--DPDHILYLVRPSIAHMKLIASQIRTRIKQGAPEAFRYQ 112
BLAST of mRNA_S-dermatodea_contig8099.16289.1 vs. uniprot
Match: A0A835YTK2_9STRA (Sec1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK2_9STRA) HSP 1 Score: 109 bits (273), Expect = 8.220e-26 Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 4 ELVDLLESLPGTKCLVLESHIGGLLNHVIPEGSKLLREKGVTYFREL-RGELGEFRD-RDGAASEPDHIVYLVRASIPNMKIIADQINSRTRAGAAFDFRYK 303
EL+ LL +LPG KCLVL+ +GGLLNHVIPEG+KLLREKGV + R+L G+LG +D G P+H+VYLVR S+ + K+IA Q+ RAG D+RYK
Sbjct: 25 ELITLLTALPGRKCLVLDRALGGLLNHVIPEGAKLLREKGVVHVRQLGSGDLGLPQDPHTGKPELPEHVVYLVRPSVAHTKLIAMQVQDGVRAGVPLDYRYK 126
BLAST of mRNA_S-dermatodea_contig8099.16289.1 vs. uniprot
Match: A0A7S3K6M0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6M0_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 8.490e-21 Identity = 52/97 (53.61%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 4 ELVDLLESLPGTKCLVLESHIGGLLNHVIPEGSKLLREKGVTYFRELRGE-LGEFRDRDGAASEPDHIVYLVRASIPNMKIIADQINSRTRAGAAFD 291
EL+++L+ PG+KCLVL++ +GG LNHV+ EG++LLRE GVT FRELRG+ LG F D EP HIVYLVRA M+ IA Q+ R+G D
Sbjct: 52 ELIEILDRWPGSKCLVLDAALGGRLNHVVVEGARLLREHGVTTFRELRGDDLGGFED------EPAHIVYLVRALPELMRPIAQQVKGLVRSGFTTD 142
BLAST of mRNA_S-dermatodea_contig8099.16289.1 vs. uniprot
Match: A0A7R9U870_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U870_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 2.410e-16 Identity = 47/104 (45.19%), Postives = 64/104 (61.54%), Query Frame = 1
Query: 4 ELVDLLESLPGTKCLVLESHIGGLLNHVIPEGSKLLREKGVTYFRELR-GELGEFR----DRDGAASEPDHIVYLVRASIPNMKIIADQINSRTRAGAAFDFRY 300
EL+++L + PGTKCLV + I GL+NHV+ EGSKLL E GV FRE++ G L + R DR EPDH++YL R I ++ IA + SR +A + Y
Sbjct: 24 ELLEILSAFPGTKCLVFDPDITGLVNHVVVEGSKLLSEAGVALFREIKDGALDDLRFGKEDR-----EPDHVLYLTRPRIKRVQQIAAHVKSRAAMPSAGNLSY 122
BLAST of mRNA_S-dermatodea_contig8099.16289.1 vs. uniprot
Match: A0A482RPQ6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RPQ6_9ARCH) HSP 1 Score: 73.2 bits (178), Expect = 5.880e-14 Identity = 36/98 (36.73%), Postives = 63/98 (64.29%), Query Frame = 1
Query: 4 ELVDLLESLPGTKCLVLESHIGGLLNHVIPEGSKLLREKGVTYFRELRGELGEFRDRDGAASEPDHIVYLVRASIPNMKIIADQINSRTRAGAAFDFR 297
EL D+L+S+ G KCL++++ + GLL V+ EGSK +E+ V +F+EL +L E R+ + P+H VYL+ AS +M+I++ + + T+ + F+
Sbjct: 44 ELQDILQSIRGRKCLIVDNQLEGLLREVVAEGSKWFKEQNVVHFKELDLDL-ELLVREVSREMPEHFVYLLHASPAHMQIVSRHVTTLTKLSSRCQFK 140
BLAST of mRNA_S-dermatodea_contig8099.16289.1 vs. uniprot
Match: A0A4D9D766_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D766_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 3.820e-12 Identity = 37/86 (43.02%), Postives = 59/86 (68.60%), Query Frame = 1
Query: 4 ELVDLLESLPGTKCLVLESHIGGLLNHVIPEGSKLLREKGVTYF-RELRGELGEFRDRDGAASEPDHIVYLVRASIPNMKIIADQI 258
EL+D+L++ G K LVL++ + GLL H++PEG+ LR+ GV + R L+ EL F +G EPD+I+Y VR S+ NM++++ Q+
Sbjct: 227 ELLDVLQAARGRKALVLDTALRGLLAHIVPEGTNFLRQHGVVHLCRGLQTEL-TFVTPEGRDDEPDNILYFVRPSLSNMRMLSAQL 311 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8099.16289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8099.16289.1 >prot_S-dermatodea_contig8099.16289.1 ID=prot_S-dermatodea_contig8099.16289.1|Name=mRNA_S-dermatodea_contig8099.16289.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=101bp AELVDLLESLPGTKCLVLESHIGGLLNHVIPEGSKLLREKGVTYFRELRGback to top mRNA from alignment at S-dermatodea_contig8099:4272..7887- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8099.16289.1 ID=mRNA_S-dermatodea_contig8099.16289.1|Name=mRNA_S-dermatodea_contig8099.16289.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3616bp|location=Sequence derived from alignment at S-dermatodea_contig8099:4272..7887- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8099:4272..7887- >mRNA_S-dermatodea_contig8099.16289.1 ID=mRNA_S-dermatodea_contig8099.16289.1|Name=mRNA_S-dermatodea_contig8099.16289.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=606bp|location=Sequence derived from alignment at S-dermatodea_contig8099:4272..7887- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |