mRNA_S-dermatodea_contig8094.16286.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig8094.16286.1 vs. uniprot
Match: A0A6H5J9P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9P9_9PHAE) HSP 1 Score: 160 bits (406), Expect = 1.440e-43 Identity = 91/153 (59.48%), Postives = 115/153 (75.16%), Query Frame = 2
Query: 14 MPPIPHALHLSRLGRNDGAWENGVLAAAMGAQRVTFSAGDPTSSSVPKNRSAGKEQSSNSNMDEETRKSIGESDEKAKKSMQTVKLALAGNLVITVAKFLAYMHSGSSAMSSEAMHSLVDAANQLLLVVGLRSAATAPDKQHQYGYGKAVYFW 472
+P +P + L+ A G +AA AQ++ S+ + K+++ + + + MD ETR+SIGE D+K+KKSM+TVKLALAGNLVIT+ KFLAYMHSGSSAMSSEAMHSLVD+ANQLLLVVGLRSA+TAPDK+HQYGYGK+VYFW
Sbjct: 69 IPAVPRPVGLAGGDGKRSALGRGAMAAIARAQQMALSSDEGAGGLGSKSKA----EQAQAGMDAETRRSIGEGDKKSKKSMKTVKLALAGNLVITLGKFLAYMHSGSSAMSSEAMHSLVDSANQLLLVVGLRSASTAPDKRHQYGYGKSVYFW 217
BLAST of mRNA_S-dermatodea_contig8094.16286.1 vs. uniprot
Match: D7G7R8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7R8_ECTSI) HSP 1 Score: 142 bits (358), Expect = 4.990e-37 Identity = 83/132 (62.88%), Postives = 94/132 (71.21%), Query Frame = 2
Query: 164 SAGKEQSSNSNMDEETRKSIGESDEKAKKSMQTVK-----------------------------LALAGNLVITVAKFLAYMHSGSSAMSSEAMHSLVDAANQLLLVVGLRSAATAPDKQHQYGYGKAVYFW 472
S K + S + MD ETR+SIGE D+K+KKSM+TVK LALAGNLVIT+ KFLAYMHSGSSAMSSEAMHSLVD+ANQLLLVVGLRSA+TAPDK+HQYGYGK+VYFW
Sbjct: 23 SRSKAEQSQAGMDAETRRSIGEGDKKSKKSMKTVKPLTECCSSDDLSLARRRTCFLGRAWHRLQLALAGNLVITLGKFLAYMHSGSSAMSSEAMHSLVDSANQLLLVVGLRSASTAPDKRHQYGYGKSVYFW 154
BLAST of mRNA_S-dermatodea_contig8094.16286.1 vs. uniprot
Match: A0A7S4D571_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D571_HETAK) HSP 1 Score: 111 bits (277), Expect = 2.960e-28 Identity = 59/97 (60.82%), Postives = 74/97 (76.29%), Query Frame = 2
Query: 182 SSNSNMDEETRKSIGESDEKAKKSMQTVKLALAGNLVITVAKFLAYMHSGSSAMSSEAMHSLVDAANQLLLVVGLRSAATAPDKQHQYGYGKAVYFW 472
SS S+ DE ++I + KA SM+ VKLA+AGNLVIT AKF+++ +SGSSAM SEA+HSLVD NQ LL++GL +A PD +HQYGYGKAVYFW
Sbjct: 42 SSTSDADETYERAIKNASAKANSSMKGVKLAMAGNLVITTAKFMSWKYSGSSAMLSEAIHSLVDTGNQGLLLIGLNAARNIPDNRHQYGYGKAVYFW 138
BLAST of mRNA_S-dermatodea_contig8094.16286.1 vs. uniprot
Match: W7TG20_9STRA (Zinc transporter 9 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG20_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.240e-26 Identity = 53/75 (70.67%), Postives = 67/75 (89.33%), Query Frame = 2
Query: 248 KSMQTVKLALAGNLVITVAKFLAYMHSGSSAMSSEAMHSLVDAANQLLLVVGLRSAATAPDKQHQYGYGKAVYFW 472
KS VKLAL GN+VIT+AKFLA++HSGSSAM SE++HSLVD+ NQ LL++G+R+AATAPD+ HQYGYGK++YFW
Sbjct: 147 KSEHVVKLALGGNVVITIAKFLAWLHSGSSAMLSESIHSLVDSGNQTLLLIGIRAAATAPDRHHQYGYGKSIYFW 221
BLAST of mRNA_S-dermatodea_contig8094.16286.1 vs. uniprot
Match: A0A1W0A8Z9_9STRA (Zinc transporter n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8Z9_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 3.620e-20 Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 2
Query: 272 ALAGNLVITVAKFLAYMHSGSSAMSSEAMHSLVDAANQLLLVVGLRSAATAPDKQHQYGYGKAVYFW 472
A+AGN ITV KFLAY+ +GSSAM SEA+HSLVD NQ LL++GLR A+ PDK+HQYGYG+A YFW
Sbjct: 5 AMAGNTAITVLKFLAYLKTGSSAMLSEAIHSLVDTGNQGLLILGLRQASFQPDKKHQYGYGRAAYFW 71
BLAST of mRNA_S-dermatodea_contig8094.16286.1 vs. uniprot
Match: K0SKH5_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SKH5_THAOC) HSP 1 Score: 94.4 bits (233), Expect = 1.610e-19 Identity = 48/80 (60.00%), Postives = 59/80 (73.75%), Query Frame = 2
Query: 233 DEKAKKSMQTVKLALAGNLVITVAKFLAYMHSGSSAMSSEAMHSLVDAANQLLLVVGLRSAATAPDKQHQYGYGKAVYFW 472
DE +M+ V+ ALAGN VI AK LA + SGSSAM SE +HS+VD NQ LL+VGL ++ APD+ HQYGYGKA+YFW
Sbjct: 236 DESRGAAMKNVQRALAGNFVIASAKLLAALSSGSSAMMSEFVHSVVDCGNQALLLVGLSASQNAPDRNHQYGYGKAIYFW 315
BLAST of mRNA_S-dermatodea_contig8094.16286.1 vs. uniprot
Match: F0WBY3_9STRA (Zinc transporter putative n=2 Tax=Albugo TaxID=65356 RepID=F0WBY3_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.750e-19 Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 2
Query: 272 ALAGNLVITVAKFLAYMHSGSSAMSSEAMHSLVDAANQLLLVVGLRSAATAPDKQHQYGYGKAVYFW 472
A+AGN IT+ K LA++ +GSSAM SEA+HSLVD NQ +LV+GLR AA PDK+HQYGYG+A YFW
Sbjct: 3 AMAGNTAITILKTLAWLKTGSSAMLSEAIHSLVDTGNQAILVLGLRQAAGVPDKKHQYGYGRAAYFW 69
BLAST of mRNA_S-dermatodea_contig8094.16286.1 vs. uniprot
Match: A0A485KXT3_9STRA (Aste57867_12533 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXT3_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.030e-19 Identity = 46/74 (62.16%), Postives = 57/74 (77.03%), Query Frame = 2
Query: 251 SMQTVKLALAGNLVITVAKFLAYMHSGSSAMSSEAMHSLVDAANQLLLVVGLRSAATAPDKQHQYGYGKAVYFW 472
S V A+AGN +IT KF+AY+ +GSSAM SEA+HSLVD NQ LL++GLR A+ PDK+HQYGYG+A YFW
Sbjct: 167 SQDMVFRAMAGNTLITSLKFMAYLKTGSSAMLSEAIHSLVDTGNQGLLILGLRQASHQPDKKHQYGYGRAAYFW 240
BLAST of mRNA_S-dermatodea_contig8094.16286.1 vs. uniprot
Match: A0A024UAM7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UAM7_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 4.160e-19 Identity = 45/74 (60.81%), Postives = 56/74 (75.68%), Query Frame = 2
Query: 251 SMQTVKLALAGNLVITVAKFLAYMHSGSSAMSSEAMHSLVDAANQLLLVVGLRSAATAPDKQHQYGYGKAVYFW 472
S V A+AGN +IT K +AY+ +GSSAM SEA+HSLVD NQ LL++GLR A+ PDK+HQYGYG+A YFW
Sbjct: 130 SQDMVFRAMAGNTLITALKLMAYLKTGSSAMLSEAIHSLVDTGNQGLLILGLRQASFQPDKKHQYGYGRAAYFW 203
BLAST of mRNA_S-dermatodea_contig8094.16286.1 vs. uniprot
Match: A0A397FC77_9STRA (Uncharacterized protein (Fragment) n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FC77_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 4.520e-19 Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 2
Query: 251 SMQTVKLALAGNLVITVAKFLAYMHSGSSAMSSEAMHSLVDAANQLLLVVGLRSAATAPDKQHQYGYGKAVYFW 472
S V A+AGN +IT K AY+ +GSSAM SEA+HSLVD NQ LL++GLR A+ PDK+HQYGYG+A YFW
Sbjct: 92 SQDMVFRAMAGNTLITALKLAAYLKTGSSAMLSEAIHSLVDTGNQGLLILGLRQASFQPDKKHQYGYGRAAYFW 165 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8094.16286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8094.16286.1 >prot_S-dermatodea_contig8094.16286.1 ID=prot_S-dermatodea_contig8094.16286.1|Name=mRNA_S-dermatodea_contig8094.16286.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=154bp MPPIPHALHLSRLGRNDGAWENGVLAAAMGAQRVTFSAGDPTSSSVPKNRback to top mRNA from alignment at S-dermatodea_contig8094:4417..8670+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig8094.16286.1 ID=mRNA_S-dermatodea_contig8094.16286.1|Name=mRNA_S-dermatodea_contig8094.16286.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4254bp|location=Sequence derived from alignment at S-dermatodea_contig8094:4417..8670+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig8094:4417..8670+ >mRNA_S-dermatodea_contig8094.16286.1 ID=mRNA_S-dermatodea_contig8094.16286.1|Name=mRNA_S-dermatodea_contig8094.16286.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=924bp|location=Sequence derived from alignment at S-dermatodea_contig8094:4417..8670+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |