mRNA_S-dermatodea_contig80843.16274.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig80843.16274.1 vs. uniprot
Match: D7FWW4_ECTSI (Protein required for templated centriole assembly n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW4_ECTSI) HSP 1 Score: 68.6 bits (166), Expect = 3.180e-12 Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = 1
Query: 16 KRYLILTYAAEFDRVHYPLPLARVELPAREKLERTIGRLGE 138
KRYLILTYAAE+DRVHYPLPLA V+ P R++LERTI RL E
Sbjct: 152 KRYLILTYAAEYDRVHYPLPLAFVDSPQRQQLERTIDRLRE 192
BLAST of mRNA_S-dermatodea_contig80843.16274.1 vs. uniprot
Match: K3W5W9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W5W9_GLOUD) HSP 1 Score: 67.4 bits (163), Expect = 5.470e-12 Identity = 32/46 (69.57%), Postives = 36/46 (78.26%), Query Frame = 1
Query: 1 GGGSGKRYLILTYAAEFDRVHYPLPLARVELPAREKLERTIGRLGE 138
G S KRYLILTYA EFDRVHYPLPLA V+ P+ E L+RTI RL +
Sbjct: 151 GAASNKRYLILTYAVEFDRVHYPLPLALVQTPSPEILQRTIRRLRQ 196
BLAST of mRNA_S-dermatodea_contig80843.16274.1 vs. uniprot
Match: A0A6H5JQA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQA1_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 5.690e-12 Identity = 32/45 (71.11%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 4 GGSGKRYLILTYAAEFDRVHYPLPLARVELPAREKLERTIGRLGE 138
G RYLILTYAAE+DRVHYPLPLA V+ P R++LERTI RL E
Sbjct: 64 GNCHNRYLILTYAAEYDRVHYPLPLAFVDSPQRQQLERTIDRLRE 108
BLAST of mRNA_S-dermatodea_contig80843.16274.1 vs. uniprot
Match: A0A0P1B0U5_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0U5_PLAHL) HSP 1 Score: 66.2 bits (160), Expect = 2.090e-11 Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 1
Query: 10 SGKRYLILTYAAEFDRVHYPLPLARVELPAREKLERTIGRLGEV 141
SGKRYLILTYA EFDRVHYPLPL + + P+ E L+RTI RL +
Sbjct: 121 SGKRYLILTYAVEFDRVHYPLPLTQEQSPSPEVLQRTIRRLSQA 164
BLAST of mRNA_S-dermatodea_contig80843.16274.1 vs. uniprot
Match: A0A8J5MGL1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MGL1_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 9.660e-11 Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 7 GSGKRYLILTYAAEFDRVHYPLPLARVELPAREKLERTIGRLGEV 141
G+GKRYLILTYA EFDRVHYPLPL + P+ E L+RTI RL +
Sbjct: 119 GNGKRYLILTYAVEFDRVHYPLPLIQELSPSPEVLQRTIRRLRQA 163
BLAST of mRNA_S-dermatodea_contig80843.16274.1 vs. uniprot
Match: A0A8K1FMF0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMF0_PYTOL) HSP 1 Score: 63.9 bits (154), Expect = 1.360e-10 Identity = 30/42 (71.43%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 16 KRYLILTYAAEFDRVHYPLPLARVELPAREKLERTIGRLGEV 141
KRYLILTYA EFDRVHYPLPL VE P E L+RTI RL +
Sbjct: 139 KRYLILTYAVEFDRVHYPLPLQLVETPTPETLQRTIRRLRQA 180
BLAST of mRNA_S-dermatodea_contig80843.16274.1 vs. uniprot
Match: A0A329RWN2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RWN2_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.870e-10 Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 1
Query: 7 GSGKRYLILTYAAEFDRVHYPLPLARVELPAREKLERTIGRLGEV 141
G+GKRYLILTYA EFDRVHYPLPL + P E L+RTI RL +
Sbjct: 119 GNGKRYLILTYAVEFDRVHYPLPLIQELSPPPEVLQRTIRRLRQA 163
BLAST of mRNA_S-dermatodea_contig80843.16274.1 vs. uniprot
Match: A0A3R7AUF9_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AUF9_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 3.520e-10 Identity = 29/44 (65.91%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 10 SGKRYLILTYAAEFDRVHYPLPLARVELPAREKLERTIGRLGEV 141
+ KRYLILTYA EFDRVHYPLPL VE P+ L+RTI RL +
Sbjct: 72 NNKRYLILTYAVEFDRVHYPLPLNFVETPSPAMLQRTIRRLKQT 115
BLAST of mRNA_S-dermatodea_contig80843.16274.1 vs. uniprot
Match: A0A0W8DCY4_PHYNI (MORN repeat-containing protein 3 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DCY4_PHYNI) HSP 1 Score: 62.4 bits (150), Expect = 4.650e-10 Identity = 29/44 (65.91%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 10 SGKRYLILTYAAEFDRVHYPLPLARVELPAREKLERTIGRLGEV 141
+GKRYLILTYA EFDRVHYPLPL P+ E L+RTI RL +
Sbjct: 121 TGKRYLILTYAVEFDRVHYPLPLTHEVSPSPEVLQRTIRRLRQA 164
BLAST of mRNA_S-dermatodea_contig80843.16274.1 vs. uniprot
Match: A0A2P4XEK5_9STRA (Viable flagellar protein number 3 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XEK5_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 4.760e-10 Identity = 29/43 (67.44%), Postives = 34/43 (79.07%), Query Frame = 1
Query: 10 SGKRYLILTYAAEFDRVHYPLPLARVELPAREKLERTIGRLGE 138
+GKRYLILTYA EFDRVHYPLPL + P+ E L+RTI RL +
Sbjct: 115 NGKRYLILTYAVEFDRVHYPLPLTQEISPSAEVLQRTIRRLRQ 157 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig80843.16274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig80843.16274.1 >prot_S-dermatodea_contig80843.16274.1 ID=prot_S-dermatodea_contig80843.16274.1|Name=mRNA_S-dermatodea_contig80843.16274.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=51bp GGGSGKRYLILTYAAEFDRVHYPLPLARVELPAREKLERTIGRLGEVRWWback to top mRNA from alignment at S-dermatodea_contig80843:212..364+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig80843.16274.1 ID=mRNA_S-dermatodea_contig80843.16274.1|Name=mRNA_S-dermatodea_contig80843.16274.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=153bp|location=Sequence derived from alignment at S-dermatodea_contig80843:212..364+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig80843:212..364+ >mRNA_S-dermatodea_contig80843.16274.1 ID=mRNA_S-dermatodea_contig80843.16274.1|Name=mRNA_S-dermatodea_contig80843.16274.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=306bp|location=Sequence derived from alignment at S-dermatodea_contig80843:212..364+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |