mRNA_S-dermatodea_contig807.16258.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig807.16258.1
Unique NamemRNA_S-dermatodea_contig807.16258.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig807.16258.1 vs. uniprot
Match: D8LJ80_ECTSI (N-deacetylase/N-sulfotransferase (Heparan glucosaminyl) 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ80_ECTSI)

HSP 1 Score: 428 bits (1100), Expect = 9.200e-133
Identity = 214/348 (61.49%), Postives = 270/348 (77.59%), Query Frame = 2 
Query:    8 TRKEGGVPAMPVVAQGEEDVTVPSLIVIGARRSGSTSLFSMLGQHPNVVSIVPEV--DRSGGFMSQDLASYPHDAEWPGDRLETDIPADKLGSLLGEYARPFTSPETNEEGGAHMHKLVTAELSPGYLSSPLAPYRLKVSMPDVKIVVVLRDPVDRYFSELRQKLCVPNDKDIDWEDVNSSFAMPNSSKNYMSEAVLDFSPYDKRCLGEGASAEDLWECQQAARRSHRPLLEGLYAGQIARWQRVFDKSQIKVVSSNMLFAEPEKIAADVAKFAGLE-KHTFFEFAVDRESSCDPRRRGST-ISTAYSKRKEAEPNFRKWYADHNDMLTELVDMEMGWNDRIKSMNVN 1039
            +R E G  AMPVV    + VT+PS+I++GARRSG+++LFSML QHP V S+ PE   + S GFM+QD  ++P +AEWPGD LE ++PA  LG LL E+ARP+T  E+  EG      LVT  +SPGY +S LAPYRLK++MPDVKIVVVLRDP +RY+SELR+ LC     ++DWED+ SS+AMP +SK+Y+S+AVLD+SPYDKRCLGEGASA DLW CQ+   +SH PLL+GLYA Q+ RWQR F +SQ+ VV +  LF EPEK AA+VAKFAGL  +HTFFEFAVDRE+SCDPRR+ +  + TAYSKRKE+EP  RKWYA+HNDM++EL+  EMGWNDRI+S  V+
Sbjct:  139 SRAEDGPAAMPVVPLDGKHVTLPSVIIVGARRSGTSTLFSMLSQHPAVGSMAPEPRPELSCGFMAQDPETFPQEAEWPGDNLEKELPASVLGKLLEEFARPYTVSESRHEG-VDAPNLVTTAVSPGYFASHLAPYRLKLAMPDVKIVVVLRDPTNRYYSELREALCAD---EVDWEDIMSSYAMPAASKDYLSDAVLDYSPYDKRCLGEGASAADLWACQKGLEKSHTPLLKGLYAPQLERWQRAFGESQVLVVQAEKLFQEPEKTAAEVAKFAGLAAEHTFFEFAVDREASCDPRRKKNPEVVTAYSKRKESEPQLRKWYAEHNDMVSELLGEEMGWNDRIRSAFVS 482
[Close]
BLAST of mRNA_S-dermatodea_contig807.16258.1 vs. uniprot
Match: A0A6H5JNJ8_9PHAE (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNJ8_9PHAE)

HSP 1 Score: 377 bits (968), Expect = 5.120e-115
Identity = 210/402 (52.24%), Postives = 267/402 (66.42%), Query Frame = -1 
Query: 3088 SAVCDKVWKELRKLRE--VPPLESPQDTYK--------YTDYQAYTACNEVRNLLGPCSELPRDEFLAVFAGLVAGPRMEELLGLFRSSQS--HPALRYACLLALHGAAELSEERELMVSHAELPSALLSAMASPQKQLITPETAGASGAQEVNTAAGAITTIAGLFSSNSTLEPKYAELWVGLGAVSALVSSLEGHAAFDRTVPVTGDLPLCFLLVSTSLLAGAADAVSEEDKIRLGTAWLQLFVDARSWIAQEAGDHLADFYVRPNWLNGVVDQIPTEARQRAVEAARKSEAEGT------WKSGRADHLATAL-----------GLALGRRCAGPGCVK---------------------DGV-----KRCSRCQGVRYCSMECQAGHWRKGHRKACTS 4128
            S    K+W+ELRKLR+   PP+++   + K        Y D+ A+ ACNEVR  +G  S LPRD+FLA+F  LVAGPR++ELL LF+ S+S  HPAL+YACL+ALHG AELS+ R+ +++  ++   L + MASP+++L+TP +AGA G + VN AAGA+TTI GLF+SN  LEP YA+LWV LGAVSAL S LE HA FDR+ PV+GDLPLCF L++TSLLAGAAD+VSEEDK+RLG AWL +F++A  WIA EA D LADFY RPNWL  +V+++P + R  AV AAR+ E EGT      WK G+AD LA AL           G  +GRRCAGP C +                     DG      KRCS+C  V YCS ECQ   W+K HRKAC++
Sbjct:    5 STSSSKIWQELRKLRDDIPPPVDNNTGSNKGDQESSTCYKDFAAFAACNEVRVAIGRSSALPRDQFLAIFRQLVAGPRLDELLELFKFSRSPPHPALQYACLVALHGVAELSDRRKDLLTRPDVVKELCAVMASPRQRLVTPTSAGAGGVEIVNAAAGAVTTITGLFTSNGPLEPPYAKLWVELGAVSALASCLENHAVFDRSNPVSGDLPLCFFLIATSLLAGAADSVSEEDKLRLGKAWLTVFLEATRWIADEAADLLADFYTRPNWLKNIVERMPEKLRASAVAAARECEREGTGSGSSPWKGGKADRLALALLCGNAYNWDAGGELVGRRCAGPRCDRVQKCGHGGGNPHPAASEDEGGDGAASVAFKRCSQCHAVGYCSRECQKAGWKK-HRKACSA 405
[Close]
BLAST of mRNA_S-dermatodea_contig807.16258.1 vs. uniprot
Match: A0A6H5K695_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K695_9PHAE)

HSP 1 Score: 370 bits (949), Expect = 4.850e-114
Identity = 177/277 (63.90%), Postives = 219/277 (79.06%), Query Frame = 2 
Query:  212 YPHDAEWPGDRLETDIPADKLGSLLGEYARPFTSPETNEEGGAHMHKLVTAELSPGYLSSPLAPYRLKVSMPDVKIVVVLRDPVDRYFSELRQKLCVPNDKDIDWEDVNSSFAMPNSSKNYMSEAVLDFSPYDKRCLGEGASAEDLWECQQAARRSHRPLLEGLYAGQIARWQRVFDKSQIKVVSSNMLFAEPEKIAADVAKFAGLE-KHTFFEFAVDRESSCDPRRRGSTISTAYSKRKEAEPNFRKWYADHNDMLTELVDMEMGWNDRIKSMNVN 1039
            +PHDAEWPGD LE ++PA  LG LL E+ARP+T  E+ +EG      LVT  +SPGY SS LAPYRLK+++PDVK+VVVLRDP DRY+SELR+ LC     ++DWED+ SSFAMP + K Y+S+AVLD+SPYDKRCLGEGASA DLW CQ+   +SH PLL+GLYA Q+ RWQR F +SQ+ VV +  LF EPEK AA+VAKFAGL  +H+FFEFAVDRE+SCDPRR+   + TAYSKRKE+EP  RKWYA+HND+++EL+  EMGWNDRI+S  V+
Sbjct:   16 FPHDAEWPGDNLEKELPASVLGKLLEEFARPYTVSESRQEG-IDGPILVTTAVSPGYFSSHLAPYRLKLAIPDVKVVVVLRDPTDRYYSELREALCAD---EVDWEDIMSSFAMPGACKGYLSDAVLDYSPYDKRCLGEGASAADLWACQKGLEKSHTPLLKGLYAAQLDRWQRAFGESQVLVVQAEKLFQEPEKTAAEVAKFAGLAAEHSFFEFAVDREASCDPRRKNPEVVTAYSKRKESEPQLRKWYAEHNDIVSELLGEEMGWNDRIRSALVS 288
[Close]
BLAST of mRNA_S-dermatodea_contig807.16258.1 vs. uniprot
Match: D7G9G8_ECTSI (Putative deacetylase sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G8_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 1.070e-46
Identity = 110/283 (38.87%), Postives = 160/283 (56.54%), Query Frame = 2 
Query:   35 MPVVAQ-GEEDV-TVPSLIVIGARRSGSTSLFSMLGQHPNVVSIVPEVDRSGGFMSQDLASYPHDAEWPGDRLETDIPADKLGSLLGEYAR-------PFTSPETNEEGGAHMHKLVTAELSPGYLSSPLAPYRLKVSMPDVKIVVVLRDPVDRYFSELRQKLCV----PNDKDIDWEDVNSSFAMPNSSKNYMSEAVLDFSPYDKRCLGEGASAEDLWECQQAARRSHRPLLEGLYAGQIARWQRVFDKSQIKVVSSNMLFAEPEKIAADVAKFAGLEKHTF 844
            +P+VA  GE  + ++P + +IG ++ G+T+L   L  HP V  +  EV     F  QD   YP    W GD  E ++    +G +L EYA+       P   P  ++   A M   V  E SP Y+ SP+APYR+++ +P  K+VVVLRDP DRYFS+LR  +C     P    ++ E +++ F  P  +K Y+  A   ++PY +RC GE A++ DLW C +A   +H PL  GLYA Q+ RW RV+DKSQI V+ S  +F    +  A VA++AGL +H F
Sbjct:  118 LPLVAPIGERSLLSIPLITIIGVQKGGTTNLRRNLLTHPLVTGMPNEVH----FFDQDPDIYPKLGHWQGDGREKELSPGAIGRILSEYAKTCLEEGKPKKKPAWHKNVAA-MSSGVIVESSPRYILSPIAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLE-EQISTHFHPPGQAKGYIKRAEAAYNPYGERCRGENATSADLWNCFKAMA-THNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAVVAEWAGLPEHEF 393
[Close]
BLAST of mRNA_S-dermatodea_contig807.16258.1 vs. uniprot
Match: D7G3W4_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W4_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 1.750e-35
Identity = 90/233 (38.63%), Postives = 120/233 (51.50%), Query Frame = 2 
Query:  347 HKLVTAELSPGYLSSPLAPYRLKVSMPDVKIVVVLRDPVDRYFSELRQKLCVPNDKDIDWEDVNSS----FAMPNSSKNYMSEAVLDFSPYDKRCLGEGASAEDLWECQQAARRSHRPLLEGLYAGQIARWQRVFDKSQIKVVSSNMLFAEPEKIAADVAKFAGLEKHTFFEFAVDRESS--CDPRRRGSTIST-----AYSKRKEAEPNFRKWYADHNDMLTELVDMEMGWN 1012
            H  VT E SP Y+ +PLAPYR+ +  P  ++V+VLRDP DRYFS+LR  +C        +E V  +    F  P  +  Y+      + PY   C GE A+ EDL +C +A +  H PLL GLYA Q+ RW RVFDKSQI +V S  +  +   + ADVA   GL    F      + S+  C    RG           Y K  E E  FR+WY  HN+ L +L+   M W+
Sbjct:    9 HGKVTVESSPRYIFNPLAPYRMGMVQPFARLVLVLRDPTDRYFSQLRMTMCSGKTNQT-FERVQENQATWFHSPGDAAGYIDGGEATYEPYTPLCRGENATTEDLRDCYRA-QLPHHPLLRGLYADQLERWFRVFDKSQILIVDSANMMEDLPGVLADVAAHIGLPGSDFDSDRPVQHSTGLCPALGRGEDPDFFGEEGRYDKMLEEEDLFREWYRPHNERLFKLLGRSMMWD 239
[Close]
BLAST of mRNA_S-dermatodea_contig807.16258.1 vs. uniprot
Match: D7FST9_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST9_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 1.260e-31
Identity = 94/273 (34.43%), Postives = 139/273 (50.92%), Query Frame = 2 
Query:   56 EEDVTVPSLIVIGARRSGSTSLFSMLGQHPNVVSIVPEVDRSGGFMSQDLASYPHDA-----EWPGD-RLETDIPADKLGSLLGEYA-RPFTSPETNEEGGAHMHKLVTAELSPGYLSSPLAPYRLKVSMPDVKIVVVLRDPVDRYFSELRQKLCVPNDK---DIDWEDVNSSFAMPNSSKNYMSEAVLDFSPYDKRCLGEGASAEDLWECQQAARRSHRPLLEGLYAGQIARWQRVFDKSQIKVVSSNMLFAEPEKIAADVAKFAGLEKHTF 844
            E   ++P  I+IG ++ G+ +L S L  HP++  +     +   F   D   +P D      EWPGD R    +     G +L  YA R   + + ++        + T E SP YL  PLAPYR+++ +P  ++V++LRDP +RYFS LR  +C   D    D   E + + F +P   K Y+ +    + PY   C GEGA A+DL  C +A   +H PL  GLY  Q+ RW RV+ +SQI VV S+ +F +       VA+  GL  H F
Sbjct:  268 EASRSIPLAIIIGTQKGGTQNLRSHLLTHPSLSGLR---QKEAHFF--DWFWFPSDPNKKRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAVDPSKRD-----TMATVESSPLYLFFPLAPYRMRMVLPAARLVLILRDPTERYFSHLRMMMCGTRDGETFDQLEERLETYFHIPGRVKEYLEQGEASYKPYTPLCRGEGARAKDLLRCWKAMV-THDPLHRGLYVDQLERWLRVYPRSQILVVESSEMFGDFTGTLNQVARHIGLPPHDF 529
[Close]
BLAST of mRNA_S-dermatodea_contig807.16258.1 vs. uniprot
Match: A0A6H5JDR2_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR2_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 9.300e-31
Identity = 105/331 (31.72%), Postives = 155/331 (46.83%), Query Frame = 2 
Query:   56 EEDVTVPSLIVIGARRS---GSTSLFSMLGQHPNVVSI-VPEVDRSGGFMSQDLASYPHDAEWPGD-RLETDIPADKLGSLLGEYA-RPFTSPETNEEGGAHMHKLVTAELSPGYLSSPLAPYRLKVSMPDVKIVVVLRDPVDRYFSELRQKLCVPNDKD-IDWEDVNSS--FAMPNSSKNYMSEAVLDFSPYDKRCLGEGASAEDLWECQQAARRSHRPLLEGLYAGQIARWQRVFDKSQIKVVSSNMLFAEPEKIAADVAKFAGLEKHTFFEFAVDRESSCDPRRRGSTISTA----YSKRKEAEPNFRKWYADHNDMLTELVDMEMGW 1009
            E   ++P  I+IG + S   G+ +L S L  HP++  +   E      F         H  EW GD R    + +   G +L  YA R   + +  +        + T E +P Y   PLAPYR+K+ +P  ++V++LRDP +RYFS LR  +C   D +  D  +      F +P   K Y+      + PY   C GE A A+DL  C +A   +H PL  GLYA Q+ RW RV+ +SQI V+ S+ +F         VA+  GL  H + E+    + +  P  R      A    Y K  E +   ++WY  HN+ L  L+  EM W
Sbjct:  210 EASRSIPLAIIIGTQASAKGGTQNLRSHLLTHPSLSGLRQKEAHFFDWFWFTSDPKSRH--EWRGDGRGGAGLNSSAAGEVLSAYADRAMEAVDPRKRD-----TMATVESTPLYFFYPLAPYRMKMVLPAARLVLILRDPTERYFSHLRMMMCWTRDSETFDHLEKRQKTYFHIPGRVKEYLERGEASYKPYTPLCRGEEARAKDLLRCWKAMV-THDPLHRGLYADQLERWFRVYPRSQILVLESSEMFGNFTGTLDKVARHIGLPPHGY-EYDSRHQHASAPCERNHPELFAEGGRYQKMLEDQRVLQEWYRPHNERLYRLLGREMPW 531
[Close]
BLAST of mRNA_S-dermatodea_contig807.16258.1 vs. uniprot
Match: A0A6H5KC11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC11_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.380e-26
Identity = 63/135 (46.67%), Postives = 82/135 (60.74%), Query Frame = 2 
Query:  356 VTAELSPGYLSSPLAPYRLKVSMPDVKIVVVLRDPVDRYFSELRQKLCVPNDKDIDWEDVNSS--FAMPNSSKNYMSEAVLDFSPYDKRCLGEGASAEDLWECQQAARRSHRPLLEGLYAGQIARWQRVFDKSQI 754
            VT E SP Y+ +PLAPYR+ +  P  ++V+VLRDP DRYFS+LR  +C        +E V  +  F  P  +  Y+  A   + PY   C GE A+A DL +C +A RR H PL  GLYA Q+ RW RVFDKSQ+
Sbjct:   12 VTVESSPTYIFNPLAPYRMGMVQPFARLVLVLRDPTDRYFSQLRMTMCSGKANQT-FEGVKEAAWFHSPGDAAGYIDGAEATYEPYTPLCRGEKATAMDLRKCSRAQRR-HHPLFRGLYADQLERWFRVFDKSQV 144
[Close]
BLAST of mRNA_S-dermatodea_contig807.16258.1 vs. uniprot
Match: UPI001ADC3670 (sulfotransferase domain-containing protein n=1 Tax=Alkalihalobacillus sp. BA299 TaxID=2815938 RepID=UPI001ADC3670)

HSP 1 Score: 92.4 bits (228), Expect = 5.910e-17
Identity = 73/316 (23.10%), Postives = 126/316 (39.87%), Query Frame = 2 
Query:   71 VPSLIVIGARRSGSTSLFSMLGQHPNVVSIVPEVDRSGGFMSQDLASYPHDAEWPGDRLETDIPADKLGSLLGEYARPFTSPETNEEGGAHMHKLVTAELSPGYLSSPLAPYRLKVSMPDVKIVVVLRDPVDRYFSELRQKLCVPNDKDIDWEDVNSSFAMPNSSKNYMSEAVLDFSPYDKRCLGEGASAEDLWECQQAARRSHRPLLEGLYAGQIARWQRVFDKSQIKVVSSNMLFAEPEKIAADVAKFAGLEKHTFFEFAVDRESSCDPRRRGSTISTAYSKRK-EAEPNFRKWYADHNDMLTELVDMEMGWND 1015
            +P  ++IGA++ G+TS ++ L +HPN+                           PG   E     +     L  Y   F S  + E+       ++T E +P Y+  PL P R+   MP VK++ +LR+P+DR +S+ +  L       +     N SF+     +  + +A   +                              L  G+Y  QI RW + F + Q+KVV S  LF+ P K+  +V  F GL  +   E+              +  S +Y + + E      ++Y  +N  L E++  + GW++
Sbjct:    5 MPDFLIIGAQKCGTTSFYNHLIEHPNIE--------------------------PGKNKEIHFFDNNYNKGLDWYISQFPSLSSTEK------YILTGEATPKYIFHPLVPKRVFSVMPQVKLIALLRNPIDRAYSQYQMALRRRQRLQLG----NRSFSFEEVIEKELKQAEFSY------------------------------LKRGVYVNQIERWLKFFPRMQLKVVKSEDLFSNPSKVYKEVISFLGLPSYELKEY-------------NNQNSASYQQMEIETRRRLIEYYKPYNKKLYEVLGQDFGWDN 241
[Close]
BLAST of mRNA_S-dermatodea_contig807.16258.1 vs. uniprot
Match: K9VKE3_9CYAN ((Heparan sulfate)-glucosamine 3-sulfotransferase 1 n=4 Tax=Oscillatoriales TaxID=1150 RepID=K9VKE3_9CYAN)

HSP 1 Score: 90.5 bits (223), Expect = 4.170e-16
Identity = 78/313 (24.92%), Postives = 121/313 (38.66%), Query Frame = 2 
Query:   74 PSLIVIGARRSGSTSLFSMLGQHPNVVSIVPEVDRSGGFMSQDLASYPHDAEWPGDRLETDIPADKLGSLLGEYARPFTSPETNEEGGAHMHKLVTAELSPGYLSSPLAPYRLKVSMPDVKIVVVLRDPVDRYFSELRQKLCVPNDKDIDWEDVNSSFAMPNSSKNYMSEAVLDFSPYDKRCLGEGASAEDLWECQQAARRSHRPLLEGLYAGQIARWQRVFDKSQIKVVSSNMLFAEPEKIAADVAKFAGLEKHTFFEFAVDRESSCDPRRRGSTISTAYSKRKEAEPNFRKWYADHNDMLTELVDMEMGWN 1012
            P  I+IGA++ G+TSL++ L QHP    I P   +   +   +    P   +W                    Y   F  P+T E        LVT E SP Y+  P  P R+    P VKI+ +LR+PV+R  S     +       I +E ++   A+ +  K    E              E   A+  +   +   + H  L  G+YA Q+  W ++F KSQ+ ++ S  L+         V +F  L  H    +     +   P        T Y +        R ++  HN  L EL D + GW+
Sbjct:   16 PDFIIIGAQKGGTTSLYNYLIQHPQ---IAPAAQKEIHYFDFNFDKSP---DW--------------------YCSQFPQPQTGEN-------LVTGEASPYYICHPQVPQRIHDLFPKVKIIALLRNPVERAISHYYYYI------KIGYESLSLESAIASEPKRLKGEI-------------EKLQADPNYYSYE--HQHHSYLTRGIYADQLPAWMKLFPKSQLLILKSEDLYTNTFGTYNSVLEFLELPPHQLQTYEKYNATEYPP-----ISDTVYEQ-------LRAYFRSHNQRLAELCDRDFGWD 262
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig807.16258.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ80_ECTSI9.200e-13361.49N-deacetylase/N-sulfotransferase (Heparan glucosam... [more]
A0A6H5JNJ8_9PHAE5.120e-11552.24MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5K695_9PHAE4.850e-11463.90Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
D7G9G8_ECTSI1.070e-4638.87Putative deacetylase sulfotransferase n=1 Tax=Ecto... [more]
D7G3W4_ECTSI1.750e-3538.63Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
D7FST9_ECTSI1.260e-3134.43Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6H5JDR2_9PHAE9.300e-3131.72Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
A0A6H5KC11_9PHAE1.380e-2646.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001ADC36705.910e-1723.10sulfotransferase domain-containing protein n=1 Tax... [more]
K9VKE3_9CYAN4.170e-1624.92(Heparan sulfate)-glucosamine 3-sulfotransferase 1... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig807contigS-dermatodea_contig807:15252..24890 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score423.7
Seed ortholog evalue8.1e-116
Seed eggNOG ortholog2880.D8LJ80
Preferred nameNDST1
KEGG koko:K02576,ko:K02577,ko:K02578,ko:K02579
KEGG Pathwayko00534,ko01100,map00534,map01100
KEGG ModuleM00059
GOsGO:0000003,GO:0000137,GO:0000139,GO:0000271,GO:0001501,GO:0001568,GO:0001667,GO:0001704,GO:0001707,GO:0001932,GO:0001934,GO:0001944,GO:0001990,GO:0001991,GO:0002002,GO:0002009,GO:0002165,GO:0003002,GO:0003008,GO:0003013,GO:0003044,GO:0003073,GO:0003081,GO:0003205,GO:0003279,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0005795,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006464,GO:0006476,GO:0006477,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007267,GO:0007275,GO:0007276,GO:0007283,GO:0007350,GO:0007365,GO:0007367,GO:0007369,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007424,GO:0007427,GO:0007444,GO:0007472,GO:0007474,GO:0007476,GO:0007498,GO:0007507,GO:0007509,GO:0007552,GO:0007560,GO:0007585,GO:0008015,GO:0008078,GO:0008146,GO:0008150,GO:0008152,GO:0008194,GO:0008217,GO:0008375,GO:0008543,GO:0008587,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009653,GO:0009719,GO:0009790,GO:0009791,GO:0009792,GO:0009880,GO:0009886,GO:0009887,GO:0009888,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010562,GO:0010604,GO:0010631,GO:0010646,GO:0010647,GO:0010817,GO:0012505,GO:0015012,GO:0015014,GO:0015016,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016055,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0016782,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019220,GO:0019222,GO:0019538,GO:0019953,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030166,GO:0030201,GO:0030203,GO:0030900,GO:0030901,GO:0031090,GO:0031224,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031984,GO:0031985,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0033692,GO:0034483,GO:0034637,GO:0034645,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035282,GO:0035295,GO:0035601,GO:0035904,GO:0036211,GO:0036465,GO:0040008,GO:0040011,GO:0042074,GO:0042221,GO:0042325,GO:0042327,GO:0042328,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043408,GO:0043410,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044344,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045570,GO:0045880,GO:0045937,GO:0046620,GO:0048232,GO:0048311,GO:0048312,GO:0048332,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048562,GO:0048563,GO:0048568,GO:0048569,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048638,GO:0048646,GO:0048701,GO:0048702,GO:0048703,GO:0048704,GO:0048705,GO:0048706,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048870,GO:0050119,GO:0050789,GO:0050793,GO:0050794,GO:0050886,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0051923,GO:0060255,GO:0060322,GO:0060429,GO:0060541,GO:0060562,GO:0060840,GO:0060976,GO:0065007,GO:0065008,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071704,GO:0071774,GO:0071840,GO:0072358,GO:0072359,GO:0080090,GO:0090130,GO:0090132,GO:0098588,GO:0098657,GO:0098732,GO:0098791,GO:0099003,GO:0099504,GO:0198738,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902531,GO:1902533,GO:1904888,GO:1905114,GO:2000026
EggNOG free text desc.[heparan sulfate]-glucosamine N-sulfotransferase activity
EggNOG OGsKOG3703@2759,KOG3704@1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-02_005090.1
Exons10
Model size4305
Cds size1017
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig807.16258.1prot_S-dermatodea_contig807.16258.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig807 18989..24856 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925317.857864-UTR-S-dermatodea_contig807:15251..153921622925317.857864-UTR-S-dermatodea_contig807:15251..15392Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig807 15252..15392 -
1694079851.2437751-UTR-S-dermatodea_contig807:15251..153921694079851.2437751-UTR-S-dermatodea_contig807:15251..15392Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig807 15252..15392 -
1622925317.8732014-UTR-S-dermatodea_contig807:15608..157621622925317.8732014-UTR-S-dermatodea_contig807:15608..15762Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig807 15609..15762 -
1694079851.2611034-UTR-S-dermatodea_contig807:15608..157621694079851.2611034-UTR-S-dermatodea_contig807:15608..15762Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig807 15609..15762 -
1622925317.8841748-UTR-S-dermatodea_contig807:16029..189881622925317.8841748-UTR-S-dermatodea_contig807:16029..18988Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig807 16030..18988 -
1694079851.2700145-UTR-S-dermatodea_contig807:16029..189881694079851.2700145-UTR-S-dermatodea_contig807:16029..18988Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig807 16030..18988 -
1622925317.988397-UTR-S-dermatodea_contig807:24856..248901622925317.988397-UTR-S-dermatodea_contig807:24856..24890Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig807 24857..24890 -
1694079851.367796-UTR-S-dermatodea_contig807:24856..248901694079851.367796-UTR-S-dermatodea_contig807:24856..24890Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig807 24857..24890 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925317.894948-CDS-S-dermatodea_contig807:18988..191751622925317.894948-CDS-S-dermatodea_contig807:18988..19175Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig807 18989..19175 -
1694079851.2781646-CDS-S-dermatodea_contig807:18988..191751694079851.2781646-CDS-S-dermatodea_contig807:18988..19175Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig807 18989..19175 -
1622925317.904694-CDS-S-dermatodea_contig807:19597..197101622925317.904694-CDS-S-dermatodea_contig807:19597..19710Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig807 19598..19710 -
1694079851.2862377-CDS-S-dermatodea_contig807:19597..197101694079851.2862377-CDS-S-dermatodea_contig807:19597..19710Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig807 19598..19710 -
1622925317.9159873-CDS-S-dermatodea_contig807:19919..200871622925317.9159873-CDS-S-dermatodea_contig807:19919..20087Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig807 19920..20087 -
1694079851.2950065-CDS-S-dermatodea_contig807:19919..200871694079851.2950065-CDS-S-dermatodea_contig807:19919..20087Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig807 19920..20087 -
1622925317.9287603-CDS-S-dermatodea_contig807:21279..213941622925317.9287603-CDS-S-dermatodea_contig807:21279..21394Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig807 21280..21394 -
1694079851.3055482-CDS-S-dermatodea_contig807:21279..213941694079851.3055482-CDS-S-dermatodea_contig807:21279..21394Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig807 21280..21394 -
1622925317.9424593-CDS-S-dermatodea_contig807:22921..230371622925317.9424593-CDS-S-dermatodea_contig807:22921..23037Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig807 22922..23037 -
1694079851.3160434-CDS-S-dermatodea_contig807:22921..230371694079851.3160434-CDS-S-dermatodea_contig807:22921..23037Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig807 22922..23037 -
1622925317.9541361-CDS-S-dermatodea_contig807:23835..239771622925317.9541361-CDS-S-dermatodea_contig807:23835..23977Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig807 23836..23977 -
1694079851.3273323-CDS-S-dermatodea_contig807:23835..239771694079851.3273323-CDS-S-dermatodea_contig807:23835..23977Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig807 23836..23977 -
1622925317.9658437-CDS-S-dermatodea_contig807:24366..244761622925317.9658437-CDS-S-dermatodea_contig807:24366..24476Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig807 24367..24476 -
1694079851.3435874-CDS-S-dermatodea_contig807:24366..244761694079851.3435874-CDS-S-dermatodea_contig807:24366..24476Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig807 24367..24476 -
1622925317.977444-CDS-S-dermatodea_contig807:24790..248561622925317.977444-CDS-S-dermatodea_contig807:24790..24856Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig807 24791..24856 -
1694079851.3566103-CDS-S-dermatodea_contig807:24790..248561694079851.3566103-CDS-S-dermatodea_contig807:24790..24856Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig807 24791..24856 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig807.16258.1

>prot_S-dermatodea_contig807.16258.1 ID=prot_S-dermatodea_contig807.16258.1|Name=mRNA_S-dermatodea_contig807.16258.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=339bp
MPVVAQGEEDVTVPSLIVIGARRSGSTSLFSMLGQHPNVVSIVPEVDRSG
GFMSQDLASYPHDAEWPGDRLETDIPADKLGSLLGEYARPFTSPETNEEG
GAHMHKLVTAELSPGYLSSPLAPYRLKVSMPDVKIVVVLRDPVDRYFSEL
RQKLCVPNDKDIDWEDVNSSFAMPNSSKNYMSEAVLDFSPYDKRCLGEGA
SAEDLWECQQAARRSHRPLLEGLYAGQIARWQRVFDKSQIKVVSSNMLFA
EPEKIAADVAKFAGLEKHTFFEFAVDRESSCDPRRRGSTISTAYSKRKEA
EPNFRKWYADHNDMLTELVDMEMGWNDRIKSMNVNGGL*
back to top

mRNA from alignment at S-dermatodea_contig807:15252..24890-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig807.16258.1 ID=mRNA_S-dermatodea_contig807.16258.1|Name=mRNA_S-dermatodea_contig807.16258.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=9639bp|location=Sequence derived from alignment at S-dermatodea_contig807:15252..24890- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGACGCAACGCGAAAAGAAGGAGGCGTGCCGGCAATGCCCGTCGTTGCGC
AAGGAGAGGAAGACGTCACCGTTCCCTCCTTGATTGTCATCGGGGCGCGA
GTGAGTTCCTGCAATAGACGAGCGTTCAATTATGTGATACGGAAGCTACT
GCTGTATGCTTGTACCACCACTGATTTGTTAAAGAATTTGTGGCATGATT
TTCGGTGCATGTGATAACCTTTCTGGCAGGTAGTACTGTACAGGTTCGTG
ACTATCGCACGGAAGCTCGTGCTTACTGCGTTTCTACTATGCATGTGCCC
CTTGCTCCTCTCATTGCTCGGCGCGTGACCATACCTACTATATACACGTG
TTGCGCGAAGCCCCACCCGTTTTTCTCTCTCGGCTGTTACGGTGGCTGCC
TTTTTTTTTTTCAGAGGTCCGGGTCGACATCGCTGTTCAGCATGCTCGGC
CAGCACCCCAACGTTGTCTCGATCGTACCCGAAGTTGACCGTTCCGGTGG
ATTCATGTCGCAGGATCTGGCAAGGTGAGACGCGTATGATTCAGTTGTAC
TGGTACTCGCTTTCCATCGTCACAGCAGCCAGAATACCCTAAGCACAAAT
GCCTTAAGATGGCAAACTTCACGGCGGCTGGTTTTCTCGGCGCCCTGCCC
GCAGTTTTGTCCAGATCGCTCCTGTAGGCGAACAACTCTTCGTCGGGTTG
CGCAAAATGCTATTTTCAACCTCAAATCACCTCTAGAAGACGCAAGAGAG
ACATCGCACGAACTGTATCGCCTTCACTGGGTACACAGCTGGGCCCACCT
TACGTCCAATTCCCAAAATGCCAAGAGCTCGATTTCCAGAAAAAAACGTC
ATTATATATTGTACCTGGCATGCCTCTTAGGAAAAAGCGCTGTGCCGTAT
CTGTCGCCTGCAGTTACCCACACGATGCCGAGTGGCCTGGCGACAGGTTA
GAGACGGACATCCCCGCCGACAAGCTGGGGAGTCTTTTGGGCGAGTACGC
GCGTCCCTTCACCTCTCCCGAGACGAACGAGGAGGGGGGTGCTCACATGC
ACAAGGTATGTACGGGACGGTTGGGTGGGTGGGCAAGGAATGGATGTGAC
AAAGCAAAAAATAAGGTCGCCCGGCTGGCGAGAAGCAAACCCGTTTGGCG
CTACGACACAGGGTAGCCGGCGCGAGCCTACGAGCACACGCTCTCAAGTG
TTTTTGCTGTGGTTGCTGCACTGTCAAACCATCATGTCGTGGCGCGAAAT
TGAGTCTCGACAGTTGTCTTACGAGCGTGTGTTTGGCGATGACGTGGGAA
TTATTTGTCTTACCTGTCCGGTAGCTTGCCGAGTACAAGAAAGCCTGACA
GATGAAATATATCTACAGTGTCACGCGTTGTGTCAACATTTTTTTGGCGA
AGTTTTGTGTCGATCGATGACGCAGAAGTGGCCGTCAACCCATGAAACCC
GCAAGCGTGGTTGGTCTATAGCCCGCCAAAAACAAAATACGTGAAAATGA
TAAGGAACATATAGCATAGTTTCGAGCGTCCTCTCTGTGGTCCAAGGCAA
CCCAGGCTGTCCCAGGCCATACTGGTCCAACCATTGAAGAACAAACGGCA
CAGAACGGCTCGTCATTTGACCTCCAACTTGTAGACATGAAATTGTTGTT
TGACTGCATGGCGACGGTTTAACTTGTTTGTTCGATTCGGACGCCTGACG
CCTGACGCTGAACGATGTTACTCCGGGGTCCTTCGGACACCCGCCCCAGG
CTTGCCGAGGTGTTGACCATACTACCGTACGGCCTCCTCCGGGGTCCTTT
TATGTCCGCCTTTCGCGTATTTCGCCCCCCCTTCCGTTATGCTCGACGCA
CAGCTCGTTACGGCGGAGCTCAGCCCTGGATACCTTTCTTCTCCGTTGGC
ACCTTACCGACTGAAGGTCTCCATGCCAGACGTGAAGATTGTTGTGGTGC
TGCGGGACCCTGTAGATAGGTGAGCAAAAGAGGAGAAATTTCTTGCTGCT
GATGTACAACAGCAGTACAACAGCAGCAGTACTCTCGGGCCGGTTCCTCT
TGTTTTTTTGTTTTTTTTGCAATGTGATATTGTAGTTGCGTCCCGTGTGG
AGTCAAAAGCTGCGGCGTTGTTCCGTGTTGCTGGTTTTGATAATTACTAC
AGTAACGGGCCAATTGTTGAGCAATAATAAACTGGCTGCCTTTGTTCCGA
CGTTCATCCTATCCCCCCCCCGCTGCTTTGCCCTTTATTCCGATCGTGCA
CTTGCACTGCCCTCAACTATCGTGCACTGCCTCAACTCGTCGATTGCCAT
CAGAATTGTTTGAAGTCGTGTTCGTACCATACAACTTTCGCCGTTCGTCA
TGTCCCCACGCACTACAACAGTTTTAGTTGAGATAGGCATGTCGACTACA
AACGTGCTATTACTATTTTAAAACGAAACGTGTAGGTCGCCGTCCTTCCT
CGAGAGTGTTTTTTAAGGGTGTAGAGTGGAGAAAAAAGTCACATATGCAC
AATTGTCAACCATCTGGAAAAATGGTGGAAATAGTTTGAATCCCACGCCC
TCTGCAAGGAAAAGCACATTACATCCAGTATAAACAATGTCAAGAAACCG
AGGTGCGGTATCGTAAAATTCGCTTTTGGAGGTTTTCACCTCACTAGACT
CTAAGCGATATATAGCTTCATTGGTTCGTTGCTTACCTTTCGTATTCAGA
TCGCGAACGTACTTGAGCCGCGCGTAGCGGTCGATTTGCCCATCTAAATT
AGGCGATTTGTTAACAAATCGCCTGCTTTAGATGGTTAAATCGAGGGCAA
CGCGCGGTGCAATTACATTCACGATCTGAAAAAGAAAAAGGAACATACTG
TAGATAACGAACCAACGAAGCCGTAATTCGCTTAGTGTCTAGTGGGGTAA
CATCCCCCAGAAGCGAATTTTCGTTTTCTTGACATTATTTATTATTTATA
CTGGATTTAATATCCTGTTCCTTGCAGAGGGCGTGGGATACCAATATTTC
ACCGTTTTTTCAGATGGTTGACAAATGTGCATATGCGAATTTGTTCTCCA
CCCTACACCCTTAGAGCTCTAAGCAACTATGTGTCGCCTCTAGTGGGTCC
CGGACTTGCCCGCATTTTGGCATGTACTGCCTGCGAATGCACCAGTGTCT
TTCCTCGCAGTATCTTTGGACTGATGGGCCTGCAGGTTCGCAGGCCCAAC
ACTCGACCGGTTCGCGTTACTGTAACCGCGGGGCCGTTGCAGTTTGAGAT
TGGAGCTGCTTGCGTTCGCGTTCTGTTGGCTGGATGGATGTGCCATGGTT
TGTGTGCATAGCACCCAGGATGCCGCCATCGCAACGCCGCGTCGTGCACT
GTCTGTATACCAACGATGTACCGATGCACTATCAAATGTAACACTGCTGT
AGACACATTAGTCGTGTTCGGGCGACCATGGCGACGTCATCAAAACGGGA
TTCGTCTGGCGTGCTGTCTGCATACCGTACCGAACCCTCCGTGTAGGTAT
TTCTCTGAGCTGCGACAGAAGCTATGCGTGCCCAACGACAAAGATATTGA
CTGGGAGGACGTCAATTCCTCATTCGCCATGCCCAACTCCAGCAAGAACT
ATATGTCGGAGGTGAGGGAAGCCATCGGCACAAAAACGTGGCTTAGAGTG
CCATATGTGCTACAAGCATGCAAGCATTCATTACTGTTATATTATAGTTG
TGCGGGGAAGGATTCTACTATTGTGACACTGCTGTTGCAGAGCATTGCGC
AATAGCTTCTCTTTTCAAGACGCACCCATGTGGGGATACCACGCTGCTGA
CCGCGCAGAGGCCAAAAGGCGTGGTGACTGCGCGGATCTAAGGAATCAGC
ATTGGCGTCTGGGTACTATACCCTAATACTTGTATTATGTTCGGTGTCGC
ACACGACGAAGATGATTTTTTTACCCTCTCTGCCTCCCCCGTTAAACTAA
AACCTATATTGCCTTTGAGGTTCGAGGTGGGGTTGGTCGAGGTAGGGTTG
GCTATTATGGCATGGGGTTAAAAAAAGTGGTGTTCGTAGGACATGGGGGA
GTTCTTTCTGTGTGCCCTGTGAGCTCATAGATCTCGGGTCGAAGAATCTT
GTTTCTCCCCGAGGGGGGTGAAAACTCACACACCACATAATATCTGCTGA
AGAATGTTTTGTTGGAACGCCATGTATCAACCATTAACGTATGATCGGCC
CCCGTCCAAGGGTACTCATACAACACAATACTGGATATTATAGTCTTGAG
AGTATCGCACATAAATACCGTGGTGTTGTATGCGGCGCTTTCGCTTTGGC
GTTCGCAACGTTTGGGTCTCTGAACGTGCAACGTTTGGGTGCCCGGTGTG
TCCTATCAACACATGGCATGTCCGGTTTGGCATCGCAAACGCAAGGATGA
TTACTAACAGCTGATATGATCCTCGCAAAACGCAGCCTGGCCGGCGAAAC
CCCGGCTTATCGCTTAGTCCCGGCATTTTGTTGGGATTCGTGGTGTGTGT
CCGTTTGGATATGATACGGCTTCCGACCAACCACCCGGCCGTTTCCATGC
ACAACTGCAGTAATGCCATCCTACAATATCCGCTCGCTGTCGCATGAGAA
ATCGAGAGAAAACGAATCATGGAATTACGGTACCTAGATACTTGTATATT
GCGAGCTCGTGAATACCCCTACTTACCCGTTTCTTTCGAAAATGAGAGAA
AACCAGCTGAGGCCGCTGAAGCATAGCTAAAATAGCGTTGGTCCCAACCC
ACACATATACCCCCCAATGTTCCCTCTCTGCACCATATGGCCCGCTCCGT
TAGGCGGTATTGGATTTCTCCCCGTATGACAAGCGTTGCCTGGGAGAGGG
GGCCTCTGCCGAAGACTTGTGGGAGTGCCAACAAGCGGCGAGGCGAAGCC
ACCGGCCGCTTCTGGAAGGGCTGTACGCTGGACAGATCGCGAGGTGGCAA
CGAGTTTTCGACAAATCGCAGGTGCGGCCCCTGCAGGATGACGTATTCCA
GACCGTGACGGCGCCGAACTACGTTATTACCAGGAAAGGAGACAACGCGC
CCATACCGTTACCGTCGGCGTTCGTAATCCTTGTGAATGGGCAGCCTACG
CATGATGCCGCAGAATCCCGCGAGGTATGCTGTGTACTTGACTTACGATA
TCTTCCGCCGTTTGCTGTTTCACACCTCAGATTAAAGTGGTGAGCTCGAA
CATGCTCTTCGCGGAACCTGAGAAGATCGCAGCCGACGTGGCCAAGTTTG
CGGGGTTGGAGAAGCACACGTTTTTCGAGTTCGCCGTGGACAGGTGACGT
TGTTTGGCGTGCGTGCGAATGGGGAGGACGGAGGTAGGCGGGGGGAGCTG
ATGTTCAACTATTTCGCCGATGTAAATATAAAGGGAAACGCCTCCGCGGA
AGTGTCATACATTTTTTTACATTTTTTACATACACATGATAGACAGGCTT
TTCCGAGGTCCGTCTGTGGTCACAAGGGATCATCCCATCTCTCCTATCCC
CGGTTCTCACCTTTGATTTTTATCGCGCAGTGGGTTCGGCACTCCGGCAG
CTCGCCGATTTATCGGATTTTGCTTACTCACAGAGGACGAGTATCCAAAC
CGTCTGTCTTATTTTTCGCGCGTTTCGCTTCAAAGCGATAGAAATGCTAT
ATATCGTGAAAAAACGCGACGTCATGTTCAAGCATCCCCATGCCCCCTTC
GAAATCGAAATGCAGGGAGTCCTCGTGCGACCCTCGACGTCGAGGTTCCA
CCATCTCCACGGCGTACTCGAAGCGCAAGGAGGCGGAGCCTAACTTCCGC
AAGTGGTACGCCGACCACAACGACATGCTCACGGAGCTCGTCGATATGGA
GATGGGTTGGAATGACCGAATAAAGTCGATGAACGTGAACGGTGGCCTCT
GACGGGTGTCATTCCAACCATTCAGCCGGCTGCGCAAAGCTGGTGTGAGT
GATTTTGTCACTGCGCGCAGCCGGATGCCTATAGGGTATCTGGGGGAGGT
TGATGCTGAGAGGGAGGCGGGGAGGTTTGACAGCTTCGGCGGCGTTCTCG
TTTTCGGCTTGTGTGGTGTTGCGATGGTGCAGTGAGGTAGCCGCGCCGTT
TTGTTCTTGTCTGGCGCACTCTGTTTCTCGTGCCTCTTCAGTCCCCGGCT
ATCATAGTTTCTGCGGTTTCTTGATGTCACGCGTTTTAGCTTCTGTCGCC
TAGGCGCGCCGATGTTTCTCCCTTGTCGTGATTCGACCGTAAAATTTACT
CTGTATGTTTTATCCCACCGTCCCGTCCCTGGTTTCATGGTTTTTACTTT
TGTGTGTTCTTGTGTGTATGGGTGGGTGCGTTGTGACGGGGTCTTGGGTC
ATAGGCTTTGTGGAAGGTGGTCGGATCACTTGTTCACATGTCTTGGAGTG
TCCTTGGTTTCTTCCGCAACTCCGCAGGCCGCAGCTGCTGTTTGATTTGC
GGTCCACCTAGAAGAGAGGTGAACGCAGATCAAAGGTTGTTTTTCGCTAT
TCGTTTTGTTAGCGGTATACACGGCCTTTTTTTGTTTATTGCTGCCCTCT
TGAAAGGTAGACTGCGTTGTTACACGTGATGATTTGTGTTTGCTAGATAG
CCTATTCTGGTTCACGCGGGGATGCACGTATCCCGTTCTCGACATTGGCC
AATCCGCGATTTTTTTTTCTGTACAGGTATCGTATGTCGTGCGCTGAGGG
CGGCACCCAATTGGCTCCGATTATTGTCTAGGTGATATATAGTAGGTGTA
CAACGGTTTTTGAGAGGCGGACATTTGCTGCAACAGGCCGGGCTCAGTGT
TCCCATAGCCTCGAGGTCTGTATGGCATTTGTACCATCCCGTCGAGTTTC
GATCCTTGGTAACCTATGTACGGATTGTTGCGATTACCCACGAAGTGGGG
AAAGCGCAGCATTGTCCGTACCGTCGTGTGCTGTTCCGCCCGATTTAAGG
CGTTCGGTATGATTTGGAACATTGAATTGCTGTGGTCTATCGCCTGCGGT
ATGAATGGACATAGCGGAGACCATACAAGTAAAATGGTACAGTCAGCGTA
GCAGGAGTACGTGATTGTGCCGACCGGTGTTGTAGCCCAATGCTGCGCAT
GTTGGTAAGGGAGGGCGAGGCTCTTATTCTATATATAATAGGAGTTGCGC
TTGTTTCTCTCCGGCGACCGATTCCGTAGAGCAAGCATCGTTCACTTTTG
TGAGAAGCGACCGGTCAGTAGTTAAGTGTGGGATCGAAGCCTGTGTCACA
ATGTCTAACCTTGGCAGTACATATTTGATTGATTGATTGATTTGCACACG
TATAGCCGATCGGCATAATCCGACCCGACTTGTGGTCAGACACGCAAAGA
GTACATATATACAATGATAATATGTGTGTCGTATACTGTAGGCCGGCTTT
CGCTTGGGCGTCTTTCTGCGTGTGGCAACGGGTGCGCGTTTTGGAGAGCT
TGGGTTCACACTAATCGGTTAGATTCTTCCCGCCATGTCTCGGAGGCGTG
ATAGGCGTGCTGAGAGGTGTGCAGCTCGTCGTGTGTTTTACCAAATGAAA
ACTTAAATCCAACGCTGGGTACTCACCAGTACATGCGGCAGGCGTTTTTT
CTTTCTTTTTCTGTCATACTACCACCACGGCTGCGCCTCACCTGCAAACT
GCAAGAAAGCGCGCTACAACAACTAACTACTGTTTGTTACAATTAATATC
TTAGAACGAGCCTCGCACATTCTCTTGGCCCAGCAAGTGTGATAGCTATA
TGCGGAGGCGCGTAACTATTATTATAATACTTAGTAGCAATATAGCAACA
GGCATGGCATGCGCAGAGTAGAGGTGGCCCGACACCTAAAGCACCTAACA
TGAATGCAAAGCCCCAAGGAAAGGCACTTCGAGACCTCTGACGTGAAAGA
AAGAGTTGTCACAAGTTCTACGCAAGAACAGCTGCAGCAGATGTACACGC
TTTTCGATGGCCCTTTCGCCAGTGCCCGGCCTGGCACTCCATCGAGCAGT
ACCGCACGCCCTGACATCGCGAGCAGCGTTTTACTCCGTCCTTCACACAG
CCTGGTCCGGCACACCGTCTCCCCAAGGCTAGCCCCAACGCCGTCGCCAA
ATGATCCGCGCGACCGCTTTTCCAGGTACCTTCGGCCTCCGACTTTCGCG
CGGCTTCCACCGCCCTCTGTCTGGCCTCAGTTGGAATCTGGTCGACGACG
CCGTTTAGCCAATTCGGGCGGACGTAAAAGTCGGCGAGGTGATCTCCCGC
CTCTTGGGCGATCCAGCTCCTCGCGTCGACGAACAGCTGCAGCCAGGCCG
TCCCAAGCCTAATTTTGTCCTCTTCAGACACTGCGTCTGCCGCTCCCGCC
AGAAGAGAAGTGGACACCAATAAAAAGCACAACGGGAGGTCCCCGGTCAC
GGGTACAGTCCGGTCGAACGCCGCGTGGCCTTCCAGGGAAGACACCAAGG
CGGAAACCGCACCGAGGCCTACCCAGAGCTCGGCGTATTTCGGCTCCAAC
GTGCTGTTGCTTGAGAAAAGTCCGGCGATCGTGGTAATCGCGCCCGCCGC
GGTGTTGACCTCCTGCGCCCCAGACGCGCCCGCAGTTTCAGGAGTGATGA
GCTGTTTTTGAGGGGATGCCATCGCCGAGAGAAGCGCCGATGGAAGCTCC
GCGTGTGATACCATAAGTTCACGCTCCTCACTCAACTCGGCAGCACCGTG
CAGCGCAAGCAAGCAAGCATACCGAAGAGCAGGGTGGCTTTGACTGGACC
TAAATAGGCCTAGGAGTTCTTCCATGCGTGGCCCCGCGACAAGGCCGGCG
AAGACGGCGAGGAATTCATCCCTAGGCAGTTCAGAGCAGGGCCCGAGCAA
GTTCCGCACCTGTCGATTGAGAGAGGAGCGAGCGGGCGTATGGGCCGAGG
ACGCACAGATGACGGGCAATGCTTCACTTTGGAAAGGTCTATGATACGAT
ATGTACATACAGTTTGTATTGTACGTATAAAATATAAAATACGATGCGAT
CGCGACCTTGTGTGCGGAACGAATTATATACAGAGTGTGCGTGCGCACTG
GGGTGCTTCATGTGACGGCCTGGGGAAAACCAAACCAAGTGCAAGCTTTT
GCGCACAAACTCTTGGCGGTTGTCACCTCGTTGCAAGCGGTGTAGGCCTG
GTAGTCCGTGTACTTGTAGGTGTCTTGGGGACTCTCCAGCGGCGGGACTT
CCCTCAGCTTTCGCAGCTCCTTCCACACCTTGTCGCAAACGGCGCTAGCC
ATCGAGCCGCTCGCAATCTCTTGACGTTTCCTGATGGACGCAAATGGCAA
CACGCGGGCAAGACACGCACACAGCGAGACCAATTTGAATTACCTGCGCA
ACAGCTGAGGCGAATGCAGCCCTGCTGTAGTGCTAACCTGGGTGGTTTGT
GACTCGTGAGATCTTGTATCATAGACGGATCACACGAAAGCAGAACATAC
ATGCTGACTTTTCACTTTTCGAAATCGCACACCGAGCCCAACTCACCTTT
TGATCACAGAGAACGAAAGCTTTTGACACCTCTCAATCCCCCTTACTCCT
CGACGACTTCGAAGGCAAAAAAAATGCTGCAGCTTGGTCAAAAGAGCACA
CACGCAGCAGACAGCCAGCAGCCGAGTCGTGGCAGCGAC
back to top

Coding sequence (CDS) from alignment at S-dermatodea_contig807:15252..24890-

>mRNA_S-dermatodea_contig807.16258.1 ID=mRNA_S-dermatodea_contig807.16258.1|Name=mRNA_S-dermatodea_contig807.16258.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2034bp|location=Sequence derived from alignment at S-dermatodea_contig807:15252..24890- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCCCGTCGTTGCGCAAGGAGAGGAAGACGTCACCGTTCCCTCCTTGAT
TGTCATCGGGGCGCGAATGCCCGTCGTTGCGCAAGGAGAGGAAGACGTCA
CCGTTCCCTCCTTGATTGTCATCGGGGCGCGAAGGTCCGGGTCGACATCG
CTGTTCAGCATGCTCGGCCAGCACCCCAACGTTGTCTCGATCGTACCCGA
AGTTGACCGTTCCGGTGGATTCATGTCGCAGGATCTGGCAAGAGGTCCGG
GTCGACATCGCTGTTCAGCATGCTCGGCCAGCACCCCAACGTTGTCTCGA
TCGTACCCGAAGTTGACCGTTCCGGTGGATTCATGTCGCAGGATCTGGCA
AGTTACCCACACGATGCCGAGTGGCCTGGCGACAGGTTAGAGACGGACAT
CCCCGCCGACAAGCTGGGGAGTCTTTTGGGCGAGTACGCGCGTCCCTTCA
CCTCTCCCGAGACGAACGAGGAGGGGGGTGCTCACATGCACAAGTTACCC
ACACGATGCCGAGTGGCCTGGCGACAGGTTAGAGACGGACATCCCCGCCG
ACAAGCTGGGGAGTCTTTTGGGCGAGTACGCGCGTCCCTTCACCTCTCCC
GAGACGAACGAGGAGGGGGGTGCTCACATGCACAAGCTCGTTACGGCGGA
GCTCAGCCCTGGATACCTTTCTTCTCCGTTGGCACCTTACCGACTGAAGG
TCTCCATGCCAGACGTGAAGATTGTTGTGGTGCTGCGGGACCCTGTAGAT
AGCTCGTTACGGCGGAGCTCAGCCCTGGATACCTTTCTTCTCCGTTGGCA
CCTTACCGACTGAAGGTCTCCATGCCAGACGTGAAGATTGTTGTGGTGCT
GCGGGACCCTGTAGATAGGTATTTCTCTGAGCTGCGACAGAAGCTATGCG
TGCCCAACGACAAAGATATTGACTGGGAGGACGTCAATTCCTCATTCGCC
ATGCCCAACTCCAGCAAGAACTATATGTCGGAGGTATTTCTCTGAGCTGC
GACAGAAGCTATGCGTGCCCAACGACAAAGATATTGACTGGGAGGACGTC
AATTCCTCATTCGCCATGCCCAACTCCAGCAAGAACTATATGTCGGAGGC
GGTATTGGATTTCTCCCCGTATGACAAGCGTTGCCTGGGAGAGGGGGCCT
CTGCCGAAGACTTGTGGGAGTGCCAACAAGCGGCGAGGCGAAGCCACCGG
CCGCTTCTGGAAGGGCTGTACGCTGGACAGATCGCGAGGTGGCAACGAGT
TTTCGACAAATCGCAGGCGGTATTGGATTTCTCCCCGTATGACAAGCGTT
GCCTGGGAGAGGGGGCCTCTGCCGAAGACTTGTGGGAGTGCCAACAAGCG
GCGAGGCGAAGCCACCGGCCGCTTCTGGAAGGGCTGTACGCTGGACAGAT
CGCGAGGTGGCAACGAGTTTTCGACAAATCGCAGATTAAAGTGGTGAGCT
CGAACATGCTCTTCGCGGAACCTGAGAAGATCGCAGCCGACGTGGCCAAG
TTTGCGGGGTTGGAGAAGCACACGTTTTTCGAGTTCGCCGTGGACAGATT
AAAGTGGTGAGCTCGAACATGCTCTTCGCGGAACCTGAGAAGATCGCAGC
CGACGTGGCCAAGTTTGCGGGGTTGGAGAAGCACACGTTTTTCGAGTTCG
CCGTGGACAGGGAGTCCTCGTGCGACCCTCGACGTCGAGGTTCCACCATC
TCCACGGCGTACTCGAAGCGCAAGGAGGCGGAGCCTAACTTCCGCAAGTG
GTACGCCGACCACAACGACATGCTCACGGAGCTCGTCGATATGGAGATGG
GTTGGAATGACCGAATAAAGTCGATGAACGTGAACGGTGGCCTCTGAGGA
GTCCTCGTGCGACCCTCGACGTCGAGGTTCCACCATCTCCACGGCGTACT
CGAAGCGCAAGGAGGCGGAGCCTAACTTCCGCAAGTGGTACGCCGACCAC
AACGACATGCTCACGGAGCTCGTCGATATGGAGATGGGTTGGAATGACCG
AATAAAGTCGATGAACGTGAACGGTGGCCTCTGA
back to top