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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1143 |
| Cds size | 1113 |
| Stop | 0 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig8045.16227.1 >prot_S-dermatodea_contig8045.16227.1 ID=prot_S-dermatodea_contig8045.16227.1|Name=mRNA_S-dermatodea_contig8045.16227.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=371bp
MYRTHALPGSRERLYCARHADEGMVDMGKKPCAQADCPKQARYGMKGSGE
RLFCAQHSREGMVVIHFMRKCPAEGCRVRPTFGVAGSKKPEYCARHARQG
MVDLSTRRCAQPMCNTMPTYGNEGSSRRDFCAQHAKPGMVDVAAKRCRHE
GCVKRASFGLEGSGETAAQYCFGHAGSGMVNVRSKKCANPGCRTRPIFAA
PGSLRGDFCSEHAKPGMVDVINKKCAQPGGCSKQPSYGTEGDKRAAFCAE
HAKAGMVNIVSIRCAEPQCHKHASYGFLGSKKREYCQKHAKEGMVHMDTS
RPTRRGGADDTAEDPQSGQPQPPQANVGISAPAEGGLLRRAMSKKRKDTG
VVVGAPAPAIPTNHNESSAAA back to topmRNA from alignment at S-dermatodea_contig8045:2153..3293+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig8045.16227.1 ID=mRNA_S-dermatodea_contig8045.16227.1|Name=mRNA_S-dermatodea_contig8045.16227.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1141bp|location=Sequence derived from alignment at S-dermatodea_contig8045:2153..3293+ (Saccorhiza dermatodea SderLu1190fm monoicous)
GGAGAGGTGTCGAGAACCGAACTGCGTCATGTACCGGACGCACGCGCTCC
CCGGCTCGCGGGAGCGGCTGTATTGCGCGCGGCACGCGGACGAGGGAATG
GTGGACATGGGGAAGAAGCCGTGCGCGCAGGCCGACTGTCCGAAGCAGGC
GAGATACGGGATGAAAGGGAGCGGGGAGCGGCTCTTCTGCGCGCAGCACT
CGCGAGAGGGCATGGTGGTGATCCATTTCATGAGAAAGTGTCCCGCGGAG
GGGTGCCGGGTTAGGCCGACGTTTGGGGTAGCGGGCTCCAAGAAGCCGGA
GTACTGCGCGCGGCACGCGAGGCAAGGGATGGTGGATCTCAGCACGAGGC
GGTGCGCGCAGCCGATGTGTAACACGATGCCGACCTACGGCAACGAGGGT
TCCAGCCGGAGAGATTTTTGCGCGCAGCACGCGAAGCCTGGCATGGTGGA
CGTGGCGGCCAAGAGATGCCGACACGAGGGCTGCGTTAAGCGAGCGTCTT
TTGGGCTCGAGGGCTCGGGTGAGACAGCGGCGCAGTACTGCTTCGGCCAC
GCGGGTAGCGGCATGGTAAACGTAAGGAGCAAGAAGTGCGCCAACCCCGG
GTGCAGGACGCGTCCAATTTTTGCCGCCCCGGGGAGCTTGAGAGGGGACT
TCTGCTCCGAGCACGCGAAGCCGGGCATGGTGGATGTCATCAACAAGAAG
TGCGCGCAGCCCGGGGGATGCTCGAAGCAGCCGTCGTACGGCACGGAGGG
GGACAAGCGCGCGGCGTTCTGCGCGGAGCACGCGAAGGCGGGCATGGTGA
ACATCGTGAGTATCAGGTGCGCCGAGCCGCAGTGCCACAAACACGCCTCC
TACGGCTTCCTGGGGAGCAAAAAGCGGGAGTATTGCCAGAAGCACGCGAA
GGAGGGCATGGTGCACATGGATACCTCTCGGCCAACGCGTCGCGGTGGCG
CGGACGACACCGCTGAGGATCCGCAGTCGGGGCAGCCACAGCCGCCGCAA
GCGAACGTCGGTATTAGCGCCCCTGCCGAGGGCGGGCTGTTGCGCCGCGC
CATGAGCAAGAAACGCAAGGATACTGGGGTGGTGGTCGGGGCGCCGGCGC
CGGCTATCCCGACGAACCATAACGAGAGCAGTGCTGCAGCC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig8045:2153..3293+ >mRNA_S-dermatodea_contig8045.16227.1 ID=mRNA_S-dermatodea_contig8045.16227.1|Name=mRNA_S-dermatodea_contig8045.16227.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2226bp|location=Sequence derived from alignment at S-dermatodea_contig8045:2153..3293+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTACCGGACGCACGCGCTCCCCGGCTCGCGGGAGCGGCTGTATTGCGC
GCGGCACGCGGACGAGGGAATGGTGGACATGGGGAAGAAGCCGTGCGCGC
AGGCCGACTGTCCGAAGCAGGCGAGATACGGGATGAAAGGGAGCGGGGAG
CGGCTCTTCTGCGCGCAGCACTCGCGAGAGGGCATGGTGGTGATCCATTT
CATGAGAAAGTGTCCCGCGGAGGGGTGCCGGGTTAGGCCGACGTTTGGGG
TAGCGGGCTCCAAGAAGCCGGAGTACTGCGCGCGGCACGCGAGGCAAGGG
ATGGTGGATCTCAGCACGAGGCGGTGCGCGCAGCCGATGTGTAACACGAT
GCCGACCTACGGCAACGAGGGTTCCAGCCGGAGAGATTTTTGCGCGCAGC
ACGCGAAGCCTGGCATGGTGGACGTGGCGGCCAAGAGATGCCGACACGAG
GGCTGCGTTAAGCGAGCGTCTTTTGGGCTCGAGGGCTCGGGTGAGACAGC
GGCGCAGTACTGCTTCGGCCACGCGGGTAGCGGCATGGTAAACGTAAGGA
GCAAGAAGTGCGCCAACCCCGGGTGCAGGACGCGTCCAATTTTTGCCGCC
CCGGGGAGCTTGAGAGGGGACTTCTGCTCCGAGCACGCGAAGCCGGGCAT
GGTGGATGTCATCAACAAGAAGTGCGCGCAGCCCGGGGGATGCTCGAAGC
AGCCGTCGTACGGCACGGAGGGGGACAAGCGCGCGGCGTTCTGCGCGGAG
CACGCGAAGGCGGGCATGGTGAACATCGTGAGTATCAGGTGCGCCGAGCC
GCAGTGCCACAAACACGCCTCCTACGGCTTCCTGGGGAGCAAAAAGCGGG
AGTATTGCCAGAAGCACGCGAAGGAGGGCATGGTGCACATGGATACCTCT
CGGCCAACGCGTCGCGGTGGCGCGGACGACACCGCTGAGGATCCGCAGTC
GGGGCAGCCACAGCCGCCGCAAGCGAACGTCGGTATTAGCGCCCCTGCCG
AGGGCGGGCTGTTGCGCCGCGCCATGAGCAAGAAACGCAAGGATACTGGG
GTGGTGGTCGGGGCGCCGGCGCCGGCTATCCCGACGAACCATAACGAGAG
CAGTGCTGCAGCCATGTACCGGACGCACGCGCTCCCCGGCTCGCGGGAGC
GGCTGTATTGCGCGCGGCACGCGGACGAGGGAATGGTGGACATGGGGAAG
AAGCCGTGCGCGCAGGCCGACTGTCCGAAGCAGGCGAGATACGGGATGAA
AGGGAGCGGGGAGCGGCTCTTCTGCGCGCAGCACTCGCGAGAGGGCATGG
TGGTGATCCATTTCATGAGAAAGTGTCCCGCGGAGGGGTGCCGGGTTAGG
CCGACGTTTGGGGTAGCGGGCTCCAAGAAGCCGGAGTACTGCGCGCGGCA
CGCGAGGCAAGGGATGGTGGATCTCAGCACGAGGCGGTGCGCGCAGCCGA
TGTGTAACACGATGCCGACCTACGGCAACGAGGGTTCCAGCCGGAGAGAT
TTTTGCGCGCAGCACGCGAAGCCTGGCATGGTGGACGTGGCGGCCAAGAG
ATGCCGACACGAGGGCTGCGTTAAGCGAGCGTCTTTTGGGCTCGAGGGCT
CGGGTGAGACAGCGGCGCAGTACTGCTTCGGCCACGCGGGTAGCGGCATG
GTAAACGTAAGGAGCAAGAAGTGCGCCAACCCCGGGTGCAGGACGCGTCC
AATTTTTGCCGCCCCGGGGAGCTTGAGAGGGGACTTCTGCTCCGAGCACG
CGAAGCCGGGCATGGTGGATGTCATCAACAAGAAGTGCGCGCAGCCCGGG
GGATGCTCGAAGCAGCCGTCGTACGGCACGGAGGGGGACAAGCGCGCGGC
GTTCTGCGCGGAGCACGCGAAGGCGGGCATGGTGAACATCGTGAGTATCA
GGTGCGCCGAGCCGCAGTGCCACAAACACGCCTCCTACGGCTTCCTGGGG
AGCAAAAAGCGGGAGTATTGCCAGAAGCACGCGAAGGAGGGCATGGTGCA
CATGGATACCTCTCGGCCAACGCGTCGCGGTGGCGCGGACGACACCGCTG
AGGATCCGCAGTCGGGGCAGCCACAGCCGCCGCAAGCGAACGTCGGTATT
AGCGCCCCTGCCGAGGGCGGGCTGTTGCGCCGCGCCATGAGCAAGAAACG
CAAGGATACTGGGGTGGTGGTCGGGGCGCCGGCGCCGGCTATCCCGACGA
ACCATAACGAGAGCAGTGCTGCAGCC back to top
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