mRNA_S-dermatodea_contig8022.16206.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig8022.16206.1
Unique NamemRNA_S-dermatodea_contig8022.16206.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig8022.16206.1 vs. uniprot
Match: D8LM38_ECTSI (Excision repair helicase ercc-6-related n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM38_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 4.910e-80
Identity = 132/176 (75.00%), Postives = 143/176 (81.25%), Query Frame = 1 
Query: 1510 AFSVPAELYKRMYPHQRTGIRWLWGLHQGDMGGILGDDMGLGKTFQVTCFLAGLFSTDQAASALVLAPKSVMRGWETELKRWLVRAACPLAEVVVLVSEMSAKARRKAILEAADGGALGRGAVLVTTYGMVSANPHHFAP------------RGAEHKWDYVVLDEGHKIKNSSTR 2001
            AFSVPAELY RMY HQR G+RWLW LHQGDMGGILGDDMGLGKTFQVTCFLAGLF T QA SALVLAPKSVMRGWE EL RWLVRAACP AEVVV+ SEM AKARR+AI  AA+GG+ GRGAVL+TTYGMVS+NP  FAP               +H WDYV+LDEGHKIKN+ST+
Sbjct:   34 AFSVPAELYNRMYAHQRIGVRWLWSLHQGDMGGILGDDMGLGKTFQVTCFLAGLFGTRQAKSALVLAPKSVMRGWEDELGRWLVRAACPKAEVVVMASEMPAKARRRAIALAAEGGSRGRGAVLITTYGMVSSNPKQFAPAVGGSGGWIEREEPRKHVWDYVILDEGHKIKNASTK 209
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BLAST of mRNA_S-dermatodea_contig8022.16206.1 vs. uniprot
Match: A0A6H5KD23_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD23_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 1.120e-72
Identity = 133/180 (73.89%), Postives = 145/180 (80.56%), Query Frame = 1 
Query: 1510 AFSVPAELYKRMYPHQRTGIRWLWGLHQGDMGGILGDDMGLGKTFQVTCFLAGLFSTDQAASALVLAPKSVMRGWETELKRWLVRAACPLAEV----VVLVSEMSAKARRKAILEAADGGALGRGAVLVTTYGMVSANPHHFAP----------RGA--EHKWDYVVLDEGHKIKNSSTR 2001
            AFSVPAELY RMY HQR G+RWLW LHQGDMGGILGDDMGLGKTFQVTCFLAGLF T QA SALVLAPKSVMRGWE EL RWLV+AACP AEV    VV+ SEM AKARR+AI  AA+GG+ GRGAVL+TTYGMVS+NP  FAP          RG   +H WDYV+LDEGHKIKN+ST+
Sbjct:  500 AFSVPAELYNRMYAHQRIGVRWLWSLHQGDMGGILGDDMGLGKTFQVTCFLAGLFGTRQAKSALVLAPKSVMRGWEDELGRWLVKAACPKAEVRQEVVVMASEMPAKARRRAIALAAEGGSRGRGAVLITTYGMVSSNPKQFAPAVGGSGGWIERGEPRQHVWDYVILDEGHKIKNASTK 679
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BLAST of mRNA_S-dermatodea_contig8022.16206.1 vs. uniprot
Match: A0A7S2UB82_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB82_9STRA)

HSP 1 Score: 134 bits (338), Expect = 8.290e-33
Identity = 69/162 (42.59%), Postives = 101/162 (62.35%), Query Frame = 1 
Query: 1519 VPAELYKRMYPHQRTGIRWLWGLHQGDMGGILGDDMGLGKTFQVTCFLAGLFSTDQAASALVLAPKSVMRGWETELKRWLVRAAC-PLAEVVVLVSEMSAKARRKAILEAADGGALGRGAVLVTTYGMVSANPHHFAPRGAEHKWDYVVLDEGHKIKNSSTR 2001
            VP  LY  +Y HQ++G++W+  +H   +GGILGDDMG+GKT+Q   F+ GL       SALV+AP +++R WE E +R ++R  C P   + V+ S++    R + ++EA          V +TTYG+V ++P  F P G   +WDYV+LDEGHKIKN S +
Sbjct:   15 VPRPLYDSLYNHQKSGVQWMASMHNNRIGGILGDDMGMGKTYQTLTFIGGLMKAKTIKSALVVAPVTLLRTWEKEAER-VIRTLCLPRVNIKVVSSDIKEPRRSRVLVEALSCSPQSPHLV-ITTYGLVGSSPLSFVPDGCA-EWDYVILDEGHKIKNPSAK 173
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BLAST of mRNA_S-dermatodea_contig8022.16206.1 vs. uniprot
Match: A0A7S2E6H2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6H2_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.100e-31
Identity = 76/164 (46.34%), Postives = 103/164 (62.80%), Query Frame = 1 
Query: 1519 VPAELYKRMYPHQRTGIRWLWGLHQGDM-GGILGDDMGLGKTFQVTCFLAGLFSTDQAASALVLAPKSVMRGWETELKRWLVRAACPLAEVVVLVSEMSAKARRKAILEAADGGALGRGAVLVTTYGMVSANPHHFAP--RGAEHKWDYVVLDEGHKIKNSSTR 2001
            +P++LY R+YPHQR G+RW+  LH   + GGILGDDMG+GKT+Q   +L GL  +    +AL++ P S+MR WE E +  L R   P   + VL S++  K RR  IL  A   +     +++TTYG+VS+NP    P     E  WDYVVLDEGHKIKN +T+
Sbjct:  364 IPSDLYHRLYPHQRVGVRWIASLHNAPITGGILGDDMGMGKTYQTLTYLGGLMKSKTIRNALIICPVSLMRTWEREARDILERCCVPRITISVLASDVR-KPRRHDILVDALTTSYKYPQLVITTYGLVSSNPLDLIPVENEQERLWDYVVLDEGHKIKNPTTK 526
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BLAST of mRNA_S-dermatodea_contig8022.16206.1 vs. uniprot
Match: A0A087TZQ3_STEMI (DNA excision repair protein ERCC-6-like protein (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087TZQ3_STEMI)

HSP 1 Score: 130 bits (326), Expect = 4.230e-31
Identity = 72/165 (43.64%), Postives = 96/165 (58.18%), Query Frame = 1 
Query: 1504 LVA--FSVPAELYKRMYPHQRTGIRWLWGLHQGDMGGILGDDMGLGKTFQVTCFLAGLFSTDQAASALVLAPKSVMRGWETELKRWLVRAACPLAEVVVLVSEMSAKARRKAILEAADGGALGRGAVLVTTYGMVSANPHHFAPR-GAEHKWDYVVLDEGHKIKN 1989
            LVA  F +  E+Y+++YP+QR G+ W+W L +   GG+LGDDMGLGKTFQV  FL+GL   D     L++ P S++  WE E K+W     CP   V       S K R + +L         RG VL+T+YGM+ +N        G +  WDYV+LDEGHKIKN
Sbjct:    3 LVADEFHIFHEIYEKLYPYQREGVAWMWSLFKKRKGGVLGDDMGLGKTFQVIAFLSGLIDADLVKHILIIMPVSLLPNWEREFKKW-----CPGISVHCFHGS-SKKERERNLLRVQR-----RGQVLLTSYGMILSNIDSLTSLDGEKFVWDYVILDEGHKIKN 156
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BLAST of mRNA_S-dermatodea_contig8022.16206.1 vs. uniprot
Match: A0A7S4JE07_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JE07_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.570e-29
Identity = 73/164 (44.51%), Postives = 103/164 (62.80%), Query Frame = 1 
Query: 1519 VPAELYKRMYPHQRTGIRWLWGLHQGDMGGILGDDMGLGKTFQVTCFLAGLFSTDQAASALVLAPKSVMRGWETELKRWLVRAACPLAEVVVLVSEMSAKARRKAILEAADGGALGRGAVLVTTYGMVSANPHHFA---PRGAEHKWDYVVLDEGHKIKNSSTR 2001
            VP +LY R+Y HQ+ G++WL  LH   +GGILGDDMGLGKTFQ   FL GL  +    SALV  P S++R WE E +  L  +      + V+ S++S K +R  +L++A   +     + +TTYG+V++NP+ F      G +  W+YV+LDEGHKIKN ST+
Sbjct:  206 VPRDLYDRLYDHQKVGVQWLASLHTDGIGGILGDDMGLGKTFQTLTFLGGLMVSGTIRSALVCCPVSLLRTWEKEARDILEESFGLDVSISVISSDVSKK-KRTQLLQSAMNCSTKYPHLAITTYGLVTSNPYDFIRTDQNGEKMAWNYVILDEGHKIKNPSTK 368
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BLAST of mRNA_S-dermatodea_contig8022.16206.1 vs. uniprot
Match: A0A7D9M5I8_PARCT (DNA excision repair ERCC-6-like (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M5I8_PARCT)

HSP 1 Score: 127 bits (318), Expect = 1.770e-29
Identity = 65/165 (39.39%), Postives = 97/165 (58.79%), Query Frame = 1 
Query: 1513 FSVPAELYKRMYPHQRTGIRWLWGLHQGDMGGILGDDMGLGKTFQVTCFLAGLFSTDQAASALVLAPKSVMRGWETELKRWLVRAACPLAEVVVLVSEMSAKARRKAILEAADGGALGRGAVLVTTYGMVSANPHHFAPR--GAEHKWDYVVLDEGHKIKNSSTR 2001
            F +P ++Y ++YP+Q+ GI W W L++G  GGILGDDMGLGKT QV  FLAG+F +    +AL++ P S++  WE E K+W    A  +       S M  +    A +++ +G       V +TTYG+ +     F+    G    WDY++LDEGHKIKN++ +
Sbjct:   23 FKLPEKIYSKLYPYQKEGIMWFWRLYEGRKGGILGDDMGLGKTIQVISFLAGMFGSGHVKNALIIMPVSLLTNWEKEFKKW----APEIRVRNFHGSNMKQRIDNLAKVQSRNG-------VCLTTYGLANTCHKQFSEDRYGDTFTWDYIILDEGHKIKNTANK 176
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BLAST of mRNA_S-dermatodea_contig8022.16206.1 vs. uniprot
Match: UPI0003F059C9 (DNA excision repair protein ERCC-6-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F059C9)

HSP 1 Score: 135 bits (341), Expect = 3.060e-29
Identity = 72/166 (43.37%), Postives = 96/166 (57.83%), Query Frame = 1 
Query: 1513 FSVPAELYKRMYPHQRTGIRWLWGLHQGDMGGILGDDMGLGKTFQVTCFLAGLFSTDQAASALVLAPKSVMRGWETELKRWLVRAACPLAEVVVLVSEMSAKARRKAILEAADGGALGRGAVLVTTYGMVSANPHHFAPR---GAEHKWDYVVLDEGHKIKNSSTR 2001
            FS+  ELY+++YP+QR  I W WGLH+   GGILGDDMGLGKT QV  FL+GLF  ++  S L++ P +++  WE E  +W          + VL    S K  R+  L         RG  L++TYG++S N    A     G +  WDYV+LDEGHKIKN S +
Sbjct:  109 FSIRKELYEKLYPYQRESILWFWGLHKKKSGGILGDDMGLGKTIQVIAFLSGLFDAERVKSILIVLPATLIINWEREFDKWA-------PGIRVLTYHGSNKRERERALSKVQR----RGGALLSTYGIISNNWQEVATNDRDGRDFVWDYVILDEGHKIKNKSNK 263
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BLAST of mRNA_S-dermatodea_contig8022.16206.1 vs. uniprot
Match: A0A8J4SVW6_9TREM (DNA excision repair protein ERCC-6 n=1 Tax=Paragonimus heterotremus TaxID=100268 RepID=A0A8J4SVW6_9TREM)

HSP 1 Score: 133 bits (335), Expect = 1.470e-28
Identity = 78/184 (42.39%), Postives = 105/184 (57.07%), Query Frame = 1 
Query: 1513 FSVPAELYKRMYPHQRTGIRWLWGLHQGDMGGILGDDMGLGKTFQVTCFLAGLF-STDQAASALVLAPKSVMRGWETELKRWLVRAACPLAEVVVLVSEMSAKARRKAILEAADGGALGRGAVLVTTYGM-----------VSANPHHFAPR---------GAEHKWDYVVLDEGHKIKNSSTR 2001
            F +P+ELY+++YP+QR G+RWLW LH    GG+L DDMGLGKT QV  FL+GLF S  +  SALV+ P SV+  WE ELKRW      P   VVVL  ++   AR + + +        +G +++TTYG+           ++ANP               G E  W+YV+LDE HKIKN S +
Sbjct:  219 FLMPSELYEKLYPYQREGVRWLWHLHNNGPGGVLADDMGLGKTVQVIAFLSGLFISRPRRFSALVIMPVSVLVTWEAELKRW-----APALRVVVL-HDIGRVARLRQLSKVQH-----QGGIVLTTYGLMASSALDFVIDINANPQFLRSMPASNDLQRVGREFTWNYVILDEAHKIKNPSAK 391
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BLAST of mRNA_S-dermatodea_contig8022.16206.1 vs. uniprot
Match: UPI000C6E16C4 (DNA excision repair protein ERCC-6-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E16C4)

HSP 1 Score: 124 bits (311), Expect = 2.080e-28
Identity = 64/160 (40.00%), Postives = 91/160 (56.88%), Query Frame = 1 
Query: 1513 FSVPAELYKRMYPHQRTGIRWLWGLHQGDMGGILGDDMGLGKTFQVTCFLAGLFSTDQAASALVLAPKSVMRGWETELKRWLVRAACPLAEVVVLVSEMSAKARRKAILEAADGGALGRGAVLVTTYGMVSANPHHFAPR-GAEHKWDYVVLDEGHKIKN 1989
            F +  EL+ ++Y +QR G++WLW L++   GG+LGDDMGLGKT Q+  FL+G+F  ++    L++ P S++  W+ E K+W+     P        S    K  R  I     GG      VL+T+YG V  N    + R G E  WDYV+LDEGH+IKN
Sbjct:   15 FYLHHELFNKLYSYQRDGVKWLWNLYKKKKGGVLGDDMGLGKTIQIIAFLSGMFDLEEIKHVLIIMPVSLLPNWDREFKKWV-----PGMNTSNFYSSNKRKRERNLIKVQCYGG------VLLTSYGTVITNSEILSKREGREFVWDYVILDEGHRIKN 163
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8022.16206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM38_ECTSI4.910e-8075.00Excision repair helicase ercc-6-related n=1 Tax=Ec... [more]
A0A6H5KD23_9PHAE1.120e-7273.89Helicase ATP-binding domain-containing protein n=1... [more]
A0A7S2UB82_9STRA8.290e-3342.59Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S2E6H2_9STRA2.100e-3146.34Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A087TZQ3_STEMI4.230e-3143.64DNA excision repair protein ERCC-6-like protein (F... [more]
A0A7S4JE07_9STRA1.570e-2944.51Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7D9M5I8_PARCT1.770e-2939.39DNA excision repair ERCC-6-like (Fragment) n=2 Tax... [more]
UPI0003F059C93.060e-2943.37DNA excision repair protein ERCC-6-like n=1 Tax=Sa... [more]
A0A8J4SVW6_9TREM1.470e-2842.39DNA excision repair protein ERCC-6 n=1 Tax=Paragon... [more]
UPI000C6E16C42.080e-2840.00DNA excision repair protein ERCC-6-like n=1 Tax=Ce... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8022contigS-dermatodea_contig8022:3830..7294 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score264.6
Seed ortholog evalue1.2e-67
Seed eggNOG ortholog2880.D8LM38
Preferred nameERCC6L
KEGG koko:K20093
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008094,GO:0015616,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0042623,GO:0044424,GO:0044444,GO:0044464,GO:0140097
EggNOG free text desc.histone H2A-H2B dimer displacement
EggNOG OGsCOG0553@1,KOG0387@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSNF2-related helicase domain protein
Ec32 orthologEc-06_002330.1
Exons4
Model size2004
Cds size2004
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8022.16206.1prot_S-dermatodea_contig8022.16206.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig8022 3830..7294 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925314.5944674-CDS-S-dermatodea_contig8022:3829..49411622925314.5944674-CDS-S-dermatodea_contig8022:3829..4941Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8022 3830..4941 +
1694079849.182007-CDS-S-dermatodea_contig8022:3829..49411694079849.182007-CDS-S-dermatodea_contig8022:3829..4941Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8022 3830..4941 +
1622925314.6042595-CDS-S-dermatodea_contig8022:5109..56441622925314.6042595-CDS-S-dermatodea_contig8022:5109..5644Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8022 5110..5644 +
1694079849.192096-CDS-S-dermatodea_contig8022:5109..56441694079849.192096-CDS-S-dermatodea_contig8022:5109..5644Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8022 5110..5644 +
1622925314.6165762-CDS-S-dermatodea_contig8022:6332..64701622925314.6165762-CDS-S-dermatodea_contig8022:6332..6470Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8022 6333..6470 +
1694079849.200323-CDS-S-dermatodea_contig8022:6332..64701694079849.200323-CDS-S-dermatodea_contig8022:6332..6470Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8022 6333..6470 +
1622925314.6294641-CDS-S-dermatodea_contig8022:7075..72941622925314.6294641-CDS-S-dermatodea_contig8022:7075..7294Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8022 7076..7294 +
1694079849.218085-CDS-S-dermatodea_contig8022:7075..72941694079849.218085-CDS-S-dermatodea_contig8022:7075..7294Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig8022 7076..7294 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig8022.16206.1

>prot_S-dermatodea_contig8022.16206.1 ID=prot_S-dermatodea_contig8022.16206.1|Name=mRNA_S-dermatodea_contig8022.16206.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=668bp
MDANKRARDASRTPMRTPGKSDFKRPAFALGRISFGSSSSSDAESSLEKG
RDFELQSAAAASTAARPSAAPASPCALTTSSRPLPSRADPNILADRSLRN
NEAPDAEHGKRPARFSSSSSAIGEAGSFGDSRRPAVVPNKCKGFFDFQVP
ADRRPRQKEEEEGRGSRSAATAGRGRFAVDLSRDDDEENVAPEAETSGRR
APEGGGGGGAATAAAAGAGSSSASPSCTGGASWHSSPPRLGYEERSSSCG
GFAGEFDGEDLFDGGVYVYSPSPPPAAAGAGAGAANSSASAPSPAPEASG
SSPVRSQVVDLSYSSPPSGPLSAERMRGELGRRRGGLASTSRTSEEKNSG
GNVCSDADDNNIDAFADCVDVGLSSRGSGAGAHHGVNVEEDATGEGSDVD
VAMVVAAGPSARGAGAGAAGAGAGDRSTGASARAVTAGAAEAGAPGASAG
GRYFKPGETGDWEREASGSRWKMEAEGPAGGSESAAGSGLGSGSARKGGR
GLVAFSVPAELYKRMYPHQRTGIRWLWGLHQGDMGGILGDDMGLGKTFQV
TCFLAGLFSTDQAASALVLAPKSVMRGWETELKRWLVRAACPLAEVVVLV
SEMSAKARRKAILEAADGGALGRGAVLVTTYGMVSANPHHFAPRGAEHKW
DYVVLDEGHKIKNSSTR*
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mRNA from alignment at S-dermatodea_contig8022:3830..7294+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig8022.16206.1 ID=mRNA_S-dermatodea_contig8022.16206.1|Name=mRNA_S-dermatodea_contig8022.16206.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3465bp|location=Sequence derived from alignment at S-dermatodea_contig8022:3830..7294+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGACGCGAACAAGCGTGCCCGCGATGCGAGTAGGACGCCGATGAGGAC
GCCAGGCAAGAGCGATTTCAAGAGACCCGCGTTCGCCCTCGGTCGGATAA
GCTTTGGGAGCAGCAGCTCCTCCGACGCTGAAAGTTCTCTCGAGAAGGGC
CGCGATTTCGAGCTGCAAAGCGCTGCTGCTGCATCTACTGCTGCTAGACC
CTCCGCTGCCCCGGCGTCCCCTTGTGCCTTGACGACAAGCAGCCGACCGC
TGCCTTCAAGGGCGGACCCCAACATCCTTGCCGATCGAAGCCTCCGAAAC
AACGAGGCCCCGGACGCGGAGCACGGGAAACGACCGGCTCGCTTCTCCTC
CTCGAGCTCCGCGATCGGCGAGGCTGGGTCCTTCGGCGACAGTCGGCGCC
CCGCCGTGGTGCCCAACAAGTGCAAGGGATTCTTCGACTTTCAAGTGCCA
GCGGATCGGCGGCCGCGGCAGAAGGAGGAGGAGGAGGGGCGGGGAAGCAG
GTCGGCCGCAACAGCGGGCAGAGGACGCTTCGCCGTTGACTTAAGCAGAG
ATGATGATGAGGAGAACGTTGCGCCCGAAGCGGAAACATCAGGCCGGCGC
GCACCAGAAGGCGGTGGTGGTGGTGGTGCTGCTACTGCTGCTGCTGCGGG
CGCGGGGTCGAGCTCTGCTTCTCCTTCTTGCACGGGGGGGGCATCATGGC
ACTCCTCGCCACCGCGGCTCGGATACGAAGAAAGATCGTCCTCATGTGGT
GGCTTCGCAGGAGAGTTTGACGGTGAGGACTTGTTTGATGGTGGCGTGTA
CGTCTACTCGCCATCGCCCCCTCCAGCAGCAGCTGGAGCTGGAGCTGGAG
CAGCGAACAGCAGCGCTAGCGCTCCTAGCCCCGCGCCAGAAGCTAGTGGG
TCGAGCCCGGTCCGAAGCCAAGTAGTGGACCTGTCGTACTCATCGCCACC
GTCTGGTCCGCTGTCCGCTGAACGGATGCGTGGTGAGCTCGGTCGCAGAA
GGGGCGGCCTCGCCTCTACGAGTCGGACCTCCGAAGAGAAAAACAGCGGT
GGCAATGTCTGTTCCGACGCTGATGATAACAATATCGACGCATTTGCCGA
CTGCGTAGACGTGTGGGAGAATGACGTGGAGGTCTTCCACGATTCCTTCA
ACCTTCACAACACCAGCAGCAGCAGCAGCAGTAGGCATAGCAGCACTCGA
GGCGCCTCCTCCTCCACCCCTAGCAGCAGGGGCAGCGATGGCTCGCGAAA
GTCCGGCGGAGCTTCGAGATATTCGGGCAGTGGACTATCCAGCCGTGGCA
GCGGTGCCGGCGCACACCACGGGGTAAATGTCGAGGAGGACGCTACCGGC
GAGGGCAGCGACGTCGACGTTGCGATGGTCGTTGCGGCCGGACCAAGCGC
TCGGGGGGCTGGGGCGGGCGCAGCTGGGGCGGGCGCAGGTGATCGGTCGA
CCGGAGCCAGCGCTAGGGCGGTCACAGCTGGGGCGGCCGAGGCGGGCGCC
CCTGGAGCGAGTGCAGGTGGTCGGTACTTCAAACCGGGGGAGACTGGCGA
CTGGGAGCGAGAAGCAAGCGGCTCGCGCTGGAAAATGGAGGCTGAGGGGC
CGGCAGGCGGGAGCGAGTCGGCGGCAGGGTCGGGGTTGGGTTCGGGGTCG
GCGCGGAAGGGAGGGCGCGGGTTGGTGGCTTTCTCAGTGCCGGCTGAGCT
GTACAAGAGGATGTATCCGCACCAGCGCACGGGGATTCGGTGGCTTTGGG
GTCTGCACCAGGGGGACATGGGCGGTATCTTGGGGGACGACATGGGCCTG
GGCAAGACGTTCCAGGTGAGACAGAGGGTTTTCGCGATGGGAGGGAGGTT
TTTTTCGCAGATCTTCGTCTTTTGTGGCTGTGAATGAGTGTTTGTCTCGG
CGGTTGGTTGTTGGACAAGCTCCGTATATACTAAGGTTTGCCGATGGTCA
GCTGTTGGTAAATGGTGCCGCCCACCATCCACCATGCGCTAAGTTCACCA
ACAATGCCCGTGTTATTTTTTTATCGAGCGAGGCGGTGGTATCGCCATTT
ACCTTAATAATTATTTCATTTACCTCGGTGTACCCTGTGTTCCCGTTTCT
TGGCGGTGCCGATGTCAGACCGCGGTAGTATGTACGTGTGTACGTGCTGT
GAAACTAAACTATGCATCTGCACGGTCTGTACGAAGCATCGTGGCGAGGC
AAGCCCCGATTGCACCGGGCAGCTCACAAACAGTGCAACAGCAGCCTGTT
CCTTGTGCCCCGTACCGCCGCCAACTCTTCCCCTTGCCGGTAATTACCAA
GAAAAACGGCAGCTATCACCACCTGGACCATCGCAGACGAGCAGTCGAAT
CCCGCGTTTCCTCTCGCCCGTCTGTTTCACTTGCATCGTATATACAACAG
TATATGTAGTATTCCTATCGAATTCCCCCAGGCGCTTTCCGCGCGTTGAC
GAGCGCCATCTCGGAAGAATGACCTTGTCCTGTGATTGTGTTTGTGTGTG
CAGGTAACCTGCTTCCTCGCGGGGCTTTTCTCCACGGATCAGGCGGCGAG
CGCCCTCGTGCTGGCTCCGAAGAGCGTGATGCGCGGCTGGGAGACGGAGT
TGAAGCGGTGGCTGGTCCGGGCTGCCTGTCCTCTGGCCGAGGTGACCCGC
GATGGCATGCAGTGGCTCACAAGCATTGTATACTGTTGTAGTCGGCGCTT
ATTTACTGTAACTCCCTTTGGTTCGTTCGGCGTTACGGTTTCTGCATCGG
TTATTTTTGCAGATGATGTGTCGATGTAGCAGCTCCCACCAATGGCGATG
AGATGCTTGCGACTACTGGTAAAATAAAAATATATAGTTTACGACTGGTA
CTGCATGTTACATGATATTGATGGCACGTAATGTGCCTCGAACAATTGCA
ATGGCCTTGGGGGGCGTGTTGCACGGCTGGTGACCTTCTACCCAAGAAAC
ATATGTACTGTACCCAAGTAACACATGAACATATATAGGTTAAAGTATCT
GAAAGGGAAATTCGTGTACCGCCTTCGCCCGAACGCATTTGAAAATATGT
GATGTGTTGTAACCCTAAGACCCACCTGAGCTGCAGGCGAAGCGCTGGTA
CCCGACAACATTAAAAGGCACAACTCCTTTCAAACTTAAAACAAAAAATC
CTTTTGTCGAATGAGACACTGGTGAATAAAACCTTTTTTGGTATGACCCC
CCCCATGACCCCCCAACCTCCCCCTACCAAACCCATACAAATCAAGGTAG
TCGTACTTGTGAGCGAAATGTCCGCGAAGGCGAGGCGAAAGGCTATCCTT
GAAGCGGCGGATGGAGGCGCCTTGGGCCGAGGTGCCGTTCTGGTGACGAC
CTACGGCATGGTGTCGGCAAACCCGCACCACTTCGCTCCGCGAGGGGCCG
AGCACAAGTGGGACTACGTGGTCCTTGACGAGGGCCACAAGATCAAGAAC
TCATCCACGCGGTAG
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Coding sequence (CDS) from alignment at S-dermatodea_contig8022:3830..7294+

>mRNA_S-dermatodea_contig8022.16206.1 ID=mRNA_S-dermatodea_contig8022.16206.1|Name=mRNA_S-dermatodea_contig8022.16206.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=4008bp|location=Sequence derived from alignment at S-dermatodea_contig8022:3830..7294+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGACGCGAACAAGCGTGCCCGCGATGCGAGTAGGACGCCGATGAGGAC
GCCAGGCAAGAGCGATTTCAAGAGACCCGCGTTCGCCCTCGGTCGGATAA
GCTTTGGGAGCAGCAGCTCCTCCGACGCTGAAAGTTCTCTCGAGAAGGGC
CGCGATTTCGAGCTGCAAAGCGCTGCTGCTGCATCTACTGCTGCTAGACC
CTCCGCTGCCCCGGCGTCCCCTTGTGCCTTGACGACAAGCAGCCGACCGC
TGCCTTCAAGGGCGGACCCCAACATCCTTGCCGATCGAAGCCTCCGAAAC
AACGAGGCCCCGGACGCGGAGCACGGGAAACGACCGGCTCGCTTCTCCTC
CTCGAGCTCCGCGATCGGCGAGGCTGGGTCCTTCGGCGACAGTCGGCGCC
CCGCCGTGGTGCCCAACAAGTGCAAGGGATTCTTCGACTTTCAAGTGCCA
GCGGATCGGCGGCCGCGGCAGAAGGAGGAGGAGGAGGGGCGGGGAAGCAG
GTCGGCCGCAACAGCGGGCAGAGGACGCTTCGCCGTTGACTTAAGCAGAG
ATGATGATGAGGAGAACGTTGCGCCCGAAGCGGAAACATCAGGCCGGCGC
GCACCAGAAGGCGGTGGTGGTGGTGGTGCTGCTACTGCTGCTGCTGCGGG
CGCGGGGTCGAGCTCTGCTTCTCCTTCTTGCACGGGGGGGGCATCATGGC
ACTCCTCGCCACCGCGGCTCGGATACGAAGAAAGATCGTCCTCATGTGGT
GGCTTCGCAGGAGAGTTTGACGGTGAGGACTTGTTTGATGGTGGCGTGTA
CGTCTACTCGCCATCGCCCCCTCCAGCAGCAGCTGGAGCTGGAGCTGGAG
CAGCGAACAGCAGCGCTAGCGCTCCTAGCCCCGCGCCAGAAGCTAGTGGG
TCGAGCCCGGTCCGAAGCCAAGTAGTGGACCTGTCGTACTCATCGCCACC
GTCTGGTCCGCTGTCCGCTGAACGGATGCGTGGTGAGCTCGGTCGCAGAA
GGGGCGGCCTCGCCTCTACGAGTCGGACCTCCGAAGAGAAAAACAGCGGT
GGCAATGTCTGTTCCGACGCTGATGATAACAATATCGACGCATTTGCCGA
CTGCGTAGACGTATGGACGCGAACAAGCGTGCCCGCGATGCGAGTAGGAC
GCCGATGAGGACGCCAGGCAAGAGCGATTTCAAGAGACCCGCGTTCGCCC
TCGGTCGGATAAGCTTTGGGAGCAGCAGCTCCTCCGACGCTGAAAGTTCT
CTCGAGAAGGGCCGCGATTTCGAGCTGCAAAGCGCTGCTGCTGCATCTAC
TGCTGCTAGACCCTCCGCTGCCCCGGCGTCCCCTTGTGCCTTGACGACAA
GCAGCCGACCGCTGCCTTCAAGGGCGGACCCCAACATCCTTGCCGATCGA
AGCCTCCGAAACAACGAGGCCCCGGACGCGGAGCACGGGAAACGACCGGC
TCGCTTCTCCTCCTCGAGCTCCGCGATCGGCGAGGCTGGGTCCTTCGGCG
ACAGTCGGCGCCCCGCCGTGGTGCCCAACAAGTGCAAGGGATTCTTCGAC
TTTCAAGTGCCAGCGGATCGGCGGCCGCGGCAGAAGGAGGAGGAGGAGGG
GCGGGGAAGCAGGTCGGCCGCAACAGCGGGCAGAGGACGCTTCGCCGTTG
ACTTAAGCAGAGATGATGATGAGGAGAACGTTGCGCCCGAAGCGGAAACA
TCAGGCCGGCGCGCACCAGAAGGCGGTGGTGGTGGTGGTGCTGCTACTGC
TGCTGCTGCGGGCGCGGGGTCGAGCTCTGCTTCTCCTTCTTGCACGGGGG
GGGCATCATGGCACTCCTCGCCACCGCGGCTCGGATACGAAGAAAGATCG
TCCTCATGTGGTGGCTTCGCAGGAGAGTTTGACGGTGAGGACTTGTTTGA
TGGTGGCGTGTACGTCTACTCGCCATCGCCCCCTCCAGCAGCAGCTGGAG
CTGGAGCTGGAGCAGCGAACAGCAGCGCTAGCGCTCCTAGCCCCGCGCCA
GAAGCTAGTGGGTCGAGCCCGGTCCGAAGCCAAGTAGTGGACCTGTCGTA
CTCATCGCCACCGTCTGGTCCGCTGTCCGCTGAACGGATGCGTGGTGAGC
TCGGTCGCAGAAGGGGCGGCCTCGCCTCTACGAGTCGGACCTCCGAAGAG
AAAAACAGCGGTGGCAATGTCTGTTCCGACGCTGATGATAACAATATCGA
CGCATTTGCCGACTGCGTAGACGTTGGACTATCCAGCCGTGGCAGCGGTG
CCGGCGCACACCACGGGGTAAATGTCGAGGAGGACGCTACCGGCGAGGGC
AGCGACGTCGACGTTGCGATGGTCGTTGCGGCCGGACCAAGCGCTCGGGG
GGCTGGGGCGGGCGCAGCTGGGGCGGGCGCAGGTGATCGGTCGACCGGAG
CCAGCGCTAGGGCGGTCACAGCTGGGGCGGCCGAGGCGGGCGCCCCTGGA
GCGAGTGCAGGTGGTCGGTACTTCAAACCGGGGGAGACTGGCGACTGGGA
GCGAGAAGCAAGCGGCTCGCGCTGGAAAATGGAGGCTGAGGGGCCGGCAG
GCGGGAGCGAGTCGGCGGCAGGGTCGGGGTTGGGTTCGGGGTCGGCGCGG
AAGGGAGGGCGCGGGTTGGTGGCTTTCTCAGTGCCGGCTGAGCTGTACAA
GAGGATGTATCCGCACCAGCGCACGGGGATTCGGTGGCTTTGGGGTCTGC
ACCAGGGGGACATGGGCGGTATCTTGGGGGACGACATGGGCCTGGGCAAG
ACGTTCCAGTGGACTATCCAGCCGTGGCAGCGGTGCCGGCGCACACCACG
GGGTAAATGTCGAGGAGGACGCTACCGGCGAGGGCAGCGACGTCGACGTT
GCGATGGTCGTTGCGGCCGGACCAAGCGCTCGGGGGGCTGGGGCGGGCGC
AGCTGGGGCGGGCGCAGGTGATCGGTCGACCGGAGCCAGCGCTAGGGCGG
TCACAGCTGGGGCGGCCGAGGCGGGCGCCCCTGGAGCGAGTGCAGGTGGT
CGGTACTTCAAACCGGGGGAGACTGGCGACTGGGAGCGAGAAGCAAGCGG
CTCGCGCTGGAAAATGGAGGCTGAGGGGCCGGCAGGCGGGAGCGAGTCGG
CGGCAGGGTCGGGGTTGGGTTCGGGGTCGGCGCGGAAGGGAGGGCGCGGG
TTGGTGGCTTTCTCAGTGCCGGCTGAGCTGTACAAGAGGATGTATCCGCA
CCAGCGCACGGGGATTCGGTGGCTTTGGGGTCTGCACCAGGGGGACATGG
GCGGTATCTTGGGGGACGACATGGGCCTGGGCAAGACGTTCCAGGTAACC
TGCTTCCTCGCGGGGCTTTTCTCCACGGATCAGGCGGCGAGCGCCCTCGT
GCTGGCTCCGAAGAGCGTGATGCGCGGCTGGGAGACGGAGTTGAAGCGGT
GGCTGGTCCGGGCTGCCTGTCCTCTGGCCGAGGTAACCTGCTTCCTCGCG
GGGCTTTTCTCCACGGATCAGGCGGCGAGCGCCCTCGTGCTGGCTCCGAA
GAGCGTGATGCGCGGCTGGGAGACGGAGTTGAAGCGGTGGCTGGTCCGGG
CTGCCTGTCCTCTGGCCGAGGTAGTCGTACTTGTGAGCGAAATGTCCGCG
AAGGCGAGGCGAAAGGCTATCCTTGAAGCGGCGGATGGAGGCGCCTTGGG
CCGAGGTGCCGTTCTGGTGACGACCTACGGCATGGTGTCGGCAAACCCGC
ACCACTTCGCTCCGCGAGGGGCCGAGCACAAGTGGGACTACGTGGTCCTT
GACGAGGGCCACAAGATCAAGAACTCATCCACGCGGTAGGTAGTCGTACT
TGTGAGCGAAATGTCCGCGAAGGCGAGGCGAAAGGCTATCCTTGAAGCGG
CGGATGGAGGCGCCTTGGGCCGAGGTGCCGTTCTGGTGACGACCTACGGC
ATGGTGTCGGCAAACCCGCACCACTTCGCTCCGCGAGGGGCCGAGCACAA
GTGGGACTACGTGGTCCTTGACGAGGGCCACAAGATCAAGAACTCATCCA
CGCGGTAG
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