mRNA_S-dermatodea_contig13692.2133.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig13692.2133.1
Unique NamemRNA_S-dermatodea_contig13692.2133.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig13692.2133.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 1.110e-74
Identity = 126/203 (62.07%), Postives = 157/203 (77.34%), Query Frame = 1 
Query:   43 MVQVCWTNSGAEGFIKALKFVELSASNMLAVTNLAICVNLALVVSSHRTMSRVKSVSSPQLVLVFLVIAVGAAAAAVPFWTNVAISGTLFWLFNPESEEEQNWISISQYFLEFGVGVCMAVIVALLLIFRLKEVNECWKIHRRIRYYFGLTVIGILVNVSLGICGTLYVMSDRTESLLISIHWVARHIHIALDTLVLYGVLGV 651
            MV VCW  S   GF+KALKF+EL ASNMLA+TNLAIC NLALV+ SHRT++RVKS SSP LV + L +++  A AA PFW    +SGT F + N E +   +W+++S++FLEF VG+CM VIVA LL+FR+ EV ECWK+H RIRYYFGLT+IG  VN++LG+CGT+YV+  R +SLLI + W  RHIHIALDT VLYGVLGV
Sbjct:    1 MVLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRN-EDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREKSLLIVLTWTFRHIHIALDTFVLYGVLGV 202
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BLAST of mRNA_S-dermatodea_contig13692.2133.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 8.270e-69
Identity = 122/213 (57.28%), Postives = 159/213 (74.65%), Query Frame = 1 
Query:   43 MVQVCWTNSGAEGFIKALKFVELSASNMLAVTNLAICVNLALVVSSHRTMSRVKSVSSPQLVLVFLVIAVGAAAAAVPFWTNVAISGTLFWLFNPESEEEQNWISISQYFLEFGVGVCMAVIVALLLIFRLKEVNECWKIHRRIRYYFGLTVIGILVNVSLGICGTLYVMSDRTESLLISIHWVARHIHIALDTLVLYGVLGVSSRRMDERAG 681
            M+ VCW     EGFIKALK++E ++SNMLA+TNLAIC+NLALVV+SHRT+SRV SVS+P LVL+FL I+V AAAA+VPFW+   +SGT FW+ N + + + +WI +S   LEF VG+CM +IV+ L+ FR++ + ECWK+H RIRYYF LTVIG  VN++LGI G  YV        L+S+ W  R+ H+ALDT+VLYGVLG  +R MDE  G
Sbjct:    8 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNAD-KAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYVFRANAGEYLLSLTWAFRYAHVALDTIVLYGVLG--TRHMDEGGG 217
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BLAST of mRNA_S-dermatodea_contig13692.2133.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 3.720e-65
Identity = 119/219 (54.34%), Postives = 160/219 (73.06%), Query Frame = 1 
Query:   43 MVQVCWTNSGAEGFIKALKFVELSASNMLAVTNLAICVNLALVVSSHRTMSRVKSVSSPQLVLVFLVIAVGAAAAAVPFWTNVAISGTLFWLFNPESEEEQNWISISQYFLEFGVGVCMAVIVALLLIFRLKEVNECWKIHRRIRYYFGLTVIGILVNVSLGICGTLYVMSDRTESLLISIHWVARHIHIALDTLVLYGVLGVSSRRMDERAGENKSSD 699
            MV VCWT S   GFIKA+KF+E  +SNM+A+T+LAICVNLAL+VSSHRT++RV+SVSSP L+ + L I++G  +  VP W  V + GT FW+ N + +   + + +S +FLEF VG+CM VI+A LL+FR+KEV ECW+I  RIRYYF LT++G  VN+ +GIC T++V+ D  E  L    WV+R+IH+ALDT VLYGVL    + MDER G  +SS+
Sbjct:   73 MVTVCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIVSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSD-QGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDEPRLAIWSWVSRYIHVALDTFVLYGVL--REKDMDERGGNARSSN 288
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BLAST of mRNA_S-dermatodea_contig13692.2133.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 9.440e-64
Identity = 122/224 (54.46%), Postives = 160/224 (71.43%), Query Frame = 1 
Query:   43 MVQVCWTNSGAEGFIKALKFVELSASNMLAVTNLAICVNLALVVSSHRTMSRVKSVSSPQLVLVFLVIAVGAAAAAVPFWTNVAISGTLFWLFNPESEEEQNWISISQYFLEFGVGVCMAVIVALLLIFRLKEVNECWKIHRRIRYYFGLTVIGILVNVSLGICGTLYVMSDRTESLLISIHWVARHIHIALDTLVLYGVLGVSSRRMDERAGENKSSDPQSAS 714
            MV VCW     E  IK +KFVEL++S+MLA+T+LAICVNLAL+VSSHRT+ RV+SVSSP L+ + L I++G  AA VP W  V + GT FW+ N + + + + + +S +FLEF VG+CM VIVA LL+FRLKEV ECW+IH RIRYY  LTV+G  +++S+GIC T++V+    ++ L    WV R+IHIALDT VLYGVL    + MDER G  + SD  S S
Sbjct:   24 MVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSD-QGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQTRLAIWAWVFRYIHIALDTFVLYGVL--REKDMDERVGNARPSDINSNS 244
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BLAST of mRNA_S-dermatodea_contig13692.2133.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 1.320e-60
Identity = 111/212 (52.36%), Postives = 150/212 (70.75%), Query Frame = 1 
Query:   43 MVQVCWTNSGAEGFIKALKFVELSASNMLAVTNLAICVNLALVVSSHRTMSRVKSVSSPQLVLVFLVIAVGAAAAAVPFWTNVAISGTLFWLFNPESEEEQNWISISQYFLEFGVGVCMAVIVALLLIFRLKEVNECWKIHRRIRYYFGLTVIGILVNVSLGICGTLYVMSDRTESLLISIHWVARHIHIALDTLVLYGVLGVSSRRMDERA 678
            M+ VCW       FIK LKF+EL ASNMLA+TNLAICVNL+L+V S R  S VKS+S+ +LVL+FL ++ G AA AVPFW    +SGT FW    E++ +  ++ IS + +EF VG+CM VIV+ LL+FR+ E+ ECW +H  +RYYFGLT++G + N++LG+CGT+YV+SD    LL+   W  R + IALDT+VL+ VL   S  +DERA
Sbjct:    1 MISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELG-ENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVISDMAWPLLMIFSWGFRQVRIALDTIVLHSVLATKS--VDERA 209
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BLAST of mRNA_S-dermatodea_contig13692.2133.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 3.800e-60
Identity = 107/189 (56.61%), Postives = 139/189 (73.54%), Query Frame = 1 
Query:    1 SGAVHQVVQTFLAAMVQVCWTNSGAEGFIKALKFVELSASNMLAVTNLAICVNLALVVSSHRTMSRVKSVSSPQLVLVFLVIAVGAAAAAVPFWTNVAISGTLFWLFNPESEEEQNWISISQYFLEFGVGVCMAVIVALLLIFRLKEVNECWKIHRRIRYYFGLTVIGILVNVSLGICGTLYVMSDRTE 567
            SG +HQ+V    A MV VCW        IK LKF EL+ASNMLA+TNLAICVNLAL+V SHRT+SRV+S S+P L+LVFL +++G AA +VPFWT + +SGT FW+   E +   +WI ++ +F+EF VG+CM VIV  L+IFR  E+ + WK+H RIRYYFGLT+I   VN++LGICGT+YV+ D  E
Sbjct:   85 SGLLHQLVFMTEATMVSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHE-QAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGDMKE 272
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BLAST of mRNA_S-dermatodea_contig13692.2133.1 vs. uniprot
Match: A0A6H5JWL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWL8_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 1.840e-57
Identity = 110/218 (50.46%), Postives = 147/218 (67.43%), Query Frame = 1 
Query:   43 MVQVCWTNSGAEGFIKALKFVELSASNMLAVTNLAICVNLALVVSSHRTMSRVKSVSSPQLVLVFLVIAVGAAAAAVPFWTNVAISGTLFWLFNPESEEEQNWISISQYFLEFGVGVCMAVIVALLLIFRLKEVNECWKIHRRIRYYFGLTVIGILVNVSLGICGTLYVMSDRTESLLISIHWVARHIHIALDTLVLYGVLGVSSRRMDERAGENKSS 696
            MV  C+  +   G IK + FV +++SNMLA TNL IC+NLAL+VSSHRTM+RVK+VSSP+++ + L+++   AAA VP W    + GT FW  N +  +  ++I +S Y +EF VG+CM VIV  L +FR+ E+ ECW+ H RIRYYF LT+ G  VN+ LGICG  YV  DR E L     W+ R+IHI+ DTLVLYG L   S  +DERA  ++SS
Sbjct:   23 MVSACYAATNLVGLIKTINFVMMTSSNMLAATNLGICINLALIVSSHRTMTRVKTVSSPRVLFIMLLVSASLAAATVPLWETTVVLGTHFWFTNSDPVKN-DFIIMSIYIIEFLVGICMLVIVFWLAMFRMTEIKECWRFHSRIRYYFCLTLFGTAVNLGLGICGAAYVFGDRKEPLPQIWSWLFRYIHISFDTLVLYGALREGS--IDERAEADRSS 237
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BLAST of mRNA_S-dermatodea_contig13692.2133.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 3.250e-57
Identity = 103/173 (59.54%), Postives = 133/173 (76.88%), Query Frame = 1 
Query:   43 MVQVCWTNSGAEGFIKALKFVELSASNMLAVTNLAICVNLALVVSSHRTMSRVKSVSSPQLVLVFLVIAVGAAAAAVPFWTNVAISGTLFWLFNPESEEEQNWISISQYFLEFGVGVCMAVIVALLLIFRLKEVNECWKIHRRIRYYFGLTVIGILVNVSLGICGTLYVMSDR 561
            M+ VCW     EGFIKALK++E ++SNMLA+TNLAIC+NLALVV+SHRT+SRVKSVS+P LVL+FL I+V AAAA+VPFW+   +SGT FW+ N + + + +WI +S   LEF VG+CM VIV+ L+ FR++ + ECWKIH RIRYYF LT+I   VN++LGI G  YV  D 
Sbjct:    1 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNAD-KAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYVFRDN 172
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BLAST of mRNA_S-dermatodea_contig13692.2133.1 vs. uniprot
Match: A0A6H5KRY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY2_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 2.670e-54
Identity = 99/174 (56.90%), Postives = 132/174 (75.86%), Query Frame = 1 
Query:   43 MVQVCWTNSGAEGFIKALKFVELSASNMLAVTNLAICVNLALVVSSHRTMSRVKSVSSPQLVLVFLVIAVGAAAAAVPFWTNVAISGTLFWLFNPESEEEQN--WISISQYFLEFGVGVCMAVIVALLLIFRLKEVNECWKIHRRIRYYFGLTVIGILVNVSLGICGTLYVMSD 558
            M+ VCW        IK LKF+EL+++NMLAVTNLAICVNLALVV SHRT+SRV S+SSP+++ + LV+AVG AAAAVP W  + ++GT F   +P SE++Q+  W  +S++  EF VG+CM  IVA LL+FR+KE+ ECWK+H RIRYYFGLT+I   VN+ LGI GT+Y++ +
Sbjct:    1 MISVCWAGGNLSNLIKFLKFLELASANMLAVTNLAICVNLALVVMSHRTLSRVSSLSSPRVIWLSLVLAVGGAAAAVPSWKTIILTGTYF---SPYSEDKQDLDWSVVSRFLFEFIVGICMIAIVAWLLLFRMKEIKECWKVHTRIRYYFGLTLIATGVNLVLGIFGTVYIVGE 171
[Close]
BLAST of mRNA_S-dermatodea_contig13692.2133.1 vs. uniprot
Match: D8LNM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 9.840e-54
Identity = 102/180 (56.67%), Postives = 135/180 (75.00%), Query Frame = 1 
Query:   37 AAMVQVCWTNSGAEGFIKALKFVELSASNMLAVTNLAICVNLALVVSSHRTMSR-VKSVSSPQLVLVFLVIAVGAAAAAVPFWTNVAISGTLFWLFNPESEEEQ--NWISISQYFLEFGVGVCMAVIVALLLIFRLKEVNECWKIHRRIRYYFGLTVIGILVNVSLGICGTLYVMSDRTE 567
            A M+ VCWT +     IK  KF+EL++ NMLA+TNLAIC+NLALVV SH      V S+SSP L++V LVI++GAAAAA PFW  + +SGT F+   PE+E ++  +WI+IS+++LEF VG+CM VIVA LL+FR+ E+ ECWK+H RIRYYFGLT+I   VN+ LGICG +Y++ DR E
Sbjct:    3 ATMISVCWTGANLIKLIKTFKFLELASVNMLAMTNLAICMNLALVVMSHGDQQPGVNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFF---PETENQRGSDWITISRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKMHARIRYYFGLTLIATGVNLILGICGVIYLIGDREE 179
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13692.2133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LNN1_ECTSI1.110e-7462.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K8K6_9PHAE8.270e-6957.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTK5_ECTSI3.720e-6554.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTK4_ECTSI9.440e-6454.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNP0_ECTSI1.320e-6052.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LNM4_ECTSI3.800e-6056.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWL8_9PHAE1.840e-5750.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNN2_ECTSI3.250e-5759.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRY2_9PHAE2.670e-5456.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNM5_ECTSI9.840e-5456.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13692contigS-dermatodea_contig13692:1755..6616 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size2314
Cds size789
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13692.2133.1prot_S-dermatodea_contig13692.2133.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig13692 1797..5133 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924294.2024853-UTR-S-dermatodea_contig13692:1754..17961622924294.2024853-UTR-S-dermatodea_contig13692:1754..1796Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13692 1755..1796 +
1694079157.4374762-UTR-S-dermatodea_contig13692:1754..17961694079157.4374762-UTR-S-dermatodea_contig13692:1754..1796Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13692 1755..1796 +
1622924294.2498543-UTR-S-dermatodea_contig13692:5133..66161622924294.2498543-UTR-S-dermatodea_contig13692:5133..6616Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13692 5134..6616 +
1694079157.4851537-UTR-S-dermatodea_contig13692:5133..66161694079157.4851537-UTR-S-dermatodea_contig13692:5133..6616Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13692 5134..6616 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924294.2140372-CDS-S-dermatodea_contig13692:1796..19311622924294.2140372-CDS-S-dermatodea_contig13692:1796..1931Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13692 1797..1931 +
1694079157.4500217-CDS-S-dermatodea_contig13692:1796..19311694079157.4500217-CDS-S-dermatodea_contig13692:1796..1931Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13692 1797..1931 +
1622924294.2226288-CDS-S-dermatodea_contig13692:2770..29291622924294.2226288-CDS-S-dermatodea_contig13692:2770..2929Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13692 2771..2929 +
1694079157.4578886-CDS-S-dermatodea_contig13692:2770..29291694079157.4578886-CDS-S-dermatodea_contig13692:2770..2929Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13692 2771..2929 +
1622924294.231354-CDS-S-dermatodea_contig13692:3475..37051622924294.231354-CDS-S-dermatodea_contig13692:3475..3705Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13692 3476..3705 +
1694079157.4676902-CDS-S-dermatodea_contig13692:3475..37051694079157.4676902-CDS-S-dermatodea_contig13692:3475..3705Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13692 3476..3705 +
1622924294.2409656-CDS-S-dermatodea_contig13692:4868..51331622924294.2409656-CDS-S-dermatodea_contig13692:4868..5133Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13692 4869..5133 +
1694079157.4765725-CDS-S-dermatodea_contig13692:4868..51331694079157.4765725-CDS-S-dermatodea_contig13692:4868..5133Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13692 4869..5133 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig13692.2133.1

>prot_S-dermatodea_contig13692.2133.1 ID=prot_S-dermatodea_contig13692.2133.1|Name=mRNA_S-dermatodea_contig13692.2133.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=263bp
MVQVCWTNSGAEGFIKALKFVELSASNMLAVTNLAICVNLALVVSSHRTM
SRVKSVSSPQLVLVFLVIAVGAAAAAVPFWTNVAISGTLFWLFNPESEEE
QNWISISQYFLEFGVGVCMAVIVALLLIFRLKEVNECWKIHRRIRYYFGL
TVIGILVNVSLGICGTLYVMSDRTESLLISIHWVARHIHIALDTLVLYGV
LGVSSRRMDERAGENKSSDPQSASAGNGSSAHHYNRRTGYLGNGNAHRKV
HSSHSSSTNTLS*
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mRNA from alignment at S-dermatodea_contig13692:1755..6616+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig13692.2133.1 ID=mRNA_S-dermatodea_contig13692.2133.1|Name=mRNA_S-dermatodea_contig13692.2133.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4862bp|location=Sequence derived from alignment at S-dermatodea_contig13692:1755..6616+ (Saccorhiza dermatodea SderLu1190fm monoicous)
AGCGGGGCTGTTCATCAGGTAGTGCAGACGTTTTTGGCGGCCATGGTCCA
AGTGTGCTGGACCAATTCAGGGGCAGAAGGCTTTATCAAGGCATTGAAAT
TTGTGGAGCTGTCGGCGTCGAACATGCTGGCGGTGACCAACCTCGCCATC
TGCGTCAACCTTGCCCTCGTCGTGTCGGTGCGTTGATAATGTGTCGATAA
GTCAGCTATGACTCAGTTACCCTTTTTGAAGGAGACAAGTGGCTAACTTC
AAACCTCAAAGGATAGACCGTAGACGCTAAGCATGTTGTTGGACTTCGAG
GAGTTTCTCCCGAAGACGAAGTATTTCCGCACCGTCTCAGTTAGGGGCCG
TTCTTTCTTTGTGCACCTGCCGCGGGTAGGACGAAGATGTCGCATTCCCT
CTCGGATTGGTTCCGTTGGACGCTCAACCACGCAAGGGACGCGGGTAGGG
TTGATGTACGACGGCATGCATGCTGACGATGCCCGGCATGCTCGCACCAC
GCCGAGAACCATCTTCGAGCCCCACTTCCCATGCGGATGAAGAAGCTGTT
GACCTTGTTGCCGAGCATGGTAGAGACGCCTCGATTTCGTGGACGTACCT
GGTGCTCTAGGGCCACAGAAAACGCGTCTATTAAATTGTCACAAGAAACA
GTCTCTAGGAAAACATGGAAGCCACTGAAGATGTAGATCAGTGGCTGTAG
TGTCGCTGTCCGACGTGGCCCTTTCAAGCTGCAATAGTTCGGATCTCGTC
AAGTCCCCCCCCCAAGCACGTACCCACGTGTACGAGGTCAGGACCCACTG
GTATGTTGGAAGGCGCTCGGCTGCGACGTTTGTAGCTGACGCGCTGGTTG
TTGGCACCATGCCCGTGCAACCCCCCCTCCGGCTGAAGAGTACTTATAAA
CACAGCGCTATTCGTCCTGATGCCAACAAATCAACCAACAAGCCCGAGGC
CGCAAATCGGCAATCCATCCGCTCATAACCGCACTCTTCTTGTTGGTTCC
GTCCGTCCTCCGGCAGAGTCATCGCACGATGTCTCGTGTGAAGAGCGTGA
GCTCTCCTCAGCTTGTGCTGGTGTTCTTGGTGATCGCGGTCGGGGCCGCC
GCCGCCGCCGTACCGTTCTGGACGAATGTTGCCATCAGCGGGACTCTGTT
CTGGTTGTTTAACCCAGAGAGCGAGGTATGTATGCATTCTGCGTGTCTTC
AGTAGCTGACTCCGGTCGCGGTCTCCCTTTGGTACTGCTCTATAGATATC
CAGGGATTTGCTTTGAAGAGGAGCAGGAGGGATGAGTGAGGTCTACAGTG
CCGTTGCTGCTCGCTTTGTTTGACCCCAACTGCCGCATTCACTGGCTTCG
CCACCGCGTTCGTTGACTGGGAATACTGTGGCTACGTATGGGTCCTCCCA
AATGGACCAGGCGGGTAGAAGTGGTGTCCCTTTTCATTACGCAAATTTGA
GCGCAAAAAATACGCTAACATGTTTTTAAGTGGCAGTACAGTACGTTTCG
TTGCGTCATCAGGCCGGTGGAGTGGGGTTCTTAAAGCCCCTGAGTTGCAA
CCTTCTTGAGGCCCGTTAACCTGTGGCAAAGTGGGACGCCACCGCGTATT
CAGACGCCCTGCCCCTCTTGCCGACATGTACCCGTAGCTACCTCCATTCA
TGCCAACGCCCGGTTTTAGCCACCTTCACTTGTTACCCTTGGTACCCTTG
CAATCTGTACTGGTAATACAGGAGGAGCAAAACTGGATAAGTATTTCCCA
GTACTTCCTGGAGTTCGGGGTAGGCGTGTGCATGGCAGTGATCGTGGCGC
TGCTTCTGATTTTCCGACTGAAAGAGGTGAACGAGTGCTGGAAAATTCAC
CGCCGCATTCGCTATTACTTCGGGCTGACCGTCATCGGCATCCTCGTCAA
CGTCTCTCTCGGCATATGCGGGACGCTCTACGTCATGTCCGACCGCACGG
AGTGAGTGCTGTTGGATGATATCGATTGCAAAAATATTTGGGCAAGCTAC
CGCCTGTTGGAAGCTGACACCAAACAAAACTCAGATCACCCACGTGCACT
CATATCAGCGGGCAGCCCAGGGATTTAATCGCCAGTACCACCAGTTAGAC
CTAGCTCTAATAGTAAATGTAAGAAGTCACGTTTTTCGATGCCATGTACT
AGACAGTACTCGTTTGGTGCGAGAGGTTGAACGGATAGATATCAACACCG
GATACAAACCTGTAGGTTCCAGCCGTTTTGTTAACCGGTTATGGGTTTCC
AGGTTCACCGGTTTAGGAGAATTTCCTGTGGGTTTTTGCCTCATGCTGAA
AGCCGTTAACCGGTCAACGGGTCGACCGGAACAGCCTGTAAAAGTGGTCG
TTTTCGCCAAGGTTCGTCCATGTTAGCTTGTAGCATTGCGTGAATCTTCT
CGCTTGGCTTCTTTCGCTAATAATGATAGGAACATGACATAGTCGTGGTC
ACATGGTCACAAAGAAGACGGAACGACAGGAGCAGTGTGTAGAGTGTAGA
ACGAGAACAAGTACCAACCACCTTCCCGGAAGGAATGCAATACATGCAAC
CTCGCCGGCTGAGTGCCTGGTTCCTGAAGGTTAACGGTGTATACATGTCC
ATTGCGAACAACCTCGACGTTACCCGACTCGACGGCTCGACGAGCTCGAG
TCTGAATAATTCGCCTGCCTTTCCCGAAACTGGGTTGTAGCTATCATTCG
CGTGTTGGGCTTGTTGTATGCTATGCTATTCATAGTTGTTGTGGGACACT
TACGCTTAGTTGAACTTTAGCTTTTTGATCGCTCAAACCGTAAACTCCGG
TTTACCGTTTAGAAAAGTATCACCGTTTGACACTTTTTTTCTCTCGAGAT
CACCCAGTTAACCGGTTCCGTTTTTTTCTATTCGGTGTACGATACACCCC
TATGAACGAACTACAAATACCGGCTTCACCGCATTTCCCACACATGGCGG
CTAAATAGAATCAAACGCGTCTACCATTGGTCGCGCGCTTCTCTCTCGGG
AGGAGGCATGCATGGGACTATGGACGGGACTATTCGGTAGCAACTATTCA
ACCTCATGGCCATTTACTCAATCGGTCCACGCGCCCAATCTCCCAACCCA
TGGCTCGTCTTTAGGTCACTGCTCATCTCGATCCATTGGGTTGCGCGGCA
CATTCACATCGCCCTCGACACTCTGGTGCTGTACGGTGTGCTTGGGGTGT
CTTCCCGACGCATGGACGAGCGCGCCGGCGAGAATAAATCTTCGGATCCC
CAGTCAGCCTCAGCCGGCAACGGAAGCTCTGCCCACCATTACAACCGGCG
GACTGGCTACCTCGGAAACGGAAACGCCCACCGCAAGGTTCACTCCAGCC
ACTCCTCCTCCACGAATACACTTTCGTGATACAGCCATGGGACTCAATTT
CGGGGAAATCGGCGTGGATCGGCTCCATTTCGCTTAACTCTCTGAAAGCG
AGCGCCTGCCTTTCGTCTGCGCATGGCGGAGGGGCGAGAGCGAGAGCACA
TTGGTGCTGTTTCACGGCGTTGCTACGCTCGCGGCAGTCTTTTCGGTAGG
CCAGTGGAACGATAAACTCCCGCGGCGGACTGCTAGCCACAACTCCGCGC
AGCTGTTGGCCTTTTGTTTTTTCGAATCTGGTTGACGTCGCCGCCGAGTC
ACCCTTCATGGAGGAAAAGAGCTGACTGCTCTCCGTCGTCCGTGGCCTAC
GCACGGCAGTGTGAGGGTGGTGGGGGCTCGTGAGGTTTGTGAGTCATTCG
CGGCAATGTGACGCGTTTGTTAGACAGCGTTACGTTGTTGTTGTTGTGCT
CGGTACGAGGGGCGAGCCTGTTTTTATTCGCTTGCTTGCGTGCAGGCGTC
CTCAACCAGTGCATGGAGAGGGAAAAGCTCTGAGTTTTATTTTAATTTTT
TTAATGGTGGCTTGTGGTTAGAGTGTTGTGTTCGCTATGATAAGTCGACG
GTGCACCTCATTCAAATCGAGCATGTAGTGCACGTTGAATGGCTTTAAGC
ACGCCCGTAATGGGAGTAGTTTCGACCCATGGTCCAGGTGTGATACAGGG
CCGACGTGGGGACGTGGATGTACTATACCCATGTAAGGTCATATATGTTT
TCCCTTTTTTTTTCCATCACACCGGGCGACTGTGCGTCCAAACGACTTCG
GCATTTATTTTCCGTTTGTCGACCGCAGACAGTAGATGGAAGAGCGGCAG
GGTTGAGTCGTTAATCTGCTTTCATCATAGTGTTGCGCATGAATAATTGA
TAACCTGGTATTATGCCGGCATGGCACCAACCACGTATGGCACGAACTGG
GCTCCGTACGGTGCCGTCTCGCTTTCTTTCTTAAAGGCTGACGATGTACG
TACATCGATCTGCGATCGATTTATATAGTAGACAGCGGTAAGGCAGGATA
GCGGCACGTCTACATGCCCAAGTCTTCACACGTCGACGTCTCGGCGTGCG
ATAGTAGGAATCATTCCGGCACCGCGCATTGGGCGTCCGCCAACGGTGGC
CAGGGGCAGGCCACGCGGCTACCCTCTGTTACCAGGGTTGCTGTGCGTAT
ACCGATGCGTCCTGTTTAGGTGTTTTGTACAGTCTCGCACAGTCGGCAAC
GTGAGCAGTTGCCAGCTCTTGCTTTTTGTGACGCCATACGGTAGAGACCG
AGCGTTTTTTTTTTGTCGTGTGGGTAAAGCTCGAGTACGGCCCTTGGTGT
GGTGGAAGGAGCGCGGGGTAGGTGTTGCTTACGTAGGGCACGGGTGTGAT
TATTGTCGTAGTGTAGCATGGTAGTGTTTATTGCGCGGCTCCAACGCTGG
ACGGTGCCGTCTGATTGGGTTTTCGTATTCCTTGCGTATTTTCACCCCCC
CACCTCTCGGTG
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Coding sequence (CDS) from alignment at S-dermatodea_contig13692:1755..6616+

>mRNA_S-dermatodea_contig13692.2133.1 ID=mRNA_S-dermatodea_contig13692.2133.1|Name=mRNA_S-dermatodea_contig13692.2133.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1578bp|location=Sequence derived from alignment at S-dermatodea_contig13692:1755..6616+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTCCAAGTGTGCTGGACCAATTCAGGGGCAGAAGGCTTTATCAAGGC
ATTGAAATTTGTGGAGCTGTCGGCGTCGAACATGCTGGCGGTGACCAACC
TCGCCATCTGCGTCAACCTTGCCCTCGTCGTGTCGATGGTCCAAGTGTGC
TGGACCAATTCAGGGGCAGAAGGCTTTATCAAGGCATTGAAATTTGTGGA
GCTGTCGGCGTCGAACATGCTGGCGGTGACCAACCTCGCCATCTGCGTCA
ACCTTGCCCTCGTCGTGTCGAGTCATCGCACGATGTCTCGTGTGAAGAGC
GTGAGCTCTCCTCAGCTTGTGCTGGTGTTCTTGGTGATCGCGGTCGGGGC
CGCCGCCGCCGCCGTACCGTTCTGGACGAATGTTGCCATCAGCGGGACTC
TGTTCTGGTTGTTTAACCCAGAGAGCGAGAGTCATCGCACGATGTCTCGT
GTGAAGAGCGTGAGCTCTCCTCAGCTTGTGCTGGTGTTCTTGGTGATCGC
GGTCGGGGCCGCCGCCGCCGCCGTACCGTTCTGGACGAATGTTGCCATCA
GCGGGACTCTGTTCTGGTTGTTTAACCCAGAGAGCGAGGAGGAGCAAAAC
TGGATAAGTATTTCCCAGTACTTCCTGGAGTTCGGGGTAGGCGTGTGCAT
GGCAGTGATCGTGGCGCTGCTTCTGATTTTCCGACTGAAAGAGGTGAACG
AGTGCTGGAAAATTCACCGCCGCATTCGCTATTACTTCGGGCTGACCGTC
ATCGGCATCCTCGTCAACGTCTCTCTCGGCATATGCGGGACGCTCTACGT
CATGTCCGACCGCACGGAGAGGAGCAAAACTGGATAAGTATTTCCCAGTA
CTTCCTGGAGTTCGGGGTAGGCGTGTGCATGGCAGTGATCGTGGCGCTGC
TTCTGATTTTCCGACTGAAAGAGGTGAACGAGTGCTGGAAAATTCACCGC
CGCATTCGCTATTACTTCGGGCTGACCGTCATCGGCATCCTCGTCAACGT
CTCTCTCGGCATATGCGGGACGCTCTACGTCATGTCCGACCGCACGGAGT
CACTGCTCATCTCGATCCATTGGGTTGCGCGGCACATTCACATCGCCCTC
GACACTCTGGTGCTGTACGGTGTGCTTGGGGTGTCTTCCCGACGCATGGA
CGAGCGCGCCGGCGAGAATAAATCTTCGGATCCCCAGTCAGCCTCAGCCG
GCAACGGAAGCTCTGCCCACCATTACAACCGGCGGACTGGCTACCTCGGA
AACGGAAACGCCCACCGCAAGGTTCACTCCAGCCACTCCTCCTCCACGAA
TACACTTTCGTGAGTCACTGCTCATCTCGATCCATTGGGTTGCGCGGCAC
ATTCACATCGCCCTCGACACTCTGGTGCTGTACGGTGTGCTTGGGGTGTC
TTCCCGACGCATGGACGAGCGCGCCGGCGAGAATAAATCTTCGGATCCCC
AGTCAGCCTCAGCCGGCAACGGAAGCTCTGCCCACCATTACAACCGGCGG
ACTGGCTACCTCGGAAACGGAAACGCCCACCGCAAGGTTCACTCCAGCCA
CTCCTCCTCCACGAATACACTTTCGTGA
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