mRNA_S-dermatodea_contig13684.2128.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig13684.2128.1 vs. uniprot
Match: D7FT91_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT91_ECTSI) HSP 1 Score: 221 bits (563), Expect = 1.140e-66 Identity = 134/184 (72.83%), Postives = 145/184 (78.80%), Query Frame = 1
Query: 1 VDLRSATELERDELIHAEVYKGFVNVGGTSEHGTGVWEGPAWDEATMGDESKDTVREEGN---GACGNGXXXXXXXXSRRR---------YFVSLIDEGMYKKGVFQRLRRRHKAAVLALAPAAMLSRRVTQKARGIFLKEINAGGLVLLNELLLQYSGEGINRVLRLLASRERHPVALYCTAG 516
VDLRSATEL DELIH +VY+GFVNVGG GTGV +GPAWDEA G ES D + +G + G GXXXXXXXX YFVSLIDE +YKKGVFQRLRRRHKAAVLALAPA M+SRR TQKARGIFL+EINAGGLVLLNELLLQYSG+GINRVLRLLAS+E HPVALYCTAG
Sbjct: 257 VDLRSATELGHDELIHGDVYEGFVNVGGGDHSGTGVSQGPAWDEAIQG-ESNDALPVQGKVGGASAGAGXXXXXXXXXXXXXXXXXXXXXYFVSLIDESIYKKGVFQRLRRRHKAAVLALAPATMVSRRCTQKARGIFLREINAGGLVLLNELLLQYSGDGINRVLRLLASKEHHPVALYCTAG 439
BLAST of mRNA_S-dermatodea_contig13684.2128.1 vs. uniprot
Match: A0A4D9D8L3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8L3_9STRA) HSP 1 Score: 107 bits (268), Expect = 9.320e-26 Identity = 53/96 (55.21%), Postives = 72/96 (75.00%), Query Frame = 1
Query: 229 RRYFVSLIDEGMYKKGVFQRLRRRHKAAVLALAPAAMLSRRVTQKARGIFLKEINAGGLVLLNELLLQYSGEGINRVLRLLASRERHPVALYCTAG 516
+R+F+S+IDE +Y++GVF+RL +R KAA L L +S+R ++AR IFL IN GL LLN+LLL YSG + RVL LL+ +ER+P+ALYCTAG
Sbjct: 42 QRHFISVIDESIYQRGVFKRLAKRKKAAALFLITGGAVSKRARRRARSIFLNYINDAGLPLLNDLLLNYSGPALRRVLELLSDKERYPIALYCTAG 137
BLAST of mRNA_S-dermatodea_contig13684.2128.1 vs. uniprot
Match: W7TPH7_9STRA (Tyrosine-protein phosphatase family, C-terminal domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPH7_9STRA) HSP 1 Score: 110 bits (274), Expect = 2.570e-25 Identity = 54/96 (56.25%), Postives = 73/96 (76.04%), Query Frame = 1
Query: 229 RRYFVSLIDEGMYKKGVFQRLRRRHKAAVLALAPAAMLSRRVTQKARGIFLKEINAGGLVLLNELLLQYSGEGINRVLRLLASRERHPVALYCTAG 516
+R+F+S+IDEG+Y++GVF+RL +R KAA L L +S+R ++AR IFL IN GL LLN+LLL YSG + RVL LL+ +ER+P+ALYCTAG
Sbjct: 226 QRHFISVIDEGIYQRGVFKRLAKRKKAAALFLITGGAVSKRARRRARSIFLNYINDAGLPLLNDLLLNYSGPALRRVLELLSDKERYPIALYCTAG 321
BLAST of mRNA_S-dermatodea_contig13684.2128.1 vs. uniprot
Match: A0A7S2UX35_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX35_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.590e-23 Identity = 69/194 (35.57%), Postives = 102/194 (52.58%), Query Frame = 1
Query: 1 VDLRSATELERDELIHAEVYKGFVNVGGTSEHGTGVWE----------------------GPAWDEATMGDESKDTVREEGNGACGNGXXXXXXXXSRRRYFVSLIDEGMYKKGVFQRLRRRHKAAVLALAPAAMLSRRVTQKARGIFLKEINAGGLVLLNELLLQYSGEGINRVLRLLASRERHPVALYCTAG 516
+DLRS E++ D+ +++ F +V T + WE AW+ E ++ REE A + +RYF+SL++E +YKKGV RL R KAA + A++S R ++AR + LK++N GGL LLNELLL SG+G+ R L++LA+ ER PVA++CTAG
Sbjct: 114 IDLRSPREID-DDKHEGSIFESFQSVDWTEDQQRRKWERRSKRSRAKYLVQRAAMELQGKAAAWNYRKKMSEKREKEREETMRA-----------KASQRYFISLMNESLYKKGVISRLGNRQKAAAVMYLAGAVVSTRAYKRARSLVLKKVNEGGLGLLNELLLSKSGKGVCRTLKILATPERLPVAIHCTAG 295
BLAST of mRNA_S-dermatodea_contig13684.2128.1 vs. uniprot
Match: A0A7S2EB38_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EB38_TRICV) HSP 1 Score: 96.7 bits (239), Expect = 1.970e-21 Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 226 RRRYFVSLIDEGMYKKGVFQRLRRRHKAAVLALAPAAMLSRRVTQKARGIFLKEINAGGLVLLNELLLQYSGEGINRVLRLLASRERHPVALYCTAG 516
R R+FVS+++E Y +G +LR+R L +PAA +SRR + FL+EIN GGL +LNELLL++ GI RVL L A R RHPVA YCTAG
Sbjct: 45 RERHFVSIMNEFKYVRGTLSKLRKRDVVRALLQSPAATVSRRARDDIKAPFLREINDGGLSMLNELLLRFGAPGIKRVLDLCADRSRHPVAFYCTAG 141
BLAST of mRNA_S-dermatodea_contig13684.2128.1 vs. uniprot
Match: A0A7S2NYU5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NYU5_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 4.390e-21 Identity = 51/97 (52.58%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 226 RRRYFVSLIDEGMYKKGVFQRLRRRHKAAVLALAPAAMLSRRVTQKARGIFLKEINAGGLVLLNELLLQYSGEGINRVLRLLASRERHPVALYCTAG 516
+ R+FVSL+DE Y +G +LR+R A + +P A++S+RV + IFL EINAGGL LLNEL+L+ +G GI VL L A + RHPVA YCTAG
Sbjct: 190 KERHFVSLMDEIKYVRGTLSKLRKRDIAKAVLKSPGAVVSKRVRGNVKSIFLDEINAGGLPLLNELVLKMAGPGIKYVLDLCADKSRHPVAFYCTAG 286
BLAST of mRNA_S-dermatodea_contig13684.2128.1 vs. uniprot
Match: A0A7S2XMM4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMM4_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 7.420e-21 Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 226 RRRYFVSLIDEGMYKKGVFQRLRRRHKAAVLALAPAAMLSRRVTQKARGIFLKEINAGGLVLLNELLLQYSGEGINRVLRLLASRERHPVALYCTAG 516
+ R+FVSL++E Y +G +LR R A VL +P A++S RV ++ + IFL EIN GGL +LNELLL++ GI VL L+A + RHPVA YCTAG
Sbjct: 265 KERHFVSLMNELKYVRGTLSKLRMRDIANVLIKSPGAIVSSRVREECKDIFLDEINEGGLPMLNELLLRFGAPGIRHVLELMADKSRHPVAFYCTAG 361
BLAST of mRNA_S-dermatodea_contig13684.2128.1 vs. uniprot
Match: A0A1E7FVC3_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVC3_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 3.020e-20 Identity = 65/192 (33.85%), Postives = 98/192 (51.04%), Query Frame = 1
Query: 1 VDLRSATELERDELIHAEVYKGFVNV----------GGTSEHGTGV----------WEGPAWDEATMGDESKDTVREEGNGACGNGXXXXXXXXSRRRYFVSLIDEGMYKKGVFQRLRRRHKAAVLALAPAAMLSRRVTQKARGIFLKEINAGGLVLLNELLLQYSGEGINRVLRLLASRERHPVALYCTAG 516
VDLRS TEL D+ + A++++GF ++ G E GV ++ D+ +E V + G + R+FVSL++E Y +G ++R+R A + AP A LS+R+ + F+ EIN+GGL++LN+LLL++ GI VL L A +RHPVA YCTAG
Sbjct: 131 VDLRSPTELRDDDALMADIFRGFTDLVWIENGRRRDGCLKELKPGVSPVEKSRKSRFKKGGDDDVVSAEEEMCDVGCDDPQTVPAGRSLTKSGDRKERHFVSLMNEFKYVRGTVTKVRKRDIAKAIIKAPGAFLSKRIWNSLKEPFITEINSGGLIMLNDLLLRFGAPGIKYVLDLCAESDRHPVAFYCTAG 322
BLAST of mRNA_S-dermatodea_contig13684.2128.1 vs. uniprot
Match: A0A448ZIR0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZIR0_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 6.450e-20 Identity = 70/196 (35.71%), Postives = 98/196 (50.00%), Query Frame = 1
Query: 1 VDLRSATELERDELIHAEVYKGFVNV----------GGTSEHGTGVWEGPAWDEATMG----DESKDTVREEGNGACGNGXXXXXXXXSRR----------RYFVSLIDEGMYKKGVFQRLRRRHKAAVLALAPAAMLSRRVTQKARGIFLKEINAGGLVLLNELLLQYSGEGINRVLRLLASRERHPVALYCTAG 516
VDLRS TEL D+ + AE + GF N+ G E GV + + D S D E+ C G + R R+FVSL++E Y +G ++R+R A + AP A LS+R+ + F+ EIN+GGL++LN+LLL++ GI VL L+A +RHPVA YCTAG
Sbjct: 148 VDLRSPTELRDDDALMAECFDGFTNLVWIENGRRRDGCVRELAAGVSPVEKARKLRLSKKQLDASDDLAAEDE--MCEVGCDDPLTLPAERALTKSKDRNERHFVSLMNEFKYVRGTVTKVRKRDIAKAIIKAPGAFLSKRIWNSLKEPFITEINSGGLIMLNDLLLRFGAPGIKYVLDLVAESDRHPVAFYCTAG 341
BLAST of mRNA_S-dermatodea_contig13684.2128.1 vs. uniprot
Match: A0A836CH30_9STRA (Protein-tyrosine phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH30_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.490e-19 Identity = 63/172 (36.63%), Postives = 91/172 (52.91%), Query Frame = 1
Query: 1 VDLRSATELERDELIHAEVYKGFVNVGGTSEHGTGVWEGPAWDEATMGDESKDTVREEGNGACGNGXXXXXXXXSRRRYFVSLIDEGMYKKGVFQRLRRRHKAAVLALAPAAMLSRRVTQKARGIFLKEINAGGLVLLNELLLQYSGEGINRVLRLLASRERHPVALYCTAG 516
+DLRS EL D L+H+ VY + V ++ +G W +A + E + T + +++R+ +SLIDE Y G+ + KA ++AL A+ +SRR A + L+ I AGGL LLNE+LL G I R L+L+A +RHPVALYCTAG
Sbjct: 97 IDLRSPKELGMDTLMHSPVYAPYETVD-LNQESSGSWR-----QAVLSTEVETTAED--------------FTPTKQRFLLSLIDERKYVSGLVLQAEIIDKAWLVALIGASAVSRRARAHATEVLLERIKAGGLPLLNEMLLLQGGPQIARALKLIADADRHPVALYCTAG 248 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13684.2128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13684.2128.1 >prot_S-dermatodea_contig13684.2128.1 ID=prot_S-dermatodea_contig13684.2128.1|Name=mRNA_S-dermatodea_contig13684.2128.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=172bp VDLRSATELERDELIHAEVYKGFVNVGGTSEHGTGVWEGPAWDEATMGDEback to top mRNA from alignment at S-dermatodea_contig13684:508..3530- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig13684.2128.1 ID=mRNA_S-dermatodea_contig13684.2128.1|Name=mRNA_S-dermatodea_contig13684.2128.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3023bp|location=Sequence derived from alignment at S-dermatodea_contig13684:508..3530- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig13684:508..3530- >mRNA_S-dermatodea_contig13684.2128.1 ID=mRNA_S-dermatodea_contig13684.2128.1|Name=mRNA_S-dermatodea_contig13684.2128.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1032bp|location=Sequence derived from alignment at S-dermatodea_contig13684:508..3530- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |