mRNA_S-dermatodea_contig13674.2123.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig13674.2123.1
Unique NamemRNA_S-dermatodea_contig13674.2123.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig13674.2123.1 vs. uniprot
Match: A0A6H5K9U8_9PHAE (Autophagy-related protein 9 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9U8_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 3.120e-67
Identity = 118/142 (83.10%), Postives = 126/142 (88.73%), Query Frame = 1 
Query:    1 QFTVRRAFLEDVRSLRARLVLVGLAHVVLLPFLLLFMLVYFFLQNAQEWHSSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYEHATEFLMRFPRPVLASIMRVTRFVSGSVVAVLLVMTVLEVGVGVELVGWGEGWL 426
            +FT+R  FL+DVR+LRARLVLVGLAHVVLLPFLLLFM+VYFFLQNAQEWHSSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSY HA  FLMRFPRPVLAS+MRVTRFVSGSVVAVLLVMT LE  V + +  W    L
Sbjct:  248 KFTIRTQFLQDVRALRARLVLVGLAHVVLLPFLLLFMVVYFFLQNAQEWHSSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHANTFLMRFPRPVLASVMRVTRFVSGSVVAVLLVMTFLEDSVLLHVKVWDRNLL 389
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BLAST of mRNA_S-dermatodea_contig13674.2123.1 vs. uniprot
Match: D7FZF2_ECTSI (Autophagy-related protein 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF2_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 4.450e-66
Identity = 117/142 (82.39%), Postives = 126/142 (88.73%), Query Frame = 1 
Query:    1 QFTVRRAFLEDVRSLRARLVLVGLAHVVLLPFLLLFMLVYFFLQNAQEWHSSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYEHATEFLMRFPRPVLASIMRVTRFVSGSVVAVLLVMTVLEVGVGVELVGWGEGWL 426
            +FT+R  FL+DVR+L+ARLVLVGLAHVVLLPFLLLFM+VYFFLQNAQEWHSSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSY HA  FLMRFPRPVLAS+MRVTRFVSGSVVAVLLVMT LE  V + +  W    L
Sbjct:  257 KFTIRTQFLQDVRALKARLVLVGLAHVVLLPFLLLFMVVYFFLQNAQEWHSSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYVHANTFLMRFPRPVLASLMRVTRFVSGSVVAVLLVMTFLEDSVLLHVKVWDRNLL 398
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BLAST of mRNA_S-dermatodea_contig13674.2123.1 vs. uniprot
Match: A0A836CNL2_9STRA (Autophagy protein Apg9-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNL2_9STRA)

HSP 1 Score: 173 bits (438), Expect = 2.540e-47
Identity = 86/142 (60.56%), Postives = 107/142 (75.35%), Query Frame = 1 
Query:    1 QFTVRRAFLEDVRSLRARLVLVGLAHVVLLPFLLLFMLVYFFLQNAQEWHSSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYEHATEFLMRFPRPVLASIMRVTRFVSGSVVAVLLVMTVLEVGVGVELVGWGEGWL 426
            +FT+RR FLED  +L+ R + VGLA + L+PFLLLFM++YFFLQNAQEWH+SK YLGPREWSPLA WTFREFNELQH +++RM+GSY HA  +L  FP P+  S MR  RF+SG+ VAVLLV T +E  V + +  W    L
Sbjct:  434 KFTLRRDFLEDRAALQRRFLAVGLAQLALMPFLLLFMVMYFFLQNAQEWHASKDYLGPREWSPLANWTFREFNELQHIYDRRMAGSYRHANAYLSAFPAPIWGSAMRTLRFISGAFVAVLLVATAMEDSVLLHVKLWDRNLL 575
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BLAST of mRNA_S-dermatodea_contig13674.2123.1 vs. uniprot
Match: I2CRC3_NANGC (Autophagy-related protein 9 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRC3_NANGC)

HSP 1 Score: 139 bits (351), Expect = 1.790e-38
Identity = 70/142 (49.30%), Postives = 98/142 (69.01%), Query Frame = 1 
Query:    1 QFTVRRAFLEDVRSLRARLVLVGLAHVVLLPFLLLFMLVYFFLQNAQEWHSSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYEHATEFLMRFPRPVLASIMRVTRFVSGSVVAVLLVMTVLEVGVGVELVGWGEGWL 426
            +FT+RR FL D   LR R V VG+A + L+PFLL+FM++ FFLQNAQ W   K+YLGPR+WSPLA+W FRE+NEL H FE+R+  S+  A  +  + PRPVL  + R   +++GSVVAVLL+ T+++  + + +  W    L
Sbjct:    5 KFTLRRDFLSDEAGLRRRFVWVGVAQLALMPFLLVFMVIQFFLQNAQAWQQKKNYLGPRQWSPLAQWRFREYNELPHLFERRLRASHPFAALYTRQTPRPVLGVLARCLAYMTGSVVAVLLLFTLVDESIVLYVKVWDRNLL 146
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BLAST of mRNA_S-dermatodea_contig13674.2123.1 vs. uniprot
Match: A0A7S1U8L1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8L1_9STRA)

HSP 1 Score: 144 bits (362), Expect = 4.370e-37
Identity = 75/141 (53.19%), Postives = 101/141 (71.63%), Query Frame = 1 
Query:    4 FTVRRAFLEDVRSLRARLVLVGLAHVVLLPFLLLFMLVYFFLQNAQEWHSSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYEHATEFLMRFPRPVLASIMRVTRFVSGSVVAVLLVMTVLEVGVGVELVGWGEGWL 426
            FT+R  FL D   LR R +L G+AHV+L+PFLL+FML  FFLQ+AQEW +S +YLGPREWSPLAR  FREFNEL H FE+R++ +   AT++   F RP+LA+  R+  F+SG++VAVLLV T+++  + +    WG   L
Sbjct:  343 FTLRHEFLLDRDGLRRRFILAGIAHVILMPFLLVFMLALFFLQHAQEWRASNNYLGPREWSPLARCMFREFNELPHVFEERLARTIGPATDYQGSFSRPLLATAGRLLSFISGALVAVLLVFTLMDESILLYTKLWGRNLL 483
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BLAST of mRNA_S-dermatodea_contig13674.2123.1 vs. uniprot
Match: F0YN89_AURAN (Autophagy-related protein 9 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN89_AURAN)

HSP 1 Score: 140 bits (353), Expect = 3.080e-36
Identity = 69/123 (56.10%), Postives = 92/123 (74.80%), Query Frame = 1 
Query:    1 QFTVRRAFLEDVRSLRARLVLVGLAHVVLLPFLLLFMLVYFFLQNAQEWHSSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYEHATEFLMRFPRPVLASIMRVTRFVSGSVVAVLLVM 369
            +F VRRAFLE+  +LR R V  GL HV L+PF+ +FM ++FFL +AQEWH  K YLGPREWSP+A+W+FRE NEL H FE R++ S + A  ++  FPRPV+A++ R   FVSG++VAVLL +
Sbjct:  234 RFVVRRAFLENEMALRRRFVRAGLVHVALVPFVAVFMTMHFFLLHAQEWHDKKHYLGPREWSPVAQWSFRELNELPHVFETRLAASRKPANAYVSLFPRPVVATLARCVAFVSGALVAVLLAL 356
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BLAST of mRNA_S-dermatodea_contig13674.2123.1 vs. uniprot
Match: A0A7S3XNV8_HETAK (Autophagy-related protein 9 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNV8_HETAK)

HSP 1 Score: 139 bits (351), Expect = 3.250e-36
Identity = 69/124 (55.65%), Postives = 94/124 (75.81%), Query Frame = 1 
Query:   10 VRRAFLEDVRSLRARLVLVGLAHVVLLPFLLLFMLVYFFLQNAQEWHSSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYEHATEFLMRFPRPVLASIMRVTRFVSGSVVAVLLVMTVLE 381
            +RRAF EDV +LR RL   GL H++LLPF L+F+  + FL++AQEWH+  SYLGPREWS  ARW FREFNEL HFFE+RM+GSY++A  +L +F  P+     R  RFVSG+++ VLL++T+++
Sbjct:  394 LRRAFAEDVGALRRRLRTAGLVHLLLLPFALVFLATHTFLRHAQEWHAEGSYLGPREWSNYARWAFREFNELPHFFERRMAGSYKYANLYLAQFSSPLAQLAARGVRFVSGALLTVLLLLTLID 517
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BLAST of mRNA_S-dermatodea_contig13674.2123.1 vs. uniprot
Match: W7TMH9_9STRA (Autophagy-related protein 9 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMH9_9STRA)

HSP 1 Score: 140 bits (354), Expect = 3.590e-36
Identity = 70/142 (49.30%), Postives = 99/142 (69.72%), Query Frame = 1 
Query:    1 QFTVRRAFLEDVRSLRARLVLVGLAHVVLLPFLLLFMLVYFFLQNAQEWHSSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYEHATEFLMRFPRPVLASIMRVTRFVSGSVVAVLLVMTVLEVGVGVELVGWGEGWL 426
            +FT+RR FL D   LR R V VG+A + L+PFLL+FM++ FFLQNAQ W   K+YLGPR+WSPLA+W FRE+NEL H FE+R+  S+ +A  +  + PRPVL  + R   +++GSVVAVLL+ T+++  + + +  W    L
Sbjct:  394 KFTLRRDFLSDEAGLRRRFVWVGVAQLALMPFLLVFMVIQFFLQNAQAWQQKKNYLGPRQWSPLAQWRFREYNELPHLFERRLRASHPYAALYTRQTPRPVLGVLARCLAYMTGSVVAVLLLFTLVDESIVLYVKVWDRNLL 535
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BLAST of mRNA_S-dermatodea_contig13674.2123.1 vs. uniprot
Match: A0A4D9D5X3_9STRA (Autophagy-related protein 9 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5X3_9STRA)

HSP 1 Score: 140 bits (354), Expect = 5.080e-36
Identity = 70/142 (49.30%), Postives = 99/142 (69.72%), Query Frame = 1 
Query:    1 QFTVRRAFLEDVRSLRARLVLVGLAHVVLLPFLLLFMLVYFFLQNAQEWHSSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYEHATEFLMRFPRPVLASIMRVTRFVSGSVVAVLLVMTVLEVGVGVELVGWGEGWL 426
            +FT+RR FL D   LR R V VG+A + L+PFLL+FM++ FFLQNAQ W   K+YLGPR+WSPLA+W FRE+NEL H FE+R+  S+ +A  +  + PRPVL  + R   +++GSVVAVLL+ T+++  + + +  W    L
Sbjct:  390 KFTLRRDFLSDEAGLRRRFVWVGVAQLALMPFLLVFMVIQFFLQNAQAWQQKKNYLGPRQWSPLAQWRFREYNELPHLFERRLRASHPYAALYTRQTPRPVLGVLARCLAYMTGSVVAVLLLFTLVDESIVLYVKVWDRNLL 531
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BLAST of mRNA_S-dermatodea_contig13674.2123.1 vs. uniprot
Match: A0A7S2STW1_9STRA (Autophagy-related protein 9 (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STW1_9STRA)

HSP 1 Score: 130 bits (327), Expect = 3.290e-33
Identity = 62/127 (48.82%), Postives = 87/127 (68.50%), Query Frame = 1 
Query:    1 QFTVRRAFLEDVRSLRARLVLVGLAHVVLLPFLLLFMLVYFFLQNAQEWHSSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYEHATEFLMRFPRPVLASIMRVTRFVSGSVVAVLLVMTVLE 381
            +F VRR FL++   LR R + VG  + + +PF+L+FM++YFFL N Q+WH  K YLGPR+W  LA W FREFNEL H FE+R++ SYE A+ +  RF  P  +   R   F++GS VAVLL++T ++
Sbjct:   25 KFKVRRRFLQEPDKLRQRFLCVGCVYFLFMPFILVFMIIYFFLSNVQDWHVKKDYLGPRQWDNLALWQFREFNELPHLFERRLNLSYEPASAYARRFHDPATSMAARCVAFIAGSFVAVLLILTAID 151
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13674.2123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9U8_9PHAE3.120e-6783.10Autophagy-related protein 9 n=1 Tax=Ectocarpus sp.... [more]
D7FZF2_ECTSI4.450e-6682.39Autophagy-related protein 9 n=1 Tax=Ectocarpus sil... [more]
A0A836CNL2_9STRA2.540e-4760.56Autophagy protein Apg9-domain-containing protein n... [more]
I2CRC3_NANGC1.790e-3849.30Autophagy-related protein 9 (Fragment) n=1 Tax=Nan... [more]
A0A7S1U8L1_9STRA4.370e-3753.19Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0YN89_AURAN3.080e-3656.10Autophagy-related protein 9 n=1 Tax=Aureococcus an... [more]
A0A7S3XNV8_HETAK3.250e-3655.65Autophagy-related protein 9 (Fragment) n=1 Tax=Het... [more]
W7TMH9_9STRA3.590e-3649.30Autophagy-related protein 9 n=1 Tax=Nannochloropsi... [more]
A0A4D9D5X3_9STRA5.080e-3649.30Autophagy-related protein 9 n=1 Tax=Nannochloropsi... [more]
A0A7S2STW1_9STRA3.290e-3348.82Autophagy-related protein 9 (Fragment) n=1 Tax=Rhi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13674contigS-dermatodea_contig13674:689..4701 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score223.0
Seed ortholog evalue8.8e-56
Seed eggNOG ortholog2880.D7FZF2
Preferred nameATG9A
KEGG koko:K02349,ko:K17907,ko:K19672
KEGG TC9.A.15.1
KEGG Pathwayko04136,ko04137,ko04138,ko04140,map04136,map04137,map04138,map04140
GOsGO:0000003,GO:0000045,GO:0000139,GO:0000272,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000407,GO:0000421,GO:0000422,GO:0001817,GO:0001818,GO:0001894,GO:0001932,GO:0001934,GO:0002165,GO:0002376,GO:0003008,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005776,GO:0005783,GO:0005789,GO:0005794,GO:0005802,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006909,GO:0006914,GO:0006950,GO:0006952,GO:0006955,GO:0006979,GO:0006996,GO:0007005,GO:0007033,GO:0007154,GO:0007275,GO:0007552,GO:0007586,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009057,GO:0009251,GO:0009267,GO:0009314,GO:0009416,GO:0009453,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009628,GO:0009653,GO:0009791,GO:0009886,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010008,GO:0010498,GO:0010562,GO:0010604,GO:0010623,GO:0010646,GO:0010647,GO:0010648,GO:0010669,GO:0012501,GO:0012505,GO:0012506,GO:0015980,GO:0016020,GO:0016021,GO:0016043,GO:0016052,GO:0016192,GO:0016236,GO:0016237,GO:0019220,GO:0019222,GO:0019538,GO:0019941,GO:0019954,GO:0022411,GO:0022600,GO:0022607,GO:0023051,GO:0023056,GO:0023057,GO:0030054,GO:0030154,GO:0030163,GO:0030277,GO:0030587,GO:0030659,GO:0031090,GO:0031152,GO:0031153,GO:0031224,GO:0031288,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0031984,GO:0032006,GO:0032007,GO:0032258,GO:0032268,GO:0032270,GO:0032479,GO:0032480,GO:0032501,GO:0032502,GO:0032588,GO:0032648,GO:0032688,GO:0032872,GO:0032874,GO:0033036,GO:0033365,GO:0033554,GO:0034067,GO:0034497,GO:0034599,GO:0034613,GO:0034727,GO:0035069,GO:0035096,GO:0040011,GO:0042175,GO:0042221,GO:0042325,GO:0042327,GO:0042330,GO:0042331,GO:0042592,GO:0042594,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043408,GO:0043410,GO:0043632,GO:0043933,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044257,GO:0044260,GO:0044262,GO:0044264,GO:0044265,GO:0044267,GO:0044275,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044764,GO:0044804,GO:0044805,GO:0045087,GO:0045937,GO:0046328,GO:0046330,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048707,GO:0048856,GO:0048869,GO:0048871,GO:0050789,GO:0050794,GO:0050832,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051259,GO:0051260,GO:0051603,GO:0051641,GO:0051703,GO:0051704,GO:0051707,GO:0051716,GO:0055037,GO:0055114,GO:0060033,GO:0060249,GO:0060255,GO:0060729,GO:0061709,GO:0061723,GO:0061726,GO:0061912,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070302,GO:0070304,GO:0070727,GO:0070887,GO:0070925,GO:0071496,GO:0071704,GO:0071840,GO:0072665,GO:0080090,GO:0080134,GO:0080135,GO:0090382,GO:0090702,GO:0097708,GO:0098542,GO:0098588,GO:0098630,GO:0098657,GO:0098743,GO:0098791,GO:0098805,GO:0098827,GO:0098852,GO:0099120,GO:1901564,GO:1901565,GO:1901575,GO:1902531,GO:1902532,GO:1902533,GO:1903008,GO:1905037
EggNOG free text desc.process utilizing autophagic mechanism
EggNOG OGsKOG2173@1,KOG2173@2759
EC2.7.7.7
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03029,ko03036,ko03400,ko04131
Hectar predicted targeting categorysignal anchor
Exons3
Model size426
Cds size426
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13674.2123.1prot_S-dermatodea_contig13674.2123.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig13674 689..4701 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924293.7100122-CDS-S-dermatodea_contig13674:688..8921622924293.7100122-CDS-S-dermatodea_contig13674:688..892Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13674 689..892 -
1694079157.1571448-CDS-S-dermatodea_contig13674:688..8921694079157.1571448-CDS-S-dermatodea_contig13674:688..892Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13674 689..892 -
1622924293.7190955-CDS-S-dermatodea_contig13674:1461..15241622924293.7190955-CDS-S-dermatodea_contig13674:1461..1524Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13674 1462..1524 -
1694079157.178499-CDS-S-dermatodea_contig13674:1461..15241694079157.178499-CDS-S-dermatodea_contig13674:1461..1524Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13674 1462..1524 -
1622924293.729515-CDS-S-dermatodea_contig13674:4542..47011622924293.729515-CDS-S-dermatodea_contig13674:4542..4701Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13674 4543..4701 -
1694079157.1880941-CDS-S-dermatodea_contig13674:4542..47011694079157.1880941-CDS-S-dermatodea_contig13674:4542..4701Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13674 4543..4701 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig13674.2123.1

>prot_S-dermatodea_contig13674.2123.1 ID=prot_S-dermatodea_contig13674.2123.1|Name=mRNA_S-dermatodea_contig13674.2123.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=142bp
QFTVRRAFLEDVRSLRARLVLVGLAHVVLLPFLLLFMLVYFFLQNAQEWH
SSKSYLGPREWSPLARWTFREFNELQHFFEQRMSGSYEHATEFLMRFPRP
VLASIMRVTRFVSGSVVAVLLVMTVLEVGVGVELVGWGEGWL
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mRNA from alignment at S-dermatodea_contig13674:689..4701-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig13674.2123.1 ID=mRNA_S-dermatodea_contig13674.2123.1|Name=mRNA_S-dermatodea_contig13674.2123.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4013bp|location=Sequence derived from alignment at S-dermatodea_contig13674:689..4701- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGTTCACAGTTCGGCGAGCGTTTCTGGAGGACGTGCGGTCGCTGAGGGC
AAGGCTTGTCCTCGTCGGGCTGGCGCACGTGGTGCTGCTCCCGTTTTTGC
TGCTTTTCATGCTTGTCTACTTCTTCCTGCAGAACGCCCAGGAGTGGCAT
TCGAGCAAGGTTAGCTTCATAATAAAACTGCTCAGGATTATAGTTATAAC
ATATATGTAATCATTTTAGGACCGAGGCCGTTGTTGCGCCGGTTATCATC
TTGATTACCAGGTATTTAATAGCGATTTGCCCTATTTTTAATATATGAAT
AGCGATTTAGAGTGTTGATTTCTTCTGCAACACGAAAATCAATCCTGTAC
GTTTTGTTTTTTGGGCTGAAAAGTGATGCCAAACGACTTGATTTTTGTGT
TGAGCGCCAAACGACTTGATTTTTACAGTTGAGCGACCACGCACACCTCA
CGGGAGTAGCCGTAGCTACAGTACCTACCTACTACGAGTACAGTAGTCTG
GACCAAATGTGGCAAACACTGTAGTATTAATATAATCTGGCCACGAATGA
GAGCGGGATCGGCAACCATTGGGGTGGGCCGGTCGCTTGTAAGTGTGATC
ATAACAAACTAATAATAGTGGGTATTAATAGCCACGGCTACTACGCCCGT
GTGAGGTGTGCGTTGGCAGCTTTGGAAGTAGACCCGATGTCTTTTCAAAA
CTGGCGCACTAAAAAAACTAAAAAATCGTACAGGACTTAATTTTAGTACA
GTGTACGAAGTCGGCCTCGGCCTCATCTCCGCCTAAAAAAGAAACGTGTT
GCAGAAATCGTCCTCTCTATCTAAATCGCTACTGTAATAACAATGGTTCT
TTGTTTTGTTGATTAATAAAGATACTACTGTAATTAAACTAAGGATAACA
TTACACCCCCACAATGAGACACCATAAAACGATCCGCTCTGGCCTTTTTT
ACAACATCTGCAATCAATCTCCCGGCCTGAACTGTCAAGCGTTTAACAAA
ATAAAAATAAAACGCTATAATATATATGACAGTGAGCAGAGTTTGGTCTT
GATTTGTAATATTGGTTTTTTGTTGCGGTGGCGGGTGCACGCACAAAGTG
CCATTAGCCCGTGCATGCAAGCTGCGCGCGGCCTGCTGATTATCACCACT
TTTGTTTACCGCCGTTCGGGTACTGCACCTGTTCGATGTGGAATACTATA
ATAGTATGTAGTGTATAGTATAGAGTAGCCACCGTTCGGGTACTCTACCT
GTTCGATGTGACATACTAGAATATAGTATACAGTAAATAGTTGCCACCGT
TCGGGCACTGTACCTGTTCGAATTGTTCGATGTGGAATACTAGTATGTAG
TATATAGAGTAGCCACCGTTCGGGCACTGTACCTGTTCGATGTGACATAC
TAGAATATAGTATACAGTAAATAGTTCCCACCGTTCGGGCACTGTACCTG
TCCGATGTCAACTCCGGTGCGGATATATTACTCCGAAAAACATGCTCAGC
CTCATACTTCGAAGTACAAAGTAAAAAAAATCATACGAGCAAGTCTGAAG
AAAGCTGTTCCCTCGATAATCAACCACCCTCTGAAAAATGACAGTCTGGC
TTCGAGCTCTCTTTGGCAACAAGAAATATAACAATATTTCGGCCAAAATT
CCTTACTTGTAGAAAAATAAACAAAAGCCTATTATAGTACTTCGAAGTAT
ATAAATTCCGGACAAGGTGCTCCGGGGGGCCACTGGTAGTTTTTGTTTTT
GTTATCAGCTCAAAATTGGTTCTGATAACCGTCACTATAACTCCGCCGTA
ATAATTGCGTTCTCTACGAGTTCTCTTCTAGCGTTTTCTCTACATCTGGG
GTGCTACAGTATTTCTTATTTCTTGTACCATAGTAAGTACCAGGTATCAG
GGACGGTACGGTGTATAGTAGAAGTAGACTTCTGATTAGTTATTTTTCTC
CTTGACTCTTTGCGTGTCTGACCACAGGTCGGGTCGGATTAGGCCGATCG
GCTATACGCGTGCAAATCAAATATAAATAAAAATATAAATAAATCTGCTG
TTGCTATGATTTGTTATTTGTTTTTTTAACTGTGATTTTCCATTGCTGGC
TACTTTTTCATGGCACCACCACCTCTGTATGTATTCACTATAGTTATGCT
CACAAAACAGAGTAGAGCTAGAATTGCAGGGAAGATTTTAACGTATGAAG
TTTTCATTTGTAGAGCTATATATATACAAGTATACACAATTTTTGCGATT
GTTGGTTTGCTTTTTATCCTATTTTTGTTTTTTACGAATGTTGGCCCTGA
TTCAGCGAGCGATGTTGAGCGCACGGCTGGATTTGGATGCGCAAGAGAAT
TTAGTTGGTGTGAGGCCATGACCATCATCAACATGTAGACCATCATCGAT
ATCTCATCATAATCGCTGTCGTCATCATCATTCACGTGCAGTTTGTTTTG
CCTACTTTGACGGGAAAAAAACAACGAGAATCAAAGGCATTTAGTTGGCC
TTGTCCTTTTCCGCTTCATACCCATTTCCCTAGTGTTTGTAGCTCTTGCA
AATCGACACTTTGTCACATCGCTGTGTACAATAGCACAGATCGAGACTTG
ACCTTGTGCATGCAACTGCCCTTTCTCTTGGCCCACTCGATGGATTCGGA
GTGTTCAGAATTTTAGATCGCCACAAGAAAATGAAATCGACGTCGCGATG
GCCAAGGCTGTCATACCTGGATCGGTGGGTTCAAAAGTATAATCCTTCGG
AAAGTCGATTTTCACAGACAAAATATATATTTTGCCAAGTTCAACGGCTA
GGTGTGGCGCGGTGGTGGCCGGCCCAGACTGCAGAGTGACGTCTTGGCTA
CCCATCGGTAGTGTGCAGAATTTCAGTTCGTCAGTAGAACCCAAGCTCTA
GCTCGCGCTCCTCCCTGCTTGGTAGGGAAAAAAAATGTGGTATTAATAAT
GTGCTTCCATAGGTAAATTTTGAGTTTTGTTGTGGGTTTTGTTCCAGAAT
TCAATAAATGGGGGGACAAAACGTATGTAGGGTACCATCGTTATCATCGT
CATCATCAATTATCAACACCGGTTACGTTTTTTCTCGCGCGACGTTTCGG
CTCACCTGCCCATTTCCGCTCGAATTTTCGTGTGGCGCAAAACAAAAAAA
CACACAACAACATCAAAACGACGGCAGAGCTACCTCGGGCCGCGCGAGTG
GAGCCCGCTGGCCAGGTGGACCTTCAGGGAGTTCAACGAGGTGTGGAGGC
GTGCGCACACTTTTTTTTCTTCATTCGTTGTATGTTTTCTTTTCTTTTTT
CTCTTTTCTTTTTTCTTTTTTCTTTTTTTTGATAAAAAACAAAATCTAGT
TCCCATGTACATCCCTAACTCACAAGCACACTGGTTCAGGGGAAACTGAA
AGTAGGTACGTCCTTTATTTTATTTTATTTTTGTCTATGCTTCTTCCGAC
GACCGCGCGGCGTTACATCCTATTTCCTGTCATATCTCGATCATCCCATC
ATCCCGCCTGCGGTCACCTGGGATGGATGAACCATTAACCATCCCATACA
TTTGTATAAACTAAATGTGTATATTTTCTTCCCCTCCTCCATACGTCTTC
GCGCCACCTTTGGCAAAGTAGGAAAGAACGATTGGCCATCGGCGATCGAT
CCTGTCAGAACAACTAACGCTTCTTTCTCCCGAGGACGCATGTATTGGTT
GTTGATTTTTAACACTTCGAGTGCCCCTCCCGCCCTCCCTCCCCCCCCCC
CGCCCGCCCGCCCGCCCGCCGCCATATTTCCGTACCCCCTCGCGGTCTAC
CCGCCTCAGCTCCAGCACTTCTTCGAGCAGCGGATGTCAGGCAGCTACGA
GCATGCGACCGAGTTCCTCATGAGGTTTCCAAGGCCAGTGTTGGCATCGA
TTATGCGGGTCACACGTTTTGTCTCCGGCTCCGTCGTGGCTGTCCTCCTC
GTCATGACGGTTCTAGAGGTAGGGGTCGGCGTGGAGTTGGTGGGATGGGG
CGAGGGGTGGTTG
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Coding sequence (CDS) from alignment at S-dermatodea_contig13674:689..4701-

>mRNA_S-dermatodea_contig13674.2123.1 ID=mRNA_S-dermatodea_contig13674.2123.1|Name=mRNA_S-dermatodea_contig13674.2123.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=852bp|location=Sequence derived from alignment at S-dermatodea_contig13674:689..4701- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGTTCACAGTTCGGCGAGCGTTTCTGGAGGACGTGCGGTCGCTGAGGGC
AAGGCTTGTCCTCGTCGGGCTGGCGCACGTGGTGCTGCTCCCGTTTTTGC
TGCTTTTCATGCTTGTCTACTTCTTCCTGCAGAACGCCCAGGAGTGGCAT
TCGAGCAAGCAGTTCACAGTTCGGCGAGCGTTTCTGGAGGACGTGCGGTC
GCTGAGGGCAAGGCTTGTCCTCGTCGGGCTGGCGCACGTGGTGCTGCTCC
CGTTTTTGCTGCTTTTCATGCTTGTCTACTTCTTCCTGCAGAACGCCCAG
GAGTGGCATTCGAGCAAGAGCTACCTCGGGCCGCGCGAGTGGAGCCCGCT
GGCCAGGTGGACCTTCAGGGAGTTCAACGAGAGCTACCTCGGGCCGCGCG
AGTGGAGCCCGCTGGCCAGGTGGACCTTCAGGGAGTTCAACGAGCTCCAG
CACTTCTTCGAGCAGCGGATGTCAGGCAGCTACGAGCATGCGACCGAGTT
CCTCATGAGGTTTCCAAGGCCAGTGTTGGCATCGATTATGCGGGTCACAC
GTTTTGTCTCCGGCTCCGTCGTGGCTGTCCTCCTCGTCATGACGGTTCTA
GAGGTAGGGGTCGGCGTGGAGTTGGTGGGATGGGGCGAGGGGTGGTTGCT
CCAGCACTTCTTCGAGCAGCGGATGTCAGGCAGCTACGAGCATGCGACCG
AGTTCCTCATGAGGTTTCCAAGGCCAGTGTTGGCATCGATTATGCGGGTC
ACACGTTTTGTCTCCGGCTCCGTCGTGGCTGTCCTCCTCGTCATGACGGT
TCTAGAGGTAGGGGTCGGCGTGGAGTTGGTGGGATGGGGCGAGGGGTGGT
TG
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