mRNA_S-dermatodea_contig1363.2101.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1363.2101.1 vs. uniprot
Match: D8LK44_ECTSI (ABC transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK44_ECTSI) HSP 1 Score: 128 bits (321), Expect = 3.450e-33 Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 1
Query: 1 GLFNADPHPGNILIMPEEKVGPVKRGFSLLGLRTPKASLRVGLLDWGQIKELTRQDRDKVANLIVAVSSKRSNDIVR 231
GLFNADPHPGNILIMPEE+VGP+KRGF LLGLRTPK LR+GLLDWGQ KEL RQDR+KVANLI+AVSS S DIVR
Sbjct: 330 GLFNADPHPGNILIMPEEQVGPIKRGFGLLGLRTPK--LRIGLLDWGQTKELGRQDREKVANLILAVSSHASPDIVR 404
BLAST of mRNA_S-dermatodea_contig1363.2101.1 vs. uniprot
Match: H6WB89_VAULI (ABC transporter-like protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB89_VAULI) HSP 1 Score: 82.8 bits (203), Expect = 1.010e-16 Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 1
Query: 1 GLFNADPHPGNILIMPEEKV-GPVKRGFSLLGLRTPKASLRVGLLDWGQIKELTRQDRDKVANLIVAVSSKRSNDIV 228
GLFNAD HPGNI+IMPE + GPV L+GL TP +L VGLLDWGQ+KEL R++ A L+ A+++K+S D V
Sbjct: 464 GLFNADLHPGNIVIMPEGRAWGPVGLVLGLVGLNTP--ALSVGLLDWGQVKELDEGSRERFARLVCAIANKKSQDEV 538
BLAST of mRNA_S-dermatodea_contig1363.2101.1 vs. uniprot
Match: A0A835Z9N8_9STRA (ABC transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N8_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.060e-14 Identity = 41/75 (54.67%), Postives = 50/75 (66.67%), Query Frame = 1
Query: 1 GLFNADPHPGNILIMPEEKV-GPVKRGFSLLGLRTPKASLRVGLLDWGQIKELTRQDRDKVANLIVAVSSKRSND 222
GLFNAD HPGNI+IMPE + G LLGL TPK LRVGLLDWGQ+KEL R + A L++A+S + +
Sbjct: 314 GLFNADLHPGNIVIMPEGRAWGLTGLVLGLLGLNTPK--LRVGLLDWGQVKELDVDSRTRFARLVIAISDGKGRE 386
BLAST of mRNA_S-dermatodea_contig1363.2101.1 vs. uniprot
Match: B8CBS2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBS2_THAPS) HSP 1 Score: 65.1 bits (157), Expect = 1.720e-10 Identity = 31/76 (40.79%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 1 GLFNADPHPGNILIMPEEKVGPVKRGFSLLGLRTPKASLRVGLLDWGQIKELTRQDRDKVANLIVAVSSKRSNDIV 228
GLFNAD HPGNIL++ +E PK + ++GL+D+GQ K LT+++R K+A LIV+++ K S++++
Sbjct: 466 GLFNADCHPGNILVVLDEN--------------NPKQNPKLGLIDYGQCKRLTKEERVKIAKLIVSIADKESDEVI 527
BLAST of mRNA_S-dermatodea_contig1363.2101.1 vs. uniprot
Match: A0A7S3Q7C7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q7C7_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.530e-9 Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 1
Query: 1 GLFNADPHPGNILIMPEEKVGPVKRGFSLLGLRTPKASLRVGLLDWGQIKELTRQDRDKVANLIVAVSSKRSNDIV 228
GLFNADPHPGNIL++ E K S L R K++ VGL+D+GQ K+LT +++ KVA LI++V++ S++ +
Sbjct: 495 GLFNADPHPGNILVVEE------KDEKSSLKRRRKKSA--VGLIDYGQCKKLTEEEQLKVARLILSVANNESDEAI 562
BLAST of mRNA_S-dermatodea_contig1363.2101.1 vs. uniprot
Match: A0A7S2C479_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C479_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 5.650e-9 Identity = 29/69 (42.03%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 1 GLFNADPHPGNILIMPEEKVGPVKRGFSLLGLRTPKASLRVGLLDWGQIKELTRQDRDKVANLIVAVSS 207
GLFN+DPHPGNIL++ +E+ G K+S R+GL+D+GQ K+LT +++ K+A L+++V++
Sbjct: 133 GLFNSDPHPGNILVVEKEEDGK-------------KSSRRLGLIDYGQCKQLTPEEQYKIARLVLSVAN 188
BLAST of mRNA_S-dermatodea_contig1363.2101.1 vs. uniprot
Match: A0A7S4D6K6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6K6_HETAK) HSP 1 Score: 58.9 bits (141), Expect = 2.450e-8 Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 1
Query: 1 GLFNADPHPGNILIMPEEKVGPVKRGFSLLGLRTPKASLRVGLLDWGQIKELTRQDRDKVANLIVAVSSKRSN-DIVR 231
G+FNADPHPGN+L+ + GP G L VGLLDWGQ KEL + ++A+L+ A+S K + DIV+
Sbjct: 204 GVFNADPHPGNLLL---RRAGPASGG------------LAVGLLDWGQTKELGEEATARLAHLVKALSQKENKEDIVQ 266
BLAST of mRNA_S-dermatodea_contig1363.2101.1 vs. uniprot
Match: A0A7S2U7H6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7H6_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 3.440e-8 Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 1 GLFNADPHPGNILIMPEEKVGPVKRGFSLLGLRTPKASLRVGLLDWGQIKELTRQDRDKVANLIVAVSSKRSN 219
GLFNADPHPGNIL++ E P S ++GL+D+GQ K LT Q++ KVA L+++V+ S+
Sbjct: 342 GLFNADPHPGNILVINENDARP---------------STKLGLIDFGQCKRLTPQEQVKVARLLLSVAHNESD 399
BLAST of mRNA_S-dermatodea_contig1363.2101.1 vs. uniprot
Match: A0A1Y2H4Q2_9FUNG (ABC1 family-domain-containing protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2H4Q2_9FUNG) HSP 1 Score: 57.8 bits (138), Expect = 6.500e-8 Identity = 32/78 (41.03%), Postives = 45/78 (57.69%), Query Frame = 1
Query: 1 GLFNADPHPGNILIMPEEKVG-PVKRGFSLLGLRTPKASLRVGLLDWGQIKELTRQDRDKVANLIVAVSSKRSNDIVR 231
GLFN DPHPGNIL+ ++ G PV +GL+D+GQ+K+LT + R +A ++VAV+ K IVR
Sbjct: 449 GLFNGDPHPGNILLSHSQRDGSPV-----------------LGLIDYGQVKQLTDEQRRSIARMVVAVAEKDRAQIVR 509
BLAST of mRNA_S-dermatodea_contig1363.2101.1 vs. uniprot
Match: A0A7S3R802_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3R802_DUNTE) HSP 1 Score: 56.6 bits (135), Expect = 1.680e-7 Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 1
Query: 1 GLFNADPHPGNILIMPEEKVGPVKRGFSLLGLRTPKASLRVGLLDWGQIKELTRQDRDKVANLIVAVSSKRSNDIVR 231
G+F+ DPHPGN++ P+ G +RV +LDWGQ+K+LT +R + A L+VA++S R D++R
Sbjct: 459 GIFHTDPHPGNLMATPDPAGG----------------GIRVAILDWGQMKQLTHNERVRYALLVVAMAS-RDGDLLR 518 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1363.2101.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1363.2101.1 >prot_S-dermatodea_contig1363.2101.1 ID=prot_S-dermatodea_contig1363.2101.1|Name=mRNA_S-dermatodea_contig1363.2101.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=79bp GLFNADPHPGNILIMPEEKVGPVKRGFSLLGLRTPKASLRVGLLDWGQIKback to top mRNA from alignment at S-dermatodea_contig1363:20285..21134+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1363.2101.1 ID=mRNA_S-dermatodea_contig1363.2101.1|Name=mRNA_S-dermatodea_contig1363.2101.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=850bp|location=Sequence derived from alignment at S-dermatodea_contig1363:20285..21134+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1363:20285..21134+ >mRNA_S-dermatodea_contig1363.2101.1 ID=mRNA_S-dermatodea_contig1363.2101.1|Name=mRNA_S-dermatodea_contig1363.2101.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=474bp|location=Sequence derived from alignment at S-dermatodea_contig1363:20285..21134+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |