mRNA_S-dermatodea_contig13611.2092.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: A0A6H5KX44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX44_9PHAE) HSP 1 Score: 320 bits (821), Expect = 8.760e-107 Identity = 146/202 (72.28%), Postives = 169/202 (83.66%), Query Frame = 1
Query: 1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWIGWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAEQARSAEDPE 606
+SRGWT GE+ LRVP+DNW Y+++LR +P+ VKACTSG VYALGD AQ+ EGT LA+I+R RV RSA+AGLLLHGPLSHVWYNVCEG+FD +GWN YWWV PK+I DQ+LWGP WNAVYI FLG L KDS I EA+ STALPLV+AG+RLWPLAH+VTYGL+P ENRLLWVD VEI+WVTILS QAAEQARS + E
Sbjct: 139 VSRGWTIGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELAEIERQRVVRSAMAGLLLHGPLSHVWYNVCEGLFDIVGWNEYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHVVTYGLVPKENRLLWVDAVEIVWVTILSSQAAEQARSPAEQE 340
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: A0A836C8Z2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z2_9STRA) HSP 1 Score: 287 bits (734), Expect = 6.270e-94 Identity = 131/214 (61.21%), Postives = 162/214 (75.70%), Query Frame = 1
Query: 4 SRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWIGWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAEQARSAEDPEMVEMEPDNGGQVS 645
SRGWTA E LR+P DNW Y D+LR +P+LVKA TSGTVYALGDWTAQT GT LA++ R RVARSA AG + HGPLSH WY VCE +F IGWNG WWV PK++ DQ++WGP WNA Y+ +G +K+D+ + EAV ST +PLV++G++LWP HLVTYGLIP ENRLLWVD VEILWVTILSKQAA++A+ + P + D G+++
Sbjct: 87 SRGWTAEEVLLRLPQDNWQGYMDMLRSHPVLVKAVTSGTVYALGDWTAQTTNGTPLAELDRWRVARSAAAGFVGHGPLSHCWYEVCEALFSAIGWNGAWWVTLPKIMTDQLVWGPIWNATYVVLVGLMKRDAPARVWEAVTSTMVPLVVSGLKLWPAVHLVTYGLIPPENRLLWVDTVEILWVTILSKQAADEAKR-DQPLSTDTAADEDGELT 299
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: W7TQH1_9STRA (Peroxisomal membrane 22 kDa (Mpv17 pmp22) family protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQH1_9STRA) HSP 1 Score: 249 bits (636), Expect = 1.080e-77 Identity = 109/192 (56.77%), Postives = 139/192 (72.40%), Query Frame = 1
Query: 1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWIGWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAA 576
+ RGWT E F R+P+DNW Y +VL +P+ VKA TSG+VY LGD AQ +EG L +I RGRVARS +AG + HGPLSH WY V E F W+GW G WW PK+ +DQ++W P WN YI+ LG +K+++ I V ST+ L+ +G++LWPLAH+VTYG+IP ENRLLWVD VEILWVTILS++AA
Sbjct: 150 VWRGWTPAEIFTRIPLDNWDGYMNVLSLHPVFVKAVTSGSVYTLGDGVAQLYEGKTLGEIDRGRVARSGIAGFVGHGPLSHWWYGVSEDFFGWLGWEG-WWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVNTVKSTSFSLITSGLKLWPLAHVVTYGVIPVENRLLWVDLVEILWVTILSREAA 340
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: B7G9T7_PHATC (Predicted protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9T7_PHATC) HSP 1 Score: 239 bits (609), Expect = 2.830e-76 Identity = 109/194 (56.19%), Postives = 137/194 (70.62%), Query Frame = 1
Query: 1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWI-GWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAE 579
ISRGWT+ E R+P+D W Y+ VL ++P+ KA TS TVY +GD+ AQ +G A+ D+ RGR+ RS LAGL+ HGPLSH WYNVC+ FD + W WW PKV++DQ WGP WN YI LG +K + ETI + T +PL+L+G++LWPLAH VTYGL+P ENRLLWVD VEILWVTIL+ AAE
Sbjct: 25 ISRGWTSEELAARIPMDVWAGYSQVLENSPVATKAATSATVYTIGDFIAQRTQGAAMGDLDRGRIVRSMLAGLIGHGPLSHFWYNVCDHFFDNVLHWTA-WWSFFPKVVVDQTTWGPIWNNTYILLLGLMKLEKLETIWSDMKRTTVPLILSGLKLWPLAHCVTYGLVPVENRLLWVDAVEILWVTILATTAAE 217
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: A0A7S1VV68_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV68_9STRA) HSP 1 Score: 231 bits (589), Expect = 1.280e-71 Identity = 108/211 (51.18%), Postives = 143/211 (67.77%), Query Frame = 1
Query: 1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWIGWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAEQARSAEDPEMVEMEPDNG 633
+ RGWTA E R+ +DNW Y+++L P+ KA TS TVYA+GD AQ EG ++ ++ R R RS LAGL+ HGPLSHVWY+V E +F + WN WW PKV++DQ+ WGPFWN +YI LG +K +S+ET+ + T +PL+++G++LWPLAH VTYGLIP ENRLLWVD VEI WVTIL+ QA+ E +E + G
Sbjct: 133 MMRGWTAAESLTRISLDNWADYSEILNAAPLQTKAITSATVYAIGDIIAQRTEGVSMGELDRPRTLRSLLAGLIGHGPLSHVWYDVSEELFTALHWNE-WWGFFPKVMVDQLTWGPFWNNMYIVLLGIMKMESWETMWGDIKRTTVPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDVVEIAWVTILASQASGAGAEESVVETAAVEEEVG 342
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: A0A7S2HYH1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYH1_9STRA) HSP 1 Score: 228 bits (580), Expect = 2.240e-70 Identity = 105/192 (54.69%), Postives = 133/192 (69.27%), Query Frame = 1
Query: 1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWIGWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAA 576
++RGWT E R+P+DNW +Y+ VL D PI KA TS +VY +GD AQ EG ++ D+ R R+ RS LAGL+ HGPLSH WY+ E FD + WW PKVI+DQ WGPFWN YI LG +K D +E I + T +PLV++G++LWPLAH VTYGL+P ENRLLWVD VEI+WVTIL+ QA+
Sbjct: 125 LTRGWTPEEVAARIPMDNWSSYSAVLEDAPISTKAITSASVYTIGDVIAQRTEGNSMGDLDRPRILRSLLAGLIGHGPLSHFWYDYSEAFFDDVLKWTEWWSFFPKVILDQTTWGPFWNNTYIILLGAMKLDKWENIWGDIKRTTIPLVVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILATQAS 316
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: A0A7S2LHE2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LHE2_9STRA) HSP 1 Score: 226 bits (577), Expect = 5.650e-70 Identity = 107/207 (51.69%), Postives = 135/207 (65.22%), Query Frame = 1
Query: 1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWIGWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAEQARSAEDPEMVEME 621
I RGW+ E RVP+DNW +Y +L PI K+ TS TVYA+GD AQ EGT + ++ RGR+ RS AGL+ HGPLSH WY + E F+ + WW PKV+IDQ LWGPFWN YI LG ++ + + T +PLV++G++LWPLAH +TYGL+P ENRLLWVD VEI+WVTIL+ QAA S E PE E E
Sbjct: 130 IIRGWSTEEIAYRVPLDNWNSYNAILAAAPIQTKSITSATVYAIGDTIAQRTEGTEIGELDRGRIGRSLAAGLIGHGPLSHFWYQISEDFFNNVLMWTDWWSFIPKVVIDQTLWGPFWNNSYIVLLGVMQFQKPSQVWADIKRTTIPLVVSGLKLWPLAHCITYGLVPVENRLLWVDMVEIVWVTILATQAAGSVESNEAPEKQEQE 336
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: A0A6V2I5L6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2I5L6_9STRA) HSP 1 Score: 224 bits (571), Expect = 5.400e-69 Identity = 106/209 (50.72%), Postives = 134/209 (64.11%), Query Frame = 1
Query: 1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWIGWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAEQARSAEDPEMVEMEPD 627
++RGWT E R+P+DNW Y+ L ++PI KA TS +VY +GD AQ EG + ++ R R+ RS LAGL+ HGP+SH WY E FD + WW PKV IDQ WGP WN YI LG +K DS+E I + T +PL+++G++LWPLAH VTYGLIP ENRLLWVD VEI+WVTIL+ QA+ A V EPD
Sbjct: 124 LTRGWTPEEIATRIPIDNWIGYSSTLHNSPISTKAITSASVYTIGDVIAQKTEGAGMGELDRPRIIRSLLAGLIGHGPMSHFWYEYSEDFFDNVLHLTEWWSFFPKVAIDQATWGPLWNNTYILLLGLMKLDSWERIWGDMKRTTIPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDLVEIIWVTILANQASGDGHGA-----VHGEPD 327
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: A0A7S2PLY5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PLY5_9STRA) HSP 1 Score: 220 bits (561), Expect = 9.950e-68 Identity = 111/213 (52.11%), Postives = 139/213 (65.26%), Query Frame = 1
Query: 1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIF-DWIGWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAEQARSAEDPEMVEMEPDNGG 636
+ RGWTA E +R+PVDNW +Y +L PI KA TS TVY +GD AQ EG + D+ R RV RS LAG + HGPLSHVWY+ E +F + W WW PKV IDQ+ WGPFWN YI LG ++ + I + T +PL+++G++LWPLAH VTYGL+P ENRLLWVD VEI+WVTIL+ AAE A S + E + E NGG
Sbjct: 114 MMRGWTAAEMAVRIPVDNWASYESILHAAPISTKAVTSATVYTIGDIIAQRTEGKSYGDLDRWRVLRSLLAGCIGHGPLSHVWYDWSEDVFTEQFHWTE-WWSFFPKVAIDQMTWGPFWNNTYILLLGIMQFRPLKDIWTEIKETTVPLIVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILASAAAE-ASSGGNKESSQGE--NGG 322
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: A0A448Z6W8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6W8_9STRA) HSP 1 Score: 214 bits (545), Expect = 9.660e-66 Identity = 108/206 (52.43%), Postives = 136/206 (66.02%), Query Frame = 1
Query: 1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWI-GWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLK---KDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAEQARSAEDPE 606
+ RGW+ E LR+P+DNW +Y+ VL PI KA TS TVYA+GD+ AQ EG + ++ R R+ARS LAGLL HGP+SH WY E +F I +W K+ IDQ +WGPFWN YI LG +K + SFE+I + T +PL+++G++LWPLAH VTYGLIP ENRLLWVD VEI WVTIL+ AA A DPE
Sbjct: 79 MMRGWSLEEIALRIPLDNWNSYSAVLSKAPIPTKAATSATVYAIGDFIAQRAEGRTMGELDRPRLARSLLAGLLGHGPMSHFWYEASENVFQNILHLPSNFWGTAAKIGIDQTIWGPFWNNTYILMLGVMKNGRETSFESIWAEMKRTTIPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDLVEIXWVTILATTAA-----AVDPE 279 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13611.2092.1 >prot_S-dermatodea_contig13611.2092.1 ID=prot_S-dermatodea_contig13611.2092.1|Name=mRNA_S-dermatodea_contig13611.2092.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=216bp ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQback to top mRNA from alignment at S-dermatodea_contig13611:1375..3489- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig13611.2092.1 ID=mRNA_S-dermatodea_contig13611.2092.1|Name=mRNA_S-dermatodea_contig13611.2092.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2115bp|location=Sequence derived from alignment at S-dermatodea_contig13611:1375..3489- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig13611:1375..3489- >mRNA_S-dermatodea_contig13611.2092.1 ID=mRNA_S-dermatodea_contig13611.2092.1|Name=mRNA_S-dermatodea_contig13611.2092.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1296bp|location=Sequence derived from alignment at S-dermatodea_contig13611:1375..3489- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |