mRNA_S-dermatodea_contig13611.2092.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig13611.2092.1
Unique NamemRNA_S-dermatodea_contig13611.2092.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: A0A6H5KX44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX44_9PHAE)

HSP 1 Score: 320 bits (821), Expect = 8.760e-107
Identity = 146/202 (72.28%), Postives = 169/202 (83.66%), Query Frame = 1
Query:    1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWIGWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAEQARSAEDPE 606
            +SRGWT GE+ LRVP+DNW  Y+++LR +P+ VKACTSG VYALGD  AQ+ EGT LA+I+R RV RSA+AGLLLHGPLSHVWYNVCEG+FD +GWN YWWV  PK+I DQ+LWGP WNAVYI FLG L KDS   I EA+ STALPLV+AG+RLWPLAH+VTYGL+P ENRLLWVD VEI+WVTILS QAAEQARS  + E
Sbjct:  139 VSRGWTIGEYILRVPLDNWDGYSEMLRQSPVQVKACTSGIVYALGDLVAQSMEGTELAEIERQRVVRSAMAGLLLHGPLSHVWYNVCEGLFDIVGWNEYWWVPAPKIITDQLLWGPAWNAVYIAFLGVLNKDSSAVIWEAITSTALPLVIAGIRLWPLAHVVTYGLVPKENRLLWVDAVEIVWVTILSSQAAEQARSPAEQE 340          
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: A0A836C8Z2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z2_9STRA)

HSP 1 Score: 287 bits (734), Expect = 6.270e-94
Identity = 131/214 (61.21%), Postives = 162/214 (75.70%), Query Frame = 1
Query:    4 SRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWIGWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAEQARSAEDPEMVEMEPDNGGQVS 645
            SRGWTA E  LR+P DNW  Y D+LR +P+LVKA TSGTVYALGDWTAQT  GT LA++ R RVARSA AG + HGPLSH WY VCE +F  IGWNG WWV  PK++ DQ++WGP WNA Y+  +G +K+D+   + EAV ST +PLV++G++LWP  HLVTYGLIP ENRLLWVD VEILWVTILSKQAA++A+  + P   +   D  G+++
Sbjct:   87 SRGWTAEEVLLRLPQDNWQGYMDMLRSHPVLVKAVTSGTVYALGDWTAQTTNGTPLAELDRWRVARSAAAGFVGHGPLSHCWYEVCEALFSAIGWNGAWWVTLPKIMTDQLVWGPIWNATYVVLVGLMKRDAPARVWEAVTSTMVPLVVSGLKLWPAVHLVTYGLIPPENRLLWVDTVEILWVTILSKQAADEAKR-DQPLSTDTAADEDGELT 299          
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: W7TQH1_9STRA (Peroxisomal membrane 22 kDa (Mpv17 pmp22) family protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQH1_9STRA)

HSP 1 Score: 249 bits (636), Expect = 1.080e-77
Identity = 109/192 (56.77%), Postives = 139/192 (72.40%), Query Frame = 1
Query:    1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWIGWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAA 576
            + RGWT  E F R+P+DNW  Y +VL  +P+ VKA TSG+VY LGD  AQ +EG  L +I RGRVARS +AG + HGPLSH WY V E  F W+GW G WW   PK+ +DQ++W P WN  YI+ LG +K+++   I   V ST+  L+ +G++LWPLAH+VTYG+IP ENRLLWVD VEILWVTILS++AA
Sbjct:  150 VWRGWTPAEIFTRIPLDNWDGYMNVLSLHPVFVKAVTSGSVYTLGDGVAQLYEGKTLGEIDRGRVARSGIAGFVGHGPLSHWWYGVSEDFFGWLGWEG-WWTTFPKITVDQLVWSPIWNGCYIFLLGAMKREALGEIVNTVKSTSFSLITSGLKLWPLAHVVTYGVIPVENRLLWVDLVEILWVTILSREAA 340          
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: B7G9T7_PHATC (Predicted protein (Fragment) n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9T7_PHATC)

HSP 1 Score: 239 bits (609), Expect = 2.830e-76
Identity = 109/194 (56.19%), Postives = 137/194 (70.62%), Query Frame = 1
Query:    1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWI-GWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAE 579
            ISRGWT+ E   R+P+D W  Y+ VL ++P+  KA TS TVY +GD+ AQ  +G A+ D+ RGR+ RS LAGL+ HGPLSH WYNVC+  FD +  W   WW   PKV++DQ  WGP WN  YI  LG +K +  ETI   +  T +PL+L+G++LWPLAH VTYGL+P ENRLLWVD VEILWVTIL+  AAE
Sbjct:   25 ISRGWTSEELAARIPMDVWAGYSQVLENSPVATKAATSATVYTIGDFIAQRTQGAAMGDLDRGRIVRSMLAGLIGHGPLSHFWYNVCDHFFDNVLHWTA-WWSFFPKVVVDQTTWGPIWNNTYILLLGLMKLEKLETIWSDMKRTTVPLILSGLKLWPLAHCVTYGLVPVENRLLWVDAVEILWVTILATTAAE 217          
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: A0A7S1VV68_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV68_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.280e-71
Identity = 108/211 (51.18%), Postives = 143/211 (67.77%), Query Frame = 1
Query:    1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWIGWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAEQARSAEDPEMVEMEPDNG 633
            + RGWTA E   R+ +DNW  Y+++L   P+  KA TS TVYA+GD  AQ  EG ++ ++ R R  RS LAGL+ HGPLSHVWY+V E +F  + WN  WW   PKV++DQ+ WGPFWN +YI  LG +K +S+ET+   +  T +PL+++G++LWPLAH VTYGLIP ENRLLWVD VEI WVTIL+ QA+         E   +E + G
Sbjct:  133 MMRGWTAAESLTRISLDNWADYSEILNAAPLQTKAITSATVYAIGDIIAQRTEGVSMGELDRPRTLRSLLAGLIGHGPLSHVWYDVSEELFTALHWNE-WWGFFPKVMVDQLTWGPFWNNMYIVLLGIMKMESWETMWGDIKRTTVPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDVVEIAWVTILASQASGAGAEESVVETAAVEEEVG 342          
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: A0A7S2HYH1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYH1_9STRA)

HSP 1 Score: 228 bits (580), Expect = 2.240e-70
Identity = 105/192 (54.69%), Postives = 133/192 (69.27%), Query Frame = 1
Query:    1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWIGWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAA 576
            ++RGWT  E   R+P+DNW +Y+ VL D PI  KA TS +VY +GD  AQ  EG ++ D+ R R+ RS LAGL+ HGPLSH WY+  E  FD +     WW   PKVI+DQ  WGPFWN  YI  LG +K D +E I   +  T +PLV++G++LWPLAH VTYGL+P ENRLLWVD VEI+WVTIL+ QA+
Sbjct:  125 LTRGWTPEEVAARIPMDNWSSYSAVLEDAPISTKAITSASVYTIGDVIAQRTEGNSMGDLDRPRILRSLLAGLIGHGPLSHFWYDYSEAFFDDVLKWTEWWSFFPKVILDQTTWGPFWNNTYIILLGAMKLDKWENIWGDIKRTTIPLVVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILATQAS 316          
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: A0A7S2LHE2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LHE2_9STRA)

HSP 1 Score: 226 bits (577), Expect = 5.650e-70
Identity = 107/207 (51.69%), Postives = 135/207 (65.22%), Query Frame = 1
Query:    1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWIGWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAEQARSAEDPEMVEME 621
            I RGW+  E   RVP+DNW +Y  +L   PI  K+ TS TVYA+GD  AQ  EGT + ++ RGR+ RS  AGL+ HGPLSH WY + E  F+ +     WW   PKV+IDQ LWGPFWN  YI  LG ++      +   +  T +PLV++G++LWPLAH +TYGL+P ENRLLWVD VEI+WVTIL+ QAA    S E PE  E E
Sbjct:  130 IIRGWSTEEIAYRVPLDNWNSYNAILAAAPIQTKSITSATVYAIGDTIAQRTEGTEIGELDRGRIGRSLAAGLIGHGPLSHFWYQISEDFFNNVLMWTDWWSFIPKVVIDQTLWGPFWNNSYIVLLGVMQFQKPSQVWADIKRTTIPLVVSGLKLWPLAHCITYGLVPVENRLLWVDMVEIVWVTILATQAAGSVESNEAPEKQEQE 336          
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: A0A6V2I5L6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2I5L6_9STRA)

HSP 1 Score: 224 bits (571), Expect = 5.400e-69
Identity = 106/209 (50.72%), Postives = 134/209 (64.11%), Query Frame = 1
Query:    1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWIGWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAEQARSAEDPEMVEMEPD 627
            ++RGWT  E   R+P+DNW  Y+  L ++PI  KA TS +VY +GD  AQ  EG  + ++ R R+ RS LAGL+ HGP+SH WY   E  FD +     WW   PKV IDQ  WGP WN  YI  LG +K DS+E I   +  T +PL+++G++LWPLAH VTYGLIP ENRLLWVD VEI+WVTIL+ QA+     A     V  EPD
Sbjct:  124 LTRGWTPEEIATRIPIDNWIGYSSTLHNSPISTKAITSASVYTIGDVIAQKTEGAGMGELDRPRIIRSLLAGLIGHGPMSHFWYEYSEDFFDNVLHLTEWWSFFPKVAIDQATWGPLWNNTYILLLGLMKLDSWERIWGDMKRTTIPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDLVEIIWVTILANQASGDGHGA-----VHGEPD 327          
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: A0A7S2PLY5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PLY5_9STRA)

HSP 1 Score: 220 bits (561), Expect = 9.950e-68
Identity = 111/213 (52.11%), Postives = 139/213 (65.26%), Query Frame = 1
Query:    1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIF-DWIGWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAEQARSAEDPEMVEMEPDNGG 636
            + RGWTA E  +R+PVDNW +Y  +L   PI  KA TS TVY +GD  AQ  EG +  D+ R RV RS LAG + HGPLSHVWY+  E +F +   W   WW   PKV IDQ+ WGPFWN  YI  LG ++    + I   +  T +PL+++G++LWPLAH VTYGL+P ENRLLWVD VEI+WVTIL+  AAE A S  + E  + E  NGG
Sbjct:  114 MMRGWTAAEMAVRIPVDNWASYESILHAAPISTKAVTSATVYTIGDIIAQRTEGKSYGDLDRWRVLRSLLAGCIGHGPLSHVWYDWSEDVFTEQFHWTE-WWSFFPKVAIDQMTWGPFWNNTYILLLGIMQFRPLKDIWTEIKETTVPLIVSGLKLWPLAHCVTYGLVPVENRLLWVDLVEIVWVTILASAAAE-ASSGGNKESSQGE--NGG 322          
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Match: A0A448Z6W8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6W8_9STRA)

HSP 1 Score: 214 bits (545), Expect = 9.660e-66
Identity = 108/206 (52.43%), Postives = 136/206 (66.02%), Query Frame = 1
Query:    1 ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQTFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWI-GWNGYWWVAGPKVIIDQILWGPFWNAVYIWFLGTLK---KDSFETIREAVVSTALPLVLAGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAEQARSAEDPE 606
            + RGW+  E  LR+P+DNW +Y+ VL   PI  KA TS TVYA+GD+ AQ  EG  + ++ R R+ARS LAGLL HGP+SH WY   E +F  I      +W    K+ IDQ +WGPFWN  YI  LG +K   + SFE+I   +  T +PL+++G++LWPLAH VTYGLIP ENRLLWVD VEI WVTIL+  AA     A DPE
Sbjct:   79 MMRGWSLEEIALRIPLDNWNSYSAVLSKAPIPTKAATSATVYAIGDFIAQRAEGRTMGELDRPRLARSLLAGLLGHGPMSHFWYEASENVFQNILHLPSNFWGTAAKIGIDQTIWGPFWNNTYILMLGVMKNGRETSFESIWAEMKRTTIPLIVSGLKLWPLAHCVTYGLIPVENRLLWVDLVEIXWVTILATTAA-----AVDPE 279          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13611.2092.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KX44_9PHAE8.760e-10772.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C8Z2_9STRA6.270e-9461.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TQH1_9STRA1.080e-7756.77Peroxisomal membrane 22 kDa (Mpv17 pmp22) family p... [more]
B7G9T7_PHATC2.830e-7656.19Predicted protein (Fragment) n=3 Tax=Phaeodactylum... [more]
A0A7S1VV68_9STRA1.280e-7151.18Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2HYH1_9STRA2.240e-7054.69Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2LHE2_9STRA5.650e-7051.69Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A6V2I5L6_9STRA5.400e-6950.72Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2PLY5_9STRA9.950e-6852.11Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A448Z6W8_9STRA9.660e-6652.43Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig13611contigS-dermatodea_contig13611:1375..3489 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score322.4
Seed ortholog evalue1.6e-85
Seed eggNOG ortholog2880.D7G2C4
KEGG koko:K13348
KEGG Pathwayko04146,map04146
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005779,GO:0016020,GO:0016021,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0098588,GO:0098805
EggNOG free text desc.Belongs to the peroxisomal membrane protein PXMP2 4 family
EggNOG OGsKOG1944@1,KOG1944@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMpv17/PMP22
Ec32 orthologEc-16_001670.1
Exons3
Model size712
Cds size648
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig13611.2092.1prot_S-dermatodea_contig13611.2092.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig13611 1439..3489 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924291.4179535-UTR-S-dermatodea_contig13611:1374..14381622924291.4179535-UTR-S-dermatodea_contig13611:1374..1438Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13611 1375..1438 -
1694079155.4451404-UTR-S-dermatodea_contig13611:1374..14381694079155.4451404-UTR-S-dermatodea_contig13611:1374..1438Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig13611 1375..1438 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924291.4315274-CDS-S-dermatodea_contig13611:1438..15891622924291.4315274-CDS-S-dermatodea_contig13611:1438..1589Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13611 1439..1589 -
1694079155.4637172-CDS-S-dermatodea_contig13611:1438..15891694079155.4637172-CDS-S-dermatodea_contig13611:1438..1589Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13611 1439..1589 -
1622924291.4435627-CDS-S-dermatodea_contig13611:2441..26391622924291.4435627-CDS-S-dermatodea_contig13611:2441..2639Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13611 2442..2639 -
1694079155.4755442-CDS-S-dermatodea_contig13611:2441..26391694079155.4755442-CDS-S-dermatodea_contig13611:2441..2639Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13611 2442..2639 -
1622924291.4542556-CDS-S-dermatodea_contig13611:3190..34891622924291.4542556-CDS-S-dermatodea_contig13611:3190..3489Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13611 3191..3489 -
1694079155.4864063-CDS-S-dermatodea_contig13611:3190..34891694079155.4864063-CDS-S-dermatodea_contig13611:3190..3489Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig13611 3191..3489 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig13611.2092.1

>prot_S-dermatodea_contig13611.2092.1 ID=prot_S-dermatodea_contig13611.2092.1|Name=mRNA_S-dermatodea_contig13611.2092.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=216bp
ISRGWTAGEFFLRVPVDNWYAYTDVLRDNPILVKACTSGTVYALGDWTAQ
TFEGTALADIKRGRVARSALAGLLLHGPLSHVWYNVCEGIFDWIGWNGYW
WVAGPKVIIDQILWGPFWNAVYIWFLGTLKKDSFETIREAVVSTALPLVL
AGVRLWPLAHLVTYGLIPTENRLLWVDFVEILWVTILSKQAAEQARSAED
PEMVEMEPDNGGQVS*
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mRNA from alignment at S-dermatodea_contig13611:1375..3489-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig13611.2092.1 ID=mRNA_S-dermatodea_contig13611.2092.1|Name=mRNA_S-dermatodea_contig13611.2092.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2115bp|location=Sequence derived from alignment at S-dermatodea_contig13611:1375..3489- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATTTCGCGGGGTTGGACCGCGGGCGAGTTCTTCCTCCGGGTGCCCGTCGA CAACTGGTACGCATACACGGACGTGCTTCGGGACAACCCCATACTTGTAA AGGCGTGCACCAGCGGCACGGTCTACGCGCTAGGCGACTGGACTGCGCAA ACGTTCGAGGGAACAGCCCTGGCGGACATCAAGCGGGGGCGGGTTGCTCG TTCTGCGCTGGCGGGGCTGCTCCTTCACGGCCCCCTCAGCCACGTCTGGT ACAACGTGTGCGAGGGTATCTTCGACTGGATCGGGTGGAACGGATATTGG TGAGGGGACGTGGCTGGGTGGGTGGTTTCTCGTCGTCAACCAAGCGCGGG AGAAACGACGGTAGAGCTTTAAGAAATCTCTCTTCCCCCGGAGTCAGGCC ATGCGCTTGATTGGCACGCAAAAGTGGTGGAAGGGTGTGTCACCCTCCGT TCGGTGCCCCGCCGCGCACTAAAGACACGGCGGATTGCTGGGCCAGAGCG GTATCTGTGGCTTTTTCTACTTTGATTGATTGATATCGTCGCACGTATAT AACCGGTTGGTAGGCCTATCAAATGCTCAAAGAAAACAAATGGCTGCATA TAAAGAAGCTGCAGAAAGAGAACTTAAAAGGGTCGGCCTCCAGTGGTACC CAAACGCACAAGCCAACCAAACCCAAGGGTGAAATAGGAGTATTTTTCTC TTGGGGCCGCTTGTTCAATCCTCGGACGTGCCATCCGCGCGGCTCGACCC ACGCGGCTTTGTGCAAACCCGTTTTTTCGACCTCGTGGCCTCCTTTTTCG CTCCCGCTCTTTTTTGACGCACGATAAAAACTCATTGAAAAAACGCACAG GTGGGTCGCCGGGCCGAAGGTGATCATCGACCAGATCCTGTGGGGGCCTT TCTGGAACGCCGTGTACATCTGGTTCCTCGGCACGCTAAAGAAGGACTCT TTCGAGACTATCCGAGAAGCTGTCGTCAGTACCGCCCTGCCGTTAGTCTT GGCGGGCGTTCGCCTGTGGCCACTGGCGCACCTCGTCACCTACGGCTTGT GAGTCCAAACCCTTACAAGTATCAGTATAATATTGCATTGTACATATCTT GTGTTTTCCTTCCTGGTAAGCGTCAAAATGGGAACCAAAGCAGGCGAAGC GTCGAAATATATCGGGGTGTGAAAAAACCGACGCGCACGCGAAGGAGGGG TATAGCCCTTGAGGCGGCGAAGAGGAGCATGCACACCACGTGTCTTCCTG CCCCGACACGCTACCGCGTACGTTGCCCTGTAGCTTGCGCTACAGACTCA TCTCCTGGATCGGTTTGAGTGTGTCTCGGTACTGTACGGCAATACAGCTA CTGCTACCAGCAGAGTTGTGGGTAGAAAACGAAAACGGGCCGTTCCAGTG GGTCAACGGGTGGTCCTAGATGCGGTGCTTTCACCAGCTCGATTTGTGGG CTCAAGCGTATCCTTAACCGCCAGGGTTGTTATGGCCTCAAGCAAGGCTC GACACCGACGGCAAAAGGCCTGAAGTCTCAACCGGAAGCTCTTGGCACCA ATTGCTGCCAACAGAGCATGGTATCATAGGGCCGACCGGGGCATCCGATG ATGGTCATAACCCCCTCCCATACACACACACACACAGGATAGGAAACACA CTTTTGCGCCACCTTTTGGCAGAGTAGGAAGGACTGATTGACCATCGGCA TTCGATCCTGTGGGAACAATGCCCCGTCCTCTCGAGGACGCGTGGTCAAT GGTCTAACAGCTCAAGCATGCAAAACATGAGTACCTCTAAAAATGTAAAG ATTTATGTAAACAAGTATGAGTACCCCCCCACCCCCACCCCCGCCCACCC CCGCCACCTCCGAACTCCCTCCCCTACCACCGTTTCTTCGCCTCGCCTAG AATCCCAACAGAAAACCGCCTCCTGTGGGTCGACTTCGTTGAAATCCTTT GGGTGACGATCCTCAGCAAGCAGGCGGCAGAGCAGGCGCGCTCGGCGGAA GATCCGGAGATGGTGGAGATGGAACCGGATAATGGGGGGCAAGTTTCTTA GACAAGAGTTCCTGATTGCTGTTGATGCTGCCGGTGTCTTGTGGTTGATC GATCAAAGTAGACGG
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Coding sequence (CDS) from alignment at S-dermatodea_contig13611:1375..3489-

>mRNA_S-dermatodea_contig13611.2092.1 ID=mRNA_S-dermatodea_contig13611.2092.1|Name=mRNA_S-dermatodea_contig13611.2092.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1296bp|location=Sequence derived from alignment at S-dermatodea_contig13611:1375..3489- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATTTCGCGGGGTTGGACCGCGGGCGAGTTCTTCCTCCGGGTGCCCGTCGA
CAACTGGTACGCATACACGGACGTGCTTCGGGACAACCCCATACTTGTAA
AGGCGTGCACCAGCGGCACGGTCTACGCGCTAGGCGACTGGACTGCGCAA
ACGTTCGAGGGAACAGCCCTGGCGGACATCAAGCGGGGGCGGGTTGCTCG
TTCTGCGCTGGCGGGGCTGCTCCTTCACGGCCCCCTCAGCCACGTCTGGT
ACAACGTGTGCGAGGGTATCTTCGACTGGATCGGGTGGAACGGATATTGA
TTTCGCGGGGTTGGACCGCGGGCGAGTTCTTCCTCCGGGTGCCCGTCGAC
AACTGGTACGCATACACGGACGTGCTTCGGGACAACCCCATACTTGTAAA
GGCGTGCACCAGCGGCACGGTCTACGCGCTAGGCGACTGGACTGCGCAAA
CGTTCGAGGGAACAGCCCTGGCGGACATCAAGCGGGGGCGGGTTGCTCGT
TCTGCGCTGGCGGGGCTGCTCCTTCACGGCCCCCTCAGCCACGTCTGGTA
CAACGTGTGCGAGGGTATCTTCGACTGGATCGGGTGGAACGGATATTGGT
GGGTCGCCGGGCCGAAGGTGATCATCGACCAGATCCTGTGGGGGCCTTTC
TGGAACGCCGTGTACATCTGGTTCCTCGGCACGCTAAAGAAGGACTCTTT
CGAGACTATCCGAGAAGCTGTCGTCAGTACCGCCCTGCCGTTAGTCTTGG
CGGGCGTTCGCCTGTGGCCACTGGCGCACCTCGTCACCTACGGCTTGTGG
GTCGCCGGGCCGAAGGTGATCATCGACCAGATCCTGTGGGGGCCTTTCTG
GAACGCCGTGTACATCTGGTTCCTCGGCACGCTAAAGAAGGACTCTTTCG
AGACTATCCGAGAAGCTGTCGTCAGTACCGCCCTGCCGTTAGTCTTGGCG
GGCGTTCGCCTGTGGCCACTGGCGCACCTCGTCACCTACGGCTTAATCCC
AACAGAAAACCGCCTCCTGTGGGTCGACTTCGTTGAAATCCTTTGGGTGA
CGATCCTCAGCAAGCAGGCGGCAGAGCAGGCGCGCTCGGCGGAAGATCCG
GAGATGGTGGAGATGGAACCGGATAATGGGGGGCAAGTTTCTTAGAATCC
CAACAGAAAACCGCCTCCTGTGGGTCGACTTCGTTGAAATCCTTTGGGTG
ACGATCCTCAGCAAGCAGGCGGCAGAGCAGGCGCGCTCGGCGGAAGATCC
GGAGATGGTGGAGATGGAACCGGATAATGGGGGGCAAGTTTCTTAG
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