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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 492 |
| Cds size | 462 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622924290.481018-UTR-S-dermatodea_contig13597:4417..4447 | 1622924290.481018-UTR-S-dermatodea_contig13597:4417..4447 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig13597 4418..4447 - |
| 1694079154.6720088-UTR-S-dermatodea_contig13597:4417..4447 | 1694079154.6720088-UTR-S-dermatodea_contig13597:4417..4447 | Saccorhiza dermatodea SderLu1190fm monoicous | UTR | S-dermatodea_contig13597 4418..4447 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13597.2082.1 >prot_S-dermatodea_contig13597.2082.1 ID=prot_S-dermatodea_contig13597.2082.1|Name=mRNA_S-dermatodea_contig13597.2082.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=154bp
MFNWRSGANNALVPNESDEMALEFLYKHAGDVSRAEFHIATQVSSGAGVR
SLEVSEVKRGPPQQLSSWQSAYTKKLDALGFFDSSEAGSYTYPAELVRKN
VEPSSDEDDAAWDPEREEDGCDDVDDDEADETGDAEEEVAAVVAHVAPHD
LER* back to topmRNA from alignment at S-dermatodea_contig13597:2768..4447- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig13597.2082.1 ID=mRNA_S-dermatodea_contig13597.2082.1|Name=mRNA_S-dermatodea_contig13597.2082.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1680bp|location=Sequence derived from alignment at S-dermatodea_contig13597:2768..4447- (Saccorhiza dermatodea SderLu1190fm monoicous)
GGGCGCACTCTTGGGGACTACGATTCGGACATGTTCAACTGGCGAAGTGG
AGCGAACAATGCCCTAGTCCCGAACGAATCTGATGAGATGGCGCTGGAGT
TTCTCTACAAGCACGCCGGTGACGTCAGCCGGGCTGAATTTCACATAGCG
ACACAGGTCTCCTCCGGCGCAGGTGACCGCGCACGTCTCACTGCTGTGTA
CTTTGATGCTTTATCATGTGACAAACATCTTGCCGACCACGATACAGTAG
TACCTGGTACGTTTCTTCTCCACACCACCTTACGCGTGAGACGCGAAGAA
AGTCGAAACAAATAGTATGATATCATCGATTTACGTCTTGCTTGTATCAT
AGCTCTAGAACTCAAGTGTGCATACAGCAAGAGCCAGTTGTCTCTTCCTC
CGCCACAGCAGAGTATCCCTCCCTTCTACAGTAGTTGTCTCGCCTTTCCT
ACAAGTATTATAAAAGTCCAGTCTTCCCATCCCAGTCCATTGAAAAACCT
TCGTCTTCACATGTATTTTTTTGCCGACGATGACTGAAAAGAACAACGAG
ACTCAAAGACATCTTCTACATTTAACTCCCGCTCCGTTCCCATTTTCCTA
GTGTATTTTGCTCTCGTAAATCGACTTTGCCACGGGTCGCTGTAGAGCAC
AGATTGAGACGGAACCTTCGGCAATGACCTCTCCTTGGTCCACTTGGAAG
GTTTCGAGTGTGCCGAATTTTAGTTTGCGAAAAGAAAATGAAATCGGTTT
TGCGGTGGCCAAGGCTGCCTAGATTGAACATATTCCTTAGGAAAGCTGGG
TTTCACAGATATTTATCGATTTTGCCAGGTCGAACGGCCAAGTGTGACAC
GGTAGTGACCGGCCCAGACTGTAGAGTGGAGTCTTGGCTATCCATCGGTA
GTGTGCAGAATTTCAGTTCGGCAGTAGAAGCCGAGCTCCAGCTCGCTCGT
CCCTGTTTGGTATGATAAGGAAAAAACGTGTTGTGCTTCCACAGCTAGAT
TTTGAGCTTGTTGTTTGGTTCCAGAATTCGAAAAAAGGGCAAAAAAAACA
AAAAAAAACGTGTCTTGCTGTACCTCTGCCACGGTGTACCCCACGGGTTT
GAACGAGAATCGCAGTCGCCTGGATGTGTGCTGAATACATGTATTAATAT
TGATCAGTTTAGGTGCTTGCCAAACTTCTCACTGGTCTTTAAACTGGTCT
TGAATACACAGCACCAGTTTCGTAGATGTACGAATCACCGGATCCGTCAC
AAGGCACCTCCTCCTGTCCTCCGTTCAGACCGTACTGTGCTGCAACTGAA
CGCTCACGCCTTTACCGTCGATCACCTTCCGAAAATTCGGCGTGGCGGGG
GGGTATGCAGGTGTGCGTTCGCTCGAAGTAAGTGAGGTCAAACGTGGCCC
ACCCCAGCAGCTCTCTTCCTGGCAGTCTGCGTACACTAAGAAGTTGGACG
CCCTCGGGTTTTTCGACAGTTCTGAAGCTGGAAGCTACACGTACCCCGCT
GAACTGGTTCGCAAGAACGTAGAGCCCTCCTCGGATGAAGACGACGCCGC
GTGGGATCCAGAGCGAGAGGAGGATGGGTGTGACGATGTAGACGACGACG
AGGCTGACGAAACCGGCGACGCGGAGGAGGAGGTCGCCGCGGTCGTTGCT
CATGTTGCCCCACATGACTTAGAACGGTAG back to topCoding sequence (CDS) from alignment at S-dermatodea_contig13597:2768..4447- >mRNA_S-dermatodea_contig13597.2082.1 ID=mRNA_S-dermatodea_contig13597.2082.1|Name=mRNA_S-dermatodea_contig13597.2082.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=924bp|location=Sequence derived from alignment at S-dermatodea_contig13597:2768..4447- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGTTCAACTGGCGAAGTGGAGCGAACAATGCCCTAGTCCCGAACGAATC
TGATGAGATGGCGCTGGAGTTTCTCTACAAGCACGCCGGTGACGTCAGCC
GGGCTGAATTTCACATAGCGACACAGGTCTCCTCCGGCGCAGATGTTCAA
CTGGCGAAGTGGAGCGAACAATGCCCTAGTCCCGAACGAATCTGATGAGA
TGGCGCTGGAGTTTCTCTACAAGCACGCCGGTGACGTCAGCCGGGCTGAA
TTTCACATAGCGACACAGGTCTCCTCCGGCGCAGGTGTGCGTTCGCTCGA
AGTAAGTGAGGTCAAACGTGGCCCACCCCAGCAGCTCTCTTCCTGGCAGT
CTGCGTACACTAAGAAGTTGGACGCCCTCGGGTTTTTCGACAGTTCTGAA
GCTGGAAGCTACACGTACCCCGCTGAACTGGTTCGCAAGAACGTAGAGCC
CTCCTCGGATGAAGACGACGCCGCGTGGGATCCAGAGCGAGAGGAGGATG
GGTGTGACGATGTAGACGACGACGAGGCTGACGAAACCGGCGACGCGGAG
GAGGAGGTCGCCGCGGTCGTTGCTCATGTTGCCCCACATGACTTAGAACG
GTAGGTGTGCGTTCGCTCGAAGTAAGTGAGGTCAAACGTGGCCCACCCCA
GCAGCTCTCTTCCTGGCAGTCTGCGTACACTAAGAAGTTGGACGCCCTCG
GGTTTTTCGACAGTTCTGAAGCTGGAAGCTACACGTACCCCGCTGAACTG
GTTCGCAAGAACGTAGAGCCCTCCTCGGATGAAGACGACGCCGCGTGGGA
TCCAGAGCGAGAGGAGGATGGGTGTGACGATGTAGACGACGACGAGGCTG
ACGAAACCGGCGACGCGGAGGAGGAGGTCGCCGCGGTCGTTGCTCATGTT
GCCCCACATGACTTAGAACGGTAG back to top
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