mRNA_S-dermatodea_contig13569.2070.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig13569.2070.1 vs. uniprot
Match: D7G568_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G568_ECTSI) HSP 1 Score: 275 bits (703), Expect = 2.810e-89 Identity = 125/170 (73.53%), Postives = 144/170 (84.71%), Query Frame = 1
Query: 1 QYLLSNDIKQAAGGFKNGGSNPMYLGRRFRPKGDDNRIFNSGGASYVLNQASLRLLASHLDDPECQPHRKCSWEDVQVAECLRRQNVLAFDTRDAFGRERFHPFMPGHHLMYRTPVI---PDWYIEYSIGLKFGRECCSRNSLSFHYVKEDLMRRMYHLVYSCPKDGVDM 501
+YLLS+DIK+AAGGFK+GGS PMYLGRRFRPKG+++RIFNSGGA+Y+LNQ S+RLLASHLDDP C PH++CSWEDV VA CLR+ V+A DTRD GRERFHPF PG HLMYR P DWY++YSI LK GRECCSR SLSFHYV E+LMRR+YHLVYSCPK VD+
Sbjct: 218 KYLLSDDIKKAAGGFKDGGSVPMYLGRRFRPKGNNDRIFNSGGAAYLLNQKSVRLLASHLDDPSCHPHQQCSWEDVNVAACLRQHGVVAHDTRDGLGRERFHPFTPGQHLMYRVPKTNPEKDWYVDYSIDLKIGRECCSRYSLSFHYVDENLMRRLYHLVYSCPKAPVDL 387
BLAST of mRNA_S-dermatodea_contig13569.2070.1 vs. uniprot
Match: A0A6H5JMC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC5_9PHAE) HSP 1 Score: 235 bits (600), Expect = 2.180e-73 Identity = 114/177 (64.41%), Postives = 130/177 (73.45%), Query Frame = 1
Query: 1 QYLLSNDIKQAAGGFKNGGSNPMYLGRRFRPKGDDNRIFNSGGASYVLNQASLRLLASHLDDPECQPHRKCSWEDVQVAECLRRQNVLAFDTRDAFGRERFHPFMPGHHLMYRTPVIP-----------DWYIEYSIGLKFGRECCSRNSLSFHYVKEDLMRRMYHLVYSCPKDGVD 498
+YLLS+DI +AAGG NGG NPMYLGRR RP DD IFNSGGASYVLNQAS+RLLAS+LD+ CQPH+K SWEDV VA CL++ V+AFDTRD GRERFHP+ P H YR P+ P DWYI +I L FG E CS +SLSFHYV EDLMRR+YHLVYSC +D D
Sbjct: 242 KYLLSDDIMRAAGGRINGGPNPMYLGRRLRPFNDDEWIFNSGGASYVLNQASVRLLASYLDEDACQPHKKTSWEDVMVAMCLKKNGVVAFDTRDESGRERFHPYTPAVHFGYRMPMRPEDRFVSGIVVGDWYISMAIDLVFGLEGCSSDSLSFHYVDEDLMRRLYHLVYSCDRDPAD 418
BLAST of mRNA_S-dermatodea_contig13569.2070.1 vs. uniprot
Match: D7FK28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK28_ECTSI) HSP 1 Score: 234 bits (598), Expect = 2.500e-72 Identity = 115/177 (64.97%), Postives = 130/177 (73.45%), Query Frame = 1
Query: 1 QYLLSNDIKQAAGGFKNGGSNPMYLGRRFRPKGDDNRIFNSGGASYVLNQASLRLLASHLDDPECQPHRKCSWEDVQVAECLRRQNVLAFDTRDAFGRERFHPFMPGHHLMYRTPVIP-----------DWYIEYSIGLKFGRECCSRNSLSFHYVKEDLMRRMYHLVYSCPKDGVD 498
+YLLS++I AAGG NGG NPMYLGRR RP DD IFNSGGASYVLNQAS+ LLAS+LD+ CQPH+K SWEDV VA CL++ V+AFDTRDA GRERFHP+ P H YRTP+ P DWYI +I L FG E CS +SLSFHYV EDLMRR+YHLVYSC KD D
Sbjct: 294 KYLLSDEIMHAAGGGINGGPNPMYLGRRLRPFNDDEWIFNSGGASYVLNQASVGLLASYLDEDACQPHKKTSWEDVMVAMCLKKNGVVAFDTRDASGRERFHPYTPAVHFGYRTPMRPEDRLVSGIVVGDWYIGMAIDLIFGLEGCSSDSLSFHYVDEDLMRRLYHLVYSCGKDPAD 470
BLAST of mRNA_S-dermatodea_contig13569.2070.1 vs. uniprot
Match: D7FTE6_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTE6_ECTSI) HSP 1 Score: 227 bits (579), Expect = 2.030e-69 Identity = 105/177 (59.32%), Postives = 128/177 (72.32%), Query Frame = 1
Query: 1 QYLLSNDIKQAAGGFKNGGSNPMYLGRRFRPKGDDNRIFNSGGASYVLNQASLRLLASHLDDPECQPHRKCSWEDVQVAECLRRQNVLAFDTRDAFGRERFHPFMPGHHLMYRTPV-----------IPDWYIEYSIGLKFGRECCSRNSLSFHYVKEDLMRRMYHLVYSCPKDGVD 498
+YLLS ++K+AAGG +NGG+ P+YLGRR R GDDNRI+N+GGASYVLNQAS+ LLA HLDD +CQPH K WEDV + CL++ V FDTRD GRERFHPF PG H YR P + WY+ +I LKFGRECCS +S+SFHYV E LMRR++ L+Y CP+D VD
Sbjct: 320 KYLLSEEVKRAAGGLENGGTTPVYLGRRLRGFGDDNRIYNNGGASYVLNQASVGLLADHLDDDDCQPHTKKPWEDVLIGSCLKKNGVEPFDTRDNLGRERFHPFTPGAHFGYRKPPKLENRHVPGCKVGAWYLIQAIDLKFGRECCSDDSISFHYVDEQLMRRLHDLLYLCPEDEVD 496
BLAST of mRNA_S-dermatodea_contig13569.2070.1 vs. uniprot
Match: D7FK31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK31_ECTSI) HSP 1 Score: 224 bits (570), Expect = 6.620e-69 Identity = 102/179 (56.98%), Postives = 133/179 (74.30%), Query Frame = 1
Query: 1 QYLLSNDIKQAAGGFKNGGSNPMYLGRRFRPKGDDNRIFNSGGASYVLNQASLRLLASHLDDPECQPHRKCSWEDVQVAECLRRQNVLAFDTRDAFGRERFHPFMPGHHLMYRTPVIPD-----------WYIEYSIGLKFGRECCSRNSLSFHYVKEDLMRRMYHLVYSCPKDGVDMS 504
+YLLS++I +AAGG +NGG+NPM+LGRR + G+ +RI+N+GGASYV+NQAS+ LL +HLDD +CQPH K SWEDV V+ CL+ V+AFDTRD GRERFHPF P H+ YR P P+ WY +I L+FG ECCS++S+SFHY+ E LMRR+YHLVYSCP++ M+
Sbjct: 243 KYLLSDEIIRAAGGLQNGGTNPMFLGRRLQRFGEQHRIYNNGGASYVMNQASVGLLGNHLDDSQCQPHTKQSWEDVLVSRCLKVNGVMAFDTRDDLGRERFHPFSPAVHIGYRMPETPEDRLVSGFLVGGWYGIQAIELQFGLECCSQDSISFHYIDEQLMRRLYHLVYSCPEEAEGMN 421
BLAST of mRNA_S-dermatodea_contig13569.2070.1 vs. uniprot
Match: D7FK30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK30_ECTSI) HSP 1 Score: 221 bits (563), Expect = 9.890e-69 Identity = 108/177 (61.02%), Postives = 127/177 (71.75%), Query Frame = 1
Query: 1 QYLLSNDIKQAAGGFKNGGSNPMYLGRRFRPKGDDNRIFNSGGASYVLNQASLRLLASHLDDPECQPHRKCSWEDVQVAECLRRQNVLAFDTRDAFGRERFHPFMPGHHLMYRTP-----------VIPDWYIEYSIGLKFGRECCSRNSLSFHYVKEDLMRRMYHLVYSCPKDGVD 498
+YLLS++IK AAGG +NGG NPMYLGRRFR G+D RI+N+GG SYVLNQAS+ LLASHLDD CQPH WED+ VA CL++ V AFDTRDA GRERFHPF P H YR P V+ WYI I LKFGRECCS++SLSFHYV E + RR++ L+Y+CPK D
Sbjct: 168 KYLLSDEIKGAAGGLENGGPNPMYLGRRFRFIGED-RIYNNGGPSYVLNQASVGLLASHLDDDACQPHAAKHWEDILVAWCLKKNGVEAFDTRDALGRERFHPFTPAAHFGYRMPQKLEDRLVSGCVVGAWYIIQGIDLKFGRECCSQDSLSFHYVGEQVSRRLHDLIYACPKYQAD 343
BLAST of mRNA_S-dermatodea_contig13569.2070.1 vs. uniprot
Match: A0A6H5JVG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG9_9PHAE) HSP 1 Score: 214 bits (546), Expect = 3.060e-65 Identity = 101/186 (54.30%), Postives = 129/186 (69.35%), Query Frame = 1
Query: 4 YLLSNDIKQAAGGFKNGGSNPMYLGRRFRPKGDDNRIFNSGGASYVLNQASLRLLASHLDDPECQPHRKCSWEDV------------QVAECLRRQNVLAFDTRDAFGRERFHPFMPGHHLMYRTPVIPD-----------WYIEYSIGLKFGRECCSRNSLSFHYVKEDLMRRMYHLVYSCPKDG 492
YLLS++I +AAGG +NGG+NP++LGRR + G+ +RI+N+GGASYV+NQAS+ LL +HLDD CQPH K SWEDV +V+ CLR V+AFDTRD GRERFHPF P H+ YR P P+ WY +I L FG ECCS++S+SFHY+ E LMRR+YHLVYSCP++
Sbjct: 238 YLLSDEIIRAAGGLQNGGTNPIFLGRRLQRFGEQHRIYNNGGASYVMNQASVGLLGNHLDDSRCQPHAKQSWEDVLVSISRASFKKTEVSRCLRNNGVMAFDTRDGLGRERFHPFSPAVHIGYRMPETPEDRLVSGFLVGGWYGIQAIELTFGLECCSQDSISFHYIDEQLMRRLYHLVYSCPEEA 423
BLAST of mRNA_S-dermatodea_contig13569.2070.1 vs. uniprot
Match: D7FK39_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK39_ECTSI) HSP 1 Score: 213 bits (541), Expect = 2.650e-61 Identity = 101/176 (57.39%), Postives = 124/176 (70.45%), Query Frame = 1
Query: 1 QYLLSNDIKQAAGGFKNGGSNPMYLGRRFRPKGDDNRIFNSGGASYVLNQASLRLLASHLDDPECQPHRKCSWEDVQVAECLRRQNVLAFDTRDAFGRERFHPFMPGHHLMYRTPVIPD-----------WYIEYSIGLKFGRECCSRNSLSFHYVKEDLMRRMYHLVYSCPKDGV 495
+YLLS+++K A GG KNGG+NPMYLGRR R G+D+R++N+G ASYVLNQAS+ LLASHLDD +CQPHRK WED+ V+ CL++ V AFDTRD GRERFHPF P H P+ P WY++ + KFGRE S +SLSF+ V E LMRR+YHLVYSC D V
Sbjct: 310 KYLLSDEVKSAGGGIKNGGANPMYLGRRLRVFGEDHRMYNNGRASYVLNQASVGLLASHLDDDDCQPHRKTPWEDLLVSMCLKKNGVSAFDTRDTLGRERFHPFTPATHFGQHMPLDPADRLASGIVVNAWYMDQEVDAKFGREGYSSDSLSFNDVDEQLMRRLYHLVYSCQNDEV 485
BLAST of mRNA_S-dermatodea_contig13569.2070.1 vs. uniprot
Match: A0A6H5L1N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1N0_9PHAE) HSP 1 Score: 203 bits (516), Expect = 1.560e-58 Identity = 101/191 (52.88%), Postives = 124/191 (64.92%), Query Frame = 1
Query: 1 QYLLSNDIKQAAGGFKNGGSNPMYLGRRFRPKGDDNRIFNSGGASYVLNQASLRLLASHLDDPECQPHRKCSWEDVQVAECLRRQNVLAFDTRDAFGRERFHPFMPGHHLMYRT---------------PVIP-----------DWYIEYSIGLKFGRECCSRNSLSFHYVKEDLMRRMYHLVYSCPKDGV 495
+YLLS+++K A GG NGG+NPMYLGRR R G+D+R++N+G ASYVLNQAS+ LLASHLDD +CQPHRK WED+ V+ CL++ V AFDTRD GRERFHPF P H Y PV P WY++ + +KFGRE S +SLSF+ V E LM R+YHLVYSC D V
Sbjct: 334 KYLLSDEVKSAGGGINNGGTNPMYLGRRLRVFGEDHRMYNNGRASYVLNQASVGLLASHLDDDDCQPHRKTPWEDLLVSMCLKKNGVSAFDTRDTLGRERFHPFTPATHFGYEPIFFMNLYVDVFGQHMPVDPADRLASGIVVNGWYMDQEVDVKFGREGYSSDSLSFNDVDEQLMWRLYHLVYSCQNDEV 524
BLAST of mRNA_S-dermatodea_contig13569.2070.1 vs. uniprot
Match: A0A7S2SKC8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKC8_9STRA) HSP 1 Score: 181 bits (458), Expect = 6.730e-50 Identity = 89/162 (54.94%), Postives = 116/162 (71.60%), Query Frame = 1
Query: 4 YLLSNDIKQAAGGFKNGGSNPMYLGRRFRPKGDDNRIFNSGGASYVLNQASLRLLASH-LDDPECQPHRKCSWEDVQVAECLRR-QNVLAFDTRDAFGRERFHPFMPGHHLMYR-TPVIPDWYIEYSIGLKFGRECCSRNSLSFHYVKEDLMRRMYHLVYSC 480
YL S +I +A+ + G+ P++LGRRF G+ +RIFNSGG+ Y+LNQASLR+LA + D+ C PH K +EDV VA CLR+ V +DTRDA GRERFHPF P HL YR +P PDWY +YS LK G+ECCS +S++FHYVK LMRR++ L+Y+C
Sbjct: 629 YLNSKEIVEAS----DHGTRPLFLGRRFAQNGNKDRIFNSGGSGYILNQASLRILAENSADNAACNPHIKGFYEDVLVAACLRKVAQVFPYDTRDAHGRERFHPFTPAAHLSYRISPKNPDWYAKYSSDLKQGKECCSSHSIAFHYVKPQLMRRLHALLYAC 786 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig13569.2070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig13569.2070.1 >prot_S-dermatodea_contig13569.2070.1 ID=prot_S-dermatodea_contig13569.2070.1|Name=mRNA_S-dermatodea_contig13569.2070.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=173bp QYLLSNDIKQAAGGFKNGGSNPMYLGRRFRPKGDDNRIFNSGGASYVLNQback to top mRNA from alignment at S-dermatodea_contig13569:4092..6502- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig13569.2070.1 ID=mRNA_S-dermatodea_contig13569.2070.1|Name=mRNA_S-dermatodea_contig13569.2070.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2411bp|location=Sequence derived from alignment at S-dermatodea_contig13569:4092..6502- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig13569:4092..6502- >mRNA_S-dermatodea_contig13569.2070.1 ID=mRNA_S-dermatodea_contig13569.2070.1|Name=mRNA_S-dermatodea_contig13569.2070.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at S-dermatodea_contig13569:4092..6502- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |